BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00017470
         (1226 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   451   e-124
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              451   e-124
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [...   447   e-123
ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF,...   447   e-123
gb|EOY07878.1| RNA polymerase sigma factor rpoD, putative [Theob...   446   e-123
gb|EMJ06193.1| hypothetical protein PRUPE_ppa003513mg [Prunus pe...   445   e-122
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei...   441   e-121
ref|XP_002326192.1| predicted protein [Populus trichocarpa]           441   e-121
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,...   438   e-120
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,...   438   e-120
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,...   438   e-120
ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF,...   437   e-120
ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF,...   436   e-120
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr...   424   e-116
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr...   424   e-116
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr...   424   e-116
ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF,...   421   e-115
ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF,...   415   e-113
ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutr...   411   e-112
ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutr...   411   e-112

>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  451 bits (1159), Expect = e-124
 Identities = 228/335 (68%), Positives = 267/335 (79%)
 Frame = -1

Query: 1196 GSSEKTESRRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDFNKLVAVKGKLQ 1017
            GS      R+++EGYDP DPLRLFLWGPET++LLT +EE+ELI  IQ+  +L  VK +LQ
Sbjct: 240  GSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEVKKRLQ 299

Query: 1016 SQFDREPTFAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIAKQYQGRGLNLK 837
            S   REPT  EWA AVGLS   L+S++ S  RSR+KLI AN RMVV+IAKQYQGRGLNL+
Sbjct: 300  SHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGRGLNLQ 359

Query: 836  DLLQEGSMGLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIRLPENMYNLHAK 657
            DLLQEGSMGLM SVEKFKP AGCRF SYAYWWIRQ +RKAIFQHSRTIRLPENMY+L  K
Sbjct: 360  DLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGK 419

Query: 656  VLEARKSFIQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSVWTDQGITYQEV 477
            V EA++ FIQEGHH+PT EE+A RVGIT EKLQ LL   R PLSMQQ VW DQ  T+QEV
Sbjct: 420  VKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDTTFQEV 479

Query: 476  TADTNIENPDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGKRQSLSEIGALF 297
            TADT IE PDV   +QLMR+H+RNLL  LTP+E +I++LR+GIG G  +  +LSEIG +F
Sbjct: 480  TADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPR--TLSEIGLVF 537

Query: 296  GLSKERVRQIESRALLKLKESLNSHGLMAYTDLLL 192
            G SKERVRQ+E RAL KLK+ L+SHGL +YTDLL+
Sbjct: 538  GFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 572


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  451 bits (1159), Expect = e-124
 Identities = 228/335 (68%), Positives = 267/335 (79%)
 Frame = -1

Query: 1196 GSSEKTESRRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDFNKLVAVKGKLQ 1017
            GS      R+++EGYDP DPLRLFLWGPET++LLT +EE+ELI  IQ+  +L  VK +LQ
Sbjct: 229  GSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEVKKRLQ 288

Query: 1016 SQFDREPTFAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIAKQYQGRGLNLK 837
            S   REPT  EWA AVGLS   L+S++ S  RSR+KLI AN RMVV+IAKQYQGRGLNL+
Sbjct: 289  SHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGRGLNLQ 348

Query: 836  DLLQEGSMGLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIRLPENMYNLHAK 657
            DLLQEGSMGLM SVEKFKP AGCRF SYAYWWIRQ +RKAIFQHSRTIRLPENMY+L  K
Sbjct: 349  DLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGK 408

Query: 656  VLEARKSFIQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSVWTDQGITYQEV 477
            V EA++ FIQEGHH+PT EE+A RVGIT EKLQ LL   R PLSMQQ VW DQ  T+QEV
Sbjct: 409  VKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDTTFQEV 468

Query: 476  TADTNIENPDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGKRQSLSEIGALF 297
            TADT IE PDV   +QLMR+H+RNLL  LTP+E +I++LR+GIG G  +  +LSEIG +F
Sbjct: 469  TADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPR--TLSEIGLVF 526

Query: 296  GLSKERVRQIESRALLKLKESLNSHGLMAYTDLLL 192
            G SKERVRQ+E RAL KLK+ L+SHGL +YTDLL+
Sbjct: 527  GFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 561


>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 548

 Score =  447 bits (1150), Expect = e-123
 Identities = 223/346 (64%), Positives = 275/346 (79%), Gaps = 1/346 (0%)
 Frame = -1

Query: 1226 SSTPRVNYELGSSEKTE-SRRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDF 1050
            + T  + +E  SS +    ++++EG+DP DPLRLFLWGPETKQLLT +EE+ELIG +QD 
Sbjct: 205  TKTKEIFHEPYSSRRAGVQKKINEGFDPKDPLRLFLWGPETKQLLTAKEESELIGQVQDL 264

Query: 1049 NKLVAVKGKLQSQFDREPTFAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIA 870
              L  VK K + QF R+PT  EWA AVGLS   ++S++ S  RSREKLINAN RMVV+IA
Sbjct: 265  MSLENVKEKFKLQFGRDPTLVEWADAVGLSYSVMQSQLHSGNRSREKLINANLRMVVHIA 324

Query: 869  KQYQGRGLNLKDLLQEGSMGLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIR 690
            KQYQGRGL+L+DLLQEGSMGLMKS+EKFKPQ GCRF +YAYWWIRQ +RKAIFQHSRTIR
Sbjct: 325  KQYQGRGLSLQDLLQEGSMGLMKSIEKFKPQVGCRFATYAYWWIRQTVRKAIFQHSRTIR 384

