BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00008292
         (1462 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   530   e-148
gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theob...   528   e-147
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II su...   526   e-147
gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus pe...   523   e-145
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr...   522   e-145
ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, ...   522   e-145
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su...   522   e-145
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   521   e-145
ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, ...   520   e-145
ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II su...   519   e-144
ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-...   518   e-144
ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II su...   518   e-144
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ...   518   e-144
ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polype...   516   e-144
ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II su...   515   e-143
gb|AFK41039.1| unknown [Medicago truncatula]                          514   e-143
gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus...   510   e-142
ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [A...   506   e-141
ref|XP_006298158.1| hypothetical protein CARUB_v10014208mg [Caps...   501   e-139
ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi...   499   e-139

>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 318

 Score =  530 bits (1364), Expect = e-148
 Identities = 271/317 (85%), Positives = 292/317 (92%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG  SYQRFPRIKIRE++DD+ KFELRDTD+SMANALRRVMIAEVPTVAIDLVEIEVNS
Sbjct: 1    MEG-ASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNS 59

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQC+YCSVEFHLRAKCI DQTLD
Sbjct: 60   SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLD 119

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAK 827
            VTSKDL SSDHTV P+DF DS +  D+S+ RGIIIVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 120  VTSKDLYSSDHTVVPVDFSDS-SGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 826  WSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYT 647
            WSPAATVTFMYEPDI INEDLME+LS ++K+ WVESSPTKVFDIDP T QVVVVDPEAYT
Sbjct: 179  WSPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPEAYT 238

Query: 646  YDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLP 467
            YD+EVIKKAE+MGKPGLV I AKE+SFIFTVESTGA+KASQLVLNAIE+LK KLDAVRL 
Sbjct: 239  YDEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLS 298

Query: 466  EDNVD----FGELGAHM 428
            ED V+    FGELGAHM
Sbjct: 299  EDTVEADDQFGELGAHM 315


>gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
          Length = 318

 Score =  528 bits (1361), Expect = e-147
 Identities = 268/317 (84%), Positives = 295/317 (93%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG +SYQRFP++KIRE++DD+ KFELRDTD+SMANALRRVMIAEVPT+AIDLVEIEVNS
Sbjct: 1    MEG-VSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNS 59

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ DQTLD
Sbjct: 60   SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLD 119

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAK 827
            VTSKDL SSDHTV P+DF DS A  D+S+ RGIIIVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 120  VTSKDLYSSDHTVVPVDFTDS-AGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 826  WSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYT 647
            WSPAATVTFMYEP+I INED+METL+ ++K+ +VESSPT+VFDIDP T QVVVVDPEAYT
Sbjct: 179  WSPAATVTFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVVDPEAYT 238

Query: 646  YDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLP 467
            YDDEV+KKAEAMGKPGLVEIYAKE+SFIFTVESTGA+KASQLVLNAIEVLK KLDAVRL 
Sbjct: 239  YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLS 298

Query: 466  EDNVD----FGELGAHM 428
            ED V+    FGELGAHM
Sbjct: 299  EDTVEADDQFGELGAHM 315


>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cicer
            arietinum]
          Length = 319

 Score =  526 bits (1356), Expect = e-147
 Identities = 264/317 (83%), Positives = 292/317 (92%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG  SY R PR+KIRE++DD++KFELRDTD+S+ANALRRVMI+EVPT+AIDLVEIEVNS
Sbjct: 1    MEG-ASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTIAIDLVEIEVNS 59

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLR KCI DQTLD
Sbjct: 60   SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLD 119

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAK 827
            VTSKDL SSDHTV P+DF   P+S ++SD RGIIIVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 120  VTSKDLYSSDHTVVPVDFSADPSSLESSDGRGIIIVKLRRGQELRLRAIARKGIGKDHAK 179

