BLASTX nr result

ID: Achyranthes22_contig00009018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00009018
         (2305 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ73524.1| circadian clock associated1 [Mesembryanthemum cry...   541   e-164
gb|ACL81163.1| late elongated hypocotyl-like protein [Mirabilis ...   398   e-118
emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]   377   e-113
ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]      377   e-113
gb|EOX95552.1| Homeodomain-like superfamily protein isoform 1 [T...   355   e-108
ref|XP_006491389.1| PREDICTED: protein LHY-like isoform X1 [Citr...   347   e-105
ref|XP_006444706.1| hypothetical protein CICLE_v10018964mg [Citr...   347   e-105
gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]             342   e-104
gb|EMJ20128.1| hypothetical protein PRUPE_ppa001765mg [Prunus pe...   342   e-103
ref|XP_002515093.1| conserved hypothetical protein [Ricinus comm...   335   e-101
dbj|BAH09383.1| transcription factor LHY [Populus nigra] gi|2196...   333   e-100
gb|EOX95556.1| Homeodomain-like superfamily protein isoform 5 [T...   322   1e-98
gb|ABK96054.1| unknown [Populus trichocarpa]                          329   3e-98
gb|EOX95554.1| Homeodomain-like superfamily protein isoform 3 [T...   319   7e-98
dbj|BAH09382.1| transcription factor LHY [Populus nigra] gi|2196...   333   1e-97
ref|XP_006386663.1| hypothetical protein POPTR_0002s18190g [Popu...   333   2e-97
ref|XP_006598673.1| PREDICTED: late elongated hypocotyl and circ...   301   2e-91
ref|NP_001235187.1| late elongated hypocotyl and circadian clock...   301   2e-91
ref|XP_003528756.1| PREDICTED: protein LHY isoform X1 [Glycine m...   291   6e-88
ref|NP_001236400.1| MYB transcription factor MYB114 [Glycine max...   280   4e-84

>gb|AAQ73524.1| circadian clock associated1 [Mesembryanthemum crystallinum]
          Length = 739

 Score =  541 bits (1394), Expect(2) = e-164
 Identities = 319/625 (51%), Positives = 380/625 (60%), Gaps = 9/625 (1%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKG+PI QAIDIEI            
Sbjct: 44   RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIQQAIDIEIPPPRPKRKPSNP 103

Query: 2125 XXXKIGT-NSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNG 1949
               K G   SP++Q++  DG ++PPGS  TA Q++DLEKE   E   G DG+ + KET G
Sbjct: 104  YPRKTGAAGSPSTQIKVKDGNKVPPGSSHTANQLLDLEKEPPPENTTGDDGKQNAKETCG 163

Query: 1948 E-KCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLINNETRELNAS 1772
              KC+++ T F E PS+L AS N+  A + G+ RK     + V  KK L++ +  +  A+
Sbjct: 164  AYKCSETFTLFQEAPSTLTASGNENSAITTGATRKSCKVDDPVP-KKLLVDIDGSDCPAA 222

Query: 1771 SDVHDRSHKPDKPDVSEMVQNDSENETSAAKNFPRHAPVQILDGSLASCSQGLSSDVSYQ 1592
             D   R+ K DK D  E  QND+ENE  A KNFPRH PV ILDGSL +CSQ LSSDVSYQ
Sbjct: 223  -DGRQRNQKLDKTDTVETAQNDTENEMHAVKNFPRHTPVHILDGSLGACSQALSSDVSYQ 281

Query: 1591 EPAFYQMGIPSPSALFSNPTVSTAVESQTSTSRSNDHHPMFPNSHLPFNQLPHTQEDYXX 1412
            E AF++MGIP   A+FSNP VS AVESQ STSR+ +   MF + H PF   P+T EDY  
Sbjct: 282  ESAFHRMGIPGYPAIFSNPAVSAAVESQNSTSRTTNQQ-MFTSFHPPFTPFPNTPEDYSS 340

Query: 1411 XXXXXXXXXSMIVSALLQNPXXXXXXXXXXXFWPGPNMENTAHSPTGLGGGFPPRPIGXX 1232
                     S+IVSALLQNP           FWP  NMEN+A+ P GL GGFPPRP+   
Sbjct: 341  FVQMSATFSSLIVSALLQNPAAHAAASFAASFWPCSNMENSANCPAGLSGGFPPRPMNTA 400

Query: 1231 XXXXXXXXXXXXXXXXXXATHGLLPL*APPHAGFSCPPNPTTTPSANFTQAPVASEEREE 1052
                              A HGLLPL AP H+GF+CPP     P  N  Q+   ++EREE
Sbjct: 401  PSMAAIAGATVAAATAWWAAHGLLPLCAPVHSGFNCPPASANAPLTNVAQSQATNKEREE 460

Query: 1051 NNFQTPESQVEKPNQELSEALQPQHXXXXXXXXXXXXXXXXXXXNLDLEVEASNKEKKVL 872
            NNFQ P SQV++P+QELSEALQPQH                    +++E+  ++ E KV 
Sbjct: 461  NNFQNPGSQVQQPDQELSEALQPQHSASKPSATSSSDSGDSAGAKMEIEIPTNDNEIKV- 519

Query: 871  PSLXXXXXXXXXXXXXXXXXXXXXSNTPSGSDVKTDALGKNEDEKEEVKETDATRATSEP 692
            P++                     SNTPSGSDV+TDAL KN+  KEE  E D ++   E 
Sbjct: 520  PAMTEQKDSSKGKSKKLVDRSSCGSNTPSGSDVETDALQKNDKGKEEPLEPDISQIAGEL 579

Query: 691  NSRRNRIASN-----LSEVSEGGRLAFQALFSREVLPQSFSPPQYGPDKKQEMNDNAEGN 527
            N+RRNRIASN       EVSEGGRLAFQALFSRE LPQSFSPPQ      Q MN+  E N
Sbjct: 580  NNRRNRIASNNLNDSWKEVSEGGRLAFQALFSRERLPQSFSPPQDVSIMDQVMNNGVERN 639

Query: 526  RQNAAESN-FASQLDL-KNTWESCS 458
             QNA E+N  ASQLDL  NTWESCS
Sbjct: 640  GQNATETNEDASQLDLNSNTWESCS 664



 Score = 68.2 bits (165), Expect(2) = e-164
 Identities = 35/60 (58%), Positives = 43/60 (71%)
 Frame = -3

Query: 410 KDGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAAS 231
           KD  L     Q K +  RTGFKPYKRCSVEARES    NS++ +QEKC KR+RLEG+A++
Sbjct: 682 KDHFLSIGLAQGKPRDRRTGFKPYKRCSVEARESR--LNSNSQDQEKCPKRIRLEGEAST 739


>gb|ACL81163.1| late elongated hypocotyl-like protein [Mirabilis jalapa]
          Length = 696

 Score =  398 bits (1022), Expect(2) = e-118
 Identities = 257/624 (41%), Positives = 330/624 (52%), Gaps = 9/624 (1%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKG+ +GQAIDIEI            
Sbjct: 44   RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVAVGQAIDIEIPPPRPKRKPNTP 103

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNG- 1949
               K G  SPN+Q+R  DGKQ+P GS  T    +DLE++ + E   G DG+ S +E  G 
Sbjct: 104  YPRKTGATSPNTQLRVIDGKQVPTGSSPTTN--LDLEEQHLSERTAGSDGKPSAEENCGY 161

Query: 1948 EKCTKSLTCFNEVPSSLGASS-NQVMATSVGSARKLSNFKEFVSTKKPLINNETRELNAS 1772
            E C+++LT F + PS+L A+S ++  AT+  +  K  N K  V  +K L+NN+ R ++  
Sbjct: 162  ETCSETLTLFKDTPSNLAAASTDENSATTAETTIKSHNLKVPVPMEKQLVNND-RYVSPD 220

Query: 1771 SDVHDRSHKPDKPDVSEMVQNDSENETSAAKNFPRHAPVQILDGSLASCSQGLSSDVSYQ 1592
             D  +R+HK   PD     QN+  NE  AAK F RHAPVQILDGS+ + SQ  SSDVS+Q
Sbjct: 221  PDGTNRNHKDGNPDTVMTAQNEPGNEMHAAKTFLRHAPVQILDGSIGASSQAPSSDVSFQ 280

Query: 1591 EPAFYQMGIPSPSALFSNPTVSTAVESQTSTSRSNDHHPMFPNSHLPFNQLPHTQEDYXX 1412
            E +F+ MGIP    L+S P        Q STSRSNDH P F   H PF  LP+ QE    
Sbjct: 281  ESSFHHMGIPGHPGLYSYP--------QNSTSRSNDHQPSF---HPPFTMLPNIQEYSPY 329

Query: 1411 XXXXXXXXXSMIVSALLQNPXXXXXXXXXXXFWPGPNMENTAHSPTGLGGGFPPRPIGXX 1232
                     ++I+S LLQNP           +WP   ++++++ P G   G     I   
Sbjct: 330  MQHISLTFSNLIISTLLQNPAAHAAASFAASYWPSATVDSSSNCPGGTNNGVFSHSIAAI 389

Query: 1231 XXXXXXXXXXXXXXXXXXATHGLLPL*APPHAGFSCPPNPTTTPSANFTQAPVASEEREE 1052
                                HGLLP  +P H GFSCP      P AN  Q     E+R E
Sbjct: 390  AAATVAAATAWWA------AHGLLPSCSPHHVGFSCP-----NPFANDVQTQANGEKRVE 438

Query: 1051 NNFQTPESQVEKPNQELSEALQPQHXXXXXXXXXXXXXXXXXXXNLDLEVEASNKEKKVL 872
            NN +  + ++ K ++  S                            +L + A +  K V+
Sbjct: 439  NNEKHTDLEIPKSSETSSS-----------------DCGNIPEAKKELVIGADSDNKDVV 481

Query: 871  PSLXXXXXXXXXXXXXXXXXXXXXSNTPSGSDVKTDALGKNEDEKEEVKETDATRATSEP 692
            P++                     SNTPSGSD +T AL KN +  EE  E D+ +  +E 
Sbjct: 482  PAMTEQKELSLTKTKKQVDRSSCGSNTPSGSDAETVALQKNNEGNEEPNEPDSCQPANET 541

Query: 691  NSRRNRIAS----NLSEVSEGGRLAFQALFSREVLPQSFSPPQYGPDKKQEMNDNAEGNR 524
             +RRNR+A     N   VSEGGRLAFQALFSRE LPQSFSPP    D  ++  D  + N 
Sbjct: 542  GNRRNRVAGCINDNWKAVSEGGRLAFQALFSRERLPQSFSPPHEDTDIDKQPKDGVDENM 601

Query: 523  QNAAESN--FASQLDLK-NTWESC 461
            QNA ++N    S+LDL  NTWESC
Sbjct: 602  QNAVKNNEEDESKLDLNCNTWESC 625



 Score = 55.8 bits (133), Expect(2) = e-118
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = -3

Query: 371 LKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLE 246
           LKT +TGFKPYKRCSVEARES    NSS+ E E+  KRLR+E
Sbjct: 652 LKTRKTGFKPYKRCSVEARES--TMNSSSQEPEQRCKRLRVE 691


>emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]
          Length = 857

 Score =  377 bits (969), Expect(2) = e-113
 Identities = 262/661 (39%), Positives = 329/661 (49%), Gaps = 44/661 (6%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKG+PIGQAIDIEI            
Sbjct: 130  RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGQAIDIEIPPPRPKRKPSNP 189

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPP-GSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNG 1949
               K G  +P  Q  T DGK +    S    +Q++DLEK+ + E P G +   +  E   
Sbjct: 190  YPRKTGVAAPTLQAGTKDGKLLASVSSXHPGKQILDLEKDPLPERPSGDEKPGNENENQD 249

Query: 1948 E-KCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLIN-NETRE--- 1784
            E  C++  T F E P +  +S+N+    +    R    F+EFV   K   N +ET E   
Sbjct: 250  EDNCSEVFTLFQEAPCTSMSSANKNSIPTPVPLRNSCTFREFVPLMKEGSNQDETNESYI 309