Query: 689  LPENMYNLHAKVLEARKSFIQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSV 510
            LPEN+Y+   KV EA++S+I EG+HNPT EELA R+GIT  +L+ LL + R PLSMQQ+V
Sbjct: 385  LPENVYHTLGKVSEAKRSYIMEGNHNPTKEELAKRIGITTVRLERLLYMARMPLSMQQTV 444

Query: 509  WTDQGITYQEVTADTNIENPDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGK 330
            W DQ  T+QE+TAD  +E P++C  +QLMRKH+ +LL  L PRE KI++LRYGI    GK
Sbjct: 445  WADQETTFQEITADIEVEIPELCVAKQLMRKHVLSLLNILNPRERKIIRLRYGIED--GK 502

Query: 329  RQSLSEIGALFGLSKERVRQIESRALLKLKESLNSHGLMAYTDLLL 192
            ++SLSEIG++FGLSKERVRQ+ESRAL KLK+ L SHGL AY DLL+
Sbjct: 503  KKSLSEIGSVFGLSKERVRQLESRALYKLKQCLASHGLEAYADLLV 548


>ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 554

 Score =  447 bits (1149), Expect = e-123
 Identities = 230/340 (67%), Positives = 271/340 (79%), Gaps = 1/340 (0%)
 Frame = -1

Query: 1208 NYELGSSEKTESRR-LSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDFNKLVAV 1032
            NYE  SS  ++ RR   EG +PNDPLRLFLWGPET+QLLT++EE ELI  +QD  KL AV
Sbjct: 217  NYENSSSNSSDLRRKYREGLNPNDPLRLFLWGPETRQLLTLKEETELIARVQDVFKLEAV 276

Query: 1031 KGKLQSQFDREPTFAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIAKQYQGR 852
            K +LQSQF REPT  EWA AVG+S   L+S++     SREKLI +N RMVV+IAKQYQGR
Sbjct: 277  KSRLQSQFGREPTLIEWAEAVGISCQMLQSQLRCGTSSREKLIYSNLRMVVHIAKQYQGR 336

Query: 851  GLNLKDLLQEGSMGLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIRLPENMY 672
            GL L+DLLQEGSMGLMKSVEKFKPQAGCRF +YAYWW+RQ IRKAIFQHSRTIRLPEN+Y
Sbjct: 337  GLGLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWVRQTIRKAIFQHSRTIRLPENVY 396

Query: 671  NLHAKVLEARKSFIQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSVWTDQGI 492
             L  KVLEA+KS+IQEG+ NP+ EELA RVG++ EKL  LL   R P+SMQQ+VW DQ  
Sbjct: 397  TLLGKVLEAKKSYIQEGNQNPSREELARRVGMSVEKLGKLLYCTRMPVSMQQTVWADQDT 456

Query: 491  TYQEVTADTNIENPDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGKRQSLSE 312
            T+QEVTADT IE PD+   +QLMR+H+RNLL +L  RE +I++LRYGI    GK++SL+E
Sbjct: 457  TFQEVTADTGIEIPDLSVAKQLMRQHVRNLLHTLEKRERQIIRLRYGIED--GKQRSLTE 514

Query: 311  IGALFGLSKERVRQIESRALLKLKESLNSHGLMAYTDLLL 192
            IG +FGLSKERVRQ+ESRA LKLKESL S GL AY  LL+
Sbjct: 515  IGEIFGLSKERVRQLESRAFLKLKESLGSQGLGAYAPLLV 554


>gb|EOY07878.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
          Length = 568

 Score =  446 bits (1147), Expect = e-123
 Identities = 229/338 (67%), Positives = 269/338 (79%), Gaps = 1/338 (0%)
 Frame = -1

Query: 1202 ELGSSEKTESRR-LSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDFNKLVAVKG 1026
            E  SS +T+ RR LSEG+DPNDPLRLFLWGPETKQLLT +EE+EL   +Q+  +L  VK 
Sbjct: 233  ETYSSRRTDVRRKLSEGFDPNDPLRLFLWGPETKQLLTAKEESELSNQVQNLMRLEKVKS 292

Query: 1025 KLQSQFDREPTFAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIAKQYQGRGL 846
            KLQSQF REPT  EWA A+GL   AL++E+ S   SR+KLI AN RMVV+IAKQYQ RGL
Sbjct: 293  KLQSQFGREPTLVEWAEAIGLRCSALQAELHSGNSSRDKLIYANLRMVVHIAKQYQSRGL 352

Query: 845  NLKDLLQEGSMGLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIRLPENMYNL 666
            +L+DLLQEGSMGLMKSVE+FKPQ GCRF +YAYWWIRQ IRK+I QHSRT+RLPEN++ L
Sbjct: 353  SLQDLLQEGSMGLMKSVERFKPQVGCRFATYAYWWIRQTIRKSIMQHSRTVRLPENVHTL 412

Query: 665  HAKVLEARKSFIQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSVWTDQGITY 486
             +KVL+A+KS+I+EG+H P+ EELA RVGIT EKL  LL   R PLSMQQSVW DQ IT+
Sbjct: 413  LSKVLDAKKSYIREGNHCPSKEELARRVGITVEKLDKLLFTTRMPLSMQQSVWVDQDITF 472

