BLASTX nr result
ID: Achyranthes22_contig00010735
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00010735
(3012 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp... 672 0.0
ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron sp... 660 0.0
gb|EOY30431.1| CRS1 / YhbY domain-containing protein, putative i... 658 0.0
gb|EOY30435.1| CRS1 / YhbY domain-containing protein, putative i... 650 0.0
gb|EOY30434.1| CRS1 / YhbY domain-containing protein, putative i... 650 0.0
ref|XP_006475470.1| PREDICTED: chloroplastic group IIA intron sp... 644 0.0
ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron sp... 644 0.0
ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citr... 644 0.0
ref|XP_002514120.1| conserved hypothetical protein [Ricinus comm... 643 0.0
ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Popu... 640 e-180
ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron sp... 640 e-180
emb|CBI27903.3| unnamed protein product [Vitis vinifera] 639 e-180
ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron sp... 628 e-177
ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron sp... 623 e-175
gb|EMJ04994.1| hypothetical protein PRUPE_ppa001111mg [Prunus pe... 618 e-174
ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron sp... 612 e-172
gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitat... 609 e-171
ref|XP_004507937.1| PREDICTED: chloroplastic group IIA intron sp... 590 e-165
ref|XP_004956664.1| PREDICTED: chloroplastic group IIA intron sp... 580 e-162
ref|XP_006412812.1| hypothetical protein EUTSA_v10024391mg [Eutr... 579 e-162
>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Vitis vinifera]
Length = 884
Score = 672 bits (1735), Expect = 0.0
Identities = 411/944 (43%), Positives = 536/944 (56%), Gaps = 29/944 (3%)
Frame = +3
Query: 54 LSTKPLTHFPVFFKPLKLK-PCCHNTTQTETQKTQHLNIDFVVHKKKRKPKPSFYDQIRG 230
L +P H+ F+ LK C +++ Q +TQ+ + + K KRKP+PSF++QIR
Sbjct: 14 LLLQPQAHYSNTFRTLKFNCSCSYHSIQVDTQQVK---VPLKTTKAKRKPRPSFFEQIRD 70
Query: 231 KWSAKPISITKKFPWXXXXXXXXXXXXXXXXXXXAVEIQEEKDSNSGISNFGVKSPNLSD 410
KWS K S +KFPW E EE ++SG+ + D
Sbjct: 71 KWSLKINSPREKFPWQ--------------------EQAEETQNSSGVV--------VPD 102
Query: 411 KLIDGTKIEEPIFGFDRNLSNTVSLPDNSALDNGLCSSFVEEEKLTETKLVSTSR-NHNG 587
+ + + P+ S VS+P + E K +LVS + N
Sbjct: 103 SEVIDSSVGSPVSSASE--SRFVSVP------------CIHESKPRNPRLVSEPEISQNS 148
Query: 588 SKKVYNVVDKLVAYKSNVEKNSVFDIEQEDSKVTSYGTKYDVDNANWKNNVAKVSVL--E 761
++ NVV +++++V++ S ++ DS G +VD + VL E
Sbjct: 149 CEQGVNVVG-FGSHRASVDEWSKSFQKEVDSDGKFEGEGVEVDEI-------PIGVLGTE 200
Query: 762 HSEVTLSSNKYDVDNAHLKDNIAVIKVQEDSEVTLSSSEYDTASGNSDVDKARDEKLADG 941
+E+ + D+ V+L+ D D E +
Sbjct: 201 KTEIEMG----------------------DANVSLNEKP-----PGGDEDFGNFEGFSGN 233
Query: 942 KNTDRLPWISENDSEKKEV----RSKMKLAEERIPEHELKRLRNVALRMKERLKVGAAGV 1109
+ LPW + E R ++AE +PEHEL+RL+N+ALRM ER+KVGAAGV
Sbjct: 234 SSLIELPWKRREGLQPVERDGWGRRNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGV 293
Query: 1110 TQALVDTIHEKWKIDEVVKLKFEGPSMLNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLT 1289
TQ+LVD IHEKW+ DEVVKLKFEGPS NMKR H++LE++TGGLVIWR+GSSVVL+RG+
Sbjct: 294 TQSLVDAIHEKWRKDEVVKLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMA 353
Query: 1290 YNLDCVRTFMEEKKVNLDFSPHPKNH--------------------VYDSLKLRKTLXXX 1409
Y L CV++++++++ N++ S + ++ + DS + K L
Sbjct: 354 YKLHCVQSYIKQERDNVNISEYSQDAANVIIQDIGVKDIVKTTESVISDSARYLKDLSEE 413
Query: 1410 XXXXXXXXDKMLDELGPRYVDWSGXXXXXXXXXXXXXXXXGYKTPFRRCPYGVRLRLRDE 1589
+ +LDELGPR+ DWSG YK PFR PYG+R LR+
Sbjct: 414 ELMDLSELNHLLDELGPRFKDWSGREPLPVDADLLPSVVHEYKPPFRLLPYGMRHCLRNR 473
Query: 1590 ETTQFRRTARITHPHFALGRSRELQGLAAAMVKLWETSAIAKIVIKRGVLNTNNERMAEE 1769
E T RR AR PHFALGRSRELQGLA AMVKLWE SAIAKI IKRGV NT N+RMAEE
Sbjct: 474 EMTFIRRLARTMPPHFALGRSRELQGLAMAMVKLWERSAIAKIAIKRGVQNTCNDRMAEE 533
Query: 1770 LKRLTGGTLLSRNKEYIVFYRGNDFLPPKVAESLKEREKMTMLQYQEEE-ARRNASAMIN 1946
LK LTGGTL+SRNK+YIVFYRGNDFLPP V E+LKER K+ LQ EEE AR ASA+I+
Sbjct: 534 LKNLTGGTLVSRNKDYIVFYRGNDFLPPHVMEALKERRKLRDLQQDEEEQARHRASALID 593
Query: 1947 SSYKLHKVPMVAGTLAETIAATSQWGKQPSNEDVKKMMQDSALVRRASLVKYXXXXXXXX 2126
S + K P+VAGTLAET+AATS+WG +PS EDV KM++DSAL R ASLV+Y
Sbjct: 594 SKARSAKGPLVAGTLAETLAATSRWGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAHA 653
Query: 2127 XXXXXXXXXXXXXVQGYXXXXXXXXXXXXXXXXXRLIFRKMGLSMKPFLLVGRRDVFDGT 2306
VQ R +FRK+GLSMKPFLL+G R +FDGT
Sbjct: 654 KAKLKKTEKALRKVQEDLEPAELPMDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGT 713
Query: 2307 IENVHLHWKFRELVKVIVKGKNFKQVKQVAINLEAESGGVLVSIDRTTKGYAIIIYRGKN 2486
+EN+HLHWK+RELVK+IVKGKNF QVK +AI+LEAESGGVLVS+DRT KGYAII+YRGKN
Sbjct: 714 VENMHLHWKYRELVKIIVKGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKN 773
Query: 2487 YRQPIQLRARNLLTKRQALARSIELQRREGLKHHISSLQEQMELLKSXXXXXXXXXXXXX 2666
Y++P LR +NLLTKRQALARSIELQR E LKHHIS L+E+++LLKS
Sbjct: 774 YQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDLEERIKLLKSLPEEMKTGNGIDD 833
Query: 2667 XTFYEKLDNSILSXXXXXXXXXXXAYLQTYESGDENGAFIDDEV 2798
FY +LD + + AYL+ Y S D+ + E+
Sbjct: 834 KAFYSRLDGTYSTDEDMEEDEGEEAYLEIYGSEDKGSNIQNKEL 877
>ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 933
Score = 660 bits (1703), Expect = 0.0
Identities = 412/911 (45%), Positives = 535/911 (58%), Gaps = 33/911 (3%)
Frame = +3
Query: 147 KTQHLNIDFVVHKKKRKPKPSFYDQIRGKWSAKPISITKKFPWXXXXXXXXXXXXXXXXX 326
KT + +D KKKRKPKPSFY QI+ KWS K S KFPW
Sbjct: 36 KTVEIKVDIEPTKKKRKPKPSFYQQIQDKWSMKVDSPRHKFPWQNQEESEDEEEDEE--- 92
Query: 327 XXAVEIQEEKDSNSGISNFGVKSPNLSDKLIDGTKIEEPIFGFDRNLSNTV-SLPDNSAL 503
E +E + S + F +S + + K P + + V S+
Sbjct: 93 ----EKEEGESQQSEVRVFKPVDQEMSFSMPNPVKYA-PWANRTKPIKTQVGSIKPEVDY 147
Query: 504 DNGLCSSFVEEEKLTETKLVSTSRNH----NGSKKVYNVVDKLVAYKSNVEKNSVFD-IE 668
++ + V + TK S N +G+ K+ VD++ S K V E
Sbjct: 148 EHEIYKPSVANSDIDATKEFSKVENFREEFDGNGKLDRDVDEVSVGFSKERKTMVSKKFE 207
Query: 669 QEDSKVTSYGTKYD---VDNANWKNNVAKVSVLEHSEVTLSSNKYDVDNAHLK---DNIA 830
QE + + D V + +N V K+ ++S ++ L+ D I+
Sbjct: 208 QEFDRNGKLEREIDEVFVGVSKEENEVEKM---------ITSKSFEHRKGILEGRIDRIS 258
Query: 831 V-IKVQED---SEVTLSSSEYDTASGNSDVDKARDEKLADGKNTD---RLPW------IS 971
V + V+E+ SE + ++ +T SG+S+ D+ ++ G ++ RLPW ++
Sbjct: 259 VGVSVKEETVVSERLIGAAVDETVSGDSENDENVVTFVSSGSDSRASARLPWEREGELVN 318
Query: 972 ENDSEKKEVRSKMKLAEERIPEHELKRLRNVALRMKERLKVGAAGVTQALVDTIHEKWKI 1151
E + ++ S AE +P+HELKRLRNV+LRM ER KVGAAG+TQ+LVD IHEKWK+
Sbjct: 319 EEGGKTRKKWSNTLSAETSLPDHELKRLRNVSLRMLERTKVGAAGITQSLVDAIHEKWKV 378
Query: 1152 DEVVKLKFEGPSMLNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLTYNLDCVRTFMEEKK 1331
DEVVKLKFE P LNM+R H +LESKTGGLVIWRSGSSVVL+RG++YNL CV+++ ++++
Sbjct: 379 DEVVKLKFEEPLSLNMRRTHGILESKTGGLVIWRSGSSVVLYRGISYNLQCVKSYTKQRQ 438
Query: 1332 VNLDFSPHPKNHVYDSLK------LRKTLXXXXXXXXXXXDKMLDELGPRYVDWSGXXXX 1493
H + D+++ K L + +LDELGPR+ DW G
Sbjct: 439 TG----SHMLQDLEDTVRRDGTHNYMKDLSKKELMELSDLNHLLDELGPRFKDWIGREPL 494
Query: 1494 XXXXXXXXXXXXGYKTPFRRCPYGVRLRLRDEETTQFRRTARITHPHFALGRSRELQGLA 1673
GY+TPFR PYGVR L+D++ T+FRR AR PHFALGRS+ELQGLA
Sbjct: 495 PVDADLLPAVVPGYQTPFRLLPYGVRPGLKDKDMTKFRRLARAAPPHFALGRSKELQGLA 554
Query: 1674 AAMVKLWETSAIAKIVIKRGVLNTNNERMAEELKRLTGGTLLSRNKEYIVFYRGNDFLPP 1853
AMVKLWE AIAKI IKRGV NT NERMAEELKRLTGGTLLSRNK++IVFYRGNDFLPP
Sbjct: 555 KAMVKLWEKCAIAKIAIKRGVQNTRNERMAEELKRLTGGTLLSRNKDFIVFYRGNDFLPP 614
Query: 1854 KVAESLKEREKMTMLQYQEEE-ARRNASAMINSSYKLHKVPMVAGTLAETIAATSQWGKQ 2030
V LKER +M LQ EEE AR+ S I S + +VAGTLAETIAAT++W KQ
Sbjct: 615 VVTGVLKERREMRELQQDEEEKARQMTSDYIESRSEASNGQLVAGTLAETIAATARWIKQ 674
Query: 2031 PSNEDVKKMMQDSALVRRASLVKYXXXXXXXXXXXXXXXXXXXXXVQGYXXXXXXXXXXX 2210
+ EDV KM +DS L +RASLV+Y VQ
Sbjct: 675 LTIEDVDKMTRDSNLEKRASLVRYLEKKLALAKGKLKKAEKALAKVQENLDPADLPDDLE 734
Query: 2211 XXXXXXRLIFRKMGLSMKPFLLVGRRDVFDGTIENVHLHWKFRELVKVIVKGKNFKQVKQ 2390