Query: 826  WSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYT 647
            WSPAATVTFMYEPDI INEDLME+L+ ++K+EWV+SSPT+VFDIDP T QV+VVDPEAY+
Sbjct: 180  WSPAATVTFMYEPDIHINEDLMESLTLEEKREWVDSSPTRVFDIDPVTQQVMVVDPEAYS 239

Query: 646  YDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLP 467
            YDDEVIKKAEAMGKPGLVEI AK++SFIFTVESTGAVKASQL+LNAIE+LK KLDAVRL 
Sbjct: 240  YDDEVIKKAEAMGKPGLVEITAKQDSFIFTVESTGAVKASQLLLNAIEILKQKLDAVRLS 299

Query: 466  EDNVD----FGELGAHM 428
            ED V+    FGELGAHM
Sbjct: 300  EDTVEADDQFGELGAHM 316


>gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus persica]
          Length = 318

 Score =  523 bits (1346), Expect = e-145
 Identities = 265/317 (83%), Positives = 291/317 (91%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG  SYQR PR+KIREMRDD++KFELRDTD+S+ANALRRVMIAEVPTVAIDLVEIE+NS
Sbjct: 1    MEGK-SYQRLPRVKIREMRDDYMKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINS 59

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFIAHRLGLIPLTS+RAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC  DQTLD
Sbjct: 60   SVLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLD 119

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAK 827
            VTSKDLLSSDHTV P+DF DS A  ++S+ +GIIIVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 120  VTSKDLLSSDHTVVPVDFSDS-AGMESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 826  WSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYT 647
            WSPAATVTFMYEPDI INE+LM+ L+ D+KK WVESSPTKVFD DP T +V+VVDPEAYT
Sbjct: 179  WSPAATVTFMYEPDIRINEELMDMLTLDEKKAWVESSPTKVFDFDPKTEKVMVVDPEAYT 238

Query: 646  YDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLP 467
            YDDEVIKKAEAMGKPGLV+I AKE+SFIFTVESTGAVKASQL+LNAIE+LK KLDAVRL 
Sbjct: 239  YDDEVIKKAEAMGKPGLVDIIAKEDSFIFTVESTGAVKASQLLLNAIEILKQKLDAVRLS 298

Query: 466  EDNVD----FGELGAHM 428
            ED V+    FGELGAHM
Sbjct: 299  EDTVEADDQFGELGAHM 315


>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
            gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
            RNA polymerases II, IV and V subunit 3-like [Citrus
            sinensis] gi|557524889|gb|ESR36195.1| hypothetical
            protein CICLE_v10028849mg [Citrus clementina]
          Length = 319

 Score =  522 bits (1344), Expect = e-145
 Identities = 263/312 (84%), Positives = 283/312 (90%), Gaps = 4/312 (1%)
 Frame = -1

Query: 1351 SYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNSSVLND 1172
            SYQRFP++KIRE++DD+ KFELRDTD+SMANALRRVMIAEVPT+AIDLVEIEVNSSVLND
Sbjct: 5    SYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLND 64

Query: 1171 EFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLDVTSKD 992
            EFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC  DQTLDVTSKD
Sbjct: 65   EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKD 124

Query: 991  LLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAKWSPAA 812
            L SSDH+V P+DF D    D     RGIIIVKLR+GQELRLRAIARKGIGKDHAKWSPAA
Sbjct: 125  LYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAA 184

Query: 811  TVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYTYDDEV 632
            TVTFMYEP+I INEDLME+LS ++K+ WVESSPTKVFDIDP T QV VVD EAYTYDDEV
Sbjct: 185  TVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTYDDEV 244

Query: 631  IKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLPEDNVD 452
            IKKAEAMGKPGLVEIYAKE+SFIFTVESTGA+KASQLVLNAIEVLK KLDAVRL ED V+
Sbjct: 245  IKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSEDTVE 304

Query: 451  ----FGELGAHM 428
                FGELGAHM
Sbjct: 305  ADDQFGELGAHM 316


>ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Glycine max]
          Length = 320

 Score =  522 bits (1344), Expect = e-145
 Identities = 259/317 (81%), Positives = 290/317 (91%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG +SY R PR+KIRE++DD+ KFELRDTD+S+ANALRRVMIAEVPTVAIDLVEIEVNS
Sbjct: 1    MEGGVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNS 60

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLR KC+ DQTLD
Sbjct: 61   SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLD 120

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAK 827
            VTSKDL SSD TV+P+DF D  A+D   +NRGIIIVKLR+GQEL+LRAIARKGIGKDHAK
Sbjct: 121  VTSKDLYSSDPTVSPVDFSDPSATDSPDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAK 180

Query: 826  WSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYT 647
            WSPAATVTFMYEP+I INEDLMETL+ ++K+EWV+SSPT+VF+IDP T QV+VVD EAYT
Sbjct: 181  WSPAATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYT 240

Query: 646  YDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLP 467
            YDDEV+KKAEAMGKPGLVEI A+++SFIFTVESTGAVKASQLVLNAIE+LK KLDAVRL 
Sbjct: 241  YDDEVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLS 300

Query: 466  EDNVD----FGELGAHM 428
            ED V+    FGELGAHM
Sbjct: 301  EDTVEADDQFGELGAHM 317


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
            vinifera]
          Length = 318

 Score =  522 bits (1344), Expect = e-145
 Identities = 265/317 (83%), Positives = 291/317 (91%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG +SYQRFP+IKIRE++DD+ KFELR+TD+SMANALRRVMIAEVPTVAIDLVEIEVNS
Sbjct: 1    MEG-VSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNS 59

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLD
Sbjct: 60   SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLD 119

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAK 827
            VTSKDL+SSDHTV P+DF DS   D A D +GIIIVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 120  VTSKDLISSDHTVVPVDFSDSSGYDSA-DKKGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 826  WSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYT 647
            WSPAATVTFMYEP+I INEDLME+L+ ++K  WVESSPTKVFDID ++ QVVV D EAYT
Sbjct: 179  WSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYT 238

Query: 646  YDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLP 467
            YDDEV+KKAEAMGKPGLVEIYAKE+SFIFTVESTGA+KASQLVLNAI+VLK KLDAVRL 
Sbjct: 239  YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLS 298

Query: 466  EDNVD----FGELGAHM 428
            ED V+    FGELGAHM
Sbjct: 299  EDTVEADDQFGELGAHM 315


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  521 bits (1341), Expect = e-145
 Identities = 264/317 (83%), Positives = 291/317 (91%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG +SYQRFP+IKIRE++DD+ KFELR+TD+SMANALRRVMIAEVPTVAIDLVEIEVNS
Sbjct: 1    MEG-VSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNS 59

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLD
Sbjct: 60   SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLD 119

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAK 827
            VTSKDL+SSDHTV P+DF DS   D A D +GIIIVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 120  VTSKDLISSDHTVVPVDFSDSSGYDSA-DKKGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 826  WSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYT 647
            WSPAATVTFMYEP+I INEDLME+L+ ++K  WVESSPTKVFDID ++ QVVV D EAYT
Sbjct: 179  WSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYT 238

Query: 646  YDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLP 467
            YDDEV+KKAEAMGKPGLVEIYAKE+SFIFTVESTGA+KASQLVLNAI+VLK KLDAVRL 
Sbjct: 239  YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLS 298

Query: 466  EDNVD----FGELGAHM 428
            ED V+    FGELGAHM
Sbjct: 299  EDTVEADDQFGELGAHM 315


>ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Glycine max]
          Length = 319

 Score =  520 bits (1339), Expect = e-145
 Identities = 259/317 (81%), Positives = 292/317 (92%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG +SY R PR+KIRE++DD+ KFELRDTD+S+ANALRRVMIAEVPTVAIDLVEIEVNS
Sbjct: 1    MEGGVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNS 60