Query: 485  QEVTADTNIENPDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGKRQSLSEIG 306
            QEVT DT IE PDV   +QLMR+H+RNLL  L+PRE  I+KLR+GI     K  SLSEIG
Sbjct: 473  QEVTPDTGIEIPDVSVAKQLMRQHVRNLLSVLSPRERTIIKLRFGIEE--SKENSLSEIG 530

Query: 305  ALFGLSKERVRQIESRALLKLKESLNSHGLMAYTDLLL 192
             +FGLSKERVRQ+ESRAL KLK+ LN HGL AY DLL+
Sbjct: 531  NMFGLSKERVRQLESRALYKLKQCLNKHGLGAYVDLLV 568


>gb|EMJ06193.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
          Length = 568

 Score =  445 bits (1145), Expect = e-122
 Identities = 225/327 (68%), Positives = 265/327 (81%)
 Frame = -1

Query: 1172 RRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDFNKLVAVKGKLQSQFDREPT 993
            +++SEG++PNDPLRLFLWGPET+QLLT +EE ELI  +QD  KL  VK +LQ+QF REPT
Sbjct: 244  KKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLFKLEEVKSRLQTQFGREPT 303

Query: 992  FAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIAKQYQGRGLNLKDLLQEGSM 813
              EWA AVG+S   L+S++ S   SREKLI AN RMVV+IAKQYQGRGL L+DL+QEGSM
Sbjct: 304  LIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQEGSM 363

Query: 812  GLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIRLPENMYNLHAKVLEARKSF 633
            GLMKSVEKFKPQAGCRF +YAYWWIRQ +RKAIFQHSRTIRLPEN+Y+L  KVLEA+KS 
Sbjct: 364  GLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEAKKSC 423

Query: 632  IQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSVWTDQGITYQEVTADTNIEN 453
            IQEG+HNP  EELA RVGIT EKL+ LL   R PLSMQQ VW DQ  T+QEVTADT +E 
Sbjct: 424  IQEGNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQQPVWADQDTTFQEVTADTGVEI 483

Query: 452  PDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGKRQSLSEIGALFGLSKERVR 273
            PDV   +QLMR+H+R+LL  L  RE +I++LRYGI    GK++SLSEIG +FGLSKERVR
Sbjct: 484  PDVSVAKQLMRQHVRHLLSILNLREREIIRLRYGIED--GKQRSLSEIGGMFGLSKERVR 541

Query: 272  QIESRALLKLKESLNSHGLMAYTDLLL 192
            Q+ESRA LKL++SL S GL AY  LL+
Sbjct: 542  QLESRAFLKLRQSLGSQGLGAYGPLLV 568


>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
            gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
            FACTOR family protein [Populus trichocarpa]
          Length = 535

 Score =  441 bits (1135), Expect = e-121
 Identities = 221/326 (67%), Positives = 265/326 (81%)
 Frame = -1

Query: 1172 RRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDFNKLVAVKGKLQSQFDREPT 993
            +RLS+G+DPNDPLRLFLWGPETKQLLT +EE ELI  IQD   L  VK +L+SQF REPT
Sbjct: 211  KRLSQGFDPNDPLRLFLWGPETKQLLTAKEEFELIAQIQDLMNLEGVKNRLESQFGREPT 270

Query: 992  FAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIAKQYQGRGLNLKDLLQEGSM 813
              EWA AVGLS   L+ ++ S  RSREKLINAN RMVV+IAK+YQ RGL L+DLLQEG++
Sbjct: 271  LVEWAQAVGLSCHVLKLQLHSGNRSREKLINANLRMVVHIAKRYQNRGLGLQDLLQEGTV 330

Query: 812  GLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIRLPENMYNLHAKVLEARKSF 633
            GLMKS+EKFKPQAGCRF +YAYWWIRQ I KAIFQHSRTIRLPEN+Y L  KV+EA++S+
Sbjct: 331  GLMKSIEKFKPQAGCRFATYAYWWIRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSY 390

Query: 632  IQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSVWTDQGITYQEVTADTNIEN 453
            IQEG+H PT+EE+A RVGI  +KL+ LL   R PLSMQQ+VW+DQ  T+QE+TADT IE 
Sbjct: 391  IQEGNHQPTAEEIARRVGIAIDKLEKLLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEI 450

Query: 452  PDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGKRQSLSEIGALFGLSKERVR 273
            PD+   +QLMRKHIR LL  L+ +E +I++LR+GI    GK++SLSEIG +FGLSKERVR
Sbjct: 451  PDMSVAKQLMRKHIRGLLNILSLKERRIIRLRFGIED--GKQKSLSEIGNVFGLSKERVR 508

Query: 272  QIESRALLKLKESLNSHGLMAYTDLL 195
            Q+ESRAL KLK+ + SHGL AY DLL
Sbjct: 509  QLESRALYKLKQCVGSHGLDAYADLL 534


>ref|XP_002326192.1| predicted protein [Populus trichocarpa]
          Length = 535

 Score =  441 bits (1135), Expect = e-121
 Identities = 221/326 (67%), Positives = 265/326 (81%)
 Frame = -1

