BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00013316
         (210 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX19931.1| viral replicase [Nandina mosaic virus]                 135   7e-30
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...   123   3e-26
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...   123   3e-26
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...   123   3e-26
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...   123   3e-26
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...   123   3e-26
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...   123   3e-26
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...   122   4e-26
gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago a...   121   1e-25
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1...    94   2e-17
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi...    84   3e-14
ref|YP_001960940.1| RNA-dependent RNA polymerase [Lettuce virus ...    67   3e-09
gb|AHB59866.1| replicase [Narcissus mosaic virus]                      64   2e-08
gb|AAP51012.1| 186K protein [Narcissus mosaic virus strain New Z...    63   5e-08
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A...    61   1e-07
ref|NP_040778.1| replicase [Narcissus mosaic virus] gi|139136|sp...    60   3e-07
gb|AGO03686.1| RNA dependent RNA polymerase, partial [Actinidia ...    60   3e-07
ref|NP_054025.1| RNA dependent RNA polymerase [Cymbidium mosaic ...    59   5e-07
gb|AFM45301.1| RNA-dependent RNA polymerase [Cymbidium mosaic vi...    59   5e-07
gb|ABO41867.1| RNA dependent RNA polymerase [Cymbidium mosaic vi...    59   5e-07

>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score =  135 bits (339), Expect = 7e-30
 Identities = 63/69 (91%), Positives = 67/69 (97%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           LDSHTCFEDVLSGNL+QRLLRPLR+D+QR+L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDVLSGNLLQRLLRPLRADMQRILHFFRGRPSFVKLIKALDWQPITLEFPVRR 407

Query: 28  VNTRLRGPP 2
           VNTRLRGPP
Sbjct: 408 VNTRLRGPP 416


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  123 bits (308), Expect = 3e-26
 Identities = 57/69 (82%), Positives = 63/69 (91%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           LDSHTCFED+LSGNL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRK 407

Query: 28  VNTRLRGPP 2
           VNT LRG P
Sbjct: 408 VNTHLRGAP 416


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  123 bits (308), Expect = 3e-26
 Identities = 57/69 (82%), Positives = 63/69 (91%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           LDSHTCFED+LSGNL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRK 407

Query: 28  VNTRLRGPP 2
           VNT LRG P
Sbjct: 408 VNTHLRGAP 416


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  123 bits (308), Expect = 3e-26
 Identities = 57/69 (82%), Positives = 63/69 (91%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           LDSHTCFED+LSGNL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRK 407

Query: 28  VNTRLRGPP 2
           VNT LRG P
Sbjct: 408 VNTHLRGAP 416


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  123 bits (308), Expect = 3e-26
 Identities = 57/69 (82%), Positives = 63/69 (91%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           LDSHTCFED+LSGNL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRK 407

Query: 28  VNTRLRGPP 2
           VNT LRG P
Sbjct: 408 VNTHLRGAP 416


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  123 bits (308), Expect = 3e-26
 Identities = 57/69 (82%), Positives = 63/69 (91%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           LDSHTCFED+LSGNL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRK 407

Query: 28  VNTRLRGPP 2
           VNT LRG P
Sbjct: 408 VNTHLRGAP 416


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  123 bits (308), Expect = 3e-26
 Identities = 57/69 (82%), Positives = 63/69 (91%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           LDSHTCFED+LSGNL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRK 407

Query: 28  VNTRLRGPP 2
           VNT LRG P
Sbjct: 408 VNTHLRGAP 416


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  122 bits (307), Expect = 4e-26
 Identities = 57/69 (82%), Positives = 63/69 (91%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           LDSHTCFED+LSGNL+QR+LRPL+S I ++L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRMLRPLKSGITQLLNFFRGRPSFVKLIKALDWQPITLEFPVRK 407

Query: 28  VNTRLRGPP 2
           VNT LRG P
Sbjct: 408 VNTHLRGAP 416


>gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
           virus]
          Length = 669

 Score =  121 bits (303), Expect = 1e-25
 Identities = 56/69 (81%), Positives = 62/69 (89%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           LDSHTCFED+LSGNL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRK 407

Query: 28  VNTRLRGPP 2
           VNT LRGPP
Sbjct: 408 VNTLLRGPP 416


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
           gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
           replication protein; AltName: Full=156 kDa protein;
           AltName: Full=ORF1 protein; Includes: RecName:
           Full=RNA-directed RNA polymerase; Includes: RecName:
           Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
           [Plantago asiatica mosaic virus]
          Length = 1385

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/69 (69%), Positives = 51/69 (73%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           LDSHTCFEDV    L  +        I R+LQFFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 347 LDSHTCFEDV-PPKLAPKTTPAPPLGISRILQFFRGRPSFVKLIKALDWQPITLEFPVRD 405

Query: 28  VNTRLRGPP 2
           V T +RGPP
Sbjct: 406 VRTTVRGPP 414


>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
           gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
           [Tulip virus X]
          Length = 1361

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 40/69 (57%), Positives = 49/69 (71%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           LDS TC ED+LSG+L+ RLLRP R + Q +++FF+G P   KLIKAL WQP+ LEF V T
Sbjct: 347 LDSATCHEDILSGSLLTRLLRPARVNWQALVRFFKGSPDHTKLIKALQWQPVLLEFKVST 406