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLR KC+ DQTLD
Sbjct: 61   SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLD 120

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAK 827
            VTSKDL SSD TV+P+DF D P++ D+ +NRGIIIVKLR+GQEL+LRAIARKGIGKDHAK
Sbjct: 121  VTSKDLYSSDPTVSPVDFSD-PSATDSDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAK 179

Query: 826  WSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYT 647
            WSPAATVTFMYEP+I INEDLMETL+ ++K+EWV+SSPT+VF+IDP T QV+VVD EAYT
Sbjct: 180  WSPAATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYT 239

Query: 646  YDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLP 467
            YDDEV+KKAEAMGKPGLVEI A+++SFIFTVESTGAVKASQLVLNAIE+LK KLDAVRL 
Sbjct: 240  YDDEVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLS 299

Query: 466  EDNVD----FGELGAHM 428
            ED V+    FGELGAHM
Sbjct: 300  EDTVEADDQFGELGAHM 316


>ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
            [Solanum lycopersicum]
          Length = 319

 Score =  519 bits (1336), Expect = e-144
 Identities = 257/317 (81%), Positives = 293/317 (92%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG +SYQRFP+IK+RE++DDF+KFELRDTD+S+ANALRR+MIAEVPT+AIDLVEIEVNS
Sbjct: 1    MEG-VSYQRFPKIKVREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNS 59

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFI+HRLGL+PLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC+ DQTLD
Sbjct: 60   SVLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLD 119

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAK 827
            VTSKDLLSSDHTV P+D+ D+ +S D + N+GIIIVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 120  VTSKDLLSSDHTVVPVDYSDASSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAK 179

Query: 826  WSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYT 647
            WSPAATVTFMYEP+I INED+ME+L+ ++K E VESSPTKVF IDP   QV+VVDPEAYT
Sbjct: 180  WSPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYT 239

Query: 646  YDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLP 467
            YDDEV+KKAEAMGKPG+VEI+AKE+SFIFTVE+TGAVKASQLVLNAIEVLK KLDAVRL 
Sbjct: 240  YDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLS 299

Query: 466  EDNVD----FGELGAHM 428
            +D V+    FGELGAHM
Sbjct: 300  DDTVEADDQFGELGAHM 316


>ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula]
            gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation
            [Medicago truncatula] gi|355508950|gb|AES90092.1|
            DNA-directed RNA polymerase II subunit RPB3-A [Medicago
            truncatula]
          Length = 318

 Score =  518 bits (1335), Expect = e-144
 Identities = 263/317 (82%), Positives = 291/317 (91%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG  SY R PR+KIRE++DD++KFELRDTD+S+ANALRRVMI+EVPTVAIDLVEIEVNS
Sbjct: 1    MEG-ASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNS 59

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLR KCI DQTLD
Sbjct: 60   SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLD 119

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAK 827
            V+SKDL+SSDHTVTP+D     AS + SD RGIIIVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 120  VSSKDLISSDHTVTPVDVPGGDASIE-SDGRGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 826  WSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYT 647
            WSPAATVTFMYEPDI INEDLME+L+ ++KKEWV+SSPT+VFDIDP T QV+VVDPEAY+
Sbjct: 179  WSPAATVTFMYEPDIHINEDLMESLTLEEKKEWVDSSPTRVFDIDPVTQQVMVVDPEAYS 238

Query: 646  YDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLP 467
            YDDEVIKKAEAMGKPGL+EI AK++SFIFTVESTGAVKASQL+LN+IE+LK KLDAVRL 
Sbjct: 239  YDDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEILKQKLDAVRLS 298

Query: 466  EDNVD----FGELGAHM 428
            ED V+    FGELGAHM
Sbjct: 299  EDTVEADDQFGELGAHM 315


>ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
            [Fragaria vesca subsp. vesca]
          Length = 318