Query: 1172 RRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDFNKLVAVKGKLQSQFDREPT 993
            +RLS+G+DPNDPLRLFLWGPETKQLLT +EE ELI  IQD   L  VK +L+SQF REPT
Sbjct: 211  KRLSQGFDPNDPLRLFLWGPETKQLLTAKEEFELIAQIQDLMNLEGVKNRLESQFGREPT 270

Query: 992  FAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIAKQYQGRGLNLKDLLQEGSM 813
              EWA AVGLS   L+ ++ S  RSREKLINAN RMVV+IAK+YQ RGL L+DLLQEG++
Sbjct: 271  LVEWAQAVGLSCHVLKLQLHSGNRSREKLINANLRMVVHIAKRYQNRGLGLQDLLQEGTV 330

Query: 812  GLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIRLPENMYNLHAKVLEARKSF 633
            GLMKS+EKFKPQAGCRF +YAYWWIRQ I KAIFQHSRTIRLPEN+Y L  KV+EA++S+
Sbjct: 331  GLMKSIEKFKPQAGCRFATYAYWWIRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSY 390

Query: 632  IQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSVWTDQGITYQEVTADTNIEN 453
            IQEG+H PT+EE+A RVGI  +KL+ LL   R PLSMQQ+VW+DQ  T+QE+TADT IE 
Sbjct: 391  IQEGNHQPTAEEIARRVGIAIDKLEKLLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEI 450

Query: 452  PDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGKRQSLSEIGALFGLSKERVR 273
            PD+   +QLMRKHIR LL  L+ +E +I++LR+GI    GK++SLSEIG +FGLSKERVR
Sbjct: 451  PDMSVAKQLMRKHIRGLLNILSLKERRIIRLRFGIED--GKQKSLSEIGNVFGLSKERVR 508

Query: 272  QIESRALLKLKESLNSHGLMAYTDLL 195
            Q+ESRAL KLK+ + SHGL AY DLL
Sbjct: 509  QLESRALYKLKQCVGSHGLDAYADLL 534


>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X3 [Citrus sinensis]
          Length = 561

 Score =  438 bits (1127), Expect = e-120
 Identities = 223/346 (64%), Positives = 270/346 (78%), Gaps = 2/346 (0%)
 Frame = -1

Query: 1223 STPRV-NYELGSSEKTE-SRRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDF 1050
            S P+V N+E  +S K    ++LSEG+D NDPLRLFLWGPET++LLT  EE ELI  IQD 
Sbjct: 218  SKPKVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDL 277

Query: 1049 NKLVAVKGKLQSQFDREPTFAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIA 870
             +L   K KLQSQF REPT  EWA A+GLS   L+SE+ S   SREKLINAN R+VV++A
Sbjct: 278  IRLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVA 337

Query: 869  KQYQGRGLNLKDLLQEGSMGLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIR 690
            KQYQGRG+ L DLLQEGSMGLMKSVEKFKPQAGCRF SYAYWW+RQ IRKAIFQHSRTIR
Sbjct: 338  KQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIR 397

Query: 689  LPENMYNLHAKVLEARKSFIQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSV 510
            LPEN+Y L ++VLEA++ +IQEG+H+P  E+LA RVGIT EKL+ L+ + R PLSMQQ V
Sbjct: 398  LPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPV 457

Query: 509  WTDQGITYQEVTADTNIENPDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGK 330
            W DQ  T+QE+TADT +E PD+  ++QLMR+H+RNLL  L P+E  IV+LR+GI    GK
Sbjct: 458  WADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIED--GK 515

Query: 329  RQSLSEIGALFGLSKERVRQIESRALLKLKESLNSHGLMAYTDLLL 192
             +SLSE+G +FGLSKERVRQ+ESRAL +LK+SL       Y DLL+
Sbjct: 516  PKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 561


>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X2 [Citrus sinensis]
          Length = 569

 Score =  438 bits (1127), Expect = e-120
 Identities = 223/346 (64%), Positives = 270/346 (78%), Gaps = 2/346 (0%)
 Frame = -1

Query: 1223 STPRV-NYELGSSEKTE-SRRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDF 1050
            S P+V N+E  +S K    ++LSEG+D NDPLRLFLWGPET++LLT  EE ELI  IQD 
Sbjct: 226  SKPKVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDL 285

Query: 1049 NKLVAVKGKLQSQFDREPTFAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIA 870
             +L   K KLQSQF REPT  EWA A+GLS   L+SE+ S   SREKLINAN R+VV++A
Sbjct: 286  IRLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVA 345

Query: 869  KQYQGRGLNLKDLLQEGSMGLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIR 690
            KQYQGRG+ L DLLQEGSMGLMKSVEKFKPQAGCRF SYAYWW+RQ IRKAIFQHSRTIR
Sbjct: 346  KQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIR 405

Query: 689  LPENMYNLHAKVLEARKSFIQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSV 510
            LPEN+Y L ++VLEA++ +IQEG+H+P  E+LA RVGIT EKL+ L+ + R PLSMQQ V
Sbjct: 406  LPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPV 465

Query: 509  WTDQGITYQEVTADTNIENPDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGK 330
            W DQ  T+QE+TADT +E PD+  ++QLMR+H+RNLL  L P+E  IV+LR+GI    GK
Sbjct: 466  WADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIED--GK 523