R +FRK+GLSMKPFLL+GRR+V+ GTIEN+HLHWK RELVK+IV+GKNFKQVK
Sbjct: 735 ILTDEDRFLFRKIGLSMKPFLLLGRREVYSGTIENMHLHWKHRELVKIIVRGKNFKQVKH 794
Query: 2391 VAINLEAESGGVLVSIDRTTKGYAIIIYRGKNYRQPIQLRARNLLTKRQALARSIELQRR 2570
+AI+LEAESGG+LVS+D+TTKGYAII+YRGKNY+ P+ LR RNLLT+RQALARSIELQRR
Sbjct: 795 IAISLEAESGGLLVSLDKTTKGYAIILYRGKNYQCPLPLRPRNLLTRRQALARSIELQRR 854
Query: 2571 EGLKHHISSLQEQMELLKS-XXXXXXXXXXXXXXTFYEKLDNSILSXXXXXXXXXXXAYL 2747
EGLKHH+S LQE++ELLK+ T + LD+S+ S AYL
Sbjct: 855 EGLKHHLSDLQERIELLKTELEEMENGRMVDDGRTLHSSLDDSLFS-SDNEEDEGEEAYL 913
Query: 2748 QTYESGDENGA 2780
+ Y+SG+E+ +
Sbjct: 914 EVYDSGNEDNS 924
>gb|EOY30431.1| CRS1 / YhbY domain-containing protein, putative isoform 1 [Theobroma
cacao] gi|508783176|gb|EOY30432.1| CRS1 / YhbY
domain-containing protein, putative isoform 1 [Theobroma
cacao] gi|508783177|gb|EOY30433.1| CRS1 / YhbY
domain-containing protein, putative isoform 1 [Theobroma
cacao]
Length = 873
Score = 658 bits (1698), Expect = 0.0
Identities = 402/933 (43%), Positives = 525/933 (56%), Gaps = 31/933 (3%)
Frame = +3
Query: 72 THFPV-FFKPLKLKPCC--HNTTQTETQKTQHLNIDFVVHKKKRKPKPSFYDQIRGKWSA 242
TH P F+ LK KP C H T + + T +KRKPKPSF DQI+ KWS
Sbjct: 29 THCPNNSFRALKFKPSCCSHQTIKVGVEIT-----------RKRKPKPSFLDQIKDKWSL 77
Query: 243 KP-ISITKKFPWXXXXXXXXXXXXXXXXXXXAVEIQEEKDSNSGISNFGVKSPNLSDKLI 419
KP IS +KFPW A+ + E+D + + S + ++I
Sbjct: 78 KPIISTREKFPWQEKEEFEEEEVERKQSFGGAIS-ESERDEDPQVEGSDPVSSSFPSRVI 136
Query: 420 D-----GTKIEEPIFGFDRNLSNTVSLPDNSALDNGLCSSFVEEEKLTETKLVSTSRNHN 584
G++ EP F F +P+ S ++ + SF E+ + N
Sbjct: 137 SAPWSHGSEFNEPHFDF---------VPEISNFESKIEDSFASEKTI-------EFPGGN 180
Query: 585 GSKKVYNVVDKLVAYKSNVEKNSVFDIEQEDSKVTSYGTKYDVDNANWKNNVAKVSVLEH 764
++ V ++DK + V N K+ +
Sbjct: 181 KAEVVGGLIDKSESLNEEVNINK-----------------------------QKIGLPVG 211
Query: 765 SEVTLSSNKYDVDNAHLKDNIAVIKVQEDSEVTLSSSEYDTASGNSDVDKARDEKLADGK 944
EV D V+ +E+ EV+ S E G+ + D R +K
Sbjct: 212 KEVAAVEGLND-----------VVSSRENFEVSNSDDE----GGSVEGDSGRSKK----- 251
Query: 945 NTDRLPWISENDSEKKEVRSKMKLAEERIPEHELKRLRNVALRMKERLKVGAAGVTQALV 1124
RS ++ + IPEHE +RLRNVALRM ER KVG AG+TQALV
Sbjct: 252 ------------------RSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVAGITQALV 293
Query: 1125 DTIHEKWKIDEVVKLKFEGPSMLNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLTYNLDC 1304
+ IHE+WK+DEVVKLKFE P LNMKR H++LE +TGGLVIWRSGSS+VL+RG+ Y L C
Sbjct: 294 EYIHERWKMDEVVKLKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRGMAYKLHC 353
Query: 1305 VRTFMEEKKVN---LDFSPHPKNHVYDSLKLR-----------------KTLXXXXXXXX 1424
V+++ + KV+ LD S + ++ ++ ++ K L
Sbjct: 354 VQSYTSQNKVDMNALDCSTNVESDTTQNIVVKESVRTMECFMPSSSEYLKDLSKEELMDL 413
Query: 1425 XXXDKMLDELGPRYVDWSGXXXXXXXXXXXXXXXXGYKTPFRRCPYGVRLRLRDEETTQF 1604
+ +LDELGPRY DWSG GY+ PFRR PYG+R L+D E T F
Sbjct: 414 CELNHLLDELGPRYKDWSGREPLPVDADLLPPVVPGYQPPFRRLPYGIRHCLKDHEMTTF 473
Query: 1605 RRTARITHPHFALGRSRELQGLAAAMVKLWETSAIAKIVIKRGVLNTNNERMAEELKRLT 1784
RR AR PHFALGR+RELQGLA A+VKLWE+SAIAKI IKRGV NT NERMAEELK+LT
Sbjct: 474 RRLARTVPPHFALGRNRELQGLAEAIVKLWESSAIAKIAIKRGVQNTRNERMAEELKQLT 533
Query: 1785 GGTLLSRNKEYIVFYRGNDFLPPKVAESLKEREKMTMLQYQEEE-ARRNASAMINSSYKL 1961
GGTLLSRNKE+IVFYRGNDFLPP V ++LKER+K LQ +EEE AR A++ S+ K
Sbjct: 534 GGTLLSRNKEFIVFYRGNDFLPPVVTKTLKERQKSRNLQQEEEEKARERVLALVGSNAKA 593
Query: 1962 HKVPMVAGTLAETIAATSQWGKQPSNEDVKKMMQDSALVRRASLVKYXXXXXXXXXXXXX 2141
K+P+VAGTLAET AATS+WG QPS E+V++M ++SAL ++ASLV+Y
Sbjct: 594 SKLPLVAGTLAETTAATSRWGHQPSIEEVEEMKKNSALTQQASLVRYLEKKLALAIGKLR 653
Query: 2142 XXXXXXXXVQGYXXXXXXXXXXXXXXXXXRLIFRKMGLSMKPFLLVGRRDVFDGTIENVH 2321
VQ + R++FRK+GLSMKP+LL+GRR V+DGTIEN+H
Sbjct: 654 KANKALAKVQKHLEPADLPTDLETLSDEERILFRKIGLSMKPYLLLGRRGVYDGTIENMH 713
Query: 2322 LHWKFRELVKVIVKGKNFKQVKQVAINLEAESGGVLVSIDRTTKGYAIIIYRGKNYRQPI 2501
LHWK+RELVK+IVKG+NF QVK +AI+LEAESGG+LVS+D+TTKGYAIIIYRGKNY +P
Sbjct: 714 LHWKYRELVKIIVKGENFAQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYMRPC 773
Query: 2502 QLRARNLLTKRQALARSIELQRREGLKHHISSLQEQMELLKS-XXXXXXXXXXXXXXTFY 2678
LR +NLLT+RQALARS+ELQRRE LKHH+ LQE++EL+KS T Y
Sbjct: 774 VLRPKNLLTRRQALARSVELQRREALKHHVLDLQEKIELMKSELEEMKTGKEIDVDKTSY 833
Query: 2679 EKLDNSILSXXXXXXXXXXXAYLQTYESGDENG 2777
+L+ + L YL+TY+S +++G
Sbjct: 834 SRLNKAPLFDEDIEEGEWEEEYLETYDSSEDDG 866
>gb|EOY30435.1| CRS1 / YhbY domain-containing protein, putative isoform 5 [Theobroma
cacao] gi|508783180|gb|EOY30436.1| CRS1 / YhbY
domain-containing protein, putative isoform 5 [Theobroma
cacao]
Length = 822
Score = 650 bits (1677), Expect = 0.0
Identities = 392/882 (44%), Positives = 507/882 (57%), Gaps = 30/882 (3%)
Frame = +3
Query: 72 THFPV-FFKPLKLKPCC--HNTTQTETQKTQHLNIDFVVHKKKRKPKPSFYDQIRGKWSA 242
TH P F+ LK KP C H T + + T +KRKPKPSF DQI+ KWS
Sbjct: 29 THCPNNSFRALKFKPSCCSHQTIKVGVEIT-----------RKRKPKPSFLDQIKDKWSL 77
Query: 243 KP-ISITKKFPWXXXXXXXXXXXXXXXXXXXAVEIQEEKDSNSGISNFGVKSPNLSDKLI 419
KP IS +KFPW A+ + E+D + + S + ++I
Sbjct: 78 KPIISTREKFPWQEKEEFEEEEVERKQSFGGAIS-ESERDEDPQVEGSDPVSSSFPSRVI 136
Query: 420 D-----GTKIEEPIFGFDRNLSNTVSLPDNSALDNGLCSSFVEEEKLTETKLVSTSRNHN 584
G++ EP F F +P+ S ++ + SF E+ + N
Sbjct: 137 SAPWSHGSEFNEPHFDF---------VPEISNFESKIEDSFASEKTI-------EFPGGN 180
Query: 585 GSKKVYNVVDKLVAYKSNVEKNSVFDIEQEDSKVTSYGTKYDVDNANWKNNVAKVSVLEH 764
++ V ++DK + V N K+ +
Sbjct: 181 KAEVVGGLIDKSESLNEEVNINK-----------------------------QKIGLPVG 211
Query: 765 SEVTLSSNKYDVDNAHLKDNIAVIKVQEDSEVTLSSSEYDTASGNSDVDKARDEKLADGK 944
EV D V+ +E+ EV+ S E G+ + D R +K
Sbjct: 212 KEVAAVEGLND-----------VVSSRENFEVSNSDDE----GGSVEGDSGRSKK----- 251
Query: 945 NTDRLPWISENDSEKKEVRSKMKLAEERIPEHELKRLRNVALRMKERLKVGAAGVTQALV 1124
RS ++ + IPEHE +RLRNVALRM ER KVG AG+TQALV
Sbjct: 252 ------------------RSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVAGITQALV 293
Query: 1125 DTIHEKWKIDEVVKLKFEGPSMLNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLTYNLDC 1304
+ IHE+WK+DEVVKLKFE P LNMKR H++LE +TGGLVIWRSGSS+VL+RG+ Y L C
Sbjct: 294 EYIHERWKMDEVVKLKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRGMAYKLHC 353
Query: 1305 VRTFMEEKKVN---LDFSPHPKNHVYDSLKLR-----------------KTLXXXXXXXX 1424
V+++ + KV+ LD S + ++ ++ ++ K L
Sbjct: 354 VQSYTSQNKVDMNALDCSTNVESDTTQNIVVKESVRTMECFMPSSSEYLKDLSKEELMDL 413
Query: 1425 XXXDKMLDELGPRYVDWSGXXXXXXXXXXXXXXXXGYKTPFRRCPYGVRLRLRDEETTQF 1604
+ +LDELGPRY DWSG GY+ PFRR PYG+R L+D E T F
Sbjct: 414 CELNHLLDELGPRYKDWSGREPLPVDADLLPPVVPGYQPPFRRLPYGIRHCLKDHEMTTF 473
Query: 1605 RRTARITHPHFALGRSRELQGLAAAMVKLWETSAIAKIVIKRGVLNTNNERMAEELKRLT 1784
RR AR PHFALGR+RELQGLA A+VKLWE+SAIAKI IKRGV NT NERMAEELK+LT
Sbjct: 474 RRLARTVPPHFALGRNRELQGLAEAIVKLWESSAIAKIAIKRGVQNTRNERMAEELKQLT 533
Query: 1785 GGTLLSRNKEYIVFYRGNDFLPPKVAESLKEREKMTMLQYQEEE-ARRNASAMINSSYKL 1961
GGTLLSRNKE+IVFYRGNDFLPP V ++LKER+K LQ +EEE AR A++ S+ K
Sbjct: 534 GGTLLSRNKEFIVFYRGNDFLPPVVTKTLKERQKSRNLQQEEEEKARERVLALVGSNAKA 593
Query: 1962 HKVPMVAGTLAETIAATSQWGKQPSNEDVKKMMQDSALVRRASLVKYXXXXXXXXXXXXX 2141
K+P+VAGTLAET AATS+WG QPS E+V++M ++SAL ++ASLV+Y
Sbjct: 594 SKLPLVAGTLAETTAATSRWGHQPSIEEVEEMKKNSALTQQASLVRYLEKKLALAIGKLR 653
Query: 2142 XXXXXXXXVQGYXXXXXXXXXXXXXXXXXRLIFRKMGLSMKPFLLVGRRDVFDGTIENVH 2321
VQ + R++FRK+GLSMKP+LL+GRR V+DGTIEN+H
Sbjct: 654 KANKALAKVQKHLEPADLPTDLETLSDEERILFRKIGLSMKPYLLLGRRGVYDGTIENMH 713
Query: 2322 LHWKFRELVKVIVKGKNFKQVKQVAINLEAESGGVLVSIDRTTKGYAIIIYRGKNYRQPI 2501
LHWK+RELVK+IVKG+NF QVK +AI+LEAESGG+LVS+D+TTKGYAIIIYRGKNY +P
Sbjct: 714 LHWKYRELVKIIVKGENFAQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYMRPC 773
Query: 2502 QLRARNLLTKRQALARSIELQRREGLKHHISSLQEQMELLKS 2627
LR +NLLT+RQALARS+ELQRRE LKHH+ LQE++EL+KS
Sbjct: 774 VLRPKNLLTRRQALARSVELQRREALKHHVLDLQEKIELMKS 815
>gb|EOY30434.1| CRS1 / YhbY domain-containing protein, putative isoform 4 [Theobroma
cacao]
Length = 818
Score = 650 bits (1677), Expect = 0.0
Identities = 392/882 (44%), Positives = 507/882 (57%), Gaps = 30/882 (3%)