 Score =  518 bits (1334), Expect = e-144
 Identities = 263/317 (82%), Positives = 291/317 (91%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG  SYQRFPR+KIREMR D+LKFELRDTD+S+ANALRRVMIAEVPTVAIDLVEIE+NS
Sbjct: 1    MEGK-SYQRFPRVKIREMRHDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINS 59

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFIAHRLGLIPLTS+RAM+MRFSRDCDACDGDGQCEYCSVEFHLRA+C  DQTLD
Sbjct: 60   SVLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRARCHSDQTLD 119

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAK 827
            VTSK+LLSSDHTV P+DF D+ +  +AS+ RGIIIVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 120  VTSKELLSSDHTVVPVDFSDA-SGYEASEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 826  WSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYT 647
            WSPAATVTFMYEPDI INE++M+TLS + K  WV+SSPTKVF+IDP T +VVVVDPEAYT
Sbjct: 179  WSPAATVTFMYEPDIRINEEMMDTLSLEDKAAWVDSSPTKVFEIDPNTGKVVVVDPEAYT 238

Query: 646  YDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLP 467
            YDDEVIKKAEAMGKPGLV+I AKE+SFIFTVESTGA+KASQL+LNAIE+LK KLDAVRL 
Sbjct: 239  YDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEILKQKLDAVRLS 298

Query: 466  EDNVD----FGELGAHM 428
            ED V+    FGELGAHM
Sbjct: 299  EDTVEADDQFGELGAHM 315


>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Solanum tuberosum]
          Length = 319

 Score =  518 bits (1333), Expect = e-144
 Identities = 257/317 (81%), Positives = 293/317 (92%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG +SYQRFP+IKIRE++DDF+KFELR+TD+S+ANALRR+MIAEVPT+AIDLVEIEVNS
Sbjct: 1    MEG-VSYQRFPKIKIREVKDDFMKFELRETDASIANALRRIMIAEVPTIAIDLVEIEVNS 59

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFI+HRLGL+PLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC+ DQTLD
Sbjct: 60   SVLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLD 119

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAK 827
            VTSKDLLSSDHTV P+D+ D+ +S D + N+GIIIVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 120  VTSKDLLSSDHTVVPVDYSDTSSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAK 179

Query: 826  WSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYT 647
            WSPAATVTFMYEP+I INED+ME+L+ ++K E VESSPTKVF IDP   QV+VVDPEAYT
Sbjct: 180  WSPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYT 239

Query: 646  YDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLP 467
            YDDEV+KKAEAMGKPG+VEI+AKE+SFIFTVE+TGAVKASQLVLNAIEVLK KLDAVRL 
Sbjct: 240  YDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLS 299

Query: 466  EDNVD----FGELGAHM 428
            +D V+    FGELGAHM
Sbjct: 300  DDTVEADDQFGELGAHM 316


>ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein
            [Populus trichocarpa] gi|550331423|gb|EEE87820.2|
            DNA-directed RNA polymerase II 36 kDa polypeptide B
            family protein [Populus trichocarpa]
          Length = 323

 Score =  516 bits (1330), Expect = e-144
 Identities = 262/318 (82%), Positives = 286/318 (89%), Gaps = 8/318 (2%)
 Frame = -1

Query: 1357 NISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNSSVL 1178
            ++SYQRFP+IKIREM+DD+LKFELR+TD+SMANALRRVMIAEVPT+AIDLVEIEVNSSVL
Sbjct: 3    SVSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVL 62

Query: 1177 NDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLDVTS 998
            NDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEYCSVEFHLRAKCI DQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDVTS 122

Query: 997  KDLLSSDHTVTPIDFGDSPASDDASDN----RGIIIVKLRKGQELRLRAIARKGIGKDHA 830
            KDL SSDH V P+DF D   ++D  D+    RGIIIVKLR+GQELRLRAIARKGIGKDHA
Sbjct: 123  KDLYSSDHAVIPVDFSDPSDANDPFDHTETQRGIIIVKLRRGQELRLRAIARKGIGKDHA 182