Query: 329  RQSLSEIGALFGLSKERVRQIESRALLKLKESLNSHGLMAYTDLLL 192
             +SLSE+G +FGLSKERVRQ+ESRAL +LK+SL       Y DLL+
Sbjct: 524  PKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 569


>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X1 [Citrus sinensis]
          Length = 570

 Score =  438 bits (1127), Expect = e-120
 Identities = 223/346 (64%), Positives = 270/346 (78%), Gaps = 2/346 (0%)
 Frame = -1

Query: 1223 STPRV-NYELGSSEKTE-SRRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDF 1050
            S P+V N+E  +S K    ++LSEG+D NDPLRLFLWGPET++LLT  EE ELI  IQD 
Sbjct: 227  SKPKVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDL 286

Query: 1049 NKLVAVKGKLQSQFDREPTFAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIA 870
             +L   K KLQSQF REPT  EWA A+GLS   L+SE+ S   SREKLINAN R+VV++A
Sbjct: 287  IRLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVA 346

Query: 869  KQYQGRGLNLKDLLQEGSMGLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIR 690
            KQYQGRG+ L DLLQEGSMGLMKSVEKFKPQAGCRF SYAYWW+RQ IRKAIFQHSRTIR
Sbjct: 347  KQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIR 406

Query: 689  LPENMYNLHAKVLEARKSFIQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSV 510
            LPEN+Y L ++VLEA++ +IQEG+H+P  E+LA RVGIT EKL+ L+ + R PLSMQQ V
Sbjct: 407  LPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPV 466

Query: 509  WTDQGITYQEVTADTNIENPDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGK 330
            W DQ  T+QE+TADT +E PD+  ++QLMR+H+RNLL  L P+E  IV+LR+GI    GK
Sbjct: 467  WADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIED--GK 524

Query: 329  RQSLSEIGALFGLSKERVRQIESRALLKLKESLNSHGLMAYTDLLL 192
             +SLSE+G +FGLSKERVRQ+ESRAL +LK+SL       Y DLL+
Sbjct: 525  PKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 570


>ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Solanum lycopersicum]
          Length = 563

 Score =  437 bits (1125), Expect = e-120
 Identities = 220/326 (67%), Positives = 270/326 (82%)
 Frame = -1

Query: 1172 RRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDFNKLVAVKGKLQSQFDREPT 993
            R+++E  D NDPLR+FLWGPETKQLLT +EE+ELI  IQ   KL  VK +LQ QF REPT
Sbjct: 239  RKVNESIDLNDPLRMFLWGPETKQLLTAKEESELIVKIQISMKLQEVKHQLQIQFAREPT 298

Query: 992  FAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIAKQYQGRGLNLKDLLQEGSM 813
              EWA A G++S  L+S++LS K SREKLINAN RMVV+IAKQYQGRGLNL+DLLQEGSM
Sbjct: 299  SLEWAEAAGITSRELKSQLLSGKSSREKLINANLRMVVHIAKQYQGRGLNLQDLLQEGSM 358

Query: 812  GLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIRLPENMYNLHAKVLEARKSF 633
            GLMKSVEKFKPQAGCRFP+YAYWWIRQ +RKAIFQHSRTIRLPEN+Y L +KV +A++  
Sbjct: 359  GLMKSVEKFKPQAGCRFPTYAYWWIRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKREC 418

Query: 632  IQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSVWTDQGITYQEVTADTNIEN 453
            I++G+ +PT E++A   G++ E+LQNLLS +R PLSMQQSVW+DQ  T+QE+TAD  IE 
Sbjct: 419  IRQGNRHPTKEDIASCAGMSVERLQNLLSNVRTPLSMQQSVWSDQDTTFQEITADNAIEA 478

Query: 452  PDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGKRQSLSEIGALFGLSKERVR 273
            P++   +QLMR+HIR LL  L+P+E KI++LR+GIG   GK +SLSEIGA+FGLSKERVR
Sbjct: 479  PELSVSKQLMRRHIRGLLNVLSPKERKIIRLRFGIGD--GKPKSLSEIGAVFGLSKERVR 536

Query: 272  QIESRALLKLKESLNSHGLMAYTDLL 195
            Q+E+RAL KLK++LN HGL AY+DLL
Sbjct: 537  QLETRALYKLKQNLNKHGLDAYSDLL 562


>ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Solanum tuberosum]
          Length = 562

 Score =  436 bits (1121), Expect = e-120
 Identities = 220/326 (67%), Positives = 267/326 (81%)
 Frame = -1

Query: 1172 RRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDFNKLVAVKGKLQSQFDREPT 993
            R+++E  D NDPLR+FLWGPETKQLLT +EE+ELI  IQ   KL  VK +LQ QF  EPT
Sbjct: 238  RKVNESIDLNDPLRMFLWGPETKQLLTAKEESELIVKIQISMKLQEVKHQLQIQFAHEPT 297

Query: 992  FAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIAKQYQGRGLNLKDLLQEGSM 813
              EWA A G++S  L+S++LS K SREKLINAN RMVV+IAKQYQGRGLNL+DLLQEGSM
Sbjct: 298  SVEWAEAAGITSRELKSQLLSGKSSREKLINANLRMVVHIAKQYQGRGLNLQDLLQEGSM 357