Frame = +3
Query: 72 THFPV-FFKPLKLKPCC--HNTTQTETQKTQHLNIDFVVHKKKRKPKPSFYDQIRGKWSA 242
TH P F+ LK KP C H T + + T +KRKPKPSF DQI+ KWS
Sbjct: 29 THCPNNSFRALKFKPSCCSHQTIKVGVEIT-----------RKRKPKPSFLDQIKDKWSL 77
Query: 243 KP-ISITKKFPWXXXXXXXXXXXXXXXXXXXAVEIQEEKDSNSGISNFGVKSPNLSDKLI 419
KP IS +KFPW A+ + E+D + + S + ++I
Sbjct: 78 KPIISTREKFPWQEKEEFEEEEVERKQSFGGAIS-ESERDEDPQVEGSDPVSSSFPSRVI 136
Query: 420 D-----GTKIEEPIFGFDRNLSNTVSLPDNSALDNGLCSSFVEEEKLTETKLVSTSRNHN 584
G++ EP F F +P+ S ++ + SF E+ + N
Sbjct: 137 SAPWSHGSEFNEPHFDF---------VPEISNFESKIEDSFASEKTI-------EFPGGN 180
Query: 585 GSKKVYNVVDKLVAYKSNVEKNSVFDIEQEDSKVTSYGTKYDVDNANWKNNVAKVSVLEH 764
++ V ++DK + V N K+ +
Sbjct: 181 KAEVVGGLIDKSESLNEEVNINK-----------------------------QKIGLPVG 211
Query: 765 SEVTLSSNKYDVDNAHLKDNIAVIKVQEDSEVTLSSSEYDTASGNSDVDKARDEKLADGK 944
EV D V+ +E+ EV+ S E G+ + D R +K
Sbjct: 212 KEVAAVEGLND-----------VVSSRENFEVSNSDDE----GGSVEGDSGRSKK----- 251
Query: 945 NTDRLPWISENDSEKKEVRSKMKLAEERIPEHELKRLRNVALRMKERLKVGAAGVTQALV 1124
RS ++ + IPEHE +RLRNVALRM ER KVG AG+TQALV
Sbjct: 252 ------------------RSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVAGITQALV 293
Query: 1125 DTIHEKWKIDEVVKLKFEGPSMLNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLTYNLDC 1304
+ IHE+WK+DEVVKLKFE P LNMKR H++LE +TGGLVIWRSGSS+VL+RG+ Y L C
Sbjct: 294 EYIHERWKMDEVVKLKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRGMAYKLHC 353
Query: 1305 VRTFMEEKKVN---LDFSPHPKNHVYDSLKLR-----------------KTLXXXXXXXX 1424
V+++ + KV+ LD S + ++ ++ ++ K L
Sbjct: 354 VQSYTSQNKVDMNALDCSTNVESDTTQNIVVKESVRTMECFMPSSSEYLKDLSKEELMDL 413
Query: 1425 XXXDKMLDELGPRYVDWSGXXXXXXXXXXXXXXXXGYKTPFRRCPYGVRLRLRDEETTQF 1604
+ +LDELGPRY DWSG GY+ PFRR PYG+R L+D E T F
Sbjct: 414 CELNHLLDELGPRYKDWSGREPLPVDADLLPPVVPGYQPPFRRLPYGIRHCLKDHEMTTF 473
Query: 1605 RRTARITHPHFALGRSRELQGLAAAMVKLWETSAIAKIVIKRGVLNTNNERMAEELKRLT 1784
RR AR PHFALGR+RELQGLA A+VKLWE+SAIAKI IKRGV NT NERMAEELK+LT
Sbjct: 474 RRLARTVPPHFALGRNRELQGLAEAIVKLWESSAIAKIAIKRGVQNTRNERMAEELKQLT 533
Query: 1785 GGTLLSRNKEYIVFYRGNDFLPPKVAESLKEREKMTMLQYQEEE-ARRNASAMINSSYKL 1961
GGTLLSRNKE+IVFYRGNDFLPP V ++LKER+K LQ +EEE AR A++ S+ K
Sbjct: 534 GGTLLSRNKEFIVFYRGNDFLPPVVTKTLKERQKSRNLQQEEEEKARERVLALVGSNAKA 593
Query: 1962 HKVPMVAGTLAETIAATSQWGKQPSNEDVKKMMQDSALVRRASLVKYXXXXXXXXXXXXX 2141
K+P+VAGTLAET AATS+WG QPS E+V++M ++SAL ++ASLV+Y
Sbjct: 594 SKLPLVAGTLAETTAATSRWGHQPSIEEVEEMKKNSALTQQASLVRYLEKKLALAIGKLR 653
Query: 2142 XXXXXXXXVQGYXXXXXXXXXXXXXXXXXRLIFRKMGLSMKPFLLVGRRDVFDGTIENVH 2321
VQ + R++FRK+GLSMKP+LL+GRR V+DGTIEN+H
Sbjct: 654 KANKALAKVQKHLEPADLPTDLETLSDEERILFRKIGLSMKPYLLLGRRGVYDGTIENMH 713
Query: 2322 LHWKFRELVKVIVKGKNFKQVKQVAINLEAESGGVLVSIDRTTKGYAIIIYRGKNYRQPI 2501
LHWK+RELVK+IVKG+NF QVK +AI+LEAESGG+LVS+D+TTKGYAIIIYRGKNY +P
Sbjct: 714 LHWKYRELVKIIVKGENFAQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYMRPC 773
Query: 2502 QLRARNLLTKRQALARSIELQRREGLKHHISSLQEQMELLKS 2627
LR +NLLT+RQALARS+ELQRRE LKHH+ LQE++EL+KS
Sbjct: 774 VLRPKNLLTRRQALARSVELQRREALKHHVLDLQEKIELMKS 815
>ref|XP_006475470.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X5 [Citrus sinensis]
Length = 803
Score = 644 bits (1662), Expect = 0.0
Identities = 398/881 (45%), Positives = 509/881 (57%), Gaps = 27/881 (3%)
Frame = +3
Query: 66 PLTHFPVFFKPLKLKPCCHNTTQTETQKT--QHLNIDFVVH--KKKRKPKPSFYDQIRGK 233
PLT V + PLK + C N+ ++ HL I + + KRK KPSF++QIR K
Sbjct: 15 PLTQPAVHYLPLKPQSQCSNSFRSIRIGICFSHLTIQAQLGTTRTKRKVKPSFFEQIRHK 74
Query: 234 WSAKPISITKKFPWXXXXXXXXXXXXXXXXXXXAVEIQEEKDSNSGISNFGVKSPNLSDK 413
WS K IS +KFPW QEE++ + N P
Sbjct: 75 WSHKVISPREKFPW-----------------------QEEEEEEEEVQN----EPE---- 103
Query: 414 LIDGTKIEEPIFGFDRNLSNTVSLPDNSALDNGLCSS-FVEEEKLTETKL------VSTS 572
T +E S S P +SAL N S+ ++ E K ++T
Sbjct: 104 ----TDVE----------SRVRSEPFSSALPNRFVSAPWIHGTDSKEIKFDSPQTKITTK 149
Query: 573 RNHNGSKKVYNVVDKLVAYKSNVEKNSVFDIEQEDSKVTSYGTKYDVDNANWKNNVAKVS 752
+ G + +K V + S V++ +V ++++E Y + D N ++S
Sbjct: 150 KEDIGDDGLLGSFEKTVVH-SAVKEKTVIELDKEGD----YNKELKTDEVKIDANPIELS 204
Query: 753 VLEHSEVTLSSNKYDVDNAHLKDNIAVIKVQEDSEVTLSSSEYDTASGNSDVDKARDEKL 932
H EV S N+ + H D+ +V
Sbjct: 205 KDRHREVG-SLNQKQIKGYHEVDDPSV--------------------------------- 230
Query: 933 ADGKNTDRLPWISENDSEKKEVRSKMKLAEERIPEHELKRLRNVALRMKERLKVGAAGVT 1112
LPW D + RS +LAE+ IPEHEL+RLRN++LRM ER KVG+AG+T
Sbjct: 231 --------LPWKRNTDRRR---RSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGIT 279
Query: 1113 QALVDTIHEKWKIDEVVKLKFEGPSMLNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLTY 1292
QALVD+IHEKWK+DEVVKLKFE P L MKR H++LE +TGGLVIWRSGSSVVLFRG+ Y
Sbjct: 280 QALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 339
Query: 1293 NLDCVRTFMEEK----------KVNLDFSPHP-----KNHVYDSLKLRKTLXXXXXXXXX 1427
L CV++F + +V + HP +++V DS + L
Sbjct: 340 KLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLC 399
Query: 1428 XXDKMLDELGPRYVDWSGXXXXXXXXXXXXXXXXGYKTPFRRCPYGVRLRLRDEETTQFR 1607
+ +LDELGPR+ DW G YK P R PYG++ LRD ETT+FR
Sbjct: 400 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 459
Query: 1608 RTARITHPHFALGRSRELQGLAAAMVKLWETSAIAKIVIKRGVLNTNNERMAEELKRLTG 1787
R AR T PHFALGR+RELQGLA AMVKLWE SAIAKI IKR V+NT NERMAEELK+LTG
Sbjct: 460 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 519
Query: 1788 GTLLSRNKEYIVFYRGNDFLPPKVAESLKEREKMTML-QYQEEEARRNASAMINSSYKLH 1964
GTLL RNK+YIVFYRGNDFLPP V +++KER K+T + Q +EE+AR ASA+I K
Sbjct: 520 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEEQARHVASALIELKAKGF 579
Query: 1965 KVPMVAGTLAETIAATSQWGKQPSNEDVKKMMQDSALVRRASLVKYXXXXXXXXXXXXXX 2144
+VAGTLAET+AATS+WG+QPS EDV+KMM+DS L R ASL++Y
Sbjct: 580 VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKM 639
Query: 2145 XXXXXXXVQGYXXXXXXXXXXXXXXXXXRLIFRKMGLSMKPFLLVGRRDVFDGTIENVHL 2324
VQ R + RKMGLSMKP+LL+GRR ++DGTIEN+HL
Sbjct: 640 ADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHL 699
Query: 2325 HWKFRELVKVIVKGKNFKQVKQVAINLEAESGGVLVSIDRTTKGYAIIIYRGKNYRQPIQ 2504
HWK+RELVK+IVKGK+F QVKQ+AI+LEAESGGVLVS+D+T KG AII+YRGKNY +P++
Sbjct: 700 HWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLK 759
Query: 2505 LRARNLLTKRQALARSIELQRREGLKHHISSLQEQMELLKS 2627
LR +NLL +RQALARS+ELQRREGLKHHI L+E++EL+KS
Sbjct: 760 LRPQNLLNRRQALARSVELQRREGLKHHILDLEERIELVKS 800
>ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568843115|ref|XP_006475467.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568843117|ref|XP_006475468.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X3 [Citrus sinensis]
gi|568843119|ref|XP_006475469.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X4 [Citrus sinensis]
Length = 812
Score = 644 bits (1662), Expect = 0.0
Identities = 398/881 (45%), Positives = 509/881 (57%), Gaps = 27/881 (3%)
Frame = +3
Query: 66 PLTHFPVFFKPLKLKPCCHNTTQTETQKT--QHLNIDFVVH--KKKRKPKPSFYDQIRGK 233
PLT V + PLK + C N+ ++ HL I + + KRK KPSF++QIR K
Sbjct: 15 PLTQPAVHYLPLKPQSQCSNSFRSIRIGICFSHLTIQAQLGTTRTKRKVKPSFFEQIRHK 74
Query: 234 WSAKPISITKKFPWXXXXXXXXXXXXXXXXXXXAVEIQEEKDSNSGISNFGVKSPNLSDK 413
WS K IS +KFPW QEE++ + N P
Sbjct: 75 WSHKVISPREKFPW-----------------------QEEEEEEEEVQN----EPE---- 103
Query: 414 LIDGTKIEEPIFGFDRNLSNTVSLPDNSALDNGLCSS-FVEEEKLTETKL------VSTS 572
T +E S S P +SAL N S+ ++ E K ++T
Sbjct: 104 ----TDVE----------SRVRSEPFSSALPNRFVSAPWIHGTDSKEIKFDSPQTKITTK 149
Query: 573 RNHNGSKKVYNVVDKLVAYKSNVEKNSVFDIEQEDSKVTSYGTKYDVDNANWKNNVAKVS 752
+ G + +K V + S V++ +V ++++E Y + D N ++S
Sbjct: 150 KEDIGDDGLLGSFEKTVVH-SAVKEKTVIELDKEGD----YNKELKTDEVKIDANPIELS 204
Query: 753 VLEHSEVTLSSNKYDVDNAHLKDNIAVIKVQEDSEVTLSSSEYDTASGNSDVDKARDEKL 932
H EV S N+ + H D+ +V
Sbjct: 205 KDRHREVG-SLNQKQIKGYHEVDDPSV--------------------------------- 230
Query: 933 ADGKNTDRLPWISENDSEKKEVRSKMKLAEERIPEHELKRLRNVALRMKERLKVGAAGVT 1112
LPW D + RS +LAE+ IPEHEL+RLRN++LRM ER KVG+AG+T