Query: 1783 -----------------------------LNASSDVHDR---SHKPDKPDVSEMVQNDSE 1700
                                         L  S   H++   + K D+P  SE   +  +
Sbjct: 310  TVEPKGNQKLDKPDFRQKAQDSGMSKASNLENSHPSHEKLVQAEKTDEPSQSENFGSQPK 369

Query: 1699 NETSAAKNFPRHAPVQILDGSLASCSQGLSSDVSYQEPAFYQMGIPSPSALFSNPTVSTA 1520
            NE  AA+NFPRH PV +LDGSL +C+Q  SS+++Y E   +Q+GI     LF NP  S A
Sbjct: 370  NEMQAAQNFPRHVPVHVLDGSLGTCTQAPSSEMTYGESLVHQIGIHGHPNLFQNPAASAA 429

Query: 1519 VESQTSTSRSNDHHPMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXX 1340
             E Q + SRS+ H   FP  H PF  +   Q+DY           S+IVS LLQNP    
Sbjct: 430  TEHQNNGSRSSIHQ-SFPTFHTPFGPIRSNQDDYRSFLQISSTFSSLIVSTLLQNPAAHA 488

Query: 1339 XXXXXXXFWPGPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLL 1160
                   FWP  NME +A SP+G  GGFP R I                     A HG+L
Sbjct: 489  AASFAATFWPCSNMEASADSPSGTIGGFPARQINPAPSMAAIAAATVAAATAWWAAHGVL 548

Query: 1159 PL*APPHAGFSC-PPNPTTTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQP 983
            PL AP H GF+C P + T+ P  N  QAP A+ ER EN   TP+ Q  + + E SEALQ 
Sbjct: 549  PLCAPLHTGFTCAPASATSVPPTNTGQAPAANTERREN---TPQDQ--QLDLECSEALQA 603

Query: 982  QHXXXXXXXXXXXXXXXXXXXNLDLEVEASNKEKKVLPSLXXXXXXXXXXXXXXXXXXXX 803
            QH                     + E  A + EK    ++                    
Sbjct: 604  QHSASKSPAMSSSDSEESGGAKPNTESTAPDNEKNT-TAVTELNDPTKMKSRKQVDRSSC 662

Query: 802  XSNTPSGSDVKTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS----EVSEGGR 635
             SNTPS S+V+TDAL K+E+ +EE KE D  +A  E N+RR R  S L+    EVSE GR
Sbjct: 663  GSNTPSSSEVETDALEKHENGEEECKEADVNQAAGEANNRRCRSTSILNESWKEVSEEGR 722

Query: 634  LAFQALFSREVLPQSFSPPQYGPDKKQEMNDNAEGNRQNAAESNFASQLDLKN-TWESCS 458
            LAF+ALFSREVLPQSFSPP    +K  +  D  E  +    +   A QLDL +  W  CS
Sbjct: 723  LAFRALFSREVLPQSFSPPHDLKNKGLQNKDFIENEQGGDEKHENALQLDLNSKAWGPCS 782

Query: 457  S 455
            S
Sbjct: 783  S 783



 Score = 60.8 bits (146), Expect(2) = e-113
 Identities = 32/60 (53%), Positives = 42/60 (70%)
 Frame = -3

Query: 410 KDGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAAS 231
           ++G+L       K+K  RTGFKPYKRCSVEA +S RVTN  +  +EK  KR+RLEGD ++
Sbjct: 799 EEGLLTIGLGYGKIKGRRTGFKPYKRCSVEAIDS-RVTNCCSQGEEKGPKRIRLEGDXST 857


>ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]
          Length = 771

 Score =  377 bits (968), Expect(2) = e-113
 Identities = 262/661 (39%), Positives = 329/661 (49%), Gaps = 44/661 (6%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKG+PIGQAIDIEI            
Sbjct: 44   RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGQAIDIEIPPPRPKRKPSNP 103

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPP-GSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNG 1949
               K G  +P  Q  T DGK +    S    +Q++DLEK+ + E P G +   +  E   
Sbjct: 104  YPRKTGVAAPTLQAGTKDGKLLASVSSSHPGKQILDLEKDPLPERPSGDEKPGNENENQD 163

Query: 1948 E-KCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLIN-NETRE--- 1784
            E  C++  T F E P +  +S+N+    +    R    F+EFV   K   N +ET E   
Sbjct: 164  EDNCSEVFTLFQEAPCTSMSSANKNSIPTPVPLRNSCTFREFVPLMKEGSNQDETNESYI 223

Query: 1783 -----------------------------LNASSDVHDR---SHKPDKPDVSEMVQNDSE 1700
                                         L  S   H++   + K D+P  SE   +  +
Sbjct: 224  TVEPKGNQKLDKPDFRQKAQDSGMSKASNLENSHPSHEKLVQAEKTDEPSQSENFGSQPK 283

Query: 1699 NETSAAKNFPRHAPVQILDGSLASCSQGLSSDVSYQEPAFYQMGIPSPSALFSNPTVSTA 1520
            NE  AA+NFPRH PV +LDGSL +C+Q  SS+++Y E   +Q+GI     LF NP  S A
Sbjct: 284  NEMQAAQNFPRHVPVHVLDGSLGTCTQAPSSEMTYGESLVHQIGIHGHPNLFQNPAASAA 343

Query: 1519 VESQTSTSRSNDHHPMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXX 1340
             E Q + SRS+ H   FP  H PF  +   Q+DY           S+IVS LLQNP    
Sbjct: 344  TEHQNNGSRSSIHQ-SFPTFHTPFGPIRSNQDDYRSFLQISSTFSSLIVSTLLQNPAAHA 402

Query: 1339 XXXXXXXFWPGPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLL 1160
                   FWP  NME +A SP+G  GGFP R I                     A HG+L
Sbjct: 403  AASFAATFWPCSNMEASADSPSGTIGGFPARQINPAPSMAAIAAATVAAATAWWAAHGVL 462

Query: 1159 PL*APPHAGFSC-PPNPTTTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQP 983
            PL AP H GF+C P + T+ P  N  QAP A+ ER EN   TP+ Q  + + E SEALQ 
Sbjct: 463  PLCAPLHTGFTCAPASATSVPPTNTGQAPAANTERREN---TPQDQ--QLDLECSEALQA 517

Query: 982  QHXXXXXXXXXXXXXXXXXXXNLDLEVEASNKEKKVLPSLXXXXXXXXXXXXXXXXXXXX 803
            QH                     + E  A + EK    ++                    
Sbjct: 518  QHSASKSPAMSSSDSEESGGAKPNTESTAPDNEKNT-TAVTELNDPTKMKSRKQVDRSSC 576

Query: 802  XSNTPSGSDVKTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS----EVSEGGR 635
             SNTPS S+V+TDAL K+E+ +EE KE D  +A  E N+RR R  S L+    EVSE GR
Sbjct: 577  GSNTPSSSEVETDALEKHENGEEECKEADVNQAAGEANNRRCRSTSILNESWKEVSEEGR 636

Query: 634  LAFQALFSREVLPQSFSPPQYGPDKKQEMNDNAEGNRQNAAESNFASQLDLKN-TWESCS 458
            LAF+ALFSREVLPQSFSPP    +K  +  D  E  +    +   A QLDL +  W  CS
Sbjct: 637  LAFRALFSREVLPQSFSPPHDLKNKGLQNKDFIENEQGGDEKHENALQLDLNSKAWGPCS 696

Query: 457  S 455
            S
Sbjct: 697  S 697



 Score = 61.2 bits (147), Expect(2) = e-113
 Identities = 32/60 (53%), Positives = 42/60 (70%)
 Frame = -3

Query: 410 KDGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAAS 231
           ++G+L       K+K  RTGFKPYKRCSVEA +S RVTN  +  +EK  KR+RLEGD ++
Sbjct: 713 EEGLLTIGLGYGKIKGRRTGFKPYKRCSVEAIDS-RVTNCCSQGEEKGPKRIRLEGDVST 771


>gb|EOX95552.1| Homeodomain-like superfamily protein isoform 1 [Theobroma cacao]
            gi|508703666|gb|EOX95562.1| Homeodomain-like superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508703667|gb|EOX95563.1| Homeodomain-like superfamily
            protein isoform 1 [Theobroma cacao]
          Length = 739

 Score =  355 bits (911), Expect(2) = e-108
 Identities = 243/628 (38%), Positives = 322/628 (51%), Gaps = 12/628 (1%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEAL KG+PIGQA+DIEI            
Sbjct: 44   RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNP 103

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNGE 1946
               K G  +  +QV   DGK   P S    +QV+DLEKE + E P G +   ++K+   +
Sbjct: 104  YPRKTGA-ATTAQVGAKDGKSETPLSSLRCKQVLDLEKEPLPERPNGDEKPINLKDNQDD 162

Query: 1945 KCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLI----NNETRELN 1778
             C++ +T  +E   S  +S N+    +  + R    F+EFV + K  I     ++   L+
Sbjct: 163  SCSEVVTLLHEANCSSVSSVNKNSIPTSAALRNSCTFREFVPSLKETIQDNGTSKASNLD 222

Query: 1777 ASSDVHDRSHKPDKPDVSEMVQNDSENETSAAKNFPRHAPVQILDGSLASCSQGLSSDVS 1598
             S   H+++ +  K D  ++      +ET A +N+PRH  V +LDGSL + +Q  S D+ 
Sbjct: 223  NSCTSHEKAAQGQKKD--DVDGGLRADETQATQNYPRHVAVHVLDGSLGTGAQNPSLDMP 280

Query: 1597 YQEPAFYQMG-IPSPSALFSNPTVSTAVESQTSTSRSNDHHPMFPNSHLPFNQLPHTQED 1421
            +Q+  F+ MG +   + LF+NP  S   E Q +  RS   H  FP  H PF  +    ED
Sbjct: 281  FQDSVFHPMGDVHGQTNLFANPAASATTEHQNNAPRST--HQAFPTFHPPFTHVCPNPED 338

Query: 1420 YXXXXXXXXXXXSMIVSALLQNPXXXXXXXXXXXFWPGPNMENTAHSPTGLGGGFPPRPI 1241
            Y           S+I S LLQNP           FWP  N++++A SP    GGFP R +
Sbjct: 339  YRSFLHVSSTFSSLIASTLLQNPAAHAAASFAATFWPYANVDSSADSPACSQGGFPSRQM 398

Query: 1240 GXXXXXXXXXXXXXXXXXXXXATHGLLPL*APPHAGFSCP-PNPTTTPSANFTQAPVASE 1064
                                 A HGLLPL AP H GF+C   +    P  +  QAP    
Sbjct: 399  NPAPSMAAIAAATVAAATAWWAAHGLLPLCAPLHTGFTCALASAAAVPPMDNEQAPATKM 458

Query: 1063 EREENNFQTPESQVEKPNQELSEALQPQHXXXXXXXXXXXXXXXXXXXNLDLEVEASNKE 884
            ER++NN Q    Q ++ + E SEALQ QH                    ++  V+A++ E
Sbjct: 459  ERKDNNDQDLSMQDQQLDPEYSEALQAQHSASKSPTSSSSDSEACGDAKVNTGVKAADDE 518

Query: 883  KKVLPSLXXXXXXXXXXXXXXXXXXXXXSNTPSGSDVKTDALGKNEDEKEEVKETDATRA 704
            K    ++                     SNTPS S+V+TD L K E +KE+ K  DA   
Sbjct: 519  KAA--AVTEPQDANKTKNRKQVDRSSCGSNTPSSSEVETDVLEKYEKDKEDAKGADANHP 576

Query: 703  TSEPNSRRNRIASNLS----EVSEGGRLAFQALFSREVLPQSFSPPQYGPDKKQEMNDNA 536
              E  +RR R  SN S    EVSEGGRLAFQALFSREVLPQSFSPP  G +K Q+  D  
Sbjct: 577  QVECCNRRGRSCSNPSDSWKEVSEGGRLAFQALFSREVLPQSFSPPHDGKNKGQQ-KDKV 635