Query: 812  GLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIRLPENMYNLHAKVLEARKSF 633
            GLMKSVEKFKPQAGCRFP+YAYWWIRQ +RKAIFQHSRTIRLPEN+Y L +KV +A+K  
Sbjct: 358  GLMKSVEKFKPQAGCRFPTYAYWWIRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKKEC 417

Query: 632  IQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSVWTDQGITYQEVTADTNIEN 453
            IQ+G+  PT E++A   G++ E+LQNLLS +R PLSMQQSVW+DQ  T+QE+TAD  IE 
Sbjct: 418  IQQGNRYPTKEDIASCAGMSVERLQNLLSNVRTPLSMQQSVWSDQDTTFQEITADNAIEA 477

Query: 452  PDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGKRQSLSEIGALFGLSKERVR 273
            P++   +QLMR+HIR LL  L+P+E KI++LR+GIG   GK +SLSEIG +FGLSKERVR
Sbjct: 478  PELSVSKQLMRRHIRGLLNVLSPKERKIIRLRFGIGD--GKPKSLSEIGTVFGLSKERVR 535

Query: 272  QIESRALLKLKESLNSHGLMAYTDLL 195
            Q+E+RAL KLK++LN HGL AY+DLL
Sbjct: 536  QLETRALYKLKQNLNKHGLDAYSDLL 561


>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530789|gb|ESR41972.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 561

 Score =  424 bits (1090), Expect = e-116
 Identities = 219/346 (63%), Positives = 265/346 (76%), Gaps = 2/346 (0%)
 Frame = -1

Query: 1223 STPRV-NYELGSSEKTE-SRRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDF 1050
            S P+V N+E  +S K    ++LSEG+DPNDPLRLFLWGPET++LLT  EE ELI  IQD 
Sbjct: 218  SKPKVTNHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDL 277

Query: 1049 NKLVAVKGKLQSQFDREPTFAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIA 870
             +L   K KLQSQF REPT         LS   L+SE+ S   SREKLINAN R+VV++A
Sbjct: 278  IRLEKEKSKLQSQFGREPTLILKLLRFHLSCRDLKSELHSGNSSREKLINANLRLVVHVA 337

Query: 869  KQYQGRGLNLKDLLQEGSMGLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIR 690
            KQYQGRG+ L DLLQEGSMGLMKSVEKFKPQAGCRF SYAYWW+RQ IRKAIFQHSRTIR
Sbjct: 338  KQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIR 397

Query: 689  LPENMYNLHAKVLEARKSFIQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSV 510
            LPEN+Y L ++VLEA++ +IQEG+H+P  E+LA RVGIT EKL+ L+ + R PLSMQQ V
Sbjct: 398  LPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPV 457

Query: 509  WTDQGITYQEVTADTNIENPDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGK 330
            W DQ  T+QE+TADT +E PD+  ++QLMR+H+RNLL  L P+E  IV+LR+GI    GK
Sbjct: 458  WADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIED--GK 515

Query: 329  RQSLSEIGALFGLSKERVRQIESRALLKLKESLNSHGLMAYTDLLL 192
             +SLSE+G +FGLSKERVRQ+ESRAL +LK+SL       Y DLL+
Sbjct: 516  PKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 561


>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530788|gb|ESR41971.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 569

 Score =  424 bits (1090), Expect = e-116
 Identities = 219/346 (63%), Positives = 265/346 (76%), Gaps = 2/346 (0%)
 Frame = -1

Query: 1223 STPRV-NYELGSSEKTE-SRRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDF 1050
            S P+V N+E  +S K    ++LSEG+DPNDPLRLFLWGPET++LLT  EE ELI  IQD 
Sbjct: 226  SKPKVTNHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDL 285

Query: 1049 NKLVAVKGKLQSQFDREPTFAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIA 870
             +L   K KLQSQF REPT         LS   L+SE+ S   SREKLINAN R+VV++A
Sbjct: 286  IRLEKEKSKLQSQFGREPTLILKLLRFHLSCRDLKSELHSGNSSREKLINANLRLVVHVA 345

Query: 869  KQYQGRGLNLKDLLQEGSMGLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIR 690
            KQYQGRG+ L DLLQEGSMGLMKSVEKFKPQAGCRF SYAYWW+RQ IRKAIFQHSRTIR
Sbjct: 346  KQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIR 405

Query: 689  LPENMYNLHAKVLEARKSFIQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSV 510
            LPEN+Y L ++VLEA++ +IQEG+H+P  E+LA RVGIT EKL+ L+ + R PLSMQQ V
Sbjct: 406  LPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPV 465

Query: 509  WTDQGITYQEVTADTNIENPDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGK 330
            W DQ  T+QE+TADT +E PD+  ++QLMR+H+RNLL  L P+E  IV+LR+GI    GK
Sbjct: 466  WADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIED--GK 523

Query: 329  RQSLSEIGALFGLSKERVRQIESRALLKLKESLNSHGLMAYTDLLL 192
             +SLSE+G +FGLSKERVRQ+ESRAL +LK+SL       Y DLL+
Sbjct: 524  PKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 569


>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530787|gb|ESR41970.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 558

 Score =  424 bits (1090), Expect = e-116
 Identities = 219/346 (63%), Positives = 265/346 (76%), Gaps = 2/346 (0%)
 Frame = -1

Query: 1223 STPRV-NYELGSSEKTE-SRRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDF 1050
            S P+V N+E  +S K    ++LSEG+DPNDPLRLFLWGPET++LLT  EE ELI  IQD 
Sbjct: 215  SKPKVTNHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDL 274

