BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00009224
         (2458 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao...   676   0.0  
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...   663   0.0  
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote...   655   0.0  
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein...   653   0.0  
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein...   651   0.0  
ref|XP_002316628.2| plus-3 domain-containing family protein [Pop...   642   0.0  
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...   640   e-180
gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus...   636   e-179
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop...   635   e-179
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   634   e-179
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   632   e-178
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...   631   e-178
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein...   630   e-178
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein...   630   e-178
gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus pe...   629   e-177
ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutr...   623   e-175
ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis th...   614   e-173
gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]               614   e-173
ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp....   612   e-172
ref|XP_006300844.1| hypothetical protein CARUB_v10019938mg [Caps...   610   e-171

>gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao]
            gi|508781058|gb|EOY28314.1| PAF1 complex component
            isoform 1 [Theobroma cacao]
          Length = 660

 Score =  676 bits (1744), Expect = 0.0
 Identities = 374/663 (56%), Positives = 442/663 (66%), Gaps = 21/663 (3%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            MADLENLLLEAA          H  PPSRRRRE +Y              + GY  R  +
Sbjct: 1    MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 426  GPQVPLKKR----GKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLAQ 593
            G QVPLKKR     +D                               LYK+EDDR++LAQ
Sbjct: 61   GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120

Query: 594  LTELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSA 773
            +TELERELILSERA K  DKK  E+++S+ +N+  +P   R+ TPPL SSRGVR+SARSA
Sbjct: 121  MTELERELILSERADKRGDKKFTEKIRSKREND--RPSRSRKETPPLPSSRGVRSSARSA 178

Query: 774  DRAAHKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXXX 932
            DRAA K DALNELR KR+KQQ         DA+R  SGSRG SPVKRK            
Sbjct: 179  DRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQ 238

Query: 933  XXXXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPF 1112
                              G  M DSDD+      + PT++DIK ITIRRS+L KWFMEPF
Sbjct: 239  SDSESRSNSEDEGSTGDGG--MVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPF 296

Query: 1113 FEDLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESS 1292
            FE+LIVGC+VRVGIG      IYRLC+VRNVDA++P + YKLENK TYKYLN VWG+ESS
Sbjct: 297  FEELIVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESS 356

Query: 1293 AARWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVK 1472
            AARWQMA ISDSPP EEE+ Q  +E+ER+ GRMP+K +V EKKE ++K  TFVYSA TVK
Sbjct: 357  AARWQMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVK 416

Query: 1473 HMLQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKN 1652
             MLQEKKS ++RPLNIAAEK++LRR++E AQ ++DEA+VE+IK RL++L A RQAQ+ K+
Sbjct: 417  QMLQEKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQE-KD 475

Query: 1653 SKAHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYY-----ATG 1817
            +KA RLAEMNRKNR ENFKNAS+LKP+NT LK+GEAGYDPFSRRWT S NYY        
Sbjct: 476  AKAVRLAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGAD 535

Query: 1818 SKDKANGDASEVAENNKGGE-----KVGXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHNM 1982
            +   ANGD   V  +  G +     + G                 VDTSAPVD+GTE NM
Sbjct: 536  AAAVANGDRIGVIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNM 595

Query: 1983 LHNFELPISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYKR 2162
            LH+FE+PISLN LQ+FGGPQG +AGFMARKQRIE T+G QVPENDGRRHALTL+VSDYKR
Sbjct: 596  LHDFEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKR 655

Query: 2163 RRG 2171
            RRG
Sbjct: 656  RRG 658


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
            gi|223541691|gb|EEF43239.1| RNA polymerase-associated
            protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  663 bits (1710), Expect = 0.0
 Identities = 368/668 (55%), Positives = 436/668 (65%), Gaps = 26/668 (3%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            MADLENLLLEAA          +  PPSRRRRE +Y              +RGY  R  +
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60

Query: 426  GPQVPLKKR----GKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLAQ 593
            G QVPLKKR     +D                               LYK+EDDR++LAQ
Sbjct: 61   GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120

Query: 594  LTELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSA 773
            ++ELERE+ILSERA K  DK L ER++S  K    +    R+ TPPL SSRGVRTSARSA
Sbjct: 121  MSELEREMILSERADKKGDKNLTERIRS--KRESERTTRSRKETPPLPSSRGVRTSARSA 178

Query: 774  DRAAHKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXXX 932
            DRAA K DALNEL+ +R+KQQ         DA+R GSGSRG+SP+KRK            
Sbjct: 179  DRAAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSSS 238

Query: 933  XXXXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPF 1112
                                 M DSDD+  +P S  PT++DI+ ITIRRS+L KWFMEP+
Sbjct: 239  ESESRSHSEDEGSTGDGG---MADSDDD-GEPGSQGPTFDDIREITIRRSKLAKWFMEPW 294

Query: 1113 FEDLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESS 1292
            FE+LIVGCFVRVGIG      IYRLC+VRNVDA+DP++ YKLENK TYKYLN +WG+ESS
Sbjct: 295  FEELIVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESS 354

Query: 1293 AARWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVK 1472
            AARWQMA ISDS P E+EY QW +EVER+ GRMPTK ++ EKKE I K+NTFVYSA TVK
Sbjct: 355  AARWQMAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVK 414

Query: 1473 HMLQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKN 1652
             MLQEKKSA++RPLN+AAEK++LRRE+E AQ + D+A+VE+I+AR++EL A RQ Q  K+
Sbjct: 415  QMLQEKKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQ-GKD 473

Query: 1653 SKAHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKDKA 1832
            +KA RLAEMNRKNR ENF+NAS+LKP+NT+LK+GEAGYDPFSRRWT S NYY +     A
Sbjct: 474  AKAIRLAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVS---KPA 530

Query: 1833 NGDASEVAENNKGG---------------EKVGXXXXXXXXXXXXXXXXXVDTSAPVDQG 1967
             GDA+    N   G                + G                 VDT+APVDQG
Sbjct: 531  GGDAAAATNNEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQG 590

Query: 1968 TEHNMLHNFELPISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSV 2147
            TE N LHNFELPISL  LQKFGG QG  AGFMARKQRIE TIG +V END +RH LTL+V
Sbjct: 591  TESNTLHNFELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTV 650

Query: 2148 SDYKRRRG 2171
            SDYKRRRG
Sbjct: 651  SDYKRRRG 658


>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus notabilis]
          Length = 658

 Score =  655 bits (1690), Expect = 0.0
 Identities = 362/662 (54%), Positives = 436/662 (65%), Gaps = 20/662 (3%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            MA+LENLLLEAA          H  PPSRRRRE +Y              +RGY  R  +
Sbjct: 1    MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60

Query: 426  GPQVPLKKRGKDSH-DQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLAQLTE 602
            G QVPLKKR   +  D                            LYKD+DDR++LA++TE
Sbjct: 61   GSQVPLKKRLDPTEMDDDQGSEEEGDDDRGSDREGDSESDVGSDLYKDDDDRRKLAEMTE 120

Query: 603  LERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSADRA 782
            L+RE+IL +RA K +DK L E+++ +W N     Q ++E+  PL SSR VR+SARSADRA
Sbjct: 121  LQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKET--PLPSSR-VRSSARSADRA 177

Query: 783  AHKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXXXXXX 941
            A K DALNELR KR+KQQ         DA+R GSGSR     KRK               
Sbjct: 178  AAKDDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSDS 237

Query: 942  XXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPFFED 1121
                           G  M DSDDE   P S   T++DIK +T+RRS+L KW MEPFFE+
Sbjct: 238  ESESQSEDEGSTGDGG--MIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEE 295

Query: 1122 LIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESSAAR 1301
            LIVGCFVRVGIG      IYRLC+VRNVDAS+P++QYKL+NK+T+KYLN VWG+E+SAAR
Sbjct: 296  LIVGCFVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAAR 355