Query: 535  EGNRQNAAESNFA-SQLDLKN-TWESCS 458
            E ++QN+ E + A S LDL + T  SCS
Sbjct: 636  EDDKQNSDEKDGATSALDLNSQTVRSCS 663



 Score = 68.2 bits (165), Expect(2) = e-108
 Identities = 33/59 (55%), Positives = 44/59 (74%)
 Frame = -3

Query: 407 DGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAAS 231
           +G+L    E  KLK  RTGFKPYKRCSVEA+E N+V N+ +  +EK  KR+RLEG+A++
Sbjct: 682 EGLLTIGLEHAKLKARRTGFKPYKRCSVEAKE-NKVMNAGSQGEEKGPKRIRLEGEAST 739


>ref|XP_006491389.1| PREDICTED: protein LHY-like isoform X1 [Citrus sinensis]
            gi|568876654|ref|XP_006491390.1| PREDICTED: protein
            LHY-like isoform X2 [Citrus sinensis]
            gi|568876656|ref|XP_006491391.1| PREDICTED: protein
            LHY-like isoform X3 [Citrus sinensis]
            gi|568876658|ref|XP_006491392.1| PREDICTED: protein
            LHY-like isoform X4 [Citrus sinensis]
          Length = 765

 Score =  347 bits (889), Expect(2) = e-105
 Identities = 249/657 (37%), Positives = 325/657 (49%), Gaps = 42/657 (6%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTK AVQIRSHAQKFFSKLEKEAL KG+PIGQAIDI+I            
Sbjct: 44   RAWQRIEEHIGTKKAVQIRSHAQKFFSKLEKEALSKGVPIGQAIDIDIPPPRPKRKPRNP 103

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNGE 1946
               K  TN+P SQ+   DGK     S     QV+DLEKE + + P G +  +   E+  +
Sbjct: 104  YPRKTCTNAPMSQIGAKDGKLRSSVSSLRCNQVLDLEKEPISDRPNGDEKPTYTIESQKD 163

Query: 1945 KCTKSLTCFNEVP-SSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLIN-NETRELNAS 1772
             C++      E   SS+ + +   M T VG  R   N +EFV + K ++N +ETRE   +
Sbjct: 164  NCSEVFILHQEAHCSSVSSVNKNSMPTPVG-LRDSCNLREFVPSLKEVVNQDETRESYVT 222

Query: 1771 SDVHDRSHKPDKPDVSEMVQNDSEN-------------------------------ETSA 1685
             ++   + K  KPD    +Q++  +                               E  A
Sbjct: 223  VELK-ANEKFGKPDAKLALQDNGSSKPLNLENACPSHEKSVHGEKRDDVADALPTAEVQA 281

Query: 1684 AKNFPRHAPVQILDGSLASCSQGLSSDVSYQEPAFYQMG-IPSPSALFSNPTVSTAVESQ 1508
             +N+PRH  V ILDGSL + +Q   SD+  QE  F+ +G +     LF+NP  S   E++
Sbjct: 282  TQNYPRHVNVHILDGSLGTGTQS-PSDMPMQESIFHPIGEVHGNPNLFTNPAASATTENE 340

Query: 1507 TSTSRSNDHHPMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXXXXXX 1328
            ++  +S   H  FP  H PF Q  H Q+DY           S+IVS LLQNP        
Sbjct: 341  SNVPKST--HQSFPTFHPPFTQFRHDQDDYRSFLHISSAFSSLIVSTLLQNPAAHAAASF 398

Query: 1327 XXXFWPGPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLLPL*A 1148
               FWP  NME +A SPT   GGF  R +                     A HGLLPL A
Sbjct: 399  AATFWPYTNMETSADSPTCPQGGFLSRQMSSPPSMAAIAAATVAAATAWWAAHGLLPLCA 458

Query: 1147 PPHAGFSCPPN-PTTTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQPQHXX 971
            P HA F CPP   T   S +  Q P A  ++ +N    P  +  +P+ E SEALQ Q+  
Sbjct: 459  PFHAPFICPPACATAVSSMDTAQVPAAKTDKNDNTPPNPALKDHQPDLEYSEALQAQNSA 518

Query: 970  XXXXXXXXXXXXXXXXXNLDLEVEASNKEKKVLPSLXXXXXXXXXXXXXXXXXXXXXSNT 791
                              L +E++A++ EK                           SNT
Sbjct: 519  SKSLTVLTSDSEESASAKLKMELKATDHEKN--SEENELHDSNKTKNRKQVDRSSCGSNT 576

Query: 790  PSGSDVKTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS----EVSEGGRLAFQ 623
            PS S+V+TDAL K E  KEE KE D +   ++P +RR+R +SN++    EVSE GRLAFQ
Sbjct: 577  PSSSEVETDALEKQEKGKEESKEIDPSLPATDPGNRRSRSSSNITDSWKEVSEVGRLAFQ 636

Query: 622  ALFSREVLPQSFSPPQYGPDKKQEMN--DNAEGNRQNAAESNFASQLDLKN-TWESC 461
            ALFSREVLPQSFSPP    DK Q+ N  D   GN+++  +S F    DL + TW SC
Sbjct: 637  ALFSREVLPQSFSPPHDLKDKMQQDNVEDKQNGNKKDGDKSLF----DLNSKTWGSC 689



 Score = 65.5 bits (158), Expect(2) = e-105
 Identities = 31/55 (56%), Positives = 39/55 (70%)
 Frame = -3

Query: 407 DGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEG 243
           +G+L       KLK  RTGFKPYKRCSVEA+E NR+ N+    +EKC KR+R+EG
Sbjct: 709 EGLLTIGLGHGKLKARRTGFKPYKRCSVEAKE-NRILNTGNQAEEKCPKRIRVEG 762


>ref|XP_006444706.1| hypothetical protein CICLE_v10018964mg [Citrus clementina]
            gi|567904438|ref|XP_006444707.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|567904440|ref|XP_006444708.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|567904442|ref|XP_006444709.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|567904444|ref|XP_006444710.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546968|gb|ESR57946.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546969|gb|ESR57947.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546970|gb|ESR57948.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546971|gb|ESR57949.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546972|gb|ESR57950.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
          Length = 765

 Score =  347 bits (889), Expect(2) = e-105
 Identities = 248/657 (37%), Positives = 325/657 (49%), Gaps = 42/657 (6%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTK AVQIRSHAQKFFSKLEKEAL KG+PIGQAIDI+I            
Sbjct: 44   RAWQRIEEHIGTKKAVQIRSHAQKFFSKLEKEALSKGVPIGQAIDIDIPPPRPKRKPRNP 103

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNGE 1946
               K  TN+P SQ+   DGK     S     QV+DLEKE + + P G +  +   E+  +
Sbjct: 104  YPRKTCTNAPMSQIGAKDGKLRSSVSSLRCNQVLDLEKEPICDRPNGDEKPTYTIESQKD 163

Query: 1945 KCTKSLTCFNEVP-SSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLIN-NETRELNAS 1772
             C++      E   SS+ + +   M T VG  R   N +EFV + K ++N +ETRE   +
Sbjct: 164  NCSEVFILHQEAHCSSVSSVNKNSMPTPVG-LRDSCNLREFVPSLKEVVNQDETRESYVT 222

Query: 1771 SDVHDRSHKPDKPDVSEMVQNDSEN-------------------------------ETSA 1685
             ++   + K  KPD    +Q++  +                               E  A
Sbjct: 223  VELK-ANEKFGKPDAKLALQDNGSSKPLNLENACPSHEKSVHGEKRDDVADALPTAEVQA 281

Query: 1684 AKNFPRHAPVQILDGSLASCSQGLSSDVSYQEPAFYQMG-IPSPSALFSNPTVSTAVESQ 1508
             +N+PRH  V ILDGSL + +Q   SD+  QE  F+ +G +     LF+NP  S   E++
Sbjct: 282  TQNYPRHVNVHILDGSLGTGTQS-PSDMPMQESIFHPIGEVHGNPNLFTNPAASATTENE 340

Query: 1507 TSTSRSNDHHPMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXXXXXX 1328
            ++  +S   H  FP  H PF Q  H Q+DY           S+IVS LLQNP        
Sbjct: 341  SNVPKST--HQSFPTFHPPFTQFRHDQDDYRSFLHISSAFSSLIVSTLLQNPAAHAAASF 398

Query: 1327 XXXFWPGPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLLPL*A 1148
               FWP  NME +A SPT   GGF  R +                     A HGLLPL A
Sbjct: 399  AATFWPYTNMETSADSPTCPQGGFLSRQMSSPPSMAAIAAATVAAATAWWAAHGLLPLCA 458

Query: 1147 PPHAGFSCPPN-PTTTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQPQHXX 971
            P H  F+CPP   T   S +  Q P A  ++ +N    P  +  +P+ E SEALQ Q+  
Sbjct: 459  PFHTPFTCPPACATAVSSMDTAQVPAAKTDKNDNTPPNPALKDHQPDLEYSEALQAQNSA 518

Query: 970  XXXXXXXXXXXXXXXXXNLDLEVEASNKEKKVLPSLXXXXXXXXXXXXXXXXXXXXXSNT 791
                              L +E++A++ EK                           SNT
Sbjct: 519  SKSLTVLTSDSEESASAKLKMELKATDHEKN--SEENELHDSNKTKNRKQVDRSSCGSNT 576

Query: 790  PSGSDVKTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS----EVSEGGRLAFQ 623
            PS S+V+TDAL K E  KEE KE D +   ++P +RR+R +SN++    EVSE GRLAFQ
Sbjct: 577  PSSSEVETDALEKQEKGKEESKEIDPSLPATDPGNRRSRSSSNITDSWKEVSEVGRLAFQ 636

Query: 622  ALFSREVLPQSFSPPQYGPDKKQEMN--DNAEGNRQNAAESNFASQLDLKN-TWESC 461
            ALFSREVLPQSFSPP    DK Q+ N  D   GN+++  +S F    DL + TW SC
Sbjct: 637  ALFSREVLPQSFSPPHDLKDKMQQDNVEDKQNGNKKDGDKSLF----DLNSKTWGSC 689



 Score = 65.5 bits (158), Expect(2) = e-105
 Identities = 31/55 (56%), Positives = 39/55 (70%)
 Frame = -3

Query: 407 DGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEG 243
           +G+L       KLK  RTGFKPYKRCSVEA+E NR+ N+    +EKC KR+R+EG
Sbjct: 709 EGLLTIGLGHGKLKARRTGFKPYKRCSVEAKE-NRILNTGNQAEEKCPKRIRVEG 762


>gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]
          Length = 768

 Score =  342 bits (877), Expect(2) = e-104
 Identities = 247/663 (37%), Positives = 322/663 (48%), Gaps = 47/663 (7%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKG+PIGQA+DI+I            
Sbjct: 44   RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNP 103

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNGE 1946
               K     P SQV T DGK     S    +Q +DLEKE + E+P G +   + K+   +
Sbjct: 104  YPRKTSIGVPTSQVGTKDGKLFTSASSSDCKQALDLEKEPLPEKPNGDEKPENAKDNQDD 163

Query: 1945 KCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFV-STKKPLINNETRELNASS 1769
             C++  T   EV  S  +S+N+    +  + R L+  +EFV S K+ +  +ET E   + 
Sbjct: 164  NCSEVFTLHQEVHCSSVSSANRSSVPTPVALRNLNTLREFVPSMKRSITQDETNESYVTI 223

Query: 1768 DVHDRSHKPDKPDVSEMVQNDSEN-------------------------------ETSAA 1682
            ++   + K +K D  + +Q+   +                               E  A 
Sbjct: 224  ELKG-NQKLEKADAKQTIQDTGTSNGSKLGNHNVLHEKPIQGDKTQDLNCALPMDEMQAT 282