Query: 1049 NKLVAVKGKLQSQFDREPTFAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIA 870
             +L   K KLQSQF REPT         LS   L+SE+ S   SREKLINAN R+VV++A
Sbjct: 275  IRLEKEKSKLQSQFGREPTLILKLLRFHLSCRDLKSELHSGNSSREKLINANLRLVVHVA 334

Query: 869  KQYQGRGLNLKDLLQEGSMGLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIR 690
            KQYQGRG+ L DLLQEGSMGLMKSVEKFKPQAGCRF SYAYWW+RQ IRKAIFQHSRTIR
Sbjct: 335  KQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIR 394

Query: 689  LPENMYNLHAKVLEARKSFIQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSV 510
            LPEN+Y L ++VLEA++ +IQEG+H+P  E+LA RVGIT EKL+ L+ + R PLSMQQ V
Sbjct: 395  LPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPV 454

Query: 509  WTDQGITYQEVTADTNIENPDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGK 330
            W DQ  T+QE+TADT +E PD+  ++QLMR+H+RNLL  L P+E  IV+LR+GI    GK
Sbjct: 455  WADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIED--GK 512

Query: 329  RQSLSEIGALFGLSKERVRQIESRALLKLKESLNSHGLMAYTDLLL 192
             +SLSE+G +FGLSKERVRQ+ESRAL +LK+SL       Y DLL+
Sbjct: 513  PKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 558


>ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Cucumis sativus] gi|449482444|ref|XP_004156283.1|
            PREDICTED: RNA polymerase sigma factor sigF,
            chloroplastic-like [Cucumis sativus]
          Length = 562

 Score =  421 bits (1083), Expect = e-115
 Identities = 211/330 (63%), Positives = 257/330 (77%)
 Frame = -1

Query: 1184 KTESRRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDFNKLVAVKGKLQSQFD 1005
            K   R+ SE +DPNDPLRLFLWGPETK+LLT QEE+ELI  IQD   L  VK +LQSQFD
Sbjct: 234  KDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFD 293

Query: 1004 REPTFAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIAKQYQGRGLNLKDLLQ 825
            REPT  EWA A+G++   L+S++  ++ SREKLINAN RMVV+IAKQYQGRGL+L DLLQ
Sbjct: 294  REPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQ 353

Query: 824  EGSMGLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIRLPENMYNLHAKVLEA 645
             GS+GLMKSVEKFKPQAGCRF SYAYWWIR  I KAIFQHSRTIRLPEN+Y L  KV EA
Sbjct: 354  VGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEA 413

Query: 644  RKSFIQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSVWTDQGITYQEVTADT 465
            +  F++ G++ P+ EELA RVGIT E+   L+ + R P S+QQ VW DQ  T+QE+TAD+
Sbjct: 414  KNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADS 473

Query: 464  NIENPDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGKRQSLSEIGALFGLSK 285
             ++ PDV  ER+LMR+HIRNLL  L+P+E +I++LR+GI    G+ ++L EIG +FGLSK
Sbjct: 474  EVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIED--GREKTLLEIGNMFGLSK 531

Query: 284  ERVRQIESRALLKLKESLNSHGLMAYTDLL 195
            ERVRQ+E+RAL KLK   NS GL AY DLL
Sbjct: 532  ERVRQLENRALYKLKRCCNSQGLGAYADLL 561


>ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Glycine max]
          Length = 554

 Score =  415 bits (1066), Expect = e-113
 Identities = 207/327 (63%), Positives = 262/327 (80%)
 Frame = -1

Query: 1172 RRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDFNKLVAVKGKLQSQFDREPT 993
            ++L EGYDPNDPLRLFL GPE++QLLT +EE++LI  +QD ++L  VK +LQ+Q  REPT
Sbjct: 230  KKLKEGYDPNDPLRLFLSGPESRQLLTREEESQLITQLQDLSRLEEVKIRLQTQLRREPT 289

Query: 992  FAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIAKQYQGRGLNLKDLLQEGSM 813
             AEWA AVG S  AL++++    RS+EKL +AN RMVV+IAK YQGRGL+L+DL QEGS 
Sbjct: 290  LAEWADAVGHSCYALQTQLHCANRSKEKLFHANLRMVVHIAKHYQGRGLSLQDLFQEGST 349

Query: 812  GLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIRLPENMYNLHAKVLEARKSF 633
            GLMKS+EKFKP+AGCRF +YAYWWIR  +RKAIF HSRTIRLPEN+Y L  KV+EA+KS+
Sbjct: 350  GLMKSIEKFKPEAGCRFGTYAYWWIRHAVRKAIFLHSRTIRLPENLYTLLGKVIEAKKSY 409

Query: 632  IQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSVWTDQGITYQEVTADTNIEN 453
            IQEG+ +PT EELA +VGIT EK+ NLL   R P+SMQQ+VW DQ  T+QE+TAD+ IE 
Sbjct: 410  IQEGNLHPTKEELARKVGITIEKMDNLLFASRNPISMQQTVWADQDTTFQEITADSAIEI 469