Query: 1302 WQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVKHML 1481
            WQMA +SDS P EEE+ QW +EVER+ GRMPTKH++ +KKE I+K NTFVYSA TVK ML
Sbjct: 356  WQMAMVSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQML 415

Query: 1482 QEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKNSKA 1661
            QEKKSA+ RPLNIA EK++LRRE+E AQ +NDE +V++IK RL+EL A R+A+   ++KA
Sbjct: 416  QEKKSASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQT-DAKA 474

Query: 1662 HRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYA---------T 1814
             RLAEMNRKNRVENFKNAS+LKP+NT LK+GEAGYDPFSRRWT S NYY          +
Sbjct: 475  IRLAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDS 534

Query: 1815 GSKDKANGDASEVAENNKGG---EKVGXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHNML 1985
            G+    NG +++   N + G    + G                 VDT+APVDQGT  NML
Sbjct: 535  GANAGNNGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNML 594

Query: 1986 HNFELPISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYKRR 2165
            HNFELPISL+ LQKFGGPQG  AGFMARKQRIE T+G +VPENDGRRHALTLSV DYKRR
Sbjct: 595  HNFELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRR 654

Query: 2166 RG 2171
            RG
Sbjct: 655  RG 656


>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
            [Solanum lycopersicum] gi|460374083|ref|XP_004232841.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform 2 [Solanum lycopersicum]
          Length = 645

 Score =  653 bits (1684), Expect = 0.0
 Identities = 357/652 (54%), Positives = 435/652 (66%), Gaps = 12/652 (1%)
 Frame = +3

Query: 252  DLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSNGP 431
            +L +LLLEAA           P   S+R  + +Y               RGY GR  +G 
Sbjct: 4    ELTDLLLEAAGRTNTGGRN-RPPHSSKRHHKSSYSDDGSDSRDDDSDDGRGYSGRKLSGS 62

Query: 432  QVPLKKRGKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLAQLTELER 611
            QVPLKKR                                  LYKD+DDRQ+LAQ+TELER
Sbjct: 63   QVPLKKRLDPQERDDDHSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLAQMTELER 122

Query: 612  ELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSADRAAHK 791
            E+IL++RA K  D+ LH+++         + QP+++S+PP + SRG+R+S R+ DRAA +
Sbjct: 123  EMILTDRAAKKSDRSLHDKMIK------DRAQPRKQSSPP-SHSRGMRSSTRALDRAADR 175

Query: 792  ADALNELRLKRMKQQG--------LDAARHGSGSRGYSPVKRKXXXXXXXXXXXXXXXXX 947
             DALNE+R KR +QQ          DAAR GSGSRGYSP+KR+                 
Sbjct: 176  DDALNEIRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGESD 235

Query: 948  XXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPFFEDLI 1127
                            MDDSDD+ S P+S +PT+EDIK I+IRRS+L KWFMEPFF++LI
Sbjct: 236  SHSNEGDSSADDG---MDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELI 292

Query: 1128 VGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESSAARWQ 1307
            VGCFVRVGIG      IYRLC+VRNVDASDPN+QYKLENK T K+LN VWG+E+SAARWQ
Sbjct: 293  VGCFVRVGIGRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQ 352

Query: 1308 MARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVKHMLQE 1487
            MA ISDSPPL +E++QW +EVER+ GRMP+K +V EKKE I+K+NTFVYSA+TVK MLQ+
Sbjct: 353  MAMISDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQ 412

Query: 1488 KKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKNSKAHR 1667
            KKSA  RPLN+AAEK++LRR+ME A+ +NDEA+VE+IKARL+EL   R+ Q+ K+ KA R
Sbjct: 413  KKSATWRPLNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELEDSRKVQE-KDDKARR 471

Query: 1668 LAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATG-SKDKANGDA 1844
            LAEMNRKNRVENFKNAS+L+P+N  LK+GEAGYDPFSRRWT STNY+A G S  +A   A
Sbjct: 472  LAEMNRKNRVENFKNASELRPVNQLLKAGEAGYDPFSRRWTRSTNYFAKGASNGEAAAAA 531

Query: 1845 SEVAENNKGGEKV---GXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHNMLHNFELPISLN 2015
            +  AE+N G       G                 VDT+APVDQGTE N LH+F+LPISL 
Sbjct: 532  ALAAEDNNGAGGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLA 591

Query: 2016 TLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYKRRRG 2171
             LQKFGG QG  AGFMARKQRIE T+G  VPENDGRRHALTLSVSDYKRRRG
Sbjct: 592  VLQKFGGSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRG 643


>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
            tuberosum]
          Length = 652

 Score =  651 bits (1679), Expect = 0.0
 Identities = 354/659 (53%), Positives = 436/659 (66%), Gaps = 19/659 (2%)
 Frame = +3

Query: 252  DLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSNGP 431
            +L +LLLEAA           P   SRR  + +Y               RGY GR  +G 
Sbjct: 4    ELTDLLLEAAGRTNTGGRN-RPPQSSRRHHKSSYSDDGSDSRDDDSDDGRGYSGRKLSGS 62

Query: 432  QVPLKKRGKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLAQLTELER 611
            QVPLKKR                                  LYKD+DDRQ+LAQ+TELER
Sbjct: 63   QVPLKKRLDPQERDDDHSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLAQMTELER 122

Query: 612  ELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSADRAAHK 791
            E+IL++RA K  D+ LH+++         + QP+++S+PP + SRG+R+S R+ DRAA +
Sbjct: 123  EMILTDRAAKKSDRSLHDKMIK------DRAQPRKQSSPP-SHSRGMRSSTRALDRAADR 175

Query: 792  ADALNELRLKRMKQQG--------LDAARHGSGSRGYSPVKRKXXXXXXXXXXXXXXXXX 947
             DALNE+R KR +QQ          DAAR GSG RGYSP+KR+                 
Sbjct: 176  DDALNEIRAKRARQQQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRGESD 235

Query: 948  XXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPFFEDLI 1127
                            MDDSDD+ S P+S +PT+EDIK I+IRRS+L KWFMEPFF++LI
Sbjct: 236  SHSNEGDSSADDG---MDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELI 292

Query: 1128 VGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESSAARWQ 1307
            VGCFVRVGIG      IYRLC+VRNVD+SDPN+QYKLENK T K+LN VWG+E+SAARWQ
Sbjct: 293  VGCFVRVGIGRSRSGPIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQ 352

Query: 1308 MARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVKHMLQE 1487
            MA +SDSPPL +E++QW +EVER+ GRMP+K +V EKKE I+K+NTFVYSA+TVK MLQ+
Sbjct: 353  MAMVSDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQ 412

Query: 1488 KKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKNSKAHR 1667
            KKSA  RPLN+AAEK++LRR+ME A+ +NDEA+VE+IKARL+EL   R+ Q+ K+ KA R
Sbjct: 413  KKSATWRPLNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELDDSRKVQE-KDDKARR 471

Query: 1668 LAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKDKANG--- 1838
            LAEMNRKNRVENFKNAS+L+P+N  LK+G+AGYDPFSRRWT STNY+A G+ ++A G   
Sbjct: 472  LAEMNRKNRVENFKNASELRPVNQLLKAGQAGYDPFSRRWTRSTNYFAKGANEEAEGASN 531

Query: 1839 -----DASEVAENNKGGEKV---GXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHNMLHNF 1994
                  A+  AE+N G       G                 VDT+APVDQGTE N LH+F
Sbjct: 532  GEVAAAAALAAEDNNGASGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDF 591

Query: 1995 ELPISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYKRRRG 2171
            +LPISL  LQKFGG QG  AGFMARKQRIE T+G  VPENDGRRHALTLSVSDYKRRRG
Sbjct: 592  DLPISLAVLQKFGGSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRG 650


>ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|550327599|gb|EEE97240.2| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 664