Query: 1681 KNFPRHAPVQILDGSLASCSQGLSSDVSYQEPAFYQMG-IPSPSALFSNPTVSTAVESQT 1505
            +N+PRH PVQ++DGSL +C+Q  SSD+S+Q+  F+ MG +      F+NP  S   E Q 
Sbjct: 283  QNYPRHVPVQVVDGSLGTCTQTPSSDMSFQDSIFHPMGEVHRHHNPFTNPAASATTEHQN 342

Query: 1504 STSRSNDHHPMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXXXXXXX 1325
            +  RS +    FP  H PF  + H Q+DY           S+IVS L+QNP         
Sbjct: 343  NVPRSVNQS--FPAFHPPFTPIRHNQDDYQSFLHMSSTFSSLIVSTLMQNPAAHAAASFA 400

Query: 1324 XXFWPGPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLLPL*AP 1145
               WP  N+E +A SP    G FPPR +G                    A HGL+PL AP
Sbjct: 401  ATVWPYANVEASADSPASTQGVFPPRQMGSTPSMAAIAAATVAAATAWWAAHGLVPLCAP 460

Query: 1144 PHAGFSCPPNPT-TTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQPQHXXX 968
                F+C P  T   P  +  QAP A  E E N  QTP  Q   P  E SEA+Q QH   
Sbjct: 461  LPTAFTCNPASTAAVPPTDSGQAPAAKTEGEVNTLQTPPLQQLDP--EYSEAVQAQHSDS 518

Query: 967  XXXXXXXXXXXXXXXXNLDLEVEASNKEKKVLPSLXXXXXXXXXXXXXXXXXXXXXSNTP 788
                             L+   +A++ E  V  +                      SNT 
Sbjct: 519  KLPIPSSSDSEESGGAKLNSGPKATDHENAV--TATELHDSNKTKGRKQVDRSSCGSNTA 576

Query: 787  SGSDVKTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS---------EVSEGGR 635
            S SD +TDAL K E  KEE KE DA  + ++ ++RR   +S+ S          VSE GR
Sbjct: 577  SSSDRETDALEKQEMGKEEPKEPDANHSAADTSNRRCCSSSSRSFSYMNDSWKSVSEEGR 636

Query: 634  LAFQALFSREVLPQSFSPPQYGPDKKQEMN--DNAEGNRQNAAESN-FASQLDLKNTWE- 467
            LAFQALFSREVLPQSFSPP    D K   N  DN   ++QNA E++  AS LDL +    
Sbjct: 637  LAFQALFSREVLPQSFSPPH---DLKNMGNQKDNTTDDKQNANENDGNASLLDLNSQKSG 693

Query: 466  SCS 458
            SCS
Sbjct: 694  SCS 696



 Score = 65.9 bits (159), Expect(2) = e-104
 Identities = 34/58 (58%), Positives = 42/58 (72%)
 Frame = -3

Query: 407 DGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAA 234
           +G+L       KLK  RTGFKPYKRCSVEA+E NRV N+S   +EK  KR+RLEG+A+
Sbjct: 711 EGLLTIGLAYGKLKARRTGFKPYKRCSVEAKE-NRVANASGQGEEKGPKRIRLEGEAS 767


>gb|EMJ20128.1| hypothetical protein PRUPE_ppa001765mg [Prunus persica]
          Length = 768

 Score =  342 bits (877), Expect(2) = e-103
 Identities = 244/653 (37%), Positives = 319/653 (48%), Gaps = 41/653 (6%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEA  KG+  GQ+IDI+I            
Sbjct: 44   RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEAHNKGVLAGQSIDIDIPPPRPKRKPSNP 103

Query: 2125 XXXKIGTNSP---NSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKET 1955
               K  + +P    S V   DGK +   S    +QV+DLEKE + E P   +   + KE 
Sbjct: 104  YPRKSCSAAPTWATSHVAAKDGKLLSSTSSSHCKQVLDLEKEPLDERPTKEENPRNGKEN 163

Query: 1954 NGEKCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLINNE------ 1793
              E C++ LT   E   S  +S+N+    +  + R    F+EFV + K +I+ +      
Sbjct: 164  QDENCSEVLTMLLEDHCSSVSSANKNSIPTQVALRNACTFREFVPSPKEVISQDVTNDSY 223

Query: 1792 -TRELNASSDVHDRSHKPDKPDVSEMVQNDSENETS------------------------ 1688
             T ELN + ++     K    D      ++SEN  +                        
Sbjct: 224  VTTELNGNQNLKKNDAKKIVQDNGTSGASESENSNAFHKKLVQGEKADDLNCALPTDGMQ 283

Query: 1687 AAKNFPRHAPVQILDGSLASCSQGLSSDVSYQEPAFYQMG-IPSPSALFSNPTVSTAVES 1511
              + +PR+ PV +LDGSL +C+Q   +D+S+ + AF+ MG +     LF+NPT ST  E 
Sbjct: 284  GTQTYPRNVPVHVLDGSLGACNQITPADMSFADTAFHPMGKVHGQPNLFANPTASTTTEH 343

Query: 1510 QTSTSRSNDHHPMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXXXXX 1331
            +++TSRS+ H   FP  H PF  L H Q+DY           S+IVS+LLQNP       
Sbjct: 344  ESNTSRSSVHQ-SFPAFHPPFTPLHHGQKDYQSFLHMSSTFSSLIVSSLLQNPAAHAAAS 402

Query: 1330 XXXXFWPGPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLLPL* 1151
                FWP  N ENT  SP    GGFP R +                     A+HGLLPL 
Sbjct: 403  FAATFWPYANAENTEDSPACPPGGFPSRQMNSPPSMAAIAAATVAAASAWWASHGLLPLC 462

Query: 1150 APPHAGFSCPP-NPTTTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQPQHX 974
            AP    FSCPP + T  PS +  +AP A+ ER EN+ Q P  Q ++ + E  EA++ QH 
Sbjct: 463  APVQTAFSCPPVSMTGVPSMDTGEAPAANIERGENSLQIPSLQDQQVDPEHLEAVEAQHP 522

Query: 973  XXXXXXXXXXXXXXXXXXNLDLEVEASNKEKKVLPSLXXXXXXXXXXXXXXXXXXXXXSN 794
                                 +   A+  ++KV+ S                      SN
Sbjct: 523  ASKSPSMSSSHSDNGGAEPNTVLKAAA--DEKVVASTDEVNDSNNAKSRKQVDRSSCGSN 580

Query: 793  TPSGSDVKTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS----EVSEGGRLAF 626
            TPS S+V+TDAL K E  KEE+KE D     S+   RR+R   N+S    EVSE GR+AF
Sbjct: 581  TPSSSEVETDALEKQEKGKEELKEPDLNHPASDSTYRRSRSIINISDPWKEVSEEGRMAF 640

Query: 625  QALFSREVLPQSFSPPQYGPDKKQEMNDNAEGNRQNAAESNFASQLDL-KNTW 470
            QALFSREVLPQSFSP    P K +E     EG      +   AS LDL K TW
Sbjct: 641  QALFSREVLPQSFSP----PPKDKEHQTTTEGKENAEEKDEDASLLDLNKKTW 689



 Score = 64.3 bits (155), Expect(2) = e-103
 Identities = 34/57 (59%), Positives = 40/57 (70%)
 Frame = -3

Query: 407 DGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDA 237
           +G+L     Q KLK  RTGFKPYKRCSVEA E NR  N+ +  +EK  KRLRLEG+A
Sbjct: 711 EGLLTIGLSQGKLKARRTGFKPYKRCSVEANE-NRAANAISHCEEKGPKRLRLEGEA 766


>ref|XP_002515093.1| conserved hypothetical protein [Ricinus communis]
            gi|223545573|gb|EEF47077.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 768

 Score =  335 bits (860), Expect(2) = e-101
 Identities = 231/639 (36%), Positives = 312/639 (48%), Gaps = 38/639 (5%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEA+ KG+PIGQA+DI+I            
Sbjct: 45   RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEAIAKGVPIGQALDIDIPPPRPKRKPSNP 104

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNGE 1946
               K G     SQV   DGK     S     QV+DLEKE + E   GH+ ++   E  G+
Sbjct: 105  YPRKTGAGPTPSQVAAKDGKLPSLVSFPRCTQVLDLEKEPLPERLNGHEKQTDATENQGD 164

Query: 1945 KCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLINNETRELNASSD 1766
             C++  T   E   S  +S+N+    +  + +   +F+EFV + K ++N +    +  + 
Sbjct: 165  NCSEVFTLLQEAHCSSVSSANKNSVVTAEALKNSCSFREFVPSLKKVVNQDATNESYVTI 224

Query: 1765 VHDRSHKPDKPDVSEMVQNDSENETSAAKN------------------------------ 1676
              + + K DKPD  + VQ++  ++ S +++                              
Sbjct: 225  ELEGNQKLDKPDAKQTVQDNGSSKASKSESCLFHEKFDQAKKSDEFNSALPTDEMETMQG 284

Query: 1675 FPRHAPVQILDGSLASCSQGLSSDVSYQEPAFYQMG-IPSPSALFSNPTVSTAVESQTST 1499
            +PRH PV +L+GSL +C Q  +SDVS+QEP F   G +     L+S+P  S   E Q + 
Sbjct: 285  YPRHVPVHVLEGSLGTCMQTPTSDVSFQEPIFCPTGEVHGHPNLYSHPAASATTEHQNTA 344

Query: 1498 SRSNDHH--PMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXXXXXXX 1325
             RS+ H   P FP    PFN   H Q+DY           S+IVS LLQNP         
Sbjct: 345  PRSSTHQSFPSFP----PFNSTQHNQDDYRSFLHISSTFSSLIVSTLLQNPAAHSAASFA 400

Query: 1324 XXFWPGPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLLPL*AP 1145
              FWP  N+E++A SP    GGFP R +                     A HGLLPL AP
Sbjct: 401  ATFWPYANLESSADSPICPQGGFPSRQMNSAPSMAAIAAATVAAATAWWAAHGLLPLCAP 460

Query: 1144 PHAGFSCPP-NPTTTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQPQHXXX 968
             HA F+CPP + T   S    Q P A  ER +   + P  Q ++ + E S+ LQ Q+   
Sbjct: 461  LHAAFTCPPASGTAVASTGAGQVPAAKTER-KLTVENPLLQNQQFDVEHSKVLQAQNSAS 519

Query: 967  XXXXXXXXXXXXXXXXNLDLEVEASNKEKKVLPSLXXXXXXXXXXXXXXXXXXXXXSNTP 788
                              +   +A++ E  +                         SNT 
Sbjct: 520  KSLEMSLSDSEESGGPKKNTGSKATDHE--MATPAPEVQDPSKAKARKPADRSSCGSNTS 577

Query: 787  SGSDVKTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS----EVSEGGRLAFQA 620
            S S+V+TDAL K E   EE+KETD     +E + RR+R  S++S    EVSE GRLAFQA
Sbjct: 578  SSSEVETDALEKLEKGNEELKETDTNPEPTESSCRRSRSNSSISDSWKEVSEEGRLAFQA 637

Query: 619  LFSREVLPQSFSPPQYGPDKKQEMNDNAEGNRQNAAESN 503
            LFSREVLPQSFSPP    ++ ++  D  E ++QN  E N
Sbjct: 638  LFSREVLPQSFSPPHVLKNEARQ-KDEIEEDKQNTVEKN 675



 Score = 63.9 bits (154), Expect(2) = e-101
 Identities = 32/60 (53%), Positives = 43/60 (71%)
 Frame = -3

Query: 410 KDGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAAS 231
           +DG+L F     KLK  RTGFKPYKRCSVEA+E NR+  + +  +EK  KR+R+EG A++
Sbjct: 710 EDGLLTFGLGHGKLKARRTGFKPYKRCSVEAKE-NRMLTAGSQGEEKGPKRIRVEGKAST 768


>dbj|BAH09383.1| transcription factor LHY [Populus nigra] gi|219687749|dbj|BAH09385.1|
            PnLHY2 [Populus nigra]
          Length = 764