Query: 452  PDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGKRQSLSEIGALFGLSKERVR 273
            PDV   +QLMR H+ NLL  L+P+E  I++LR+GI    G+ ++LS+IG +FGL+KERVR
Sbjct: 470  PDVTVSKQLMRMHVHNLLNILSPKERGIIRLRFGIED--GEEKTLSDIGKVFGLTKERVR 527

Query: 272  QIESRALLKLKESLNSHGLMAYTDLLL 192
            Q+ESRALLKL++ L S GL AYTDLL+
Sbjct: 528  QLESRALLKLRQCLESQGLDAYTDLLV 554


>ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
            gi|557112044|gb|ESQ52328.1| hypothetical protein
            EUTSA_v10016472mg [Eutrema salsugineum]
          Length = 546

 Score =  411 bits (1056), Expect = e-112
 Identities = 207/327 (63%), Positives = 259/327 (79%)
 Frame = -1

Query: 1172 RRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDFNKLVAVKGKLQSQFDREPT 993
            +++ +G+D +D L+LFLWGPETKQLLT +EE ELI  IQ   KL  VK KL+SQ   EPT
Sbjct: 222  KKMKQGFDTDDALQLFLWGPETKQLLTAKEEAELIAHIQHLIKLEKVKTKLESQNGCEPT 281

Query: 992  FAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIAKQYQGRGLNLKDLLQEGSM 813
              EWA A+GLSS  L+SEI   + SREKLI AN R+VV+IAKQYQ RGLN +DLLQEGSM
Sbjct: 282  IGEWAEAMGLSSPVLKSEIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSM 341

Query: 812  GLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIRLPENMYNLHAKVLEARKSF 633
            GLMKSVEKFKPQ+GCRF +YAYWWIRQ IRK+IFQ+SRTIRLPEN+Y L  KV EARK+ 
Sbjct: 342  GLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTC 401

Query: 632  IQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSVWTDQGITYQEVTADTNIEN 453
            IQ+G++ P+ E+LA  VG++ EKL  LL   R PLSMQQ +W+DQ  T+QEVT D+ IE 
Sbjct: 402  IQDGNYRPSKEQLASHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEVTPDSGIET 461

Query: 452  PDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGKRQSLSEIGALFGLSKERVR 273
            P +   +QLMR H+RNLL  L+P+E++I+KLR+GI    GK++SLSEIG ++GLSKERVR
Sbjct: 462  PSMSVGKQLMRNHVRNLLNVLSPKEKRIIKLRFGIDG--GKQRSLSEIGEIYGLSKERVR 519

Query: 272  QIESRALLKLKESLNSHGLMAYTDLLL 192
            Q+ESRAL +LK++++SHGL AY DLL+
Sbjct: 520  QLESRALYRLKQNMSSHGLNAYADLLV 546


>ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
            gi|312282671|dbj|BAJ34201.1| unnamed protein product
            [Thellungiella halophila] gi|557112045|gb|ESQ52329.1|
            hypothetical protein EUTSA_v10016472mg [Eutrema
            salsugineum]
          Length = 547

 Score =  411 bits (1056), Expect = e-112
 Identities = 207/327 (63%), Positives = 259/327 (79%)
 Frame = -1

Query: 1172 RRLSEGYDPNDPLRLFLWGPETKQLLTIQEENELIGAIQDFNKLVAVKGKLQSQFDREPT 993
            +++ +G+D +D L+LFLWGPETKQLLT +EE ELI  IQ   KL  VK KL+SQ   EPT
Sbjct: 223  KKMKQGFDTDDALQLFLWGPETKQLLTAKEEAELIAHIQHLIKLEKVKTKLESQNGCEPT 282

Query: 992  FAEWAHAVGLSSMALRSEILSWKRSREKLINANFRMVVYIAKQYQGRGLNLKDLLQEGSM 813
              EWA A+GLSS  L+SEI   + SREKLI AN R+VV+IAKQYQ RGLN +DLLQEGSM
Sbjct: 283  IGEWAEAMGLSSPVLKSEIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSM 342

Query: 812  GLMKSVEKFKPQAGCRFPSYAYWWIRQGIRKAIFQHSRTIRLPENMYNLHAKVLEARKSF 633
            GLMKSVEKFKPQ+GCRF +YAYWWIRQ IRK+IFQ+SRTIRLPEN+Y L  KV EARK+ 
Sbjct: 343  GLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTC 402

Query: 632  IQEGHHNPTSEELALRVGITAEKLQNLLSLMRYPLSMQQSVWTDQGITYQEVTADTNIEN 453
            IQ+G++ P+ E+LA  VG++ EKL  LL   R PLSMQQ +W+DQ  T+QEVT D+ IE 
Sbjct: 403  IQDGNYRPSKEQLASHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEVTPDSGIET 462

Query: 452  PDVCAERQLMRKHIRNLLCSLTPREEKIVKLRYGIGSGTGKRQSLSEIGALFGLSKERVR 273
            P +   +QLMR H+RNLL  L+P+E++I+KLR+GI    GK++SLSEIG ++GLSKERVR
Sbjct: 463  PSMSVGKQLMRNHVRNLLNVLSPKEKRIIKLRFGIDG--GKQRSLSEIGEIYGLSKERVR 520

Query: 272  QIESRALLKLKESLNSHGLMAYTDLLL 192
            Q+ESRAL +LK++++SHGL AY DLL+
Sbjct: 521  QLESRALYRLKQNMSSHGLNAYADLLV 547