BLASTX nr result
ID: Achyranthes22_contig00008016
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00008016
(477 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD61286.1| fertility restorer homologue [Raphanus sativus] ... 165 5e-39
emb|CAD61285.1| fertility restorer [Raphanus sativus] gi|3245238... 165 5e-39
gb|ACM24117.1| PPR protein [Raphanus sativus] 165 5e-39
dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus] 165 5e-39
gb|ABO70667.1| restorer-of-fertility [Raphanus sativus] 165 5e-39
dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus] 165 7e-39
gb|EOY09749.1| ATP binding,nucleic acid binding,helicases, putat... 159 5e-37
gb|EOY11598.1| ATP binding,nucleic acid binding,helicases, putat... 157 2e-36
gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana] 156 3e-36
ref|NP_172730.3| RNA processing factor1 [Arabidopsis thaliana] g... 156 3e-36
emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein... 156 3e-36
sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide... 156 3e-36
emb|CAZ44328.1| restoring pentatricopeptide repeat protein homol... 155 4e-36
emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus... 155 5e-36
gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raph... 155 5e-36
emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat ... 154 9e-36
gb|EOY11605.1| Tetratricopeptide repeat-like superfamily protein... 153 3e-35
gb|EMJ09209.1| hypothetical protein PRUPE_ppa003306mg [Prunus pe... 153 3e-35
ref|XP_006382123.1| hypothetical protein POPTR_0006s28580g [Popu... 152 3e-35
ref|XP_006382722.1| helicase domain-containing family protein [P... 152 4e-35
>emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility
[Raphanus sativus] gi|157931526|gb|ABW04887.1| PPR
[Raphanus sativus] gi|194295008|gb|ABO70666.2|
restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 165 bits (418), Expect = 5e-39
Identities = 82/155 (52%), Positives = 109/155 (70%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+P++VTF TL+NGL + +AV L R+++ G QPT +T+GTI +C+ GD AL
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 287 LLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGM 108
LLR ME SH++PNVVIYS I+DSLCKDG S A LF EM+ KGI PD+ TY+++I G
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 107 CTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
C+ G W+DA+ LL EMLE KI+PD T N LI+ +
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Score = 91.7 bits (226), Expect = 9e-17
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+++TFNTLI+G + + ++L H + + G T+ T+ GD A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEM-KSK----------GIR 147
L LL+ M S S + P++V T+LD LC +G L A+ +F M KSK G+
Sbjct: 450 LDLLQEMIS-SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
PDV TY+ +I G+ G + +A+ L EM I PD T + +ID
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/149 (32%), Positives = 83/149 (55%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G +PD+ T+N LI+GL++ + +A +L+ + G P +T+ ++ LC+ A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
++ +M S S PNVV ++T+++ CK G + + LF EM +GI + ITY T+I
Sbjct: 566 TQMFDSMGSKSF-SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRT 27
G +G+ N A + EM+ + + PD T
Sbjct: 625 GFRKVGNINGALDIFQEMISSGVYPDTIT 653
Score = 87.0 bits (214), Expect = 2e-15
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G D T+NTLI+G V N A+DL ++ G P +VT T+ LC G A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Query: 293 LKLLRNMESH------SH----VMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRP 144
L++ + M+ SH V P+V Y+ ++ L +G +A L+ EM +GI P
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Query: 143 DVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
D ITYS++I G+C ++A + M +P+ T LI+ Y
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Score = 83.2 bits (204), Expect = 3e-14
Identities = 48/154 (31%), Positives = 78/154 (50%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD+ T+N++I G S + + A L +++ P +VT+ + + + G A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L M ++PN + YS+++D CK L A +F M +KG P++IT++T+I
Sbjct: 345 EELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G C +D LL EM E + D T N LI
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Score = 83.2 bits (204), Expect = 3e-14
Identities = 45/152 (29%), Positives = 77/152 (50%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
PD+VT+N LIN V + +A +L+ ++ G P +T+ ++ C+ A +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
M + PN++ ++T++D C + + L EM G+ D TY+T+I G
Sbjct: 383 FYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
+G N A LL EM+ + + PD TC+ L+D
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Score = 77.4 bits (189), Expect = 2e-12
Identities = 45/154 (29%), Positives = 83/154 (53%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P++V ++ +I+ L + + A +L+ + + G P L T+ ++ C +G + A +L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
L+ M + P+VV Y+ ++++ K+G +A L+ EM +GI P+ ITYS++I G C
Sbjct: 313 LQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
+ A+ + M +P+ T N LID Y
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/152 (26%), Positives = 80/152 (52%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P +V F L+ +V +++P+ + L+ ++ + + + +F + K C AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
+ + P+VV ++T+L LC + +S+A+ LF +M RP+V+T++T++ G+C
Sbjct: 137 FGKITKLG-LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLC 195
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G +A LL M+E+ + P T ++D
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227
>emb|CAD61285.1| fertility restorer [Raphanus sativus] gi|32452380|emb|CAD80165.1|
restorer of fertility pentatricopeptide repeat [Raphanus