 Score =  333 bits (853), Expect(2) = e-100
 Identities = 236/656 (35%), Positives = 323/656 (49%), Gaps = 40/656 (6%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKT VQIRSHAQKFFSKLEKEA+VKG+PIGQA+DI+I            
Sbjct: 44   RAWQRIEEHIGTKTVVQIRSHAQKFFSKLEKEAIVKGVPIGQALDIDIPPPRPKRKPSNP 103

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNGE 1946
               KIG   P SQV   DGK +   S    +QV+ LEKE + E+  G++  +  KE   +
Sbjct: 104  YPRKIGVGPPASQVGAKDGKLLTSASFPCCKQVLGLEKEPLPEKLNGNERPTDAKENQDD 163

Query: 1945 KCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLINNETRELNASSD 1766
             C++  +   E   S   S N+    ++   +K S F+EFVS+ K   ++ + + + + D
Sbjct: 164  NCSEVFSLLQEPHCSSVPSVNKNSVPTLDILKKASPFREFVSSPKEGNHDASNQSSVTVD 223

Query: 1765 VHDRSHKPDKPDVSEMVQNDSENETSAAKNF----------------------------- 1673
            +        K D S++ Q++S +E S ++NF                             
Sbjct: 224  LGANQ----KLDNSDVKQDNSTSEFSKSENFCSFSEKLFQQKKSDDFIGALRTDGMQAMQ 279

Query: 1672 --PRHAPVQILDGSLASCSQGLSSDVSYQEPAFYQMG-IPSPSALFSNPTVSTAVESQTS 1502
              PRH PV +LDGSL +C Q   SD S+QE  F+ +G IP+   L+S+P  S   +    
Sbjct: 280  NYPRHVPVHVLDGSLGTCMQTPPSDFSFQESIFHPIGEIPACPNLYSHPAASKTTDHPNI 339

Query: 1501 TSRSNDHHPMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXXXXXXXX 1322
            + RS+ H   FP+   PF    H Q+DY           S++VS+LLQNP          
Sbjct: 340  SPRSSMHQS-FPSFPPPFTPTHHNQDDYRSFLHMSSTFSSLVVSSLLQNPAAHAAASFAS 398

Query: 1321 XFWPGPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLLPL*APP 1142
             FWP  N+E++A SP    GGF  R +                       HGLLP+ AP 
Sbjct: 399  TFWPYGNVESSADSPACAQGGFQSRQLNSAPSMAAIVAATVAAATAWWTAHGLLPMCAPL 458

Query: 1141 HAGFSCPP-NPTTTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQPQHXXXX 965
            H  F+CPP + T   S +  Q      ER+E   + P  Q +  +QE +EALQ Q+    
Sbjct: 459  HTSFACPPASATAIQSVDTGQVSATKTERKE-TAENPSLQGQIQDQEHTEALQAQNSASK 517

Query: 964  XXXXXXXXXXXXXXXNLDLEVEASNKEKKVLPSLXXXXXXXXXXXXXXXXXXXXXSNTPS 785
                            L+   E  + E    P                       SNTPS
Sbjct: 518  SPKITSSDSEESGGPQLNTRPEVIDHELTTKP--HEVQDSSKTKSRKLIDRSSCGSNTPS 575

Query: 784  GSDVKTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS----EVSEGGRLAFQAL 617
             S+++TDAL K E   EE KE DA    SE +SR +R +S+++    EVSE GRLAFQ L
Sbjct: 576  SSEIETDALEKAEKGTEEPKEDDANHPASESSSRHSRSSSSMNDSWKEVSEEGRLAFQTL 635

Query: 616  FSREVLPQSFSPPQYGPDKKQEMNDNAE-GNRQNAAESN-FASQLDLK-NTWESCS 458
            F+REVLPQSFSPP    D K +M+ N + G +++A E +  AS ++L   TWE CS
Sbjct: 636  FAREVLPQSFSPPH---DLKSKMHQNEDAGEKKDADEKDGDASLINLNTKTWECCS 688



 Score = 61.2 bits (147), Expect(2) = e-100
 Identities = 33/59 (55%), Positives = 40/59 (67%)
 Frame = -3

Query: 410 KDGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAA 234
           ++G+L       KLK  RTGFKPYKRCS+EA+ES   T S   E EK  KRLRLEG+A+
Sbjct: 706 EEGLLTIGLGHGKLKVRRTGFKPYKRCSLEAKESRTGTGSGQGE-EKGPKRLRLEGEAS 763


>gb|EOX95556.1| Homeodomain-like superfamily protein isoform 5 [Theobroma cacao]
            gi|508703664|gb|EOX95560.1| Homeodomain-like superfamily
            protein isoform 5 [Theobroma cacao]
            gi|508703665|gb|EOX95561.1| Homeodomain-like superfamily
            protein isoform 5 [Theobroma cacao]
          Length = 707

 Score =  322 bits (824), Expect(2) = 1e-98
 Identities = 232/627 (37%), Positives = 304/627 (48%), Gaps = 11/627 (1%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEAL KG+PIGQA+DIEI            
Sbjct: 44   RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNP 103

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNGE 1946
               K G  +  +QV   DGK   P S    +QV+DLEKE + E P G +   ++K+   +
Sbjct: 104  YPRKTGA-ATTAQVGAKDGKSETPLSSLRCKQVLDLEKEPLPERPNGDEKPINLKDNQDD 162

Query: 1945 KCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLINN----ETRELN 1778
             C++ +T  +E   S  +S N+    +  + R    F+EFV + K  I +    +   L+
Sbjct: 163  SCSEVVTLLHEANCSSVSSVNKNSIPTSAALRNSCTFREFVPSLKETIQDNGTSKASNLD 222

Query: 1777 ASSDVHDRSHKPDKPDVSEMVQNDSENETSAAKNFPRHAPVQILDGSLASCSQGLSSDVS 1598
             S   H+++ +  K D  ++      +ET A +N+PRH  V +LDGSL + +        
Sbjct: 223  NSCTSHEKAAQGQKKD--DVDGGLRADETQATQNYPRHVAVHVLDGSLGTAA-------- 272

Query: 1597 YQEPAFYQMGIPSPSALFSNPTVSTAVESQTSTSRSNDHHPMFPNSHLPFNQLPHTQEDY 1418
                                   S   E Q +  RS   H  FP  H PF  +    EDY
Sbjct: 273  -----------------------SATTEHQNNAPRST--HQAFPTFHPPFTHVCPNPEDY 307

Query: 1417 XXXXXXXXXXXSMIVSALLQNPXXXXXXXXXXXFWPGPNMENTAHSPTGLGGGFPPRPIG 1238
                       S+I S LLQNP           FWP  N++++A SP    GGFP R + 
Sbjct: 308  RSFLHVSSTFSSLIASTLLQNPAAHAAASFAATFWPYANVDSSADSPACSQGGFPSRQMN 367

Query: 1237 XXXXXXXXXXXXXXXXXXXXATHGLLPL*APPHAGFSCP-PNPTTTPSANFTQAPVASEE 1061
                                A HGLLPL AP H GF+C   +    P  +  QAP    E
Sbjct: 368  PAPSMAAIAAATVAAATAWWAAHGLLPLCAPLHTGFTCALASAAAVPPMDNEQAPATKME 427

Query: 1060 REENNFQTPESQVEKPNQELSEALQPQHXXXXXXXXXXXXXXXXXXXNLDLEVEASNKEK 881
            R++NN Q    Q ++ + E SEALQ QH                    ++  V+A++ EK
Sbjct: 428  RKDNNDQDLSMQDQQLDPEYSEALQAQHSASKSPTSSSSDSEACGDAKVNTGVKAADDEK 487

Query: 880  KVLPSLXXXXXXXXXXXXXXXXXXXXXSNTPSGSDVKTDALGKNEDEKEEVKETDATRAT 701
                ++                     SNTPS S+V+TD L K E +KE+ K  DA    
Sbjct: 488  AA--AVTEPQDANKTKNRKQVDRSSCGSNTPSSSEVETDVLEKYEKDKEDAKGADANHPQ 545

Query: 700  SEPNSRRNRIASNLS----EVSEGGRLAFQALFSREVLPQSFSPPQYGPDKKQEMNDNAE 533
             E  +RR R  SN S    EVSEGGRLAFQALFSREVLPQSFSPP  G +K Q+  D  E
Sbjct: 546  VECCNRRGRSCSNPSDSWKEVSEGGRLAFQALFSREVLPQSFSPPHDGKNKGQQ-KDKVE 604

Query: 532  GNRQNAAESNFA-SQLDLKN-TWESCS 458
             ++QN+ E + A S LDL + T  SCS
Sbjct: 605  DDKQNSDEKDGATSALDLNSQTVRSCS 631



 Score = 68.2 bits (165), Expect(2) = 1e-98
 Identities = 33/59 (55%), Positives = 44/59 (74%)
 Frame = -3

Query: 407 DGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAAS 231
           +G+L    E  KLK  RTGFKPYKRCSVEA+E N+V N+ +  +EK  KR+RLEG+A++
Sbjct: 650 EGLLTIGLEHAKLKARRTGFKPYKRCSVEAKE-NKVMNAGSQGEEKGPKRIRLEGEAST 707


>gb|ABK96054.1| unknown [Populus trichocarpa]
          Length = 764

 Score =  329 bits (844), Expect(2) = 3e-98
 Identities = 237/656 (36%), Positives = 319/656 (48%), Gaps = 40/656 (6%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKT VQIRSHAQKFFSKLEKEA+VKG+PIGQA+DI+I            
Sbjct: 44   RAWQRIEEHIGTKTVVQIRSHAQKFFSKLEKEAVVKGVPIGQALDIDIPPPRPKRKPSNP 103

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNGE 1946
               KIG   P SQV   DGK +   S    +QV+ LEKE + E+  G +  ++ KE   +
Sbjct: 104  YPRKIGVGPPASQVGAKDGKLLTSASFPCCKQVLGLEKEPLPEKLNGDERPTNAKENQDD 163

Query: 1945 KCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLINNETRELNASSD 1766
             C++  +   E   S   S N+    ++   +K S F+EFVS+ K        + +  S 
Sbjct: 164  NCSEVFSLLQEPHCSSVPSINKNSVPTLDILKKASPFREFVSSPK----EGNHDASNQSS 219

Query: 1765 VHDRSHKPDKPDVSEMVQNDSENETSAAKNF----------------------------- 1673
            V        K D S++ Q++S +E S ++NF                             
Sbjct: 220  VTVELGANQKLDNSDVKQDNSTSEFSKSENFCSFSEKLFQQKKSDDFIGALRTDGMQAMQ 279

Query: 1672 --PRHAPVQILDGSLASCSQGLSSDVSYQEPAFYQMG-IPSPSALFSNPTVSTAVESQTS 1502
              PRH PV +LDGSL +C Q   SD S+QE  F+ +G IP+   L+S+P  S   +    
Sbjct: 280  NYPRHVPVHVLDGSLGTCMQTPPSDFSFQESMFHPIGEIPACPNLYSHPAASKTTDHPNI 339

Query: 1501 TSRSNDHHPMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXXXXXXXX 1322
            + RS+ H   FP+   PF    H Q+DY           S++VS+LLQNP          
Sbjct: 340  SPRSSMHQS-FPSFPPPFTPTHHNQDDYRSFLHISSTFSSLVVSSLLQNPAAHAAASFAS 398

Query: 1321 XFWPGPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLLPL*APP 1142
             FWP  N+E++A SP    GGF  R +                       HGLLP+ AP 
Sbjct: 399  TFWPYGNVESSADSPACAQGGFQSRQLNSAPSMAAIVAATVAAATAWWTAHGLLPMCAPL 458

Query: 1141 HAGFSCPP-NPTTTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQPQHXXXX 965
            H  F+CPP + T   S +  Q      ER+E   + P  Q +    E +EALQ Q+    
Sbjct: 459  HTSFACPPASATAIQSVDTGQVSATKTERKE-TAENPSLQGQIQGPEHTEALQAQNSASK 517