Sbjct: 231 --------LPWKRNTDRRR---RSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGIT 279
Query: 1113 QALVDTIHEKWKIDEVVKLKFEGPSMLNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLTY 1292
QALVD+IHEKWK+DEVVKLKFE P L MKR H++LE +TGGLVIWRSGSSVVLFRG+ Y
Sbjct: 280 QALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 339
Query: 1293 NLDCVRTFMEEK----------KVNLDFSPHP-----KNHVYDSLKLRKTLXXXXXXXXX 1427
L CV++F + +V + HP +++V DS + L
Sbjct: 340 KLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLC 399
Query: 1428 XXDKMLDELGPRYVDWSGXXXXXXXXXXXXXXXXGYKTPFRRCPYGVRLRLRDEETTQFR 1607
+ +LDELGPR+ DW G YK P R PYG++ LRD ETT+FR
Sbjct: 400 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 459
Query: 1608 RTARITHPHFALGRSRELQGLAAAMVKLWETSAIAKIVIKRGVLNTNNERMAEELKRLTG 1787
R AR T PHFALGR+RELQGLA AMVKLWE SAIAKI IKR V+NT NERMAEELK+LTG
Sbjct: 460 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 519
Query: 1788 GTLLSRNKEYIVFYRGNDFLPPKVAESLKEREKMTML-QYQEEEARRNASAMINSSYKLH 1964
GTLL RNK+YIVFYRGNDFLPP V +++KER K+T + Q +EE+AR ASA+I K
Sbjct: 520 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEEQARHVASALIELKAKGF 579
Query: 1965 KVPMVAGTLAETIAATSQWGKQPSNEDVKKMMQDSALVRRASLVKYXXXXXXXXXXXXXX 2144
+VAGTLAET+AATS+WG+QPS EDV+KMM+DS L R ASL++Y
Sbjct: 580 VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKM 639
Query: 2145 XXXXXXXVQGYXXXXXXXXXXXXXXXXXRLIFRKMGLSMKPFLLVGRRDVFDGTIENVHL 2324
VQ R + RKMGLSMKP+LL+GRR ++DGTIEN+HL
Sbjct: 640 ADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHL 699
Query: 2325 HWKFRELVKVIVKGKNFKQVKQVAINLEAESGGVLVSIDRTTKGYAIIIYRGKNYRQPIQ 2504
HWK+RELVK+IVKGK+F QVKQ+AI+LEAESGGVLVS+D+T KG AII+YRGKNY +P++
Sbjct: 700 HWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLK 759
Query: 2505 LRARNLLTKRQALARSIELQRREGLKHHISSLQEQMELLKS 2627
LR +NLL +RQALARS+ELQRREGLKHHI L+E++EL+KS
Sbjct: 760 LRPQNLLNRRQALARSVELQRREGLKHHILDLEERIELVKS 800
>ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citrus clementina]
gi|557554714|gb|ESR64728.1| hypothetical protein
CICLE_v10007477mg [Citrus clementina]
Length = 810
Score = 644 bits (1662), Expect = 0.0
Identities = 398/881 (45%), Positives = 509/881 (57%), Gaps = 27/881 (3%)
Frame = +3
Query: 66 PLTHFPVFFKPLKLKPCCHNTTQTETQKT--QHLNIDFVVH--KKKRKPKPSFYDQIRGK 233
PLT V + PLK + C N+ ++ HL I + + KRK KPSF++QIR K
Sbjct: 13 PLTQPAVHYLPLKPQSQCSNSFRSIRIGICFSHLTIQAQLGTTRTKRKVKPSFFEQIRHK 72
Query: 234 WSAKPISITKKFPWXXXXXXXXXXXXXXXXXXXAVEIQEEKDSNSGISNFGVKSPNLSDK 413
WS K IS +KFPW QEE++ + N P
Sbjct: 73 WSHKVISPREKFPW-----------------------QEEEEEEEEVQN----EPE---- 101
Query: 414 LIDGTKIEEPIFGFDRNLSNTVSLPDNSALDNGLCSS-FVEEEKLTETKL------VSTS 572
T +E S S P +SAL N S+ ++ E K ++T
Sbjct: 102 ----TDVE----------SRVRSEPFSSALPNRFVSAPWIHGTDSKEIKFDSPQTKITTK 147
Query: 573 RNHNGSKKVYNVVDKLVAYKSNVEKNSVFDIEQEDSKVTSYGTKYDVDNANWKNNVAKVS 752
+ G + +K V + S V++ +V ++++E Y + D N ++S
Sbjct: 148 KEDIGDDGLLGSFEKTVVH-SAVKEKTVIELDKEGD----YNKELKTDEVKIDANPIELS 202
Query: 753 VLEHSEVTLSSNKYDVDNAHLKDNIAVIKVQEDSEVTLSSSEYDTASGNSDVDKARDEKL 932
H EV S N+ + H D+ +V
Sbjct: 203 KDRHREVG-SLNQKQIKGYHEVDDPSV--------------------------------- 228
Query: 933 ADGKNTDRLPWISENDSEKKEVRSKMKLAEERIPEHELKRLRNVALRMKERLKVGAAGVT 1112
LPW D + RS +LAE+ IPEHEL+RLRN++LRM ER KVG+AG+T
Sbjct: 229 --------LPWKRNTDRRR---RSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGIT 277
Query: 1113 QALVDTIHEKWKIDEVVKLKFEGPSMLNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLTY 1292
QALVD+IHEKWK+DEVVKLKFE P L MKR H++LE +TGGLVIWRSGSSVVLFRG+ Y
Sbjct: 278 QALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
Query: 1293 NLDCVRTFMEEK----------KVNLDFSPHP-----KNHVYDSLKLRKTLXXXXXXXXX 1427
L CV++F + +V + HP +++V DS + L
Sbjct: 338 KLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLC 397
Query: 1428 XXDKMLDELGPRYVDWSGXXXXXXXXXXXXXXXXGYKTPFRRCPYGVRLRLRDEETTQFR 1607
+ +LDELGPR+ DW G YK P R PYG++ LRD ETT+FR
Sbjct: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
Query: 1608 RTARITHPHFALGRSRELQGLAAAMVKLWETSAIAKIVIKRGVLNTNNERMAEELKRLTG 1787
R AR T PHFALGR+RELQGLA AMVKLWE SAIAKI IKR V+NT NERMAEELK+LTG
Sbjct: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
Query: 1788 GTLLSRNKEYIVFYRGNDFLPPKVAESLKEREKMTML-QYQEEEARRNASAMINSSYKLH 1964
GTLL RNK+YIVFYRGNDFLPP V +++KER K+T + Q +EE+AR ASA+I K
Sbjct: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEEQARHVASALIELKAKGF 577
Query: 1965 KVPMVAGTLAETIAATSQWGKQPSNEDVKKMMQDSALVRRASLVKYXXXXXXXXXXXXXX 2144
+VAGTLAET+AATS+WG+QPS EDV+KMM+DS L R ASL++Y
Sbjct: 578 VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKM 637
Query: 2145 XXXXXXXVQGYXXXXXXXXXXXXXXXXXRLIFRKMGLSMKPFLLVGRRDVFDGTIENVHL 2324
VQ R + RKMGLSMKP+LL+GRR ++DGTIEN+HL
Sbjct: 638 ADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHL 697
Query: 2325 HWKFRELVKVIVKGKNFKQVKQVAINLEAESGGVLVSIDRTTKGYAIIIYRGKNYRQPIQ 2504
HWK+RELVK+IVKGK+F QVKQ+AI+LEAESGGVLVS+D+T KG AII+YRGKNY +P++
Sbjct: 698 HWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLK 757
Query: 2505 LRARNLLTKRQALARSIELQRREGLKHHISSLQEQMELLKS 2627
LR +NLL +RQALARS+ELQRREGLKHHI L+E++EL+KS
Sbjct: 758 LRPQNLLNRRQALARSVELQRREGLKHHILDLEERIELVKS 798
>ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
gi|223546576|gb|EEF48074.1| conserved hypothetical
protein [Ricinus communis]
Length = 930
Score = 643 bits (1659), Expect = 0.0
Identities = 394/913 (43%), Positives = 513/913 (56%), Gaps = 30/913 (3%)
Frame = +3
Query: 57 STKPLTHFPVFFKPLKLKPCCHNTTQTETQKTQHLNIDFVVHKKKRKPKPSFYDQIRGKW 236
S+ + +P+F + P ET + +I K KRKP+PSF++QIR KW
Sbjct: 38 SSSSSSRYPLFLQARSHSP--FKAFNFETNCSYSRSIQVSATKTKRKPRPSFFEQIRDKW 95
Query: 237 SAKPISITKKFPWXXXXXXXXXXXXXXXXXXXAVEIQEEKDSNSGISNFGVKSPNLSDKL 416
S K S FPW E Q+E ++ +S
Sbjct: 96 SLKVPSTRDTFPWQEP------------------EQQQEHQGQGKNDEEEIERCEISGVT 137
Query: 417 IDGTKIEEPIFGFDRNLSNTVSLPDNSALDNGLCSSFVEEEKLTETKLVSTSRNHNGSKK 596
+ +I+ D + S +VSLP++ + + ++ + SR G
Sbjct: 138 LSKAEIDANPSSIDDD-SVSVSLPNHLTTAPWVHGTRPKKNHFS-------SRPKIGENV 189
Query: 597 VYNVVDKLVAYKSNVEKNSVFD--IEQEDSKVTSYGTKYDVDNANW--KNNVAKVSVLEH 764
V N V +V N+EK + ++ED+ + + V N+ K AKV V
Sbjct: 190 VQNDVHTVVDIVENLEKEVTCNDKFKKEDNILHVDNAERLVKEVNYDKKFKEAKVQVGGF 249
Query: 765 SEVTLSSNKYDVDNAHLKDNIAVIKVQEDSEVTLSSSEYDTASGNSDVDKARDEKLADGK 944
S LK + + + + + + + A+G V + D D
Sbjct: 250 S-------------VELKRDNEIARAKYSKSPSYINEKPFGANGGYGVQVSYD----DNS 292
Query: 945 NTDRLPWISENDSEKKE-----VRSKMKLAEERIPEHELKRLRNVALRMKERLKVGAAGV 1109
++ LPW E E E RS +LAE +PEHELKRLRNVALRM ER+KVGAAG+
Sbjct: 293 SSIELPWEKERVMESVEGYLRGKRSNTELAERMLPEHELKRLRNVALRMYERIKVGAAGI 352
Query: 1110 TQALVDTIHEKWKIDEVVKLKFEGPSMLNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLT 1289
Q LVD +HEKW++DEVVKLKFE P NM+R H++LE++TGGLVIWRSGSSVVL+RG++
Sbjct: 353 NQDLVDAVHEKWRLDEVVKLKFEEPLSFNMRRTHEILENRTGGLVIWRSGSSVVLYRGIS 412
Query: 1290 YNLDCVRTFMEEKKVNLDFSPHPK--------------------NHVYDSLKLRKTLXXX 1409
Y L CVR+F ++ + + HP+ +++ D K K L
Sbjct: 413 YKLHCVRSFSKQDEAGKEILAHPEEVTSNATLNIGVKHFIGTTESYIPDRAKYLKDLSRE 472
Query: 1410 XXXXXXXXDKMLDELGPRYVDWSGXXXXXXXXXXXXXXXXGYKTPFRRCPYGVRLRLRDE 1589
++ LDELGPR+ DW G GYK PFR PYGVR L D+
Sbjct: 473 ELTDFTELNQFLDELGPRFEDWCGREPLPVDADLLLAVDPGYKPPFRLLPYGVRHCLTDK 532
Query: 1590 ETTQFRRTARITHPHFALGRSRELQGLAAAMVKLWETSAIAKIVIKRGVLNTNNERMAEE 1769
E T FRR AR PHFALGR+R+LQGLA A+VKLWE SAI KI IKRGV NT NERMAEE
Sbjct: 533 EMTIFRRLARTVPPHFALGRNRQLQGLAKAIVKLWERSAIVKIAIKRGVQNTRNERMAEE 592
Query: 1770 LKRLTGGTLLSRNKEYIVFYRGNDFLPPKVAESLKEREKMTML-QYQEEEARRNASAMIN 1946
LK LTGG LLSRNKEYIVFYRGNDFLPP + ++LKER+K+T L Q +EE+AR+ A A +
Sbjct: 593 LKVLTGGILLSRNKEYIVFYRGNDFLPPAIVKTLKERKKLTYLKQDEEEQARQMALASVE 652
Query: 1947 SSYKLHKVPMVAGTLAETIAATSQWGKQPSNEDVKKMMQDSALVRRASLVKYXXXXXXXX 2126
SS K KVP+VAGTLAET+AATS W Q + D+ +M++++ L +RASLVK+
Sbjct: 653 SSAKTSKVPLVAGTLAETVAATSHWRDQRGSPDIDEMLREAVLAKRASLVKHLENKLALA 712