Query: 829  KWSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAY 650
            KWSPAATVTFMYEP+I INEDLMETL+ ++K  W+ESSPTKVFDID  T QVVVVDPEAY
Sbjct: 183  KWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVFDIDKVTQQVVVVDPEAY 242

Query: 649  TYDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRL 470
            TYDDEVIKKAEAMGK GL++I AKE+SFIFTVESTGAVKASQLVLNAIE+LK KLDAVRL
Sbjct: 243  TYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRL 302

Query: 469  PEDNVD----FGELGAHM 428
             +D V+    FGELG HM
Sbjct: 303  SDDTVEADDQFGELGVHM 320


>ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
            [Cucumis sativus]
          Length = 320

 Score =  515 bits (1327), Expect = e-143
 Identities = 259/318 (81%), Positives = 290/318 (91%), Gaps = 5/318 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG+ SYQRFP++KIRE+RDD+ KFELRDTD+SMANALRRVMIAEVPT+AIDLVEIEVNS
Sbjct: 1    MEGS-SYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNS 59

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC  DQTLD
Sbjct: 60   SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLD 119

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASD-DASDNRGIIIVKLRKGQELRLRAIARKGIGKDHA 830
            VTSKDL SSDHTV P+DF DS A+  +A D +GIIIVKLR+GQELRLRAIARKGIGKDHA
Sbjct: 120  VTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHA 179

Query: 829  KWSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAY 650
            KWSPAATVTFMYEP I INEDLMETL+ ++K+ WVES PT+VF++D  THQV+VVDPEAY
Sbjct: 180  KWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAY 239

Query: 649  TYDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRL 470
            TYDDEVIKKAEAMGK GLV+I A+E+SFIFTVESTGA+KASQL+LNAI++LK KLDAVRL
Sbjct: 240  TYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRL 299

Query: 469  PEDNVD----FGELGAHM 428
             +D V+    FGELGAHM
Sbjct: 300  SDDTVEADDQFGELGAHM 317


>gb|AFK41039.1| unknown [Medicago truncatula]
          Length = 318

 Score =  514 bits (1323), Expect = e-143
 Identities = 262/317 (82%), Positives = 290/317 (91%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG  SY R PR+KIRE++DD++KFELRDTD+S+ANALRRVMI+EVPTVAIDLVEIEVNS
Sbjct: 1    MEG-ASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNS 59

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLR K I DQTLD
Sbjct: 60   SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKRITDQTLD 119

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAK 827
            V+SKDL+SSDHTVTP+D     AS + SD RGIIIVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 120  VSSKDLISSDHTVTPVDVPGGDASIE-SDGRGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 826  WSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYT 647
            WSPAATVTFMYEPDI INEDLME+L+ ++KKEWV+SSPT+VFDIDP T QV+VVDPEAY+
Sbjct: 179  WSPAATVTFMYEPDIHINEDLMESLTLEEKKEWVDSSPTRVFDIDPVTQQVMVVDPEAYS 238

Query: 646  YDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLP 467
            YDDEVIKKAEAMGKPGL+EI AK++SFIFTVESTGAVKASQL+LN+IE+LK KLDAVRL 
Sbjct: 239  YDDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEILKQKLDAVRLS 298

Query: 466  EDNVD----FGELGAHM 428
            ED V+    FGELGAHM
Sbjct: 299  EDTVEADDQFGELGAHM 315


>gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus vulgaris]
          Length = 318

 Score =  510 bits (1313), Expect = e-142
 Identities = 255/317 (80%), Positives = 291/317 (91%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG  SY R PR+KIRE++DD+ KFELRDTD+S+ANALRRVMIAEVPT+AIDLVEIEVNS
Sbjct: 1    MEG-ASYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNS 59

