BLASTX nr result

ID: Achyranthes22_contig00010581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00010581
         (384 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus ...    59   5e-07
gb|EOY15605.1| RNA-binding KH domain-containing protein, putativ...    57   2e-06
gb|EOY15604.1| RNA-binding KH domain-containing protein, putativ...    57   2e-06
gb|EOY15603.1| RNA-binding KH domain-containing protein, putativ...    57   2e-06
gb|EOY15601.1| RNA-binding KH domain-containing protein, putativ...    57   2e-06
emb|CBI19333.3| unnamed protein product [Vitis vinifera]               56   6e-06
ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g...    56   6e-06
emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]    56   6e-06

>ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 679

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
 Frame = -2

Query: 179 MSLSLTPAKRQHSRNHEDSNGK-KFQKSARQPKNTSPRVVFRVLCPSSRIESVIEKGNII 3
           MS +LTPAKR H RNH ++NGK K QK+   P      VVFR+LCP+S+   +I KG  I
Sbjct: 1   MSTALTPAKRPHDRNHTETNGKSKLQKTVNSPVR---GVVFRILCPASKTGGIIGKGGAI 57


>gb|EOY15605.1| RNA-binding KH domain-containing protein, putative isoform 5
           [Theobroma cacao]
          Length = 572

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = -2

Query: 179 MSLSLTPAKRQHSRNHEDSNGKKFQKSARQPKNTSPRVVFRVLCPSSRIESVIEKGNII 3
           MS  LTP+KR H RN  ++NGK+  + + Q K     +VFRVLCP+S+  SVI KG  I
Sbjct: 1   MSTPLTPSKRPHDRNPSETNGKRKLQKSGQSKILPGGIVFRVLCPASKTGSVIGKGGTI 59


>gb|EOY15604.1| RNA-binding KH domain-containing protein, putative isoform 4
           [Theobroma cacao]
          Length = 590

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = -2

Query: 179 MSLSLTPAKRQHSRNHEDSNGKKFQKSARQPKNTSPRVVFRVLCPSSRIESVIEKGNII 3
           MS  LTP+KR H RN  ++NGK+  + + Q K     +VFRVLCP+S+  SVI KG  I
Sbjct: 1   MSTPLTPSKRPHDRNPSETNGKRKLQKSGQSKILPGGIVFRVLCPASKTGSVIGKGGTI 59


>gb|EOY15603.1| RNA-binding KH domain-containing protein, putative isoform 3
           [Theobroma cacao]
          Length = 662

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = -2

Query: 179 MSLSLTPAKRQHSRNHEDSNGKKFQKSARQPKNTSPRVVFRVLCPSSRIESVIEKGNII 3
           MS  LTP+KR H RN  ++NGK+  + + Q K     +VFRVLCP+S+  SVI KG  I
Sbjct: 1   MSTPLTPSKRPHDRNPSETNGKRKLQKSGQSKILPGGIVFRVLCPASKTGSVIGKGGTI 59


>gb|EOY15601.1| RNA-binding KH domain-containing protein, putative isoform 1
           [Theobroma cacao] gi|508723705|gb|EOY15602.1|
           RNA-binding KH domain-containing protein, putative
           isoform 1 [Theobroma cacao]
          Length = 674

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = -2

Query: 179 MSLSLTPAKRQHSRNHEDSNGKKFQKSARQPKNTSPRVVFRVLCPSSRIESVIEKGNII 3
           MS  LTP+KR H RN  ++NGK+  + + Q K     +VFRVLCP+S+  SVI KG  I
Sbjct: 1   MSTPLTPSKRPHDRNPSETNGKRKLQKSGQSKILPGGIVFRVLCPASKTGSVIGKGGTI 59


>emb|CBI19333.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/66 (54%), Positives = 42/66 (63%), Gaps = 7/66 (10%)
 Frame = -2

Query: 179 MSLSLTPAKRQHSRNHEDSNGK-KFQKSA-----RQPKNTSP-RVVFRVLCPSSRIESVI 21
           MS SLTP+KR + R+  DSNGK K+QKS       Q    SP  VVFRVLCP+S+  SVI
Sbjct: 1   MSFSLTPSKRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVI 60

Query: 20  EKGNII 3
            KG  I
Sbjct: 61  GKGGTI 66


>ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 701

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/66 (54%), Positives = 42/66 (63%), Gaps = 7/66 (10%)
 Frame = -2

Query: 179 MSLSLTPAKRQHSRNHEDSNGK-KFQKSA-----RQPKNTSP-RVVFRVLCPSSRIESVI 21
           MS SLTP+KR + R+  DSNGK K+QKS       Q    SP  VVFRVLCP+S+  SVI
Sbjct: 1   MSFSLTPSKRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVI 60

Query: 20  EKGNII 3
            KG  I
Sbjct: 61  GKGGTI 66


>emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
          Length = 709

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/66 (54%), Positives = 42/66 (63%), Gaps = 7/66 (10%)
 Frame = -2

Query: 179 MSLSLTPAKRQHSRNHEDSNGK-KFQKSA-----RQPKNTSP-RVVFRVLCPSSRIESVI 21
           MS SLTP+KR + R+  DSNGK K+QKS       Q    SP  VVFRVLCP+S+  SVI
Sbjct: 1   MSFSLTPSKRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVI 60

Query: 20  EKGNII 3
            KG  I
Sbjct: 61  GKGGTI 66


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