Query: 2127 XXXXXXXXXXXXXVQGYXXXXXXXXXXXXXXXXXRLIFRKMGLSMKPFLLVGRRDVFDGT 2306
V + R +FRK+GLSMKP+L +G+R V+DGT
Sbjct: 713 KGKLRKAEKALAKVHEHLDPSGLPTDLETISDEERFLFRKIGLSMKPYLFLGKRGVYDGT 772
Query: 2307 IENVHLHWKFRELVKVIVKGKNFKQVKQVAINLEAESGGVLVSIDRTTKGYAIIIYRGKN 2486
IEN+HLHWK+RELVKVIV+GK+F QVK +AI+LEAESGGVLVSI+RTTKGYAII+YRGKN
Sbjct: 773 IENMHLHWKYRELVKVIVRGKSFAQVKHIAISLEAESGGVLVSIERTTKGYAIIVYRGKN 832
Query: 2487 YRQPIQLRARNLLTKRQALARSIELQRREGLKHHISSLQEQMELLKSXXXXXXXXXXXXX 2666
Y P +R +NLLTKRQAL RSIELQRRE LKHHIS LQE++ELLK
Sbjct: 833 YLHPEVMRPKNLLTKRQALVRSIELQRREALKHHISDLQERIELLKLELEDMESGKEIDV 892
Query: 2667 XTFYEKLDNSILS 2705
+LD+S +S
Sbjct: 893 DKMSSRLDDSSIS 905
>ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Populus trichocarpa]
gi|550336383|gb|EEE92740.2| hypothetical protein
POPTR_0006s15340g [Populus trichocarpa]
Length = 977
Score = 640 bits (1651), Expect = e-180
Identities = 405/939 (43%), Positives = 525/939 (55%), Gaps = 75/939 (7%)
Frame = +3
Query: 36 FNPCFSLSTKPLTHFPVFFKPLKLKPCCHNTTQTETQKTQHLNIDFVVHKKKRKPKPSFY 215
F+ C S S PL P P+ K TT + +T ++ K KRKPKPSF+
Sbjct: 5 FHTCIS-SLNPLLLQPQNPSPITFK----FTTYCPSNRTVQVH----AAKSKRKPKPSFF 55
Query: 216 DQIRGKWSAKPISITKKFPWXXXXXXXXXXXXXXXXXXXAVEIQEEKD--------SNSG 371
+QI KWS K S KFPW E +EE+D S S
Sbjct: 56 EQIHHKWSLKLTSTRDKFPWQEQEQQQQQQQEEE-------EEEEEEDIKEVDAVPSVSD 108
Query: 372 ISNFGVKSPNLSDKLIDGTKIEEPIFGFD-RNLSNTVSLPDNSALDNGLCSSFVEEEKLT 548
+F + + + I G ++ F + R N++ + DN + +EE++
Sbjct: 109 TVSFNLPNRLTTPPWIHGATPKQAHFDYQPRKGDNSIHGVFENREDNVVNGVIDKEERIE 168
Query: 549 ETKLVSTSRNHNGSKKVYNVVDKLV---------------AYKSNVEKNSVFDIEQEDS- 680
+ + ++N ++V + D V Y N E+++ + +ED+
Sbjct: 169 K----EVNLDNNFKEQVVDFDDASVFQLPEAKEIKDCSVHRYAENREEDNAEEDSREDNV 224
Query: 681 --KVTSYGTKYDVDNANWK-----NNVAKVSVLEHSEVT-------LSSNKYDVDNAHLK 818
K S G K + + +K N+V E S VT L+ +D D+
Sbjct: 225 ANKKESVGKKINCNLNKFKDKHYYNSVELPGDKEKSIVTDLNDVVSLTEKPFDGDDGDFG 284
Query: 819 DNIAVIKVQEDSEVTLSSSEYDTASGNSDVDKARDEKLADGKNTD----------RLPW- 965
+ I+V D S E + ++DV ++L D +N + LPW
Sbjct: 285 N----IEVCNDGHC--DSFENLSCKDSNDVVSVSKKQLGDFENVEVSNNGVSNSNELPWK 338
Query: 966 ----ISENDSEKKEVRSKMKLAEERIPEHELKRLRNVALRMKERLKVGAAGVTQALVDTI 1133
+ +K +S LAE +PEHELKRLRNVALRM ER+KVGA G+TQ LVD I
Sbjct: 339 RTSGLDSLGEDKSRKKSNTDLAERMLPEHELKRLRNVALRMLERIKVGATGITQDLVDAI 398
Query: 1134 HEKWKIDEVVKLKFEGPSMLNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLTYNLDCVRT 1313
HEKWK+DEVVKLKFE P NMKR H++LES+TGGL+IWRSGSSVV++RG TY CV++
Sbjct: 399 HEKWKLDEVVKLKFEWPLSCNMKRTHEILESRTGGLIIWRSGSSVVMYRGTTYKFQCVQS 458
Query: 1314 FMEEKKVNLDFSPHPKNH--------------------VYDSLKLRKTLXXXXXXXXXXX 1433
+ ++ + +D + + + D+ K K L
Sbjct: 459 YTKQNEAGMDVLQYAEEATNSATSSAGMKDLARTMESIIPDAAKYLKDLSQEELMDFSEL 518
Query: 1434 DKMLDELGPRYVDWSGXXXXXXXXXXXXXXXXGYKTPFRRCPYGVRLRLRDEETTQFRRT 1613
+ +LDELGPRY DW G GYK+P R PYGV+ L ++ TT FRR
Sbjct: 519 NHLLDELGPRYKDWCGREPLPVDADLLPAVVPGYKSPLRLLPYGVKPCLSNKNTTNFRRL 578
Query: 1614 ARITHPHFALGRSRELQGLAAAMVKLWETSAIAKIVIKRGVLNTNNERMAEELKRLTGGT 1793
AR T PHF LGR+RELQGLA AMVKLWE SAIAKI IKRGV T NE MAEELKRLTGGT
Sbjct: 579 ARTTPPHFVLGRNRELQGLANAMVKLWERSAIAKIAIKRGVQYTRNEIMAEELKRLTGGT 638
Query: 1794 LLSRNKEYIVFYRGNDFLPPKVAESLKEREKMTML-QYQEEEARRNASAMINSSYKLHKV 1970
LLSRNKEYIVFYRGNDFLPP + E+LKER K+ L Q +E++AR+ SA I SS K K
Sbjct: 639 LLSRNKEYIVFYRGNDFLPPVINETLKERRKLAFLYQDEEDQARQMTSAFIGSSVKTTKG 698
Query: 1971 PMVAGTLAETIAATSQWGKQPSNEDVKKMMQDSALVRRASLVKYXXXXXXXXXXXXXXXX 2150
P+VAGTL ET+AA S+WG QPS+EDV++M++DSAL R ASLVK+
Sbjct: 699 PLVAGTLVETVAAISRWGNQPSSEDVEEMIRDSALARHASLVKHLENKLAQAKGKLKKSE 758
Query: 2151 XXXXXVQGYXXXXXXXXXXXXXXXXXRLIFRKMGLSMKPFLLVGRRDVFDGTIENVHLHW 2330
VQ R +FRK+GLSMKP+L +GRR VFDGTIEN+HLHW
Sbjct: 759 KDLAKVQENLEPTELPTDLETISDEERFLFRKIGLSMKPYLFLGRRGVFDGTIENMHLHW 818
Query: 2331 KFRELVKVIVKGKNFKQVKQVAINLEAESGGVLVSIDRTTKGYAIIIYRGKNYRQPIQLR 2510
K+RELVK+IV+ K QVK +AI+LEAESGGVLVS+DRTTKGYAII+YRGKNY +P +R
Sbjct: 819 KYRELVKIIVERKGIAQVKHIAISLEAESGGVLVSVDRTTKGYAIIVYRGKNYMRPQAMR 878
Query: 2511 ARNLLTKRQALARSIELQRREGLKHHISSLQEQMELLKS 2627
NLLT+RQALARS+ELQR E LKHHI+ LQE++EL+ S
Sbjct: 879 PENLLTRRQALARSVELQRYEALKHHITDLQERIELVTS 917
>ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Cucumis sativus]
Length = 846
Score = 640 bits (1650), Expect = e-180
Identities = 390/876 (44%), Positives = 511/876 (58%), Gaps = 28/876 (3%)
Frame = +3
Query: 84 VFFKPLKLK-PCCHNTTQTETQKTQHLNIDFVVHKKKRKPKPSFYDQIRGKWSAKPISIT 260
+ F P + K C +NT Q ETQ + + +DF V KKKRKP+PSF +QIR KWS KPIS T
Sbjct: 39 IIFTPQRFKIHCSNNTIQVETQPPRRIRVDFEV-KKKRKPRPSFLEQIRHKWSTKPISST 97
Query: 261 KKFPWXXXXXXXXXXXXXXXXXXXAVEIQEEKDSNSGISNFGVKSPNLSDKLIDGTKIEE 440
FPW Q+E+D + K +G EE
Sbjct: 98 HTFPWQ----------------------QQEQDRH--------------HKQDEGEGEEE 121
Query: 441 PIFGFDRNLSNT-VSLPDNSALDNGLCSSFVEEEKLTETKLVSTSRNHNGSKKVYNVVDK 617
++ + T VS+P+ S+ + + T+ +S H GS+ D
Sbjct: 122 EEEEEEQVANQTSVSIPE---------STTDVTQAVPITRSISAPWAH-GSQSRNTQFD- 170
Query: 618 LVAYKSNVEKNSVFDIEQEDSKVTSYGTKYDVDNANWKNNVAKVSVLEHSEVTLSSNKYD 797
+K V + E SK+++ T N + +S+ E S+ + S ++ +
Sbjct: 171 ---FKPKTPNGEVIN---EISKISTDDTS--------NRNASTISIDEISDDS-SEDEAE 215
Query: 798 VDNAHLKDNIAVIKVQEDSEVTLSSSEYDTASGNSDVDKARDEKLADGKNTDRLPWISE- 974
+D V+ + TLS + S ++D D R + LPW E
Sbjct: 216 ID--------TVVLPVTEKRSTLSKKIVHSVSSDND-DNGRVD----------LPWKREP 256
Query: 975 -NDSE--KKEVRSKMKLAEERIPEHELKRLRNVALRMKERLKVGAAGVTQALVDTIHEKW 1145
DSE + RSK LAE+ +PEHEL+RLRN++LRM ER++VG G+TQ L+D+IHEKW
Sbjct: 257 RRDSEVDAGQRRSKTLLAEQMLPEHELRRLRNISLRMVERIEVGVKGITQELLDSIHEKW 316
Query: 1146 KIDEVVKLKFEGPSMLNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLTYNLDCVRTFMEE 1325
K+DEVVKLKFEGP +NMKR H+ LE++TGGLVIWRSGS +VL+RG+TY+L CV+++ ++
Sbjct: 317 KVDEVVKLKFEGPLTVNMKRAHEKLENRTGGLVIWRSGSLIVLYRGMTYHLPCVQSYAKQ 376
Query: 1326 KKVNLDFSPHPKNHVYDSL---------------------KLRKTLXXXXXXXXXXXDKM 1442
+ + P N D + K KTL + +
Sbjct: 377 NQAKSNTLDVPNNVESDDITRNEKLHTTVGTMSTIVSGASKHTKTLSKKELMELSDLNHL 436
Query: 1443 LDELGPRYVDWSGXXXXXXXXXXXXXXXXGYKTPFRRCPYGVRLRLRDEETTQFRRTARI 1622
LDE+GPR+ DWSG GYK P R PYGVR LR++E T FRR AR
Sbjct: 437 LDEIGPRFKDWSGCEPVPVDADLLPGIVPGYKPPTRILPYGVRHCLRNKEVTIFRRLARK 496
Query: 1623 THPHFALGRSRELQGLAAAMVKLWETSAIAKIVIKRGVLNTNNERMAEELKRLTGGTLLS 1802
PHFALGR+R+LQGLA AMVKLWE AIAKI IKRGV NT NERMAEEL+ LTGGTLLS
Sbjct: 497 MPPHFALGRNRQLQGLANAMVKLWEKCAIAKIAIKRGVENTRNERMAEELRILTGGTLLS 556
Query: 1803 RNKEYIVFYRGNDFLPPKVAESLKEREKMTMLQYQ-EEEARRNASAMINSSYKLHKVPMV 1979
RNKEYIVFYRGND+LPP + E+LKER K+ Q EE+ R+ ASA I S K P+V
Sbjct: 557 RNKEYIVFYRGNDYLPPTITEALKERRKLADRQQDVEEQVRQVASAAIESKVKASNAPLV 616
Query: 1980 AGTLAETIAATSQWGKQPSNEDVKKMMQDSALVRRASLVKYXXXXXXXXXXXXXXXXXXX 2159
AGTL ETIAATS+WG QPS D++ M +DSAL + SL++Y
Sbjct: 617 AGTLTETIAATSRWGSQPSGHDIENMREDSALAKLDSLIEYLKKKLALAKCKVKNAEKII 676
Query: 2160 XXVQGYXXXXXXXXXXXXXXXXXRLIFRKMGLSMKPFLLVGRRDVFDGTIENVHLHWKFR 2339
+Q RL+FRK+GLSMKP+LL+GRR V+DGT+EN+HLHWKFR
Sbjct: 677 AKLQEKKEPSDLPTDLETITDEERLLFRKIGLSMKPYLLLGRRGVYDGTVENMHLHWKFR 736
Query: 2340 ELVKVIVKGKNFKQVKQVAINLEAESGGVLVSIDRTTKGYAIIIYRGKNYRQPIQLRARN 2519
ELVK+IV+GK +QVK VAI+LEAES GV++S+D+TTKGY +I+YRGKNY +P +R +N
Sbjct: 737 ELVKIIVRGKTLQQVKHVAISLEAESNGVVISLDKTTKGYEVIVYRGKNYTRPDAMRPKN 796
Query: 2520 LLTKRQALARSIELQRREGLKHHISSLQEQMELLKS 2627
+LT+RQALARSIELQRRE LKHHI L+E++ELLK+
Sbjct: 797 MLTRRQALARSIELQRREALKHHILDLEEKIELLKA 832
>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 639 bits (1648), Expect = e-180
Identities = 349/680 (51%), Positives = 436/680 (64%), Gaps = 25/680 (3%)
Frame = +3
Query: 834 IKVQEDSEVTLSSSEYDTASGNSDVDKARDEKLADGKNTDRLPWISENDSEKKEV----R 1001
+ V+ + E+ ++ + D D E + + LPW + E R
Sbjct: 195 VNVKTEIEMGDANVSLNEKPPGGDEDFGNFEGFSGNSSLIELPWKRREGLQPVERDGWGR 254
Query: 1002 SKMKLAEERIPEHELKRLRNVALRMKERLKVGAAGVTQALVDTIHEKWKIDEVVKLKFEG 1181