 Score =  642 bits (1656), Expect = 0.0
 Identities = 361/670 (53%), Positives = 434/670 (64%), Gaps = 28/670 (4%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRRED-AYXXXXXXXXXXXXXXNRGYGGRNS 422
            MADLENLLLEAA          +  PPSRRR+++ +Y              +RGY  R  
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSLPPSRRRKQEGSYSDGGSDSRDDGSDDDRGYASRKP 60

Query: 423  NGPQVPLKKR----GKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLA 590
            +G QVPLKKR     +D                               LYKDEDDRQ+LA
Sbjct: 61   SGSQVPLKKRLETNERDDEGGSQEEGDYDDGGSDREGESSDGSDIGDDLYKDEDDRQKLA 120

Query: 591  QLTELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARS 770
            Q++EL+RELIL++RA K  DK L E+++S  K ++ KP   R+ TPPL SSRGVR+SARS
Sbjct: 121  QMSELDRELILADRADKKGDKHLTEKIRS--KRDNDKPTRSRKETPPLPSSRGVRSSARS 178

Query: 771  ADRAAHKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXX 929
            ADRAA K DALNELR KR+KQQ         DA+R  +GSRG++ VK+            
Sbjct: 179  ADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSAGSRGFAQVKKNNFTSARLSSSS 238

Query: 930  XXXXXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEP 1109
                               G   D   DE   P S  PTYEDIK ITIRR++L KWFMEP
Sbjct: 239  SESESGSRSHSEDEGSTGDGGMAD--SDEDGDPGSRGPTYEDIKEITIRRTKLAKWFMEP 296

Query: 1110 FFEDLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSES 1289
            +FE+LI+GCFVRVGIG      +YRLC+VRNVDA++P+K YKLENK TYKYLN  WG++S
Sbjct: 297  WFEELIIGCFVRVGIGRSKTGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADS 356

Query: 1290 SAARWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETV 1469
            SAARWQMA +SDS P EEEY QW +E ER  GR+P+K ++ EKKE I K+NTFVYSA TV
Sbjct: 357  SAARWQMAMVSDSAPTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKSNTFVYSAATV 416

Query: 1470 KHMLQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNK 1649
            K MLQEKKSA++RPLN+AAEK++LRRE+E AQ R+DEA+VE+I+AR+ EL A RQA+  K
Sbjct: 417  KQMLQEKKSASSRPLNVAAEKDRLRRELEIAQSRHDEAEVERIEARILELEASRQAK-VK 475

Query: 1650 NSKAHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKDK 1829
            ++KA RLAEMNRKNRVENF+NAS+LKPINT LK+GEAGYDPFSRRWT S NYY +   + 
Sbjct: 476  DAKALRLAEMNRKNRVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSRNYYVS---NP 532

Query: 1830 ANGDASEVAENNKGGE----------------KVGXXXXXXXXXXXXXXXXXVDTSAPVD 1961
            A GD +  A N++  +                + G                 VDTSAPVD
Sbjct: 533  AGGDDAVAASNSEANDTAAVADSDHVVAGAMSESGVAATAAALDAAADAGKLVDTSAPVD 592

Query: 1962 QGTEHNMLHNFELPISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTL 2141
            QGTE N +HNFEL ISL  LQKF GPQG  AGFMARKQRIE  +G QV ENDGRRHALTL
Sbjct: 593  QGTESNTMHNFELEISLIALQKFRGPQGAHAGFMARKQRIEANVGCQVRENDGRRHALTL 652

Query: 2142 SVSDYKRRRG 2171
            +V DYKRRRG
Sbjct: 653  TVGDYKRRRG 662


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis
            sativus]
          Length = 660

 Score =  640 bits (1650), Expect = e-180
 Identities = 363/667 (54%), Positives = 437/667 (65%), Gaps = 25/667 (3%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            MADLENLLLEAA          H  PPSRR+RE +Y              +RGY  R  +
Sbjct: 1    MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 426  GPQVPLKKR----GKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLAQ 593
            G QVPLKKR     +D                               LYKD+DDR++LA 
Sbjct: 61   GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 594  LTELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSA 773
            ++EL+RE+ILS+RA K +DK L+E +++  K +  K  P R+ TPPL SSR +R+SARSA
Sbjct: 121  MSELQREMILSDRASKKNDKHLYESLRA--KMDKGKSAPSRKETPPLPSSR-IRSSARSA 177

Query: 774  DRAAHKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXXX 932
            DRAA K DALNELR KR+KQQ         DA+R  + SR +SP KRK            
Sbjct: 178  DRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQ 237

Query: 933  XXXXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPF 1112
                              G  M DSDDE S P S+ PT+EDIK +TIRRS+L KW MEPF
Sbjct: 238  SESESRFQSDDEGSTGDGG--MIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPF 295

Query: 1113 FEDLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESS 1292
            FE+LIVGCFVRVGIG      IYRLC+VRNVDA++P++QYKLENK+T+KYLN +WG+E+S
Sbjct: 296  FEELIVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEAS 355

Query: 1293 AARWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVK 1472
            AARWQMA +SDS PLE+EY QW KEVERT GRM +K ++ EKKE I+K N FVYSA TVK
Sbjct: 356  AARWQMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVK 415

Query: 1473 HMLQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKN 1652
             MLQ+KKSA+ RPLNIAAEK++LRREM+ A  +NDEA+VE+IK RL++L A R+ Q  K+
Sbjct: 416  QMLQDKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQ-MKD 474

Query: 1653 SKAHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKDKA 1832
            +KA RLAEMNRKNRVENFKNAS+L+P+  +LK+GEAGYDPFSRRWT S NYY + +  +A
Sbjct: 475  AKAIRLAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNA-GEA 532

Query: 1833 NGDASEVAENNK--------------GGEKVGXXXXXXXXXXXXXXXXXVDTSAPVDQGT 1970
            NG A+E A N+               G    G                 VDT+APVD GT
Sbjct: 533  NG-AAEAAGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGT 591

Query: 1971 EHNMLHNFELPISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVS 2150
            E N LHNFELPISL  LQKFGG  G  AGF+ARKQRIE T+G QVPENDGRRHALTL+VS
Sbjct: 592  ESNSLHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVS 651

Query: 2151 DYKRRRG 2171
            DYKRRRG
Sbjct: 652  DYKRRRG 658


>gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  636 bits (1641), Expect = e-179
 Identities = 359/659 (54%), Positives = 429/659 (65%), Gaps = 17/659 (2%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            MADLENLLLEAA          H  PPSRRR + AY                 Y  R  +
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 426  GPQVPLKKR----GKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLAQ 593
            G QVPLKKR     +D                               LYKDEDDR++L++
Sbjct: 61   GSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDDLYKDEDDRRKLSE 120

Query: 594  LTELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSA 773
            +TEL+RE+ILS+RA K DDK L  ++ S  K    K    R+ +PP++SSR +R SARSA
Sbjct: 121  MTELQREMILSDRATKKDDKNLLGKIAS--KREKGKVSVPRKQSPPMSSSR-MRASARSA 177

Query: 774  DRAAHKADALNELRLKRMKQQGLDAAR------HGSGSRGYSPVKRKXXXXXXXXXXXXX 935
            DR+A K DALNELR KR+KQQ  +A R        +G R +SP KRK             
Sbjct: 178  DRSA-KNDALNELRAKRLKQQDPEAHRKLREASRNAGPRHFSPPKRKPFTSTSLSSSSHS 236

Query: 936  XXXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPFF 1115
                             G  + DSDD+ +   S  P+++DIK ITIRRS+L KWFMEPFF
Sbjct: 237  ESESRSHSDDEGSTGDGG--IGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFF 294

Query: 1116 EDLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESSA 1295
            E+LIVGCFVRVGIG      IYRLC+V+NVDAS+P++QYKLENK TYKYLN VWG+ESSA
Sbjct: 295  EELIVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSA 354

Query: 1296 ARWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVKH 1475
            ARWQMA +SDS PLEEE+ QW KEV+R+ GRMPTK +V EKK+ I+K  TFVYSA TVK 
Sbjct: 355  ARWQMAMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQ 414