Query: 28  VNTRLRGPP 2
           V    R PP
Sbjct: 407 VLVHKRTPP 415


>ref|YP_001960940.1| RNA-dependent RNA polymerase [Lettuce virus X]
           gi|189458580|emb|CAN88808.1| RNA-dependent RNA
           polymerase [Lettuce virus X]
          Length = 1708

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/65 (46%), Positives = 43/65 (66%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           L S+TC+ED+LSG LI+RL RP+R+ + R ++FF GR  F KL+ AL W+P T       
Sbjct: 352 LKSYTCYEDLLSGGLIKRLTRPVRTAVTRFIEFFAGRNDFNKLMDALKWEPFTYTLEPAV 411

Query: 28  VNTRL 14
             T++
Sbjct: 412 YKTKV 416


>gb|AHB59866.1| replicase [Narcissus mosaic virus]
          Length = 1630

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPIT-----LE 44
           LDS TC+ED+LS N+  RL RPLR+ +++ ++FF+G+  F KL+ AL WQP +     ++
Sbjct: 352 LDSITCYEDLLSSNIWTRLTRPLRTAVRKFVEFFKGKQDFDKLLIALKWQPFSYSLEPVD 411

Query: 43  FPVRTVNTRLR 11
           F    V+ R+R
Sbjct: 412 FTAYFVSRRVR 422


>gb|AAP51012.1| 186K protein [Narcissus mosaic virus strain New Zealand]
          Length = 1643

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPIT-----LE 44
           LDS TC+ED+LS ++  RL RPLR+ +++ ++FF+G+  F KL+ AL WQP +     ++
Sbjct: 352 LDSTTCYEDLLSSDIWMRLTRPLRTAVRKFVEFFKGKQDFDKLLIALKWQPFSYSLEPVD 411

Query: 43  FPVRTVNTRLR 11
           F    V+ R+R
Sbjct: 412 FTAYFVSRRVR 422


>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
           [Allium virus X]
          Length = 1701

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/61 (45%), Positives = 38/61 (62%)
 Frame = -3

Query: 205 DSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTV 26
           DS TCF D+LSG+L ++L +PL + +     F  G P F KL+KAL WQ IT+   V  +
Sbjct: 347 DSMTCFSDILSGSLFKKLFQPLAAFLAECKHFIFGEPDFKKLLKALQWQDITMVVTVADI 406

Query: 25  N 23
           N
Sbjct: 407 N 407


>ref|NP_040778.1| replicase [Narcissus mosaic virus] gi|139136|sp|P15095.1|RDRP_NMV
           RecName: Full=RNA replication protein; AltName: Full=186
           kDa protein; AltName: Full=ORF1 protein; Includes:
           RecName: Full=RNA-directed RNA polymerase; Includes:
           RecName: Full=Helicase gi|222108|dbj|BAA02891.1| 186K
           protein [Narcissus mosaic virus]
          Length = 1643

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPIT-----LE 44
           LDS TC+ED+LS ++  RL RPLR+ +++ ++ F+G+  F KL+ AL WQP +     ++
Sbjct: 352 LDSITCYEDLLSSDIWMRLTRPLRTAVRKFVELFKGKQDFDKLLIALKWQPFSYSLEPVD 411

Query: 43  FPVRTVNTRLR 11
           F    V+ R+R
Sbjct: 412 FTAYFVSRRVR 422


>gb|AGO03686.1| RNA dependent RNA polymerase, partial [Actinidia virus X]
          Length = 1607

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 25/53 (47%), Positives = 41/53 (77%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPIT 50
           LDS TCFED+LS N+ +RL  P+R++ +++++FF+G+  F KL++AL W+  T
Sbjct: 357 LDSITCFEDMLSNNVWRRLTLPIRTNFRQLVEFFKGKSDFDKLLQALKWETFT 409


>ref|NP_054025.1| RNA dependent RNA polymerase [Cymbidium mosaic virus]
           gi|2105116|gb|AAB57879.1| RNA dependent RNA polymerase
           [Cymbidium mosaic virus]
          Length = 1417

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/64 (39%), Positives = 41/64 (64%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           L S + ++D+LS N+ Q    P+++ I+ ++Q F G   F +L+KALDWQ  +   PV T
Sbjct: 351 LSSVSSYDDILSSNIFQHFTIPIKNKIRELVQLFTGADQFNQLLKALDWQTFSYSMPVET 410

Query: 28  VNTR 17
           ++TR
Sbjct: 411 IHTR 414


>gb|AFM45301.1| RNA-dependent RNA polymerase [Cymbidium mosaic virus]
          Length = 1417

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/64 (39%), Positives = 41/64 (64%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           L S + ++D+LS N+ Q    P+++ I+ ++Q F G   F +L+KALDWQ  +   PV T
Sbjct: 351 LSSVSSYDDILSSNIFQHFTIPIKNKIRELVQLFTGADQFNQLLKALDWQTFSYSMPVET 410

Query: 28  VNTR 17
           ++TR
Sbjct: 411 IHTR 414


>gb|ABO41867.1| RNA dependent RNA polymerase [Cymbidium mosaic virus]
          Length = 1417

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/64 (39%), Positives = 41/64 (64%)
 Frame = -3

Query: 208 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 29
           L S + ++D+LS N+ Q    P+++ I+ ++Q F G   F +L+KALDWQ  +   PV T
Sbjct: 351 LSSVSSYDDILSSNIFQHFTIPIKNKIRELVQLFTGADQFNQLLKALDWQTFSYSMPVET 410

Query: 28  VNTR 17
           ++TR
Sbjct: 411 IHTR 414