++AE +PEHEL+RL+N+ALRM ER+KVGAAGVTQ+LVD IHEKW+ DEVVKLKFEG
Sbjct: 255 RNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDAIHEKWRKDEVVKLKFEG 314
Query: 1182 PSMLNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLTYNLDCVRTFMEEKKVNLDFSPHPK 1361
PS NMKR H++LE++TGGLVIWR+GSSVVL+RG+ Y L CV++++++++ N++ S + +
Sbjct: 315 PSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMAYKLHCVQSYIKQERDNVNISEYSQ 374
Query: 1362 NH--------------------VYDSLKLRKTLXXXXXXXXXXXDKMLDELGPRYVDWSG 1481
+ + DS + K L + +LDELGPR+ DWSG
Sbjct: 375 DAANVIIQDIGVKDIVKTTESVISDSARYLKDLSEEELMDLSELNHLLDELGPRFKDWSG 434
Query: 1482 XXXXXXXXXXXXXXXXGYKTPFRRCPYGVRLRLRDEETTQFRRTARITHPHFALGRSREL 1661
YK PFR PYG+R LR+ E T RR AR PHFALGRSREL
Sbjct: 435 REPLPVDADLLPSVVHEYKPPFRLLPYGMRHCLRNREMTFIRRLARTMPPHFALGRSREL 494
Query: 1662 QGLAAAMVKLWETSAIAKIVIKRGVLNTNNERMAEELKRLTGGTLLSRNKEYIVFYRGND 1841
QGLA AMVKLWE SAIAKI IKRGV NT N+RMAEELK LTGGTL+SRNK+YIVFYRGND
Sbjct: 495 QGLAMAMVKLWERSAIAKIAIKRGVQNTCNDRMAEELKNLTGGTLVSRNKDYIVFYRGND 554
Query: 1842 FLPPKVAESLKEREKMTMLQYQEEE-ARRNASAMINSSYKLHKVPMVAGTLAETIAATSQ 2018
FLPP V E+LKER K+ LQ EEE AR ASA+I+S + K P+VAGTLAET+AATS+
Sbjct: 555 FLPPHVMEALKERRKLRDLQQDEEEQARHRASALIDSKARSAKGPLVAGTLAETLAATSR 614
Query: 2019 WGKQPSNEDVKKMMQDSALVRRASLVKYXXXXXXXXXXXXXXXXXXXXXVQGYXXXXXXX 2198
WG +PS EDV KM++DSAL R ASLV+Y VQ
Sbjct: 615 WGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAHAKAKLKKTEKALRKVQEDLEPAELP 674
Query: 2199 XXXXXXXXXXRLIFRKMGLSMKPFLLVGRRDVFDGTIENVHLHWKFRELVKVIVKGKNFK 2378
R +FRK+GLSMKPFLL+G R +FDGT+EN+HLHWK+RELVK+IVKGKNF
Sbjct: 675 MDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWKYRELVKIIVKGKNFA 734
Query: 2379 QVKQVAINLEAESGGVLVSIDRTTKGYAIIIYRGKNYRQPIQLRARNLLTKRQALARSIE 2558
QVK +AI+LEAESGGVLVS+DRT KGYAII+YRGKNY++P LR +NLLTKRQALARSIE
Sbjct: 735 QVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRPHALRPKNLLTKRQALARSIE 794
Query: 2559 LQRREGLKHHISSLQEQMELLKSXXXXXXXXXXXXXXTFYEKLDNSILSXXXXXXXXXXX 2738
LQR E LKHHIS L+E+++LLKS FY +LD + +
Sbjct: 795 LQRHEALKHHISDLEERIKLLKSLPEEMKTGNGIDDKAFYSRLDGTYSTDEDMEEDEGEE 854
Query: 2739 AYLQTYESGDENGAFIDDEV 2798
AYL+ Y S D+ + E+
Sbjct: 855 AYLEIYGSEDKGSNIQNKEL 874
>ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like, partial [Cucumis sativus]
Length = 789
Score = 628 bits (1620), Expect = e-177
Identities = 383/857 (44%), Positives = 501/857 (58%), Gaps = 27/857 (3%)
Frame = +3
Query: 138 ETQKTQHLNIDFVVHKKKRKPKPSFYDQIRGKWSAKPISITKKFPWXXXXXXXXXXXXXX 317
ETQ + + +DF V KKKRKP+PSF +QIR KWS KPIS T FPW
Sbjct: 1 ETQPPRRIRVDFEV-KKKRKPRPSFLEQIRHKWSTKPISSTHTFPWQ------------- 46
Query: 318 XXXXXAVEIQEEKDSNSGISNFGVKSPNLSDKLIDGTKIEEPIFGFDRNLSNT-VSLPDN 494
Q+E+D + K +G EE ++ + T VS+P+
Sbjct: 47 ---------QQEQDRH--------------HKQDEGEGEEEEEEEEEQVANQTSVSIPE- 82
Query: 495 SALDNGLCSSFVEEEKLTETKLVSTSRNHNGSKKVYNVVDKLVAYKSNVEKNSVFDIEQE 674
S+ + + T+ +S H GS+ D +K V + E
Sbjct: 83 --------STTDVTQAVPITRSISAPWAH-GSQSRNTQFD----FKPKTPNGEVIN---E 126
Query: 675 DSKVTSYGTKYDVDNANWKNNVAKVSVLEHSEVTLSSNKYDVDNAHLKDNIAVIKVQEDS 854
SK+++ T N + +S+ E S+ + S ++ ++D V+ +
Sbjct: 127 ISKISTDDTS--------NRNASTISIDEISDDS-SEDEAEID--------TVVLPVTEK 169
Query: 855 EVTLSSSEYDTASGNSDVDKARDEKLADGKNTDRLPWISE--NDSE--KKEVRSKMKLAE 1022
TLS + S ++D D R + LPW E DSE + RSK LAE
Sbjct: 170 RSTLSKKIVHSVSSDND-DNGRVD----------LPWKREPRRDSEVDAGQRRSKTLLAE 218
Query: 1023 ERIPEHELKRLRNVALRMKERLKVGAAGVTQALVDTIHEKWKIDEVVKLKFEGPSMLNMK 1202
+ +PEHEL+RLRN++LRM ER++VG G+TQ L+D+IHEKWK+DEVVKLKFEGP +NMK
Sbjct: 219 QMLPEHELRRLRNISLRMVERIEVGVKGITQELLDSIHEKWKVDEVVKLKFEGPLTVNMK 278
Query: 1203 RIHDVLESKTGGLVIWRSGSSVVLFRGLTYNLDCVRTFMEEKKVNLDFSPHPKNHVYDSL 1382
R H+ LE++TGGLVIWRSGS +VL+RG+TY+L CV+++ ++ + + P N D +
Sbjct: 279 RAHEKLENRTGGLVIWRSGSLIVLYRGMTYHLPCVQSYAKQNQAKSNTLDVPNNVESDDI 338
Query: 1383 ---------------------KLRKTLXXXXXXXXXXXDKMLDELGPRYVDWSGXXXXXX 1499
K KTL + +LDE+GPR+ DWSG
Sbjct: 339 TRNEKLHTTVGTMSTIVSGASKHTKTLSKKELMELSDLNHLLDEIGPRFKDWSGCEPVPV 398
Query: 1500 XXXXXXXXXXGYKTPFRRCPYGVRLRLRDEETTQFRRTARITHPHFALGRSRELQGLAAA 1679
GYK P R PYGVR LR++E T FRR AR PHFALGR+R+LQGLA A
Sbjct: 399 DADLLPGIVPGYKPPTRILPYGVRHCLRNKEVTIFRRLARKMPPHFALGRNRQLQGLANA 458
Query: 1680 MVKLWETSAIAKIVIKRGVLNTNNERMAEELKRLTGGTLLSRNKEYIVFYRGNDFLPPKV 1859
MVKLWE AIAKI IKRGV NT NERMAEEL+ LTGGTLLSRNKEYIVFYRGND+LPP +
Sbjct: 459 MVKLWEKCAIAKIAIKRGVENTRNERMAEELRILTGGTLLSRNKEYIVFYRGNDYLPPTI 518
Query: 1860 AESLKEREKMTMLQYQ-EEEARRNASAMINSSYKLHKVPMVAGTLAETIAATSQWGKQPS 2036
E+LKER K+ Q EE+ R+ ASA I S K P+VAGTL ETIAATS+WG QPS
Sbjct: 519 TEALKERRKLADRQQDVEEQVRQVASAAIESKVKASNAPLVAGTLTETIAATSRWGSQPS 578
Query: 2037 NEDVKKMMQDSALVRRASLVKYXXXXXXXXXXXXXXXXXXXXXVQGYXXXXXXXXXXXXX 2216
D++ M +DSAL + SL++Y +Q
Sbjct: 579 GHDIENMREDSALAKLDSLIEYLKKKLALAKCKVKNAEKIIAKLQEKKEPSDLPTDLETI 638
Query: 2217 XXXXRLIFRKMGLSMKPFLLVGRRDVFDGTIENVHLHWKFRELVKVIVKGKNFKQVKQVA 2396
RL+FRK+GLSMKP+LL+GRR V+DGT+EN+HLHWKFRELVK+IV+GK +QVK VA
Sbjct: 639 TDEERLLFRKIGLSMKPYLLLGRRGVYDGTVENMHLHWKFRELVKIIVRGKTLQQVKHVA 698
Query: 2397 INLEAESGGVLVSIDRTTKGYAIIIYRGKNYRQPIQLRARNLLTKRQALARSIELQRREG 2576
I+LEAES GV++S+D+TTKGY +I+YRGKNY +P +R +N+LT+RQALARSIELQRRE
Sbjct: 699 ISLEAESNGVVISLDKTTKGYEVIVYRGKNYTRPDAMRPKNMLTRRQALARSIELQRREA 758
Query: 2577 LKHHISSLQEQMELLKS 2627
LKHHI L+E++ELLK+
Sbjct: 759 LKHHILDLEEKIELLKA 775
>ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Solanum tuberosum]
gi|565382761|ref|XP_006357700.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 820
Score = 623 bits (1606), Expect = e-175
Identities = 350/688 (50%), Positives = 448/688 (65%), Gaps = 19/688 (2%)
Frame = +3
Query: 690 SYGTKYDVDNANWKNNVA-KVSVLEHSEVTLSSNKYDVDNAHLKDNIAVIK-VQEDSEVT 863
S G++ V+ A W + K+S + S S + D +++ ++ K V D
Sbjct: 123 SSGSRVKVNLAPWVHGKQPKISQVGESSTVGKSLENCEDIGSIREQKSLNKQVNFDCAPL 182
Query: 864 LSSSEYDTASGNSDVDKAR---DEKLADGKNTDRLPWISENDSEKKEVRSKMKLAEERIP 1034
S + D KA D+ + + K++ RLPW E D +K S +LAE+ IP
Sbjct: 183 RSPQQQDFEKDIKLESKAEARVDKGITNAKDSVRLPW--EGDKLRK---SNAELAEKLIP 237
Query: 1035 EHELKRLRNVALRMKERLKVGAAGVTQALVDTIHEKWKIDEVVKLKFEGPSMLNMKRIHD 1214
E +LKRLRN ALRM ER+KVG+ GVTQ LVD+I +KWK+DE+VKL+FEGP NMKR HD
Sbjct: 238 EAQLKRLRNAALRMVERIKVGSGGVTQELVDSIQDKWKVDEIVKLRFEGPPSHNMKRTHD 297
Query: 1215 VLESKTGGLVIWRSGSSVVLFRGLTYNLDCVRTFMEEKKVNLDFSPHPKNHVYDSLKLR- 1391
+LE +TGGLVIWRSGSS+VL+RG++Y L CV++F K ++D S +P N SL ++
Sbjct: 298 ILEHRTGGLVIWRSGSSIVLYRGISYKLPCVQSFTS-KNHDVDESEYPNNDSCQSLGVKC 356
Query: 1392 ------------KTLXXXXXXXXXXXDKMLDELGPRYVDWSGXXXXXXXXXXXXXXXXGY 1535
L + +LDE+GPR+ DWSG GY
Sbjct: 357 LNEAAERPRNGSTDLSSEEIVDLSELNMILDEVGPRFKDWSGREPLPVDADLLPAVVPGY 416
Query: 1536 KTPFRRCPYGVRLRLRDEETTQFRRTARITHPHFALGRSRELQGLAAAMVKLWETSAIAK 1715
+ PFRR PYG +L L+++E T RRTARI PHFALGR+R+LQGLAAAMVKLW SAIAK
Sbjct: 417 RPPFRRLPYGAKLNLKNKEMTYLRRTARIMPPHFALGRNRQLQGLAAAMVKLWRRSAIAK 476
Query: 1716 IVIKRGVLNTNNERMAEELKRLTGGTLLSRNKEYIVFYRGNDFLPPKVAESLKERE-KMT 1892
I IKRGVLNT+NERM+EELK LTGGTLLSRNK+YIVFYRGNDFLPP+V E+L+E E K
Sbjct: 477 IAIKRGVLNTSNERMSEELKVLTGGTLLSRNKDYIVFYRGNDFLPPRVTEALEEAERKSD 536
Query: 1893 MLQYQEEEARRNASAMINSSYKLHKVPMVAGTLAETIAATSQWGKQPSNEDVKKMMQDSA 2072
LQ QEE+AR+ A I+S + K P+VAGTL+ET+AATS+WG QPS E+ +KMM+D+A
Sbjct: 537 FLQDQEEQARQRAVTSIDSDTRAPKRPLVAGTLSETMAATSRWGNQPSIEEREKMMRDAA 596
Query: 2073 LVRRASLVKYXXXXXXXXXXXXXXXXXXXXXVQGYXXXXXXXXXXXXXXXXXRLIFRKMG 2252
+ R ASLVKY +Q R +FRKMG
Sbjct: 597 VARHASLVKYLEEKLALAKGKVKKAENMLRKLQENREPSELPTDLEILSAEERFLFRKMG 656
Query: 2253 LSMKPFLLVGRRDVFDGTIENVHLHWKFRELVKVIVKGKNFKQVKQVAINLEAESGGVLV 2432
LSMKPFLL+GRRDVFDGTIEN+HLHWK+RELVK+I + +N Q+K +AI LEAESGG+LV
Sbjct: 657 LSMKPFLLLGRRDVFDGTIENIHLHWKYRELVKIIAERRNTAQIKHIAITLEAESGGLLV 716
Query: 2433 SIDRTTKGYAIIIYRGKNYRQPIQLRARNLLTKRQALARSIELQRREGLKHHISSLQEQM 2612
SID+TT+GYAII+YRGKNY++P + R +NLLTKRQALARSIELQRRE LKHHI++LQ+++
Sbjct: 717 SIDKTTQGYAIILYRGKNYQRPNEFRPKNLLTKRQALARSIELQRREALKHHITALQDKI 776