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLR KC+ DQTLD
Sbjct: 60   SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLD 119

Query: 1006 VTSKDLLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAK 827
            V+SKDL SSD +V P+DF D PAS D+S++RG+IIVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 120  VSSKDLYSSDPSVVPVDFSD-PASTDSSESRGVIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 826  WSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYT 647
            WSPAATVTFMYEP+I +NEDLMETL+ ++K+EWV+SSPT+VF+IDP T QV+VVD EAY+
Sbjct: 179  WSPAATVTFMYEPEIHLNEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDSEAYS 238

Query: 646  YDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLP 467
            YDDEVIKKAEAMGKPGLVEI A+++SFIFTVESTGA+K+SQLVLNAIE+LK KLDAVRL 
Sbjct: 239  YDDEVIKKAEAMGKPGLVEIIARQDSFIFTVESTGAIKSSQLVLNAIEILKQKLDAVRLS 298

Query: 466  EDNVD----FGELGAHM 428
            ED V+    FGELGAHM
Sbjct: 299  EDTVEADDQFGELGAHM 315


>ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda]
            gi|548856809|gb|ERN14637.1| hypothetical protein
            AMTR_s00038p00194050 [Amborella trichopoda]
          Length = 324

 Score =  506 bits (1303), Expect = e-141
 Identities = 258/320 (80%), Positives = 284/320 (88%), Gaps = 7/320 (2%)
 Frame = -1

Query: 1366 MEGNISYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNS 1187
            MEG +SYQRFP++KIREM+DD+LKFELR+TD SMANALRR+M+AEVPT+AIDLVEIE NS
Sbjct: 1    MEG-VSYQRFPKVKIREMKDDYLKFELRETDPSMANALRRIMLAEVPTIAIDLVEIEANS 59

Query: 1186 SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLD 1007
            SVLNDEF+AHRLGLIPLTSE+AM+MRFSRDCDACDGDGQCEYCSVEF L  KC  DQTLD
Sbjct: 60   SVLNDEFLAHRLGLIPLTSEKAMSMRFSRDCDACDGDGQCEYCSVEFQLSVKCDSDQTLD 119

Query: 1006 VTSKDLLSSDHTVTPIDF---GDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKD 836
            VTS DL+SSD  V P+D    G      DAS+ RGIIIVKLR+GQELRLRAIARKGIGKD
Sbjct: 120  VTSADLVSSDIHVIPVDVAGRGMDSNGFDASEQRGIIIVKLRRGQELRLRAIARKGIGKD 179

Query: 835  HAKWSPAATVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPE 656
            HAKWSP ATVTFMYEP+I IN+DLMETLS D+K+EWVESSPT+VFDIDP THQVVVVDPE
Sbjct: 180  HAKWSPGATVTFMYEPEIHINDDLMETLSLDEKREWVESSPTRVFDIDPNTHQVVVVDPE 239

Query: 655  AYTYDDEVIKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAV 476
            AYTYDDEVIKKAEAMGKPGLVEIYA+E+SFIFTVESTGA+KASQLV+NAIEVLK KLDAV
Sbjct: 240  AYTYDDEVIKKAEAMGKPGLVEIYAREDSFIFTVESTGAIKASQLVINAIEVLKQKLDAV 299

Query: 475  RL----PEDNVDFGELGAHM 428
            RL     E +  FGELGAHM
Sbjct: 300  RLSLDTEEGDEQFGELGAHM 319


>ref|XP_006298158.1| hypothetical protein CARUB_v10014208mg [Capsella rubella]
            gi|482566867|gb|EOA31056.1| hypothetical protein
            CARUB_v10014208mg [Capsella rubella]
          Length = 319

 Score =  501 bits (1289), Expect = e-139
 Identities = 248/312 (79%), Positives = 285/312 (91%), Gaps = 4/312 (1%)
 Frame = -1