Query: 964  XXXXXXXXXXXXXXXNLDLEVEASNKEKKVLPSLXXXXXXXXXXXXXXXXXXXXXSNTPS 785
                            L+   E  + E    P                       SNTPS
Sbjct: 518  SPKITSSDSEESGGPKLNTGPEVIDHELTTKP--HEVQDSSKTKSRKLIDRSSCGSNTPS 575

Query: 784  GSDVKTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS----EVSEGGRLAFQAL 617
             S+++TDAL K E   EE KE DA    SE +SR +R +S+++    EVSE GRLAFQAL
Sbjct: 576  SSEIETDALEKAEKGTEEPKEDDANHPASESSSRHSRSSSSMNDSWKEVSEEGRLAFQAL 635

Query: 616  FSREVLPQSFSPPQYGPDKKQEMNDNAE-GNRQNAAESN-FASQLDLKN-TWESCS 458
            F+REVLPQSFSPP    D K +M+ N + G +++A E +  AS ++L + TWE CS
Sbjct: 636  FAREVLPQSFSPPH---DLKSKMHQNEDAGEKKDADEKDGDASLINLNSKTWECCS 688



 Score = 58.9 bits (141), Expect(2) = 3e-98
 Identities = 31/47 (65%), Positives = 35/47 (74%)
 Frame = -3

Query: 374 KLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAA 234
           KLK  RTGFKPYKRCS+EA+ES   T S   E EK  KRLRLEG+A+
Sbjct: 718 KLKVRRTGFKPYKRCSLEAKESRTGTGSGQGE-EKGPKRLRLEGEAS 763


>gb|EOX95554.1| Homeodomain-like superfamily protein isoform 3 [Theobroma cacao]
            gi|508703662|gb|EOX95558.1| Homeodomain-like superfamily
            protein isoform 3 [Theobroma cacao]
            gi|508703663|gb|EOX95559.1| Homeodomain-like superfamily
            protein isoform 3 [Theobroma cacao]
          Length = 700

 Score =  319 bits (817), Expect(2) = 7e-98
 Identities = 229/628 (36%), Positives = 306/628 (48%), Gaps = 12/628 (1%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEAL KG+PIGQA+DIEI            
Sbjct: 44   RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNP 103

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNGE 1946
               K G  +  +QV   DGK   P S    +QV+DLEKE + E P G +   ++K+   +
Sbjct: 104  YPRKTGA-ATTAQVGAKDGKSETPLSSLRCKQVLDLEKEPLPERPNGDEKPINLKDNQDD 162

Query: 1945 KCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLI----NNETRELN 1778
             C++ +T  +E   S  +S N+    +  + R    F+EFV + K  I     ++   L+
Sbjct: 163  SCSEVVTLLHEANCSSVSSVNKNSIPTSAALRNSCTFREFVPSLKETIQDNGTSKASNLD 222

Query: 1777 ASSDVHDRSHKPDKPDVSEMVQNDSENETSAAKNFPRHAPVQILDGSLASCSQGLSSDVS 1598
             S   H+++ +  K D  ++      +ET A +N+PRH  V +LDGSL + +Q  S D+ 
Sbjct: 223  NSCTSHEKAAQGQKKD--DVDGGLRADETQATQNYPRHVAVHVLDGSLGTGAQNPSLDMP 280

Query: 1597 YQEPAFYQMG-IPSPSALFSNPTVSTAVESQTSTSRSNDHHPMFPNSHLPFNQLPHTQED 1421
            +Q+  F+ MG +   + LF+NP  S   E Q +  RS                       
Sbjct: 281  FQDSVFHPMGDVHGQTNLFANPAASATTEHQNNAPRSTH--------------------- 319

Query: 1420 YXXXXXXXXXXXSMIVSALLQNPXXXXXXXXXXXFWPGPNMENTAHSPTGLGGGFPPRPI 1241
                                QNP           FWP  N++++A SP    GGFP R +
Sbjct: 320  --------------------QNPAAHAAASFAATFWPYANVDSSADSPACSQGGFPSRQM 359

Query: 1240 GXXXXXXXXXXXXXXXXXXXXATHGLLPL*APPHAGFSCP-PNPTTTPSANFTQAPVASE 1064
                                 A HGLLPL AP H GF+C   +    P  +  QAP    
Sbjct: 360  NPAPSMAAIAAATVAAATAWWAAHGLLPLCAPLHTGFTCALASAAAVPPMDNEQAPATKM 419

Query: 1063 EREENNFQTPESQVEKPNQELSEALQPQHXXXXXXXXXXXXXXXXXXXNLDLEVEASNKE 884
            ER++NN Q    Q ++ + E SEALQ QH                    ++  V+A++ E
Sbjct: 420  ERKDNNDQDLSMQDQQLDPEYSEALQAQHSASKSPTSSSSDSEACGDAKVNTGVKAADDE 479

Query: 883  KKVLPSLXXXXXXXXXXXXXXXXXXXXXSNTPSGSDVKTDALGKNEDEKEEVKETDATRA 704
            K    ++                     SNTPS S+V+TD L K E +KE+ K  DA   
Sbjct: 480  KAA--AVTEPQDANKTKNRKQVDRSSCGSNTPSSSEVETDVLEKYEKDKEDAKGADANHP 537

Query: 703  TSEPNSRRNRIASNLS----EVSEGGRLAFQALFSREVLPQSFSPPQYGPDKKQEMNDNA 536
              E  +RR R  SN S    EVSEGGRLAFQALFSREVLPQSFSPP  G +K Q+  D  
Sbjct: 538  QVECCNRRGRSCSNPSDSWKEVSEGGRLAFQALFSREVLPQSFSPPHDGKNKGQQ-KDKV 596

Query: 535  EGNRQNAAESNFA-SQLDLKN-TWESCS 458
            E ++QN+ E + A S LDL + T  SCS
Sbjct: 597  EDDKQNSDEKDGATSALDLNSQTVRSCS 624



 Score = 68.2 bits (165), Expect(2) = 7e-98
 Identities = 33/59 (55%), Positives = 44/59 (74%)
 Frame = -3

Query: 407 DGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAAS 231
           +G+L    E  KLK  RTGFKPYKRCSVEA+E N+V N+ +  +EK  KR+RLEG+A++
Sbjct: 643 EGLLTIGLEHAKLKARRTGFKPYKRCSVEAKE-NKVMNAGSQGEEKGPKRIRLEGEAST 700


>dbj|BAH09382.1| transcription factor LHY [Populus nigra] gi|219687747|dbj|BAH09384.1|
            PnLHY1 [Populus nigra]
          Length = 768

 Score =  333 bits (853), Expect(2) = 1e-97
 Identities = 238/656 (36%), Positives = 319/656 (48%), Gaps = 40/656 (6%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEA+ KG+PIGQA++I+I            
Sbjct: 44   RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEAVAKGVPIGQALEIDIPPPRPKRKPSNP 103

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNGE 1946
               K G   P SQ    DGK +   S     +V+DLEKE   E+P G +  ++ KE   +
Sbjct: 104  YPRKTGVGPPASQAGAKDGKLLTSTSSPHCRKVLDLEKEPRPEKPNGDERPTNAKENQDD 163

Query: 1945 KCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLINNETRELNASSD 1766
             C++  T   E   S  AS N+    ++   +K S+F+EFV + K   ++   E   + +
Sbjct: 164  NCSEVFTLLQEAHCSSVASVNKNCVPALEVLKKTSSFREFVPSPKKGNDDACNESFITVE 223

Query: 1765 VHDRSHKPDKPDVSEMVQND-------SEN------------------------ETSAAK 1679
             H+ + K D  D ++ V ++       SEN                        E  A +
Sbjct: 224  -HEANQKLDSSDANQTVLDNGTVKASKSENSCSLHEILFQQKKSDDFIGSLPTDEMQAMQ 282

Query: 1678 NFPRHAPVQILDGSLASCSQGLSSDVSYQEPAFYQMG-IPSPSALFSNPTVSTAVESQTS 1502
            N+PRH PV +LDGSL +C +   SD+S+Q+  F+ +G IP+   L+S+P  ST  +  T+
Sbjct: 283  NYPRHVPVHVLDGSLGTCIE-TPSDLSFQDSMFHPVGDIPACPILYSHPAGSTTTDHPTN 341

Query: 1501 TSRSNDHH--PMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXXXXXX 1328
              RS+ H   P FP    PF    H Q+DY           S +VS LLQNP        
Sbjct: 342  LPRSSMHQSFPFFPP---PFTPTHHNQDDYRSFLHISSTFSSPVVSTLLQNPAAHAAASF 398

Query: 1327 XXXFWPGPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLLPL*A 1148
               FWP  N+E++A SP     GF    I                     A HGLLP+ A
Sbjct: 399  AATFWPYGNVESSADSPACAQEGFQSGQINSAPSMAAIAAATVAAATAWWAAHGLLPICA 458

Query: 1147 PPHAGFSCPP-NPTTTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQPQHXX 971
            P H  F+CPP + T   SA+  Q P A  ER+E     P  Q +  + E SEA+Q Q+  
Sbjct: 459  PLHTAFACPPASATAIQSADTDQVPPAKPERKETTPDNPPLQGQIQDLEHSEAVQAQNSA 518

Query: 970  XXXXXXXXXXXXXXXXXNLDLEVEASNKEKKVLPSLXXXXXXXXXXXXXXXXXXXXXSNT 791
                              L+   + ++ E  +                         SNT
Sbjct: 519  SKPPTLSSSDSEESGGTKLNTGPKVTDDE--LNSKAPEVQDSGKTKSRKQVDRSSCGSNT 576

Query: 790  PSGSDVKTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS----EVSEGGRLAFQ 623
            PS S+++TDAL K E  KEE KE DA    SE N RR+R +S++S    EVSE GRLAFQ
Sbjct: 577  PSSSEIETDALEKTEKGKEEPKEADANHPASESNCRRSRSSSSMSDSWKEVSEEGRLAFQ 636

Query: 622  ALFSREVLPQSFSPPQYGPDKKQEMNDNAEGNRQNAAESNFASQLDLKN-TWESCS 458
            ALF+RE+LPQSFSPP     K  +  D  E    +  + + AS LDL + TW  CS
Sbjct: 637  ALFTREILPQSFSPPHDLKSKMHQKEDTEEKKNPDEKDGD-ASLLDLNSKTWGYCS 691



 Score = 53.5 bits (127), Expect(2) = 1e-97
 Identities = 29/59 (49%), Positives = 37/59 (62%)
 Frame = -3

Query: 410 KDGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAA 234
           ++G+L        LK + TGFKPYKRCS+EA+ES   T     E EK  KRLRLE +A+
Sbjct: 710 EEGLLTIGLGHGNLKAHLTGFKPYKRCSLEAKESRMATTGGQGE-EKGPKRLRLEREAS 767


>ref|XP_006386663.1| hypothetical protein POPTR_0002s18190g [Populus trichocarpa]
            gi|566158675|ref|XP_006386664.1| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|566158677|ref|XP_002301449.2| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|550345281|gb|ERP64460.1| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|550345282|gb|ERP64461.1| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|550345283|gb|EEE80722.2| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
          Length = 768

 Score =  333 bits (854), Expect(2) = 2e-97
 Identities = 239/656 (36%), Positives = 320/656 (48%), Gaps = 40/656 (6%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEA+ KG+PIG+A++I+I            
Sbjct: 44   RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEAVAKGVPIGKALEIDIPPPRPKRKPSNP 103

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNGE 1946
               K G   P SQ    DGK +   S     +V+DLEKE   E+P G +  ++ KE   +
Sbjct: 104  YPRKTGVGPPASQAGAKDGKLLTSTSSPHCRKVLDLEKEPRPEKPNGDERPTNAKENQDD 163