Query: 1476 MLQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKNS 1655
            MLQEKKSA+TRPLN+AAEK++LRRE+E AQ ++DEA+V++IKARL+EL A R A+  K++
Sbjct: 415  MLQEKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEASRHAK-QKDA 473

Query: 1656 KAHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYY----ATGSK 1823
            KA +LAEMNRKNR ENFKNAS+LKP+NT LK+GEAGYDPFSRRWT S NYY    A    
Sbjct: 474  KALKLAEMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYTGEKAAAGN 533

Query: 1824 DKANGDASEVAENNKGG---EKVGXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHNMLHNF 1994
            +  NG  +    N+ G     + G                 VDTSAPVDQGTE NMLHNF
Sbjct: 534  NSVNGIVAGPGTNSTGAPVTAEAGLVATAAALEAAADAGKLVDTSAPVDQGTESNMLHNF 593

Query: 1995 ELPISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYKRRRG 2171
            ELPISL  LQK+GG QG  AGFMARKQRIE T+G +V ENDGRRH+LTLSVSDYKRRRG
Sbjct: 594  ELPISLALLQKYGGAQGAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKRRRG 652


>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|222848649|gb|EEE86196.1| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 662

 Score =  635 bits (1639), Expect = e-179
 Identities = 355/667 (53%), Positives = 437/667 (65%), Gaps = 25/667 (3%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRR-REDAYXXXXXXXXXXXXXXNRGYGGRNS 422
            MADLENLLLEAA          +   PSRRR RE +Y              +RGY  R  
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRGYANRKP 60

Query: 423  NGPQVPLKKR----GKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLA 590
            +G QVPLKKR     +D  +                            LYKDEDDR++LA
Sbjct: 61   SGSQVPLKKRLETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDEDDRKKLA 120

Query: 591  QLTELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARS 770
            Q++EL+RELIL++RA K  DK L E++  R K ++ KP   R+ TPPL SSRGVR+SARS
Sbjct: 121  QMSELDRELILADRADKKGDKHLTEKI--RLKRDNDKPTRSRKETPPLPSSRGVRSSARS 178

Query: 771  ADRAAHKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXX 929
            ADRAA K DALNELR KR+KQQ         D +R  +GSRG+S VK+            
Sbjct: 179  ADRAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSSSS 238

Query: 930  XXXXXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEP 1109
                                  M DSD+++ +P S  PTYEDIK ITIRR++L KWFMEP
Sbjct: 239  SESGSRSHSEDEGSTGDGG---MADSDEDV-EPGSKGPTYEDIKEITIRRTKLAKWFMEP 294

Query: 1110 FFEDLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSES 1289
            +FE+LI+GCFVRVGIG      +YRLC+VRNVDA++P+K YKLENK TYKYLN  WG+++
Sbjct: 295  WFEELIIGCFVRVGIGRSKSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADT 354

Query: 1290 SAARWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETV 1469
            SAARWQMA +SDS P EEEY QW +EVE   GR+P+K ++ EKKE I K+NTFVYSA TV
Sbjct: 355  SAARWQMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAATV 414

Query: 1470 KHMLQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNK 1649
            K MLQEKKSA++RPLN+AAEK++LRRE+E AQ ++DEA+VE+I AR+EEL A R A+  K
Sbjct: 415  KQMLQEKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEELEASRHAK-VK 473

Query: 1650 NSKAHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKDK 1829
            ++KA RLAEMNRKNRVENF+NAS++KP+NT LK+GEAGYDPFSRRWT S NYY +   + 
Sbjct: 474  DAKAIRLAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPAEA 533

Query: 1830 ANGDASEVAENNKG-------------GEKVGXXXXXXXXXXXXXXXXXVDTSAPVDQGT 1970
             +  A++++E N+                + G                 VDTSAPVDQGT
Sbjct: 534  DDPVATKISEANETVAVAASNQVVAGVMSEAGVAATEAALEAAADAGKLVDTSAPVDQGT 593

Query: 1971 EHNMLHNFELPISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVS 2150
            E N +H+FEL ISL  LQ+FGGPQG  AGFMARKQRIE T+G +VPENDGRRHALTL+V 
Sbjct: 594  ESNTMHSFELEISLIALQEFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVG 653

Query: 2151 DYKRRRG 2171
            DYKRRRG
Sbjct: 654  DYKRRRG 660


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
            RNA polymerase-associated protein RTF1 homolog isoform X2
            [Glycine max]
          Length = 656

 Score =  634 bits (1636), Expect = e-179
 Identities = 359/661 (54%), Positives = 429/661 (64%), Gaps = 19/661 (2%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            MADLENLLLEAA          H  P SRRR + AY                 Y  R  +
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60

Query: 426  GPQVPLKKR---GKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLAQL 596
            G QVPLKKR    +   D                            LYKDEDDR++L+++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 597  TELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSAD 776
            TEL+RE+ILS+RA K DDK L  ++ S  K    K    R+ +PP++SSR +R SARSAD
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIAS--KREKGKVAVPRKQSPPMSSSR-MRASARSAD 177

Query: 777  RAAHKADALNELRLKRMKQQGLDA------ARHGSGSRGYSPVKRKXXXXXXXXXXXXXX 938
            R+A K DALNELR KR+KQQ  +A      A   +GSR +SP KRK              
Sbjct: 178  RSA-KNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSE 236

Query: 939  XXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPFFE 1118
                            G  + DSDD+ +   S  P+++D+K ITIRRS+L KWFMEPFFE
Sbjct: 237  SESRSHSDDEGSTGDGG--IVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFE 294

Query: 1119 DLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESSAA 1298
            +LIVGCFVRVGIG      IYRLC+V+NVDAS+P++QYKLENK TYKYLN VWG+ESSAA
Sbjct: 295  ELIVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAA 354

Query: 1299 RWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVKHM 1478
            RWQMA +SDS PLEEE+ QW KEV+R+ GRMP+K +V EKK+ I+K  TFVYSA TVK M
Sbjct: 355  RWQMAMVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQM 414

Query: 1479 LQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKNSK 1658
            LQEKKSA+TRPLN+AAEK++LRRE+E AQ + DEA+VE+IK RL EL A RQA+  K++K
Sbjct: 415  LQEKKSASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEASRQAK-QKDAK 473

Query: 1659 AHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKDKA-- 1832
            A +LAEMNRKNR ENFKNAS++KP+NT LK+GEAGYDPFSRRWT S NYYA    +KA  
Sbjct: 474  ALKLAEMNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAA 533

Query: 1833 -----NGDASEVAENNKGG---EKVGXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHNMLH 1988
                 NG+ +    N  G     + G                 VDTSAPVDQGTE NMLH
Sbjct: 534  GNNSVNGNVAGAGSNGTGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLH 593

Query: 1989 NFELPISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYKRRR 2168
            NFELPISL  LQKFGG QG  AGFMARKQ+IE T+G +V ENDGRRHALTL+VSDYKRRR
Sbjct: 594  NFELPISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRR 653

Query: 2169 G 2171
            G
Sbjct: 654  G 654


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
            max]
          Length = 656

 Score =  632 bits (1629), Expect = e-178
 Identities = 357/661 (54%), Positives = 428/661 (64%), Gaps = 19/661 (2%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            MADLENLLLEAA          H  PPSRRR + AY                 Y  R  +
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 426  GPQVPLKKR---GKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLAQL 596
            G QVPLKKR    +   D                            LYKDEDDR++L+++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 597  TELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSAD 776
            TEL+RE+ILS+RA K DDK L  ++ S  K    K    R+ +PP++SSR +R SARSAD
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIAS--KREKGKAAAPRKQSPPMSSSR-MRASARSAD 177