sativus] gi|32527602|gb|AAP86198.1| pentatricopeptide
repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 165 bits (418), Expect = 5e-39
Identities = 82/155 (52%), Positives = 109/155 (70%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+P++VTF TL+NGL + +AV L R+++ G QPT +T+GTI +C+ GD AL
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 287 LLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGM 108
LLR ME SH++PNVVIYS I+DSLCKDG S A LF EM+ KGI PD+ TY+++I G
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 107 CTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
C+ G W+DA+ LL EMLE KI+PD T N LI+ +
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Score = 91.7 bits (226), Expect = 9e-17
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+++TFNTLI+G + + ++L H + + G T+ T+ GD A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEM-KSK----------GIR 147
L LL+ M S S + P++V T+LD LC +G L A+ +F M KSK G+
Sbjct: 450 LDLLQEMIS-SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
PDV TY+ +I G+ G + +A+ L EM I PD T + +ID
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/149 (32%), Positives = 83/149 (55%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G +PD+ T+N LI+GL++ + +A +L+ + G P +T+ ++ LC+ A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
++ +M S S PNVV ++T+++ CK G + + LF EM +GI + ITY T+I
Sbjct: 566 TQMFDSMGSKSF-SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRT 27
G +G+ N A + EM+ + + PD T
Sbjct: 625 GFRKVGNINGALDIFQEMISSGVYPDTIT 653
Score = 87.0 bits (214), Expect = 2e-15
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G D T+NTLI+G V N A+DL ++ G P +VT T+ LC G A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Query: 293 LKLLRNMESH------SH----VMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRP 144
L++ + M+ SH V P+V Y+ ++ L +G +A L+ EM +GI P
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Query: 143 DVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
D ITYS++I G+C ++A + M +P+ T LI+ Y
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Score = 83.2 bits (204), Expect = 3e-14
Identities = 48/154 (31%), Positives = 78/154 (50%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD+ T+N++I G S + + A L +++ P +VT+ + + + G A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L M ++PN + YS+++D CK L A +F M +KG P++IT++T+I
Sbjct: 345 EELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G C +D LL EM E + D T N LI
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Score = 83.2 bits (204), Expect = 3e-14
Identities = 45/152 (29%), Positives = 77/152 (50%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
PD+VT+N LIN V + +A +L+ ++ G P +T+ ++ C+ A +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
M + PN++ ++T++D C + + L EM G+ D TY+T+I G
Sbjct: 383 FYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
+G N A LL EM+ + + PD TC+ L+D
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Score = 77.4 bits (189), Expect = 2e-12
Identities = 45/154 (29%), Positives = 83/154 (53%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P++V ++ +I+ L + + A +L+ + + G P L T+ ++ C +G + A +L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
L+ M + P+VV Y+ ++++ K+G +A L+ EM +GI P+ ITYS++I G C
Sbjct: 313 LQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
+ A+ + M +P+ T N LID Y
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/152 (25%), Positives = 79/152 (51%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P +V F L+ +V +++P+ + L+ ++ + + + +F + K C AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
+ + P+VV ++T+L LC + +S+A+ F +M RP+V+T++T++ G+C
Sbjct: 137 FGKITKLG-LHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLC 195
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G +A LL M+E+ + P T ++D
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227
>gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 165 bits (418), Expect = 5e-39
Identities = 82/155 (52%), Positives = 109/155 (70%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+P++VTF TL+NGL + +AV L R+++ G QPT +T+GTI +C+ GD AL
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 287 LLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGM 108
LLR ME SH++PNVVIYS I+DSLCKDG S A LF EM+ KGI PD+ TY+++I G
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 107 CTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
C+ G W+DA+ LL EMLE KI+PD T N LI+ +
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Score = 96.3 bits (238), Expect = 4e-18
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD+ TF TLI+G + + ++L H + + G VT+ T+ C GD A
Sbjct: 390 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 449
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEM-KSK----------GIR 147
L L + M S S V P++V +T+LD LC +G L A+ +F M KSK G+
Sbjct: 450 LDLSQQMIS-SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVE 508
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
PDV+TY+ +I G+ G + +A+ L EM I PD T + +ID
Sbjct: 509 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Score = 89.7 bits (221), Expect = 4e-16
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 10/167 (5%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G + VT+NTLI+G V N A+DL +++ G P +VT T+ LC G A
Sbjct: 425 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 484
Query: 293 LKLLRNMESH------SH----VMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRP 144
L++ + M+ SH V P+V+ Y+ ++ L +G +A L+ EM +GI P
Sbjct: 485 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 544
Query: 143 DVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
D ITYS++I G+C ++A + M +P+ T N LI+ Y
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGY 591
Score = 88.2 bits (217), Expect = 1e-15