Query: 1351 SYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNSSVLND 1172
            +YQRFP++KIRE++DD+ KFELR+TD SMANALRRVMI+EVPTVAIDLVEIEVNSSVLND
Sbjct: 5    TYQRFPKVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLND 64

Query: 1171 EFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLDVTSKD 992
            EFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEF L +KC+ DQTLDVTS+D
Sbjct: 65   EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSSKCVTDQTLDVTSRD 124

Query: 991  LLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAKWSPAA 812
            L S+D TVTP+DF    ++ D+S+++GIIIVKLR+GQELRLRAIARKGIGKDHAKWSPAA
Sbjct: 125  LYSADPTVTPVDFTIDSSASDSSEHKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAA 184

Query: 811  TVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYTYDDEV 632
            TVTFMYEPDIIINED+M+TL+ D+K + +ES PTKVF IDP T QVVVVDPEAYTYD+EV
Sbjct: 185  TVTFMYEPDIIINEDMMDTLTEDEKIDLIESCPTKVFGIDPVTRQVVVVDPEAYTYDEEV 244

Query: 631  IKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLPEDNVD 452
            IKKAEAMGKPGL+EI+ K++SFIFTVESTGAVKASQLVLNAI++LK KLDAVRL +D V+
Sbjct: 245  IKKAEAMGKPGLIEIHPKDDSFIFTVESTGAVKASQLVLNAIDILKQKLDAVRLSDDTVE 304

Query: 451  ----FGELGAHM 428
                FGELGAHM
Sbjct: 305  ADDQFGELGAHM 316


>ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi|297329735|gb|EFH60154.1|
            RBP36A [Arabidopsis lyrata subsp. lyrata]
          Length = 319

 Score =  499 bits (1286), Expect = e-139
 Identities = 249/312 (79%), Positives = 284/312 (91%), Gaps = 4/312 (1%)
 Frame = -1

Query: 1351 SYQRFPRIKIREMRDDFLKFELRDTDSSMANALRRVMIAEVPTVAIDLVEIEVNSSVLND 1172
            +YQRFP+I IRE++DD+ KFELR+TD SMANALRRVMI+EVPTVAIDLVEIEVNSSVLND
Sbjct: 5    TYQRFPKITIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLND 64

Query: 1171 EFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLDVTSKD 992
            EFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEF L AKC+ DQTLDVTS+D
Sbjct: 65   EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLDVTSRD 124

Query: 991  LLSSDHTVTPIDFGDSPASDDASDNRGIIIVKLRKGQELRLRAIARKGIGKDHAKWSPAA 812
            L S+D TVTP+DF    ++ D+S+ +GIIIVKLR+GQEL+LRAIARKGIGKDHAKWSPAA
Sbjct: 125  LYSADPTVTPVDFTIDSSASDSSEQKGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPAA 184

Query: 811  TVTFMYEPDIIINEDLMETLSYDQKKEWVESSPTKVFDIDPATHQVVVVDPEAYTYDDEV 632
            TVTFMYEPDIIINED+M+TLS ++K + +ESSPTKVF IDP T QVVVVDPEAYTYD+EV
Sbjct: 185  TVTFMYEPDIIINEDMMDTLSDEEKIDLIESSPTKVFGIDPVTRQVVVVDPEAYTYDEEV 244

Query: 631  IKKAEAMGKPGLVEIYAKENSFIFTVESTGAVKASQLVLNAIEVLKAKLDAVRLPEDNVD 452
            IKKAEAMGKPGL+EI+ K++SFIFTVESTGAVKASQLVLNAI++LK KLDAVRL +D V+
Sbjct: 245  IKKAEAMGKPGLIEIHPKDDSFIFTVESTGAVKASQLVLNAIDILKQKLDAVRLSDDTVE 304

Query: 451  ----FGELGAHM 428
                FGELGAHM
Sbjct: 305  ADDQFGELGAHM 316