Query: 777  RAAHKADALNELRLKRMKQQGLDA------ARHGSGSRGYSPVKRKXXXXXXXXXXXXXX 938
            R+A K DALNELR KR+KQQ  +A      A   +G R +SP KRK              
Sbjct: 178  RSA-KNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSE 236

Query: 939  XXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPFFE 1118
                            G  + DSDD+ +   S  P+++DIK ITIRRS+L KWFMEPFFE
Sbjct: 237  SESRSHSDDEGSTGDGG--IADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFE 294

Query: 1119 DLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESSAA 1298
            +LIVGCFVRVGIG      IYRLC+V+NVDAS+P++QYKLENK TYKYLN VWG+ESSAA
Sbjct: 295  ELIVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAA 354

Query: 1299 RWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVKHM 1478
            RWQMA +SDS P+EEE+ QW KEV+ + GRMP+K +V EKK+ I+K  TFVYSA TVK M
Sbjct: 355  RWQMAMVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQM 414

Query: 1479 LQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKNSK 1658
            LQEKKSA+TRPLN+AAEK++LRRE+E AQ ++DEA+VE+IK RL+EL A RQA+  K++K
Sbjct: 415  LQEKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAK-QKDAK 473

Query: 1659 AHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKDKA-- 1832
            A +LAEMNRKNR ENFKNAS+LKP+N  LK+GEAGYDPFSRRWT S NYYA    +KA  
Sbjct: 474  ALKLAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAA 533

Query: 1833 -----NGDASEVAENNKGG---EKVGXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHNMLH 1988
                 NG+ +    N  G     + G                 VDTSAPVDQGTE NMLH
Sbjct: 534  GNNIVNGNVAGAGSNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLH 593

Query: 1989 NFELPISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYKRRR 2168
            NFELPISL  LQK+GG  G  AGFMARKQRIE T+G +V ENDGRRHALTL+VSDYKRRR
Sbjct: 594  NFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRR 653

Query: 2169 G 2171
            G
Sbjct: 654  G 654


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
            gi|557524836|gb|ESR36142.1| hypothetical protein
            CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score =  631 bits (1627), Expect = e-178
 Identities = 361/660 (54%), Positives = 427/660 (64%), Gaps = 18/660 (2%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            MADLENLLLEAA          H A  S+RRRE +Y              NRGYG R  +
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDD--NRGYGSRKPS 58

Query: 426  GPQVPLKKR---GKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLAQL 596
            G QVPLKKR    +   DQ                              +E D     Q+
Sbjct: 59   GSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDS----------SNESDDDNHGQM 108

Query: 597  TELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSAD 776
            TELERE+++ ER  K  DK L ++ +SR +   ++     + TPPL SSR  R +ARSAD
Sbjct: 109  TELEREMMIFERDDKKVDKNLRDKFRSRREERSTR---STKETPPLPSSRSARLAARSAD 165

Query: 777  RAAHKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXXXX 935
            RAA K DALNELR KR+KQQ         DA+R GSGSR  SPVKRK             
Sbjct: 166  RAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQS 225

Query: 936  XXXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPFF 1115
                             G  M DSDD+   P S  PTY+DIK ITIRRS+L KWFMEPFF
Sbjct: 226  ESESRSHSDDEGSTGDGG--MADSDDD-GAPGSGRPTYDDIKEITIRRSKLAKWFMEPFF 282

Query: 1116 EDLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESSA 1295
            E+LIVGCFVRVGIG      IYRLC+VRNVDA++P++ YKLEN+ T KYLN  WG+ESSA
Sbjct: 283  EELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSA 342

Query: 1296 ARWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVKH 1475
            ARWQMA +SDSPPLEEE+ QW +EVER  GRMP+K +V EKKE I+K NTFVYSA TVK 
Sbjct: 343  ARWQMAMVSDSPPLEEEFKQWLREVERNGGRMPSKQDVLEKKESIQKINTFVYSAATVKQ 402

Query: 1476 MLQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKNS 1655
            MLQEKKSA++RPLN+AAEK++LRRE+E AQ R+D+  +E+IK RL+EL A R ++  K++
Sbjct: 403  MLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDDVDMERIKKRLQELEASRDSK-VKDA 461

Query: 1656 KAHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKD--- 1826
            KA RLAEMNRKNRVENFKNAS+LK +NT+LK+GEAGYDPFSRRWT S NYY +   +   
Sbjct: 462  KAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVT 521

Query: 1827 -KANGDASEVAENNKGGE----KVGXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHNMLHN 1991
             +ANGD + V     G E    +VG                 VDT+AP+D GTE NMLH+
Sbjct: 522  AEANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHD 581

Query: 1992 FELPISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYKRRRG 2171
            FEL ISLN L+KFGGPQGVLAGFMARKQRIE T+G QVPENDGRRHALTL+V DYKRRRG
Sbjct: 582  FELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRG 641


>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Citrus sinensis]
          Length = 643

 Score =  630 bits (1626), Expect = e-178
 Identities = 359/657 (54%), Positives = 426/657 (64%), Gaps = 15/657 (2%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            MADLENLLLEAA          H A  S+RRRE +Y              NRGYG R  +
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDD--NRGYGSRKPS 58

Query: 426  GPQVPLKKRGKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLAQLTEL 605
            G QVPLKKR   +                                 +E D     Q+TEL
Sbjct: 59   GSQVPLKKRLDPTERDDDQGSQEEGDYDGGASEHEGDS-------SNESDDDNHGQMTEL 111

Query: 606  ERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSADRAA 785
            ERE+++ ER  K  DK L ++ +SR +   ++     + TPPL SSR  R +ARSADRAA
Sbjct: 112  EREMMIFERDDKKVDKNLRDKFRSRREERSTR---STKETPPLPSSRSARLAARSADRAA 168

Query: 786  HKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXXXXXXX 944
             K DALNELR KR+KQQ         DA+R GSGSR  SPVKRK                
Sbjct: 169  AKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESE 228

Query: 945  XXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPFFEDL 1124
                          G  M DSDD+   P S  PTY+DIK ITIRRS+L KWFMEPFFE+L
Sbjct: 229  SRSHSDDEGSTGDGG--MADSDDD-GAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEEL 285

Query: 1125 IVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESSAARW 1304
            IVGCFVRVGIG      IYRLC+VRNVDA++P++ YKLEN+ T KYLN  WG+ESSAARW
Sbjct: 286  IVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARW 345

Query: 1305 QMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVKHMLQ 1484
            QMA +SDSPPLEEE+ QW +EVER +GRMP+K +V EKK+ I+K NTFVYSA TVK MLQ
Sbjct: 346  QMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKDSIQKINTFVYSAATVKQMLQ 405

Query: 1485 EKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKNSKAH 1664
            EKKSA++RPLN+AAEK++LRRE+E AQ R+DE  +E+IK RL+EL A R ++  K++KA 
Sbjct: 406  EKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSK-VKDAKAI 464

Query: 1665 RLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKD----KA 1832
            RLAEMNRKNRVENFKNAS+LK +NT+LK+GEAGYDPFSRRWT S NYY +   +    +A
Sbjct: 465  RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEA 524

Query: 1833 NGDASEVAENNKGGE----KVGXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHNMLHNFEL 2000
            NGD + V     G E    +VG                 VDT+AP+D GTE NMLH+FEL
Sbjct: 525  NGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFEL 584

Query: 2001 PISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYKRRRG 2171
             ISLN L+KFGGPQGVLAGFMARKQRIE T+G QVPENDGRRHALTL+V DYKRRRG
Sbjct: 585  DISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRG 641


>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
            vesca subsp. vesca]
          Length = 657

 Score =  630 bits (1625), Expect = e-178
 Identities = 362/667 (54%), Positives = 433/667 (64%), Gaps = 25/667 (3%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            MADL++LLLEAA          H    S+RRR+D+Y               RGY  R  +
Sbjct: 1    MADLDDLLLEAAGRTSSGRKSRHSHSSSKRRRDDSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 426  GPQVPLKKRGK-----DSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLA 590
            G QVPLKKR       D HD                            LYKDE+DR++LA
Sbjct: 61   GSQVPLKKRLDPSEVGDEHDSQDEGDYNDSGSDRGGESNESDVGSD--LYKDENDRRKLA 118