Query: 2613 ELLKSXXXXXXXXXXXXXXTFYEKLDNS 2696
+ LKS T + +LD S
Sbjct: 777 QNLKSELEDTNMVEEIDEETLFSRLDAS 804
>gb|EMJ04994.1| hypothetical protein PRUPE_ppa001111mg [Prunus persica]
Length = 906
Score = 618 bits (1594), Expect = e-174
Identities = 341/659 (51%), Positives = 426/659 (64%), Gaps = 28/659 (4%)
Frame = +3
Query: 882 DTASGNSDVDKARDEKLADGKNTDRLPW------ISENDSEKKEVRSKMKLAEERIPEHE 1043
+T SG+ + D+ + + G + RLPW SE + ++ RS +LAE +P+HE
Sbjct: 237 ETLSGDGENDEKVENFVYSGSGSIRLPWKRESELSSEEGDKTRKRRSNTELAERMLPDHE 296
Query: 1044 LKRLRNVALRMKERLKVGAAGVTQALVDTIHEKWKIDEVVKLKFEGPSMLNMKRIHDVLE 1223
L+RLRNV+LRM ER+KVG G+TQALV+TIHEKWKIDEVVKLKFE P LNMKR H++LE
Sbjct: 297 LRRLRNVSLRMLERIKVGVTGITQALVNTIHEKWKIDEVVKLKFEEPFSLNMKRTHEILE 356
Query: 1224 SKTGGLVIWRSGSSVVLFRGLTYNLDCVRTFMEEKKVNLDFSPHPKNHVYDSL------- 1382
SKTGGLVIWRSGSSVVL+RG+TYNL CV+T+ + + N H +N DS+
Sbjct: 357 SKTGGLVIWRSGSSVVLYRGMTYNLPCVQTYAKHSQTNSHMLQHSENATSDSMHNVGVKD 416
Query: 1383 -------------KLRKTLXXXXXXXXXXXDKMLDELGPRYVDWSGXXXXXXXXXXXXXX 1523
+ K L + +LDELGPR+ DW G
Sbjct: 417 VSRTTDFPSLESAEYLKDLSQRELMALNDLNHLLDELGPRFKDWIGREPLPVDADLLPSV 476
Query: 1524 XXGYKTPFRRCPYGVRLRLRDEETTQFRRTARITHPHFALGRSRELQGLAAAMVKLWETS 1703
GYKTPFR PYG R LRD++ T++RR AR PHFALG +RELQGLA AM+KLWE S
Sbjct: 477 VRGYKTPFRLLPYGFRPCLRDKDMTKYRRLARTVPPHFALGMNRELQGLANAMMKLWEKS 536
Query: 1704 AIAKIVIKRGVLNTNNERMAEELKRLTGGTLLSRNKEYIVFYRGNDFLPPKVAESLKERE 1883
AIAKI IKRGV NT NERMAEELKRLTGGTLLSRNK++IVFYRGND+LP V L+ER
Sbjct: 537 AIAKIAIKRGVQNTCNERMAEELKRLTGGTLLSRNKDFIVFYRGNDYLPSVVTGVLEERR 596
Query: 1884 KMTMLQYQEEE-ARRNASAMINSSYKLHKVPMVAGTLAETIAATSQWGKQPSNEDVKKMM 2060
K+ LQ EEE AR+ AS + S+ + K VAGTLAET+AAT+ W Q + + V+KM
Sbjct: 597 KLRDLQQDEEEQARQMASDYVVSNSEASKGQFVAGTLAETMAATTHWRNQLTIDKVEKMR 656
Query: 2061 QDSALVRRASLVKYXXXXXXXXXXXXXXXXXXXXXVQGYXXXXXXXXXXXXXXXXXRLIF 2240
+DS R ASLV++ VQ R +F
Sbjct: 657 RDSTFARHASLVRHLEKKLALGKGKLRKAEKALARVQESLEPSDLPDDLETLTDEDRFLF 716
Query: 2241 RKMGLSMKPFLLVGRRDVFDGTIENVHLHWKFRELVKVIVKGKNFKQVKQVAINLEAESG 2420
RK+GLSMKPFLL+GRR+V+ GTIEN+HLHWK +ELVK+IV+GK+F+QVK +AI+LEAESG
Sbjct: 717 RKIGLSMKPFLLLGRREVYSGTIENMHLHWKHKELVKIIVRGKSFEQVKHIAISLEAESG 776
Query: 2421 GVLVSIDRTTKGYAIIIYRGKNYRQPIQLRARNLLTKRQALARSIELQRREGLKHHISSL 2600
GVLVS+D+TTKGYAII+YRGKNY+ P+ LR RNLLT+RQALARS+ELQRRE LKHHIS L
Sbjct: 777 GVLVSLDKTTKGYAIILYRGKNYQCPLPLRPRNLLTRRQALARSVELQRREALKHHISDL 836
Query: 2601 QEQMELLKS-XXXXXXXXXXXXXXTFYEKLDNSILSXXXXXXXXXXXAYLQTYESGDEN 2774
QE++ LLKS T + D+ ++ AYL+ Y+SG+E+
Sbjct: 837 QEKVGLLKSELEEMGNGRMVDDGRTLHSTGDDPLIPSDDSEEDEGEEAYLEVYDSGNED 895
>ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Solanum lycopersicum]
Length = 812
Score = 612 bits (1578), Expect = e-172
Identities = 331/613 (53%), Positives = 416/613 (67%), Gaps = 14/613 (2%)
Frame = +3
Query: 900 SDVDKARDEKLADGKNTDRLPWISENDSEKKEVRSKMKLAEERIPEHELKRLRNVALRMK 1079
S V+ D+ + + RLPW E D +K S +LAE+ IPE +LKRLRN ALRM
Sbjct: 190 SKVEAHVDKGITYANESVRLPW--EGDKLRK---SNAELAEKLIPEAQLKRLRNAALRMV 244
Query: 1080 ERLKVGAAGVTQALVDTIHEKWKIDEVVKLKFEGPSMLNMKRIHDVLESKTGGLVIWRSG 1259
ER+KVG+ GVTQ LVD+I +KWK+DE+VKL+FEG NMKR HD+LE +TGGLVIWRSG
Sbjct: 245 ERIKVGSGGVTQELVDSIQKKWKVDEIVKLRFEGAPSHNMKRTHDILEHRTGGLVIWRSG 304
Query: 1260 SSVVLFRGLTYNLDCVRTFMEEKKVNLDFSPHPKNHVYDSLKLR-------------KTL 1400
SS+VL+RG++Y L CV++F K +++ S +P N SL ++ L
Sbjct: 305 SSIVLYRGISYKLPCVQSFTS-KNHDVNESEYPNNDSCQSLGVKCLNEAVERPRNGSTDL 363
Query: 1401 XXXXXXXXXXXDKMLDELGPRYVDWSGXXXXXXXXXXXXXXXXGYKTPFRRCPYGVRLRL 1580
+ +LDE+GPR+ DWSG GY+ PFRR PYG +L L
Sbjct: 364 SGEEIVDLSELNMILDEVGPRFKDWSGRGPMPVDADLLPAVVPGYRPPFRRLPYGAKLNL 423
Query: 1581 RDEETTQFRRTARITHPHFALGRSRELQGLAAAMVKLWETSAIAKIVIKRGVLNTNNERM 1760
+++E T RRTARI PHFALGR+R+LQGLAAAMVKLW SAIAKI IKRGVLNT+NERM
Sbjct: 424 KNKEMTYLRRTARIMPPHFALGRNRQLQGLAAAMVKLWRRSAIAKIAIKRGVLNTSNERM 483
Query: 1761 AEELKRLTGGTLLSRNKEYIVFYRGNDFLPPKVAESLKERE-KMTMLQYQEEEARRNASA 1937
AEELK LTGGTLLSRNK+YIVFYRGNDFL P+V E+L+E E K LQ QEE+AR+ A+
Sbjct: 484 AEELKVLTGGTLLSRNKDYIVFYRGNDFLSPRVTEALEEAERKSDFLQDQEEQARQRAAT 543
Query: 1938 MINSSYKLHKVPMVAGTLAETIAATSQWGKQPSNEDVKKMMQDSALVRRASLVKYXXXXX 2117
I+S + K P+VAGTL+ET+AATS+WG QPS E+ +KM++D+A+ R ASLVKY
Sbjct: 544 SIDSDTRAPKRPLVAGTLSETMAATSRWGNQPSIEEREKMLRDAAVARHASLVKYLDEKL 603
Query: 2118 XXXXXXXXXXXXXXXXVQGYXXXXXXXXXXXXXXXXXRLIFRKMGLSMKPFLLVGRRDVF 2297
+Q R +FRKMGLSMKPFLL+GRRDVF
Sbjct: 604 ALAKGKVKKAENMLRKLQENREPSELPTDLEILSAEERFLFRKMGLSMKPFLLLGRRDVF 663
Query: 2298 DGTIENVHLHWKFRELVKVIVKGKNFKQVKQVAINLEAESGGVLVSIDRTTKGYAIIIYR 2477
DGTIEN+HLHWK+RELVK+I + +N Q+K +AI LEAESGG+LVSID+TT+GYAII+YR
Sbjct: 664 DGTIENIHLHWKYRELVKIIAERRNAAQIKHIAITLEAESGGLLVSIDKTTQGYAIILYR 723
Query: 2478 GKNYRQPIQLRARNLLTKRQALARSIELQRREGLKHHISSLQEQMELLKSXXXXXXXXXX 2657
GKNY++P + R +NLLTKRQALARSIELQRRE LKHHI+ LQ++++ LKS
Sbjct: 724 GKNYQRPNEFRPKNLLTKRQALARSIELQRREALKHHITELQDKIQNLKSELEDTEMVEE 783
Query: 2658 XXXXTFYEKLDNS 2696
T + +LD S
Sbjct: 784 IDEETLFSRLDAS 796
>gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
notabilis]
Length = 859
Score = 609 bits (1570), Expect = e-171
Identities = 346/698 (49%), Positives = 449/698 (64%), Gaps = 36/698 (5%)
Frame = +3
Query: 642 EKNSVFDIEQEDSKVTSYGTKYDVDNANWKNN--------VAKVSVLEHSEVTLSSNKYD 797
E+ + D+++ S S+G K V +A W + V++ LE S+ ++D
Sbjct: 120 ERETEIDVKESASDSVSFGGKNGVVSAPWAHGTKPFKPHVVSEPETLEKSDNGDFQREFD 179
Query: 798 VDNAHLKDNIAVIKVQEDSEVTLSSSEYDTASGNSDVDKARDEKLADGKNTDRLPWISEN 977
V +D I+ +E+SE+ S+ DV+++ D K D LPW
Sbjct: 180 VG----RDEIS----EEESEI---SNNVMNGFSLDDVEESSDYKSND------LPWKKAG 222
Query: 978 DSEKKEV-------RSKMKLAEERIPEHELKRLRNVALRMKERLKVGAAGVTQALVDTIH 1136
+E +E RS +AE+ +PEHELKRLRNV+LRM ER KVGA G+TQALVD+IH
Sbjct: 223 KAESREGEKAAAKRRSNTAMAEKTLPEHELKRLRNVSLRMLERRKVGARGITQALVDSIH 282
Query: 1137 EKWKIDEVVKLKFEGPSMLNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLTYNLDCVRTF 1316
EKWK+DEVVKLKFE P LNM+R H++LESKTGGLVIWRSGSSVVL+RG+TYNL CV+++
Sbjct: 283 EKWKLDEVVKLKFEEPLSLNMRRTHEILESKTGGLVIWRSGSSVVLYRGMTYNLLCVQSY 342
Query: 1317 MEEKKVNLDFSPHPKNHVYD--------------------SLKLRKTLXXXXXXXXXXXD 1436
+E + + P ++ D S+K K L +
Sbjct: 343 TKENQSDSMKLPALEDGKSDIVHDKQVKVSIRTMESSTPISVKKVKGLSEGETMQLNDLN 402
Query: 1437 KMLDELGPRYVDWSGXXXXXXXXXXXXXXXXGYKTPFRRCPYGVRLRLRDEETTQFRRTA 1616
++LDELGPR+ DW G Y+TPFR PYGV+ + ++E T+ RRTA
Sbjct: 403 QLLDELGPRFTDWLGREPLPVDADLLPPVVPDYRTPFRILPYGVKRCVGNKEMTKLRRTA 462
Query: 1617 RITHPHFALGRSRELQGLAAAMVKLWETSAIAKIVIKRGVLNTNNERMAEELKRLTGGTL 1796
R+ PHFALGR+RELQGLA AMV+LWE SAIAKI IKRGV NT NERMAEELKRLTGGTL
Sbjct: 463 RMIPPHFALGRNRELQGLAKAMVRLWEKSAIAKIAIKRGVQNTCNERMAEELKRLTGGTL 522
Query: 1797 LSRNKEYIVFYRGNDFLPPKVAESLKEREKMTMLQYQEEE-ARRNASAMINSSYKLHKVP 1973
LSRNK++I+FYRGNDF+PP V SLKER K+ LQ EEE R+ A A I S +
Sbjct: 523 LSRNKDFIIFYRGNDFMPPVVVGSLKERRKLRDLQQDEEEKVRQMAPAFIQSKSQACINQ 582
Query: 1974 MVAGTLAETIAATSQWGKQPSNEDVKKMMQDSALVRRASLVKYXXXXXXXXXXXXXXXXX 2153
+VAGTLAET+AAT++WG Q S DV+ MM+DS L R AS++++
Sbjct: 583 LVAGTLAETMAATARWGNQQSPVDVEMMMKDSTLARHASIIRHLERKLALAKGNLTKAEK 642
Query: 2154 XXXXVQGYXXXXXXXXXXXXXXXXXRLIFRKMGLSMKPFLLVGRRDVFDGTIENVHLHWK 2333
VQ R +FRK+GLSM+PFLL+GRR ++ GTIEN+HLHWK
Sbjct: 643 ALAKVQENMDPSDLPNDLETITDEERFLFRKIGLSMEPFLLLGRRGLYSGTIENMHLHWK 702
Query: 2334 FRELVKVIVKGKNFKQVKQVAINLEAESGGVLVSIDRTTKGYAIIIYRGKNYRQPIQLRA 2513
+RELVK+IV+GK+F+ VKQ+AI+LEAESGGVLVSID+T KGYAI++YRGKNY+ P+++R
Sbjct: 703 YRELVKIIVRGKSFEHVKQIAISLEAESGGVLVSIDKTIKGYAILVYRGKNYQSPLKIRP 762
Query: 2514 RNLLTKRQALARSIELQRREGLKHHISSLQEQMELLKS 2627
+NLLT+RQALARS+ELQRRE L+HHI+ LQE++ LLKS
Sbjct: 763 QNLLTRRQALARSVELQRREALQHHIAELQERIGLLKS 800
>ref|XP_004507937.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Cicer arietinum]
Length = 768
Score = 590 bits (1520), Expect = e-165
Identities = 319/601 (53%), Positives = 402/601 (66%), Gaps = 22/601 (3%)
Frame = +3