Query: 1945 KCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLINNETRELNASSD 1766
             C++  T   E   S  AS N+    ++   +K S+F+EFV + K   ++   E   + +
Sbjct: 164  NCSEVFTLLQEAHCSSVASVNKNCVPALEVLKKTSSFREFVPSPKKGNHDACNESFITVE 223

Query: 1765 VHDRSHKPDKPDVSEMVQND-------SEN------------------------ETSAAK 1679
             H+ + K D  D ++ V ++       SEN                        E  A +
Sbjct: 224  -HEANQKLDSSDANQTVLDNGTVKASKSENSCSLHEILFQQKKSDDFIGSLPTDEMKAMQ 282

Query: 1678 NFPRHAPVQILDGSLASCSQGLSSDVSYQEPAFYQMG-IPSPSALFSNPTVSTAVESQTS 1502
            N+PRH PV +LDGSL +C +   SD+S+Q+  F+ +G IP+   L+S+PT ST  +  T+
Sbjct: 283  NYPRHVPVHVLDGSLGTCME-TPSDLSFQDSMFHPVGDIPACPILYSHPTGSTTTDHPTN 341

Query: 1501 TSRSNDHH--PMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXXXXXX 1328
              RS+ H   P FP    PF    H Q+DY           S +VS LLQNP        
Sbjct: 342  LPRSSMHQSFPFFPP---PFTPTHHNQDDYRSFLHISSTFSSPVVSTLLQNPAAHAAASF 398

Query: 1327 XXXFWPGPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLLPL*A 1148
               FWP  N+E++A SP     GF    I                     A HGLLP+ A
Sbjct: 399  AATFWPYGNVESSADSPACAQEGFQSGQINSAPSMAAIAAATVAAATAWWAAHGLLPICA 458

Query: 1147 PPHAGFSCPP-NPTTTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQPQHXX 971
            P H  F+CPP + T   SA+  Q P A  ER+E     P  Q +  + E SEA+Q Q+  
Sbjct: 459  PLHTAFACPPASATAIQSADTDQVPPAKPERKETTPDNPPLQGQIQDLEHSEAVQAQNSA 518

Query: 970  XXXXXXXXXXXXXXXXXNLDLEVEASNKEKKVLPSLXXXXXXXXXXXXXXXXXXXXXSNT 791
                              L+   + ++ E  +                         SNT
Sbjct: 519  SKPPTLSSSDSEESGGTKLNTAPKVTDHE--LNSKAPEVQDSGKTKSRKQVDRSSCGSNT 576

Query: 790  PSGSDVKTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS----EVSEGGRLAFQ 623
            PS S+++TDAL KNE  KEE KE DA    SE N RR+R +S++S    EVSE GRLAFQ
Sbjct: 577  PSSSEIETDALEKNEKGKEEPKEADANHPASELNCRRSRSSSSMSDSWKEVSEEGRLAFQ 636

Query: 622  ALFSREVLPQSFSPPQYGPDKKQEMNDNAEGNRQNAAESNFASQLDLKN-TWESCS 458
            ALF+RE LPQSFSPP     K  +  D  E    +  + + AS LDL + TW  CS
Sbjct: 637  ALFTRERLPQSFSPPHDLKSKMHQKEDTEEKKNPDEKDGD-ASLLDLNSKTWGYCS 691



 Score = 52.4 bits (124), Expect(2) = 2e-97
 Identities = 29/59 (49%), Positives = 37/59 (62%)
 Frame = -3

Query: 410 KDGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAA 234
           ++G+L        LK + TGFKPYKRCS+EA+ES   T     E EK  KRLRLE +A+
Sbjct: 710 EEGLLTIGLGHGNLKAHLTGFKPYKRCSLEAKESRMGTTGGQGE-EKGPKRLRLEREAS 767


>ref|XP_006598673.1| PREDICTED: late elongated hypocotyl and circadian clock
            associated-1-like protein 1 isoform X1 [Glycine max]
            gi|571523805|ref|XP_006598674.1| PREDICTED: late
            elongated hypocotyl and circadian clock associated-1-like
            protein 1 isoform X2 [Glycine max]
            gi|571523809|ref|XP_006598675.1| PREDICTED: late
            elongated hypocotyl and circadian clock associated-1-like
            protein 1 isoform X3 [Glycine max]
            gi|571523813|ref|XP_006598676.1| PREDICTED: late
            elongated hypocotyl and circadian clock associated-1-like
            protein 1 isoform X4 [Glycine max]
            gi|571523816|ref|XP_006598677.1| PREDICTED: late
            elongated hypocotyl and circadian clock associated-1-like
            protein 1 isoform X5 [Glycine max]
            gi|571523820|ref|XP_006598678.1| PREDICTED: late
            elongated hypocotyl and circadian clock associated-1-like
            protein 1 isoform X6 [Glycine max]
          Length = 750

 Score =  301 bits (771), Expect(2) = 2e-91
 Identities = 230/632 (36%), Positives = 303/632 (47%), Gaps = 36/632 (5%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEI--XXXXXXXXXX 2132
            RAWQRIEEHIGTKTAVQIRSHAQKFF+KLEKEALVKG+PIGQA+DI+I            
Sbjct: 44   RAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPNNP 103

Query: 2131 XXXXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETN 1952
                 +IGT S +S  +  DGK     S     Q +DL+KE + E+    +G ++VKE  
Sbjct: 104  YPRKTRIGTTSLHSGAK--DGKLNLVESSH-VNQALDLKKEPLPEKHDLDEGLTTVKENK 160

Query: 1951 GEKCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLI---------- 1802
             E   K  T   EVP S  +S+N+   T          FKE   + K +I          
Sbjct: 161  DENHAKVFTLLQEVPCSSVSSANESSITMSVPLGNPCAFKEITPSVKEVIARDEKTESFV 220

Query: 1801 ----NNETRELNASSDVHDRSHKPDKPDVS----EMVQNDSENETSAA---------KNF 1673
                 N   E+N     +  S      D      ++VQN+  +              +N+
Sbjct: 221  TVEPENGKLEINDGKQTNGTSKDSRLEDSDALHMKLVQNEKPDGLDCELTIDGMQGNQNY 280

Query: 1672 PRHAPVQILDGSLASCSQGLSSDVSYQEPAFYQM-GIPSPSALFSNPTVSTAVESQTSTS 1496
            PRH  V ++DG+L + +Q  S D+ +++  F  + G+     +F+N   S   ESQ +T+
Sbjct: 281  PRHVTVHVVDGNLGTNTQNPSQDMLFRDSMFQPIGGVNGQRNVFTNTAPSNTSESQNNTA 340

Query: 1495 RSNDHHPMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXXXXXXXXXF 1316
            RS+ H    P  + PF Q  H Q+DY           ++IVS L+QNP           F
Sbjct: 341  RSSVHQSFLP--YPPFTQ--HNQDDYQSFLHMSSTFSNLIVSTLMQNPAAHAAASFAATF 396

Query: 1315 WPGPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLLPL*APPHA 1136
            WP  N E +A+SP    GGF  R IG                    A HGLLPL AP H 
Sbjct: 397  WPYANPETSANSPRCSQGGFTNRQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHT 456

Query: 1135 GFSCPPNPTTTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQPQHXXXXXXX 956
             F+CP + TT PS N  +AP    E+E+   Q P  Q +  + E SEA Q QH       
Sbjct: 457  SFACPASVTTVPSMNTGEAPALKAEQEKTTLQNPPLQDQMLDPEYSEAQQAQHSASKSPA 516

Query: 955  XXXXXXXXXXXXNLDLEVEASNK--EKKVLPSLXXXXXXXXXXXXXXXXXXXXXSNTPSG 782
                          D ++  S+K  + +   ++                     SNT S 
Sbjct: 517  AILSDSESG-----DAKLNTSSKVTDHETNKTISEHLDSNKTKGRKPVDRSSCGSNTASS 571

Query: 781  SDVKTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS----EVSEGGRLAFQALF 614
            SDV+TDAL K E  KEE +  DA +   E ++RR R  SNL+    EVSE GRLAFQALF
Sbjct: 572  SDVETDALEKGEKGKEEPEIPDANQLAIEFSNRR-RSVSNLTDSWKEVSEEGRLAFQALF 630

Query: 613  SREVLPQSFSPPQYGPDKKQEMNDNAEGNRQN 518
            SREVLPQSFSPP    +   +M DNA  N+QN
Sbjct: 631  SREVLPQSFSPPHALKNTDHQM-DNANDNKQN 661



 Score = 64.3 bits (155), Expect(2) = 2e-91
 Identities = 33/59 (55%), Positives = 44/59 (74%)
 Frame = -3

Query: 407 DGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAAS 231
           +G+L     Q KLKT+RTGFKPYKRCS+EA+E NRV  SS   +E+  KR+RLEG+ ++
Sbjct: 693 EGLLTIGLGQGKLKTHRTGFKPYKRCSMEAKE-NRVGASSNQGEEQGCKRIRLEGETST 750


>ref|NP_001235187.1| late elongated hypocotyl and circadian clock associated-1-like
            protein 1 [Glycine max] gi|158999368|gb|ABW87008.1| late
            elongated hypocotyl and circadian clock associated-1-like
            protein 1 [Glycine max]
          Length = 749

 Score =  301 bits (771), Expect(2) = 2e-91
 Identities = 230/632 (36%), Positives = 303/632 (47%), Gaps = 36/632 (5%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEI--XXXXXXXXXX 2132
            RAWQRIEEHIGTKTAVQIRSHAQKFF+KLEKEALVKG+PIGQA+DI+I            
Sbjct: 44   RAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPNNP 103

Query: 2131 XXXXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETN 1952
                 +IGT S +S  +  DGK     S     Q +DL+KE + E+    +G ++VKE  
Sbjct: 104  YPRKTRIGTTSLHSGAK--DGKLNLVESSH-VNQALDLKKEPLPEKHDLDEGLTTVKENK 160

Query: 1951 GEKCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLI---------- 1802
             E   K  T   EVP S  +S+N+   T          FKE   + K +I          
Sbjct: 161  DENHAKVFTLLQEVPCSSVSSANESSITMSVPLGNPCAFKEITPSVKEVIARDEKTESFV 220

Query: 1801 ----NNETRELNASSDVHDRSHKPDKPDVS----EMVQNDSENETSAA---------KNF 1673
                 N   E+N     +  S      D      ++VQN+  +              +N+
Sbjct: 221  TVEPENGKLEINDGKQTNGTSKDSRLEDSDALHMKLVQNEKPDGLDCELTIDGMQGNQNY 280

Query: 1672 PRHAPVQILDGSLASCSQGLSSDVSYQEPAFYQM-GIPSPSALFSNPTVSTAVESQTSTS 1496
            PRH  V ++DG+L + +Q  S D+ +++  F  + G+     +F+N   S   ESQ +T+
Sbjct: 281  PRHVTVHVVDGNLGTNTQNPSQDMLFRDSMFQPIGGVNGQRNVFTNTAPSNTSESQNNTA 340

Query: 1495 RSNDHHPMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXXXXXXXXXF 1316
            RS+ H    P  + PF Q  H Q+DY           ++IVS L+QNP           F
Sbjct: 341  RSSVHQSFLP--YPPFTQ--HNQDDYQSFLHMSSTFSNLIVSTLMQNPAAHAAASFAATF 396

Query: 1315 WPGPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLLPL*APPHA 1136
            WP  N E +A+SP    GGF  R IG                    A HGLLPL AP H 
Sbjct: 397  WPYANPETSANSPRCSQGGFTNRQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHT 456

Query: 1135 GFSCPPNPTTTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQPQHXXXXXXX 956
             F+CP + TT PS N  +AP    E+E+   Q P  Q +  + E SEA Q QH       
Sbjct: 457  SFACPASVTTVPSMNTGEAPALKAEQEKTTLQNPPLQDQMLDPEYSEAQQAQHSASKSPA 516