Query: 591  QLTELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARS 770
            +++EL+RELILS+RA K DDK L E+ + +W  +  K    R+ TPPL SSR VR+SARS
Sbjct: 119  EMSELQRELILSDRAQKKDDKSLKEKFRPKW--DKGKATQSRKVTPPLPSSR-VRSSARS 175

Query: 771  ADRAAHKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXX 929
            ADRAA K DALNELR KR+KQQ         D +R   GS+ +S   +K           
Sbjct: 176  ADRAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSVGSKNFSHTIKKSFSAVRRSSSS 235

Query: 930  XXXXXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEP 1109
                               G   DD+ D   +  +   T+EDIK ITIRRSRL KW MEP
Sbjct: 236  QSDSESRSHSDDD------GSSADDAIDSDDERGNQGLTFEDIKEITIRRSRLAKWLMEP 289

Query: 1110 FFEDLIVGCFVRVGIGM-KSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSE 1286
            FFE+LIVGC VRVGIG  KSG+ IYRLC V NVD+SDP++QYKLENK T+KYLN VWG+E
Sbjct: 290  FFEELIVGCCVRVGIGKTKSGRPIYRLCSVCNVDSSDPDRQYKLENKTTHKYLNVVWGNE 349

Query: 1287 SSAARWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAET 1466
            +SAARWQMA +SDS PLEEEY+QW +EVE+  GR+P+K +V EKKE I+KTNTFVYSA+T
Sbjct: 350  NSAARWQMAMVSDSLPLEEEYDQWVREVEKNGGRLPSKEDVLEKKEAIKKTNTFVYSAKT 409

Query: 1467 VKHMLQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDN 1646
            VK M+QEKKSA++RPLNIA EK++LRRE+E AQ ++D+A+VE+IKARLE+L A RQ    
Sbjct: 410  VKQMIQEKKSASSRPLNIALEKDRLRRELEIAQSKHDDAEVERIKARLEQLEA-RQQSQG 468

Query: 1647 KNSKAHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYAT---G 1817
            K+SKA RLAEMNRKNRV+NFKNAS LKP+ T LK+GEAGYDPFSRRWT S NYY +    
Sbjct: 469  KDSKAVRLAEMNRKNRVDNFKNASGLKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPDE 528

Query: 1818 SKDKANGDA------SEVAENNKGG---EKVGXXXXXXXXXXXXXXXXXVDTSAPVDQGT 1970
             KD A  +A      +EV  N  GG    + G                 +DT APVDQGT
Sbjct: 529  QKDDAEANAVAAESLAEVETNGTGGVVAVRAGLEATAAALEAAAGAGKLIDTMAPVDQGT 588

Query: 1971 EHNMLHNFELPISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVS 2150
              N LHNFELPISL TLQKFGGPQG   GFMARKQRIE T+G++VPE+DGRRHALTLSVS
Sbjct: 589  SSNPLHNFELPISLATLQKFGGPQGAQEGFMARKQRIEATVGVRVPEDDGRRHALTLSVS 648

Query: 2151 DYKRRRG 2171
            DYKRRRG
Sbjct: 649  DYKRRRG 655


>gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
          Length = 646

 Score =  629 bits (1621), Expect = e-177
 Identities = 359/664 (54%), Positives = 432/664 (65%), Gaps = 22/664 (3%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            MADLENLLLEAA          H    SRRRR  +Y               RGY  R  +
Sbjct: 1    MADLENLLLEAAGRTSSAGKSRHSHSSSRRRRGGSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 426  GPQVPLKKRGKDSH---DQXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRQQLAQL 596
            G QVPLKKR   +    +Q                           LYKDEDDR++LA++
Sbjct: 61   GTQVPLKKRLDPTEMDDEQGSQEEGDYNDSGSDRGGDSNESDVGSDLYKDEDDRRKLAEM 120

Query: 597  TELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSAD 776
            +EL+RELILS+RA K DDK L E+ +           PK+E TPPL SSR VR+SARSAD
Sbjct: 121  SELQRELILSDRAQKKDDKSLKEKFR-----------PKKE-TPPLPSSR-VRSSARSAD 167

Query: 777  RAAHKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXXXX 935
            RAA K DALNELR KR+KQQ         DA+R  SGSR +S + RK             
Sbjct: 168  RAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRSFSHMTRKSFTAVGRSSSSQS 227

Query: 936  XXXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPFF 1115
                           +    M DSDDE S+      T++DIK ITIRRS+L KW MEPFF
Sbjct: 228  DSDSRSHSEDDGSTGEDP--MMDSDDERSEGL----TFDDIKEITIRRSKLAKWLMEPFF 281

Query: 1116 EDLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESSA 1295
            E+LIVGCFVRVGIG      IYRLC+VRNVDASDP+++YKLENK T+KYLN VWG+E+SA
Sbjct: 282  EELIVGCFVRVGIGRSKSGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSA 341

Query: 1296 ARWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVKH 1475
            ARWQMA ISDS PLEEE+ QW +EVER+ GR+P+K +V EKKE I+K NTFVYSA TVK 
Sbjct: 342  ARWQMAMISDSAPLEEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQ 401

Query: 1476 MLQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKNS 1655
            M++EKKSA++RPLNIA EK++LRRE+E AQ ++D+A+VE+IK RL++L A RQ+Q  K+S
Sbjct: 402  MIEEKKSASSRPLNIALEKDRLRRELEVAQSKHDDAEVERIKTRLQQLEARRQSQ-GKDS 460

Query: 1656 KAHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKDK-- 1829
            KA RLAEMNRKNRVENFKNAS+LKP+ T LK+GEAGYDPFSRRWT S NYY +   ++  
Sbjct: 461  KAVRLAEMNRKNRVENFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKG 520

Query: 1830 -------ANGDASEVAENNK---GGEKVGXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHN 1979
                   A+G  +++  N     G  + G                 +DTSAPVD GTE N
Sbjct: 521  EAEAIVDADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESN 580

Query: 1980 MLHNFELPISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYK 2159
            ++HNFELPISL TLQKFGGPQG   GF+ARKQRIE T+G +VPENDGRRHALTL+VSDYK
Sbjct: 581  LMHNFELPISLATLQKFGGPQGAQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYK 640

Query: 2160 RRRG 2171
            RR G
Sbjct: 641  RRMG 644


>ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutrema salsugineum]
            gi|557088572|gb|ESQ29352.1| hypothetical protein
            EUTSA_v10023338mg [Eutrema salsugineum]
          Length = 644

 Score =  623 bits (1607), Expect = e-175
 Identities = 346/656 (52%), Positives = 426/656 (64%), Gaps = 14/656 (2%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            M DL++LLLEAA          H  PPS RRRE +Y               RGY  R  +
Sbjct: 1    MVDLDDLLLEAAGRTNAPGRSRHSHPPSSRRREGSYSDGGSDSRDDSDE-ERGYASRKPS 59

Query: 426  GPQVPLKKRGKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRQQLAQLT 599
            G QVPLKKR +   +                              LYK+E+DRQ+LA +T
Sbjct: 60   GSQVPLKKRLEAEREDRAARDEAGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMT 119

Query: 600  ELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSADR 779
            E +RE+IL+ERA K  DK   E+++S+ +  +  P  K+E T PL +SRGVR+SARSADR
Sbjct: 120  EFQREMILAERADKKGDKNFTEKLRSK-REKEKTPVSKKE-TQPLPASRGVRSSARSADR 177

Query: 780  AAHKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXXXXX 938
            AA K DALNELR KRMKQQ         DA++ GSGSR +S +KRK              
Sbjct: 178  AAAKDDALNELRAKRMKQQEPASLRKLRDASKGGSGSRDFSSMKRKPLASSNLSNSSQSD 237