Query: 969 SENDSEKKEVRSKMKLAEERIPEHELKRLRNVALRMKERLKVGAAGVTQALVDTIHEKWK 1148
SE+ S+ K+ RS +LAE IPEHEL+RLRN+ALRM ER VG AG+TQ LVD+IHEKW
Sbjct: 155 SESRSDLKKRRSNAELAERLIPEHELRRLRNIALRMVERFNVGVAGITQELVDSIHEKWL 214
Query: 1149 IDEVVKLKFEGPSMLNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLTYNLDCVRTFMEEK 1328
+DEVVK KF+ P NMKR H +LESKTGG+V+WRSGSS+VL+RG+TY L CV + +
Sbjct: 215 VDEVVKFKFDSPLSANMKRAHQILESKTGGIVVWRSGSSIVLYRGMTYKLPCVELYTKVN 274
Query: 1329 KVN---LDFSPHP-----------------KNHVYDSLKLRKTLXXXXXXXXXXXDKMLD 1448
+ +D S H ++ ++ + K + + +LD
Sbjct: 275 DIKENAVDHSVHVGSGSNAQVSVQEMVGPIESFNRNAAEYLKDMSEEELMELIELNHLLD 334
Query: 1449 ELGPRYVDWSGXXXXXXXXXXXXXXXXGYKTPFRRCPYGVRLRLRDEETTQFRRTARITH 1628
ELGPR+ DW+G GYKTPFR PYGV+ L ++E T RR AR T
Sbjct: 335 ELGPRFKDWTGREPLPVDADMLPALVPGYKTPFRLLPYGVKPCLSNKEMTVIRRIARRTA 394
Query: 1629 PHFALGRSRELQGLAAAMVKLWETSAIAKIVIKRGVLNTNNERMAEELKRLTGGTLLSRN 1808
PHFALGR+RELQGLA A+VKLWETSAIAKI IKRGV T N+RMAEELK+LTGGTL+SRN
Sbjct: 395 PHFALGRNRELQGLARAIVKLWETSAIAKIAIKRGVPYTCNDRMAEELKKLTGGTLVSRN 454
Query: 1809 KEYIVFYRGNDFLPPKVAESLKEREKMTMLQYQEEE-ARRNASAMINSSYKLHKVPMVAG 1985
KEYIVFYRGNDFLPP V +L ER+K+T+LQ EEE AR+NA ++ S+ K ++P++AG
Sbjct: 455 KEYIVFYRGNDFLPPTVTNTLTERQKLTVLQQDEEEKARQNALSITISNRKSSQMPLLAG 514
Query: 1986 TLAETIAATSQWGKQPSNEDVKKMMQDSALVRRASLVKYXXXXXXXXXXXXXXXXXXXXX 2165
TLAET AAT+ WG QPS ++ +KMM++S L R +SL++
Sbjct: 515 TLAETRAATTNWGHQPSKQEAEKMMRESTLDRLSSLIRNHEKKLALAKARFKKAEKDLAK 574
Query: 2166 VQGYXXXXXXXXXXXXXXXXXRLIFRKMGLSMKPFLLVGRRDVFDGTIENVHLHWKFREL 2345
+QG R +FRK+GLSMKP+LL+GRRDV+ GTIEN+HLHWK+RE+
Sbjct: 575 IQGDLDPADLPSDLETLTNEERFLFRKIGLSMKPYLLLGRRDVYAGTIENMHLHWKYREV 634
Query: 2346 VKVIVKGKNFKQVKQVAINLEAESGGVLVSIDRTTKGYAIIIYRGKNYRQPIQLRARNLL 2525
VK+IVKGKN QVK +AI+LEAESGGVLVS+D+ TKGY II+YRGKNY +P R ++LL
Sbjct: 635 VKIIVKGKNLAQVKHIAISLEAESGGVLVSVDKDTKGYIIILYRGKNYFRPQVTRPKSLL 694
Query: 2526 TKRQALARSIELQRREGLKHHISSLQEQMELLKS-XXXXXXXXXXXXXXTFYEKLDNSIL 2702
T+RQALARSIELQRRE LK+HIS LQE +ELLKS T Y L N+++
Sbjct: 695 TRRQALARSIELQRREALKYHISDLQEMIELLKSELEDKKNEKVNDGDKTMYSTLANTLV 754
Query: 2703 S 2705
S
Sbjct: 755 S 755
>ref|XP_004956664.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Setaria italica]
Length = 963
Score = 580 bits (1496), Expect = e-162
Identities = 364/901 (40%), Positives = 496/901 (55%), Gaps = 32/901 (3%)
Frame = +3
Query: 183 KKKRKP-KPSFYDQIRGKWSAKPISITKKFPWXXXXXXXXXXXXXXXXXXXAVEIQEEKD 359
KKKR+P KPSF +Q +WSA+ S PW Q+ D
Sbjct: 67 KKKRRPLKPSFEEQALRRWSARAPSQRASVPWEQPQQQSPSPPHRAGRESVGSGGQKTTD 126
Query: 360 SNSGISNFGVKSPNLSDKLIDGTKIEEPIFGF--DRNLSNTVSLPDNSALDNGLCSSFVE 533
S + ++ + G+ ++ G ++ N ++ +A D S F
Sbjct: 127 GGSSKT-----LRSIVEYFAGGSSGDDGEGGEREEKGAGNAAAVRAEAARDQEDGSHF-R 180
Query: 534 EEKLTETKLVSTSRNHNGSKKVYNVVDKLVAYKSNVEKNSVFDIEQEDSKVTSYGTKYDV 713
L K VS H V VA E+ D +D + G ++
Sbjct: 181 PSYLLGNKPVSAPWMHGEESSNDQWVSSSVA---EGEEGVDMDDISDDELGLAEGDDEEL 237
Query: 714 DNA-NWKNNVAKVSVLEHSEVTLSSNKYDVDNAHLK-DNI-----AVIKVQEDSEVTLSS 872
D+A + N ++ + E V ++++ Y VD + N+ ++ + +S V
Sbjct: 238 DSAEDLLNGSSEEELYEDYAVQIANSSYGVDLVVDRGSNVGGFDRSMRRSSVNSIVKTLR 297
Query: 873 SEYDTASGNSDVDKARDEKLADGKNTDRLPWISENDSE------KKEVRSKMKLAEERIP 1034
S + +S N ++++ E LPW E + + K RS +LAE IP
Sbjct: 298 SSMEESSPNVTIERSNAEDFVQKLGPVLLPWEREEEDDEVFGGGKAGRRSNTELAERTIP 357
Query: 1035 EHELKRLRNVALRMKERLKVGAAGVTQALVDTIHEKWKIDEVVKLKFEGPSMLNMKRIHD 1214
E+EL+RLR+ ALRMKER+KVG+ GVTQ +V++IH KWK+DEVVK++FEGP LNMKR HD
Sbjct: 358 ENELRRLRDAALRMKERIKVGSGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKRTHD 417
Query: 1215 VLESKTGGLVIWRSGSSVVLFRGLTYNLDCVRTFMEEKKVNLDFSPHPKNH-VYDSLKLR 1391
+LE +TGG+VIWRSG SVVL+RG+ YNL CV+++ + +++ D N ++ L+
Sbjct: 418 LLEDRTGGIVIWRSGRSVVLYRGMNYNLQCVQSYAKSTQIDSDKEVADANSAIHGRHNLQ 477
Query: 1392 KTLXXXXXXXXXXX--------------DKMLDELGPRYVDWSGXXXXXXXXXXXXXXXX 1529
K+ D LD+LGPRY DWSG
Sbjct: 478 KSRADGVKHSTSSGNFSLELEATEAFDIDSFLDQLGPRYKDWSGRSPIPVDADLLPGVVP 537
Query: 1530 GYKTPFRRCPYGVRLRLRDEETTQFRRTARITHPHFALGRSRELQGLAAAMVKLWETSAI 1709
GYK P+R PY ++ LRD+E T RR AR T PHFALGR+RE QGLAAAMVKLWE SAI
Sbjct: 538 GYKQPYRVLPYKIKSTLRDKEMTALRRLARQTAPHFALGRNREHQGLAAAMVKLWEKSAI 597
Query: 1710 AKIVIKRGVLNTNNERMAEELKRLTGGTLLSRNKEYIVFYRGNDFLPPKVAESLKEREKM 1889
AKI IKRGV NT N+RMAEE+K+LTGG LLSRNKEYI+FYRGNDF+ PKV + L E+++
Sbjct: 598 AKIAIKRGVPNTCNDRMAEEIKKLTGGVLLSRNKEYIIFYRGNDFIAPKVRQVLVEKQEQ 657
Query: 1890 TMLQYQEEE-ARRNASAMINSSYKLHKVPMVAGTLAETIAATSQWGKQPSNEDVKKMMQD 2066
+ Q EEE AR ASA I + K P+VAGTLAET A S+WG +++ ++ M+
Sbjct: 658 AITQLDEEELARLKASASITTIPNELKGPLVAGTLAETTEAKSRWGHSLNDKQREEEMKY 717
Query: 2067 SALVRRASLVKYXXXXXXXXXXXXXXXXXXXXXVQGYXXXXXXXXXXXXXXXXXRLIFRK 2246
AL++ ASL+K VQ + R +FR+
Sbjct: 718 LALMKHASLLKSLKRKLILAKTKIAKAERALAKVQQFLSPAELPTDLETVTDEERFLFRR 777
Query: 2247 MGLSMKPFLLVGRRDVFDGTIENVHLHWKFRELVKVIVKGKNFKQVKQVAINLEAESGGV 2426
+GL M+ FL++GRRDVFDGT++N+HLHWK REL+K+IV+GK+F QVK +AI+LEAES GV
Sbjct: 778 IGLKMRAFLMLGRRDVFDGTVQNMHLHWKHRELIKIIVRGKSFAQVKHIAISLEAESEGV 837
Query: 2427 LVSIDRTTKGYAIIIYRGKNYRQPIQLRARNLLTKRQALARSIELQRREGLKHHISSLQE 2606
L+S+D+TTKGYAII YRGKNYR+P ++ RNLLT+RQALARSIELQRRE LKHHISSLQ
Sbjct: 838 LISVDKTTKGYAIIFYRGKNYRRPQIVKPRNLLTRRQALARSIELQRREALKHHISSLQG 897
Query: 2607 QMELLKSXXXXXXXXXXXXXXTFYEKLDNSILSXXXXXXXXXXXAYLQTYESGDENGAFI 2786
++ L + + ++ + S AYLQTY S +E A
Sbjct: 898 KIWKLNTQLVQMKEAMEKEDVKLLQTVEADLSSDDDDVEDEGEEAYLQTYSSDEEEDANS 957
Query: 2787 D 2789
D
Sbjct: 958 D 958
>ref|XP_006412812.1| hypothetical protein EUTSA_v10024391mg [Eutrema salsugineum]
gi|557113982|gb|ESQ54265.1| hypothetical protein
EUTSA_v10024391mg [Eutrema salsugineum]
Length = 848
Score = 579 bits (1493), Expect = e-162
Identities = 317/610 (51%), Positives = 408/610 (66%), Gaps = 17/610 (2%)
Frame = +3
Query: 849 DSEVTLSSSEYDTASGNSDVD----KARDEKLADGKNTDRLPWISENDSEK--KEVRSKM 1010
D+ T+ D GN VD +ARD +L D + + I + ++ RS
Sbjct: 185 DNGFTVDRYRRDNDFGNRAVDYNTREARDSELDDDGHRGQRGMIDSGKDKGIWRKKRSNT 244
Query: 1011 KLAEERIPEHELKRLRNVALRMKERLKVGAAGVTQALVDTIHEKWKIDEVVKLKFEGPSM 1190
AE +PEHEL+RLRNVALRM ER KVG+AG+TQALV+ IHEKW++DEVVKLKF P
Sbjct: 245 IEAEGTVPEHELQRLRNVALRMVERFKVGSAGITQALVEAIHEKWEVDEVVKLKFREPCS 304
Query: 1191 LNMKRIHDVLESKTGGLVIWRSGSSVVLFRGLTYNLDCVRTFMEEKKVNLDFSPH----- 1355
LNMKR H++LE KTGGLVIWRSGSS+VL+RG++Y L CV++F+++ NLD SP
Sbjct: 305 LNMKRTHEILEKKTGGLVIWRSGSSLVLYRGISYKLKCVQSFIKQN--NLDTSPEIRRSV 362
Query: 1356 --PKNHVYDSLKLRKTLXXXXXXXXXXXDKMLDELGPRYVDWSGXXXXXXXXXXXXXXXX 1529
++++ + K + + +LDELGPR+ DW+G
Sbjct: 363 DTRRDYIPEDANYPKNVPKEQLSELCELNDLLDELGPRFHDWTGCAPLPVDADMLPPMVL 422
Query: 1530 GYKTPFRRCPYGVRLRLRDEETTQFRRTARITHPHFALGRSRELQGLAAAMVKLWETSAI 1709
GY+ PFR P GV+ L + E T+ RR ARI+ PHFALGRSRELQGLA AMVKLW SAI
Sbjct: 423 GYRCPFRILPQGVKPVLSNTEMTEMRRLARISPPHFALGRSRELQGLAVAMVKLWAKSAI 482
Query: 1710 AKIVIKRGVLNTNNERMAEELKRLTGGTLLSRNKEYIVFYRGNDFLPPKVAESLKEREK- 1886
AKI IKRGV NT NERMAEELKRLT G L+SRNKEYIVFYRGNDF+PP VAE+L ER+K
Sbjct: 483 AKIAIKRGVENTRNERMAEELKRLTRGVLVSRNKEYIVFYRGNDFMPPAVAEALTERQKE 542
Query: 1887 -MTMLQYQEEEARRNASAMIN--SSYKLHKVPMVAGTLAETIAATSQWGKQPSNEDVKKM 2057
+LQ +E++ R AS + S K K ++AGTLAETIAA+S+W + S+ D++++
Sbjct: 543 ITEVLQTKEDQVREMASTRVTHTSQGKSPKTQLLAGTLAETIAASSRWAPEASSVDIEEL 602
Query: 2058 MQDSALVRRASLVKYXXXXXXXXXXXXXXXXXXXXXVQGYXXXXXXXXXXXXXXXXXRLI 2237
++SA ++RA+L++ VQ RL+
Sbjct: 603 KRESASIKRAALIRNLNVRLVHAKQKLRRAERALAKVQKDLDPSELPTDSEIITEEERLL 662
Query: 2238 FRKMGLSMKPFLLVGRRDVFDGTIENVHLHWKFRELVKVIVKGKNFKQVKQVAINLEAES 2417
FRK+GLSM PFLLVGRR+V+DGTIEN+HLHWK RELVK+IV+GK+ QVK +AI+LEAES
Sbjct: 663 FRKIGLSMDPFLLVGRREVYDGTIENMHLHWKHRELVKIIVRGKSLPQVKHIAISLEAES 722
Query: 2418 GGVLVSIDRTTKGYAIIIYRGKNYRQPIQLRARNLLTKRQALARSIELQRREGLKHHISS 2597
GVLVS+D+T KGYAII+YRGKNY+ P +LR NLLT+R+A ARSIELQRRE LKHH++
Sbjct: 723 RGVLVSVDKTMKGYAIILYRGKNYQMPFRLRPSNLLTRRKAFARSIELQRREALKHHVAD 782
Query: 2598 LQEQMELLKS 2627
L+E++ELLK+
Sbjct: 783 LEERIELLKT 792