Query: 955  XXXXXXXXXXXXNLDLEVEASNK--EKKVLPSLXXXXXXXXXXXXXXXXXXXXXSNTPSG 782
                          D ++  S+K  + +   ++                     SNT S 
Sbjct: 517  ATLSDSESG-----DAKLNTSSKVTDHETNKTISEHLDSNKTKGRKPVDRSSCGSNTASS 571

Query: 781  SDVKTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS----EVSEGGRLAFQALF 614
            SDV+TDAL K E  KEE +  DA +   E ++RR R  SNL+    EVSE GRLAFQALF
Sbjct: 572  SDVETDALEKGEKGKEEPEIPDANQLAIEFSNRR-RSVSNLTDSWKEVSEEGRLAFQALF 630

Query: 613  SREVLPQSFSPPQYGPDKKQEMNDNAEGNRQN 518
            SREVLPQSFSPP    +   +M DNA  N+QN
Sbjct: 631  SREVLPQSFSPPHALKNTDHQM-DNANDNKQN 661



 Score = 64.3 bits (155), Expect(2) = 2e-91
 Identities = 33/59 (55%), Positives = 44/59 (74%)
 Frame = -3

Query: 407 DGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAAS 231
           +G+L     Q KLKT+RTGFKPYKRCS+EA+E NRV  SS   +E+  KR+RLEG+ ++
Sbjct: 692 EGLLTIGLGQGKLKTHRTGFKPYKRCSMEAKE-NRVGASSNQGEEQGCKRIRLEGETST 749


>ref|XP_003528756.1| PREDICTED: protein LHY isoform X1 [Glycine max]
            gi|571464896|ref|XP_006583195.1| PREDICTED: protein LHY
            isoform X2 [Glycine max] gi|571464898|ref|XP_006583196.1|
            PREDICTED: protein LHY isoform X3 [Glycine max]
            gi|571464900|ref|XP_006583197.1| PREDICTED: protein LHY
            isoform X4 [Glycine max] gi|571464902|ref|XP_006583198.1|
            PREDICTED: protein LHY isoform X5 [Glycine max]
            gi|571464905|ref|XP_006583199.1| PREDICTED: protein LHY
            isoform X6 [Glycine max] gi|571464907|ref|XP_006583200.1|
            PREDICTED: protein LHY isoform X7 [Glycine max]
            gi|571464909|ref|XP_006583201.1| PREDICTED: protein LHY
            isoform X8 [Glycine max] gi|571464911|ref|XP_006583202.1|
            PREDICTED: protein LHY isoform X9 [Glycine max]
          Length = 750

 Score =  291 bits (745), Expect(2) = 6e-88
 Identities = 224/629 (35%), Positives = 297/629 (47%), Gaps = 33/629 (5%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKTAVQIRSHAQKFF+KLEKEALVKG+PIG+A+DI+I            
Sbjct: 44   RAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALVKGVPIGKALDIDIPPPRPKRKPNNP 103

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNGE 1946
               K    S +      DGK     S     Q ++LEKE + E+    +G ++VKE   E
Sbjct: 104  YPRKTRIGSASLHSGAKDGKLNLVESSH-VNQALNLEKEPLPEKHDLDEGITTVKENKDE 162

Query: 1945 KCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFVSTKKPLINNE-------TR 1787
                  T   EVP S  +S+N+   T          FKE   + K +I  +       T 
Sbjct: 163  NRGAVFTLLQEVPCSSVSSANKSSITMSVPLGNPCAFKEITPSVKEVIPRDEKTESFVTI 222

Query: 1786 EL-NASSDVHDRSHKPDKPDVS----------EMVQNDSENETSAA---------KNFPR 1667
            EL N + +++DR         S          ++VQN+  +    A         +N+PR
Sbjct: 223  ELENGTLEINDRKQTNGTSKDSTLENSDALHMKLVQNEKTDGLDCALTIDGMQGNQNYPR 282

Query: 1666 HAPVQILDGSLASCSQGLSSDVSYQEPAFYQM-GIPSPSALFSNPTVSTAVESQTSTSRS 1490
            H  V ++DG+L + +Q  S D+ +++  F  + G+     +F+N   S   ESQ +T RS
Sbjct: 283  HVTVHVVDGNLGTNTQNPSQDMLFRDSMFQPIGGVNGQQNVFTNSAPSNTSESQNNTVRS 342

Query: 1489 NDHHPMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXXXXXXXXXFWP 1310
            + H    P  + PF Q  H Q+D            ++I+S L+QNP           FWP
Sbjct: 343  SVHQSFLP--YPPFTQ--HNQDDCQSFFHMSSTFSNLIISTLMQNPAAHAAASFAATFWP 398

Query: 1309 GPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLLPL*APPHAGF 1130
              N E +A+SP    GGF  R IG                    A HGLLPL AP H  F
Sbjct: 399  YANPETSANSPRCSQGGFTNRQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTSF 458

Query: 1129 SC-PPNPTTTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQPQHXXXXXXXX 953
            +C P + T  PS N  +AP    E+E+   Q P  Q +  + E SEA Q QH        
Sbjct: 459  ACSPASVTAVPSMNTGEAPALKAEQEKTTLQNPPLQDQMLDPEYSEAQQAQHSASKSPAA 518

Query: 952  XXXXXXXXXXXNLDLEVEASNKEKKVLPSLXXXXXXXXXXXXXXXXXXXXXSNTPSGSDV 773
                                ++  K +P                       S+T S SDV
Sbjct: 519  ILSDSESGDAKLNTSSKATDHETNKTIPE---HLDSNKTKGRKPVDRSSCGSHTASSSDV 575

Query: 772  KTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS----EVSEGGRLAFQALFSRE 605
            +TDAL K E  KEE +  DA +   + ++RR R  SNL+    EVSE GRLAFQALFSRE
Sbjct: 576  ETDALEKGEKGKEEPETPDANQLAIDFSNRR-RSVSNLTDSWKEVSEEGRLAFQALFSRE 634

Query: 604  VLPQSFSPPQYGPDKKQEMNDNAEGNRQN 518
            VLPQSFSPP    +K Q+M DNA  N+QN
Sbjct: 635  VLPQSFSPPHALKNKNQQM-DNANNNKQN 662



 Score = 62.8 bits (151), Expect(2) = 6e-88
 Identities = 32/59 (54%), Positives = 43/59 (72%)
 Frame = -3

Query: 407 DGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAAS 231
           +G+L     Q KLKT RTGFKPYKRCS+EA+E NRV  S+   +E+  KR+RLEG+ ++
Sbjct: 693 EGLLTIGLGQGKLKTRRTGFKPYKRCSMEAKE-NRVGASNNQGEEQGCKRIRLEGETST 750


>ref|NP_001236400.1| MYB transcription factor MYB114 [Glycine max]
            gi|571443651|ref|XP_006576273.1| PREDICTED: MYB
            transcription factor MYB114 isoform X1 [Glycine max]
            gi|571443653|ref|XP_006576274.1| PREDICTED: MYB
            transcription factor MYB114 isoform X2 [Glycine max]
            gi|158999370|gb|ABW87009.1| late elongated hypocotyl and
            circadian clock associated-1-like protein 2 [Glycine max]
          Length = 748

 Score =  280 bits (716), Expect(2) = 4e-84
 Identities = 220/630 (34%), Positives = 294/630 (46%), Gaps = 34/630 (5%)
 Frame = -1

Query: 2305 RAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQAIDIEIXXXXXXXXXXXX 2126
            RAWQRIEEHIGTKTAVQIRSHAQKFF+KLEKEA VKG+PIGQA+DI+I            
Sbjct: 44   RAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAFVKGVPIGQALDIDIPPPRPKRKPSNP 103

Query: 2125 XXXKIGTNSPNSQVRTSDGKQIPPGSVRTAEQVVDLEKEQVLEEPVGHDGESSVKETNGE 1946
               K    +P        GK +   +    +Q +DLEKE + E+       ++VKE    
Sbjct: 104  YPRKTNVGAPTLHSEAKHGKSLISIASSHGKQALDLEKEPLPEKHNVDLRPTTVKENKDG 163

Query: 1945 KCTKSLTCFNEVPSSLGASSNQVMATSVGSARKLSNFKEFV-STKKPLINNETREL---- 1781
             C    T   E P S  +S+N+   +     R     +EF+ S K+ +  +ET E     
Sbjct: 164  SCLNVFTIIQEAPCSSVSSANKNSTSISVPLRNSCALREFIPSVKEVITRDETNESFVTD 223

Query: 1780 ---NASSDVHDRSH-----------KPDKPDVSEMVQNDSENETSAA---------KNFP 1670
               N   ++ D  H           K +    SE+VQ +  +  + A         +N+P
Sbjct: 224  ELENQKLEIDDGKHTQKTNDTCEVSKLENSGASELVQTEKTDGRNCALTIDGVPGNQNYP 283

Query: 1669 RHAPVQILDGSLASCSQGLSSDVSYQEPAFY-QMGIPSPSALFSNPTVSTAVESQTSTSR 1493
            RH PV ++DG+L + +Q LS D+ +Q+  F  + G+     L +N   S   E Q + +R
Sbjct: 284  RHVPVHVVDGNLGTSTQNLSPDMVFQDSIFQPKGGVNRQPNLVTNSATSHISECQNNAAR 343

Query: 1492 SNDHHPMFPNSHLPFNQLPHTQEDYXXXXXXXXXXXSMIVSALLQNPXXXXXXXXXXXFW 1313
            S+ H    P+        P  Q+DY           S+IVS LLQNP           FW
Sbjct: 344  SSIHQSFPPSP-------PFAQDDYHSFLHMSSTFSSLIVSTLLQNPAAHAAASFAATFW 396

Query: 1312 PGPNMENTAHSPTGLGGGFPPRPIGXXXXXXXXXXXXXXXXXXXXATHGLLPL*APPHAG 1133
            P  N E +A SP      FP R IG                    A HGLLPL  P H  
Sbjct: 397  PYANAETSADSPV-CTPDFPSRQIGSPPSVTAIAAATVAAATAWWAAHGLLPLCGPLHTA 455

Query: 1132 FSCPP-NPTTTPSANFTQAPVASEEREENNFQTPESQVEKPNQELSEALQPQHXXXXXXX 956
            F+CPP + TT PS    ++P    ER E   Q P  Q + P+ E SEA   QH       
Sbjct: 456  FACPPASATTVPSMIIDESP-QKTERGEIKPQNPPLQDQIPDPEHSEA---QHSAPKSPA 511

Query: 955  XXXXXXXXXXXXNLDLEVEASNKEKKVLPSLXXXXXXXXXXXXXXXXXXXXXSNTPSGSD 776
                        NLD   +A+N E     ++                     SNT S S+
Sbjct: 512  VSSSKSEDRGDANLDTSPKATNHEMN--QAISENPDSNKMKGRKPVDRSSCGSNTTSSSE 569

Query: 775  VKTDALGKNEDEKEEVKETDATRATSEPNSRRNRIASNLS----EVSEGGRLAFQALFSR 608
             +T+ L K+E EKEE K  DA    +E ++RR+R  SNL+    EVSE GRLAFQALFSR
Sbjct: 570  -ETELLEKDEKEKEEPKTPDANVLDTELSNRRSRSISNLTDSWKEVSEEGRLAFQALFSR 628

Query: 607  EVLPQSFSPPQYGPDKKQEMNDNAEGNRQN 518
            EVLPQSFSP  +  +K  ++ D+ + N  N
Sbjct: 629  EVLPQSFSPTHHLINKDNQI-DSIKDNELN 657



 Score = 61.2 bits (147), Expect(2) = 4e-84
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = -3

Query: 410 KDGILIFSHEQVKLKTNRTGFKPYKRCSVEARESNRVTNSSTPEQEKCSKRLRLEGDAAS 231
           ++G+L       KLKT RTGFKPYKRCSVEA E NR+  +    +EK  KRLRL G+A++
Sbjct: 690 EEGLLTIGLGPGKLKTRRTGFKPYKRCSVEANE-NRIGTACIQGEEKGPKRLRLNGEAST 748


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