Query: 939  XXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPFFE 1118
                            G  +D  DD     +S++PT+EDIK ITIRRS+L KW MEPFFE
Sbjct: 238  SDSRSQSDDEG---SNGGMVDSDDD-----RSDVPTFEDIKDITIRRSKLAKWLMEPFFE 289

Query: 1119 DLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESSAA 1298
            +LIVGCFVRVGIG      IYRLC+V+NVDA+DP+K YKLENK T+KYLNC+WG ESSAA
Sbjct: 290  ELIVGCFVRVGIGRSKNGPIYRLCMVKNVDATDPDKTYKLENKTTHKYLNCIWGHESSAA 349

Query: 1299 RWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVKHM 1478
            RWQMA ISD  PLEEEY QW +EVERTNGRMPTK +++EKKE I++ N+FVYSAETVK M
Sbjct: 350  RWQMAMISDGYPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIKRINSFVYSAETVKQM 409

Query: 1479 LQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKNSK 1658
            LQEKKSA+ RP+NIAAEK++LR+E+E AQ +NDEA VE+IKA++++L A R+ ++  + K
Sbjct: 410  LQEKKSASVRPMNIAAEKDRLRKELEVAQIKNDEAGVERIKAKIKQLEASREKKE-VDKK 468

Query: 1659 AHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKDKANG 1838
            A +LAEMN+KNR ENFKNAS++K I  +LK+GEAGYDPFSRRWT S+NYY    K K  G
Sbjct: 469  ALKLAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYY--NGKRKEGG 526

Query: 1839 D-----ASEVAENNKGGEKVGXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHNMLHNFELP 2003
            D     A+ V  N     + G                 +DT AP+ QG EHN+LHNFELP
Sbjct: 527  DTEATAAAAVETNGAAAGENGVEATEAALEAAADAGKLIDTRAPIGQGAEHNLLHNFELP 586

Query: 2004 ISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYKRRRG 2171
            +SL  LQK+GGPQGV   FMARKQ  E T+G +V ENDG+RH LTL+VSDYKRRRG
Sbjct: 587  LSLTALQKYGGPQGVQKAFMARKQVTEATVGCRVAENDGKRHGLTLTVSDYKRRRG 642


>ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis thaliana]
            gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein;
            78902-80833 [Arabidopsis thaliana]
            gi|332195649|gb|AEE33770.1| Paf1C-like transcription
            factor [Arabidopsis thaliana]
          Length = 643

 Score =  614 bits (1584), Expect = e-173
 Identities = 344/656 (52%), Positives = 425/656 (64%), Gaps = 14/656 (2%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            M DLENLLLEAA          HP  PS RRRE +Y              +RGY  R  +
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSRHP--PSSRRREGSYSDGSSDSRDDSDE-DRGYASRKPS 57

Query: 426  GPQVPLKKRGKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRQQLAQLT 599
            G QVPLKKR +   +                              LYK+E+DRQ+LA +T
Sbjct: 58   GSQVPLKKRLEAEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMT 117

Query: 600  ELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSADR 779
            E +RE+ILSERA K  DK   E+++S+ + ++  P  K+E T PL +SRGVR+SARSADR
Sbjct: 118  EFQREMILSERADKKGDKNFTEKLRSK-RESEKTPVSKKE-TQPLPASRGVRSSARSADR 175

Query: 780  AAHKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXXXXX 938
            AA K DALNELR KRMKQQ         DA++ GSGSR +S  KRK              
Sbjct: 176  AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 235

Query: 939  XXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPFFE 1118
                            G  +D  DD     +S++PT+ED+K +TIRRS+L KW MEPFFE
Sbjct: 236  SDSRSQSDDEG---SNGGMLDSDDD-----RSDVPTFEDVKEVTIRRSKLAKWLMEPFFE 287

Query: 1119 DLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESSAA 1298
            +LIVGCFVRVGIG      IYRLC V+NVDA+DP+K YKLENK T+KYLN VWG+E+SAA
Sbjct: 288  ELIVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAA 347

Query: 1299 RWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVKHM 1478
            RWQMA ISD  PLEEEY QW +EVERTNGRMPTK +++EKKE I++TN+FVYSAETVK M
Sbjct: 348  RWQMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQM 407

Query: 1479 LQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKNSK 1658
            LQEKKSA+ RP+N+AAEK++LR+E+E AQ +NDEA VE+IK+++++L A R  +   + K
Sbjct: 408  LQEKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRN-KKGVDKK 466

Query: 1659 AHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKDKANG 1838
            A +LAEMN+KNR ENFKNAS++K I  +LK+GEAGYDPFSRRWT S+NYY   +K K +G
Sbjct: 467  ALKLAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGK-DG 525

Query: 1839 DASEVA-----ENNKGGEKVGXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHNMLHNFELP 2003
            + +E A     E N      G                 +DT AP+ QG EHN LHNFEL 
Sbjct: 526  EENEAAVAAAVETNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELS 585

Query: 2004 ISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYKRRRG 2171
            +SL  LQK+GGPQGV   FMARKQ  E T+G +V ENDG+RH LTL+VSDYKRRRG
Sbjct: 586  LSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRG 641


>gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]
          Length = 643

 Score =  614 bits (1584), Expect = e-173
 Identities = 344/656 (52%), Positives = 425/656 (64%), Gaps = 14/656 (2%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            M DLENLLLEAA          HP  PS RRRE +Y              +RGY  R  +
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSSHP--PSSRRREGSYSDGSSDSRDDSDE-DRGYASRKPS 57

Query: 426  GPQVPLKKRGKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRQQLAQLT 599
            G QVPLKKR +   +                              LYK+E+DRQ+LA +T
Sbjct: 58   GSQVPLKKRLEAEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMT 117

Query: 600  ELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSADR 779
            E +RE+ILSERA K  DK   E+++S+ + ++  P  K+E T PL +SRGVR+SARSADR
Sbjct: 118  EFQREMILSERADKKGDKNFTEKLRSK-RESEKTPVSKKE-TQPLPASRGVRSSARSADR 175

Query: 780  AAHKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXXXXX 938
            AA K DALNELR KRMKQQ         DA++ GSGSR +S  KRK              
Sbjct: 176  AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 235

Query: 939  XXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPFFE 1118
                            G  +D  DD     +S++PT+ED+K +TIRRS+L KW MEPFFE
Sbjct: 236  SDSRSQSDDEG---SNGGMLDSDDD-----RSDVPTFEDVKEVTIRRSKLAKWLMEPFFE 287

Query: 1119 DLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESSAA 1298
            +LIVGCFVRVGIG      IYRLC V+NVDA+DP+K YKLENK T+KYLN VWG+E+SAA
Sbjct: 288  ELIVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAA 347

Query: 1299 RWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVKHM 1478
            RWQMA ISD  PLEEEY QW +EVERTNGRMPTK +++EKKE I++TN+FVYSAETVK M
Sbjct: 348  RWQMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQM 407

Query: 1479 LQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKNSK 1658
            LQEKKSA+ RP+N+AAEK++LR+E+E AQ +NDEA VE+IK+++++L A R  +   + K
Sbjct: 408  LQEKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRN-KKGVDKK 466

Query: 1659 AHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKDKANG 1838
            A +LAEMN+KNR ENFKNAS++K I  +LK+GEAGYDPFSRRWT S+NYY   +K K +G
Sbjct: 467  ALKLAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGK-DG 525

Query: 1839 DASEVA-----ENNKGGEKVGXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHNMLHNFELP 2003
            + +E A     E N      G                 +DT AP+ QG EHN LHNFEL 
Sbjct: 526  EENEAAVAAAVETNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELS 585

Query: 2004 ISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYKRRRG 2171
            +SL  LQK+GGPQGV   FMARKQ  E T+G +V ENDG+RH LTL+VSDYKRRRG
Sbjct: 586  LSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRG 641


>ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp. lyrata]
            gi|297333952|gb|EFH64370.1| At1g61040/T7P1_17
            [Arabidopsis lyrata subsp. lyrata]
          Length = 643

 Score =  612 bits (1578), Expect = e-172
 Identities = 345/656 (52%), Positives = 426/656 (64%), Gaps = 14/656 (2%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            M DLENLLLEAA          HP  PS RRRE +Y              +RGY  R  +
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSRHP--PSSRRREGSYSDGSSDSRDDSDE-DRGYASRKPS 57

Query: 426  GPQVPLKKRGKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRQQLAQLT 599
            G QVPLKKR +   +                              LYK+E+DRQ+LA +T
Sbjct: 58   GSQVPLKKRLEAEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMT 117

Query: 600  ELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSADR 779
            E +RE+IL+ERA K  DK   E+++S+ + N+  P  K+E T PL +SRGVR+SARSADR
Sbjct: 118  EFQREMILAERADKKGDKNFTEKLRSK-RENEKTPVSKKE-TQPLPASRGVRSSARSADR 175

Query: 780  AAHKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXXXXX 938
            AA K DALNELR KRMKQQ         DA++ GSGSR +S +KRK              
Sbjct: 176  AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSMKRKPLASSNLSSSSQSD 235

Query: 939  XXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPFFE 1118
                               M DSDD+    +S++PT+ED+K ITIRRS+L KW MEPFFE
Sbjct: 236  SDSRSQSDDEGS----NAGMLDSDDD----RSDVPTFEDVKEITIRRSKLAKWLMEPFFE 287

Query: 1119 DLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESSAA 1298
            +LIVGCFVRVGIG      IYRLC V+NVDA+DP+K YKLENK T+KYLN VWG+E+SAA
Sbjct: 288  ELIVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAA 347

Query: 1299 RWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVKHM 1478
            RWQMA ISD  PLEEEY QW +EVERTNGRMPTK +++EKKE I++ N+FVYSAETVK M
Sbjct: 348  RWQMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRINSFVYSAETVKQM 407

Query: 1479 LQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKNSK 1658
            LQEKKSA+ RP+N+AAEK++LR+E+E AQ +NDEA VE+IK ++++L A R  +   + K
Sbjct: 408  LQEKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKTKIKQLDASRN-KKGVDKK 466

Query: 1659 AHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKDKANG 1838
            A +LAEMN+KNR ENFKNAS++K I+ +LK+GEAGYDPFSRRWT S+NYY   +K K +G
Sbjct: 467  ALKLAEMNKKNRAENFKNASEVKSISASLKAGEAGYDPFSRRWTRSSNYYNGKNKGK-DG 525

Query: 1839 DASEVA-----ENNKGGEKVGXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHNMLHNFELP 2003
            + +E A     E N      G                 +DT AP+ QG EHN LHNFEL 
Sbjct: 526  EENETAVAAAVETNGADVGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELS 585

Query: 2004 ISLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYKRRRG 2171
            +SL  LQK+GGPQGV   FMARKQ  E T+G +V ENDG+RH LTL+VSDYKRRRG
Sbjct: 586  LSLTALQKYGGPQGVQKAFMARKQVTEATVGCRVAENDGKRHGLTLTVSDYKRRRG 641


>ref|XP_006300844.1| hypothetical protein CARUB_v10019938mg [Capsella rubella]
            gi|482569554|gb|EOA33742.1| hypothetical protein
            CARUB_v10019938mg [Capsella rubella]
          Length = 644

 Score =  610 bits (1572), Expect = e-171
 Identities = 343/655 (52%), Positives = 423/655 (64%), Gaps = 13/655 (1%)
 Frame = +3

Query: 246  MADLENLLLEAAXXXXXXXXXXHPAPPSRRRREDAYXXXXXXXXXXXXXXNRGYGGRNSN 425
            M DLENLLLEAA          H  PPS RRRE +Y              +RG+  R  +
Sbjct: 1    MGDLENLLLEAAGRTNPAGKSRHSHPPSSRRREGSYSDGSSDSRDDSDD-DRGFASRKPS 59

Query: 426  GPQVPLKKRGKDSHDQXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRQQLAQLT 599
            G QVPLKKR +   +                              LYK+E+DRQ+LA +T
Sbjct: 60   GSQVPLKKRLEAEREDRAARNESGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMT 119

Query: 600  ELERELILSERALKLDDKKLHERVKSRWKNNDSKPQPKRESTPPLASSRGVRTSARSADR 779
            E +RE+IL+ERA K  DK   E+++S+ + N+  P  K+E T PL +SRGVR+SARSADR
Sbjct: 120  EFQREMILAERADKKGDKNFTEKLRSK-RENEKTPVSKKE-TQPLPASRGVRSSARSADR 177

Query: 780  AAHKADALNELRLKRMKQQG-------LDAARHGSGSRGYSPVKRKXXXXXXXXXXXXXX 938
            AA K DALNELR KRMKQQ         DA++ GSGSR +S +KRK              
Sbjct: 178  AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSLKRKPLASSNLSNSSQSD 237

Query: 939  XXXXXXXXXXXXXXKRGRRMDDSDDEMSKPKSNIPTYEDIKGITIRRSRLGKWFMEPFFE 1118
                                 DSDD+    +S++PT+EDIK ITIRRS+L KW MEPFFE
Sbjct: 238  SDSRSQSDDEGSNAGL-----DSDDD----RSDMPTFEDIKEITIRRSKLAKWLMEPFFE 288

Query: 1119 DLIVGCFVRVGIGMKSGQSIYRLCIVRNVDASDPNKQYKLENKMTYKYLNCVWGSESSAA 1298
            +LIVGCFVRVGIG      IYRLC+VRNVDA+DP+K YKLENK T+KYLN +WG+E+SAA
Sbjct: 289  ELIVGCFVRVGIGRSKSGPIYRLCMVRNVDATDPDKTYKLENKTTHKYLNVIWGNETSAA 348

Query: 1299 RWQMARISDSPPLEEEYNQWKKEVERTNGRMPTKHEVAEKKEEIEKTNTFVYSAETVKHM 1478
            RWQMA ISD  PLEEEY QW +EVERTNGRMPTK +++EKKE I++ N+F+YSAETVK M
Sbjct: 349  RWQMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIKRINSFIYSAETVKQM 408

Query: 1479 LQEKKSAATRPLNIAAEKEKLRREMEAAQYRNDEAQVEKIKARLEELAAVRQAQDNKNSK 1658
            LQEKKSA+ RP+N+AAEK++LR+E+E AQ +NDEA VE+IK ++++L A R  +   + K
Sbjct: 409  LQEKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKTKIKQLDASRN-KKGVDKK 467

Query: 1659 AHRLAEMNRKNRVENFKNASQLKPINTNLKSGEAGYDPFSRRWTMSTNYYATGSKDK--A 1832
            A +LAEMN+KNR ENFKNAS++K I  +LK GEAGYDPFSRRWT S+NYY   +K K  A
Sbjct: 468  ALKLAEMNKKNRAENFKNASEVKSITASLKVGEAGYDPFSRRWTRSSNYYNGKNKGKEGA 527

Query: 1833 NGDASEVA--ENNKGGEKVGXXXXXXXXXXXXXXXXXVDTSAPVDQGTEHNMLHNFELPI 2006
              +A+  A  E N      G                 +DT AP+ QG EHN LHNFEL +
Sbjct: 528  ENEAAVAAAVETNGVDAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELSV 587

Query: 2007 SLNTLQKFGGPQGVLAGFMARKQRIEGTIGLQVPENDGRRHALTLSVSDYKRRRG 2171
            SL  LQK+GGPQGV   FMARKQ  E T+G +V ENDG+RH LTL+VSDYKRRRG
Sbjct: 588  SLAALQKYGGPQGVQKAFMARKQVTEATVGCRVAENDGKRHGLTLTVSDYKRRRG 642