Identities = 48/149 (32%), Positives = 82/149 (55%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G +PD++T+N LI GL++ + +A +L+ + G P +T+ ++ LC+ A
Sbjct: 506 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
++ +M S S PNVV ++T+++ CK G + + LF EM +GI D I Y T+I
Sbjct: 566 TQMFVSMGSKSF-SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIY 624
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRT 27
G +G+ N A + EM+ + + PD T
Sbjct: 625 GFRKVGNINGALDIFQEMISSGVYPDTIT 653
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/152 (28%), Positives = 80/152 (52%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
PD+VT+N LIN V + +A +L+ ++ G P +T+ ++ C+ D A +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ-DRLDAAED 381
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
+ + + P+V ++T++D C + + L EM +G+ + +TY+T+I G C
Sbjct: 382 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 441
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
+G N A L +M+ + + PD TCN L+D
Sbjct: 442 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473
Score = 83.2 bits (204), Expect = 3e-14
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKL-----------GFQPTLVTFGTICK 327
G PDIVT NTL++GL + A++++ + K G +P ++T+ +
Sbjct: 460 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 519
Query: 326 SLCRTGDNAGALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIR 147
L G A +L M H ++P+ + YS+++D LCK L +A +F M SK
Sbjct: 520 GLINEGKFLEAEELYEEMP-HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFS 578
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPD 36
P+V+T++T+I G C G +D L EM I D
Sbjct: 579 PNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 615
Score = 79.0 bits (193), Expect = 6e-13
Identities = 46/154 (29%), Positives = 76/154 (49%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD+ T+N++I G S + + A L +++ P +VT+ + + + G A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L M ++PN + Y++++D CK L A +F M +KG PDV T++T+I
Sbjct: 345 AELYDEMLPRG-IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 403
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G C +D LL EM + + T N LI
Sbjct: 404 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 437
Score = 75.9 bits (185), Expect = 5e-12
Identities = 44/154 (28%), Positives = 82/154 (53%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P++V ++ +I+ L + + A +L+ + + G P L T+ ++ C +G + A +L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
L+ M + P+VV Y+ ++++ K+G +A L+ EM +GI P+ ITY+++I G C
Sbjct: 313 LQEMLERK-ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC 371
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
+ A+ + M +PD T LID Y
Sbjct: 372 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGY 405
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/152 (25%), Positives = 79/152 (51%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P +V F L+ +V +++P+ + L+ ++ + + + +F + K C AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
+ + P+VV ++T+L LC + +S+A+ F +M RP+V+T++T++ G+C
Sbjct: 137 FGKITKLG-LHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLC 195
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G +A LL M+E+ + P T ++D
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227
Score = 70.1 bits (170), Expect = 3e-10
Identities = 41/133 (30%), Positives = 70/133 (52%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD +T++++I+GL + ++A ++ + F P +VTF T+ C+ G
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 600
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L+L M ++ + +IY T++ K G ++ A+ +F EM S G+ PD IT IR
Sbjct: 601 LELFCEMGRRG-IVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTIT----IR 655
Query: 113 GMCTLGHWNDAQL 75
M T G W+ +L
Sbjct: 656 NMLT-GFWSKEEL 667
>dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 165 bits (418), Expect = 5e-39
Identities = 82/155 (52%), Positives = 109/155 (70%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+P++VTF TL+NGL + +AV L R+++ G QPT +T+GTI +C+ GD AL
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 287 LLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGM 108
LLR ME SH++PNVVIYS I+DSLCKDG S A LF EM+ KGI PD+ TY+++I G
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 107 CTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
C+ G W+DA+ LL EMLE KI+PD T N LI+ +
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Score = 91.7 bits (226), Expect = 9e-17
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+++TFNTLI+G + + ++L H + + G T+ T+ GD A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEM-KSK----------GIR 147
L LL+ M S S + P++V T+LD LC +G L A+ +F M KSK G+
Sbjct: 450 LDLLQEMIS-SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
PDV TY+ +I G+ G + +A+ L EM I PD T + +ID
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/149 (32%), Positives = 83/149 (55%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G +PD+ T+N LI+GL++ + +A +L+ + G P +T+ ++ LC+ A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
++ +M S S PNVV ++T+++ CK G + + LF EM +GI + ITY T+I
Sbjct: 566 TQMFDSMGSKSF-SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRT 27
G +G+ N A + EM+ + + PD T
Sbjct: 625 GFRKVGNINGALDIFQEMISSGVYPDTIT 653
Score = 87.0 bits (214), Expect = 2e-15
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G D T+NTLI+G V N A+DL ++ G P +VT T+ LC G A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Query: 293 LKLLRNMESH------SH----VMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRP 144
L++ + M+ SH V P+V Y+ ++ L +G +A L+ EM +GI P
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Query: 143 DVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
D ITYS++I G+C ++A + M +P+ T LI+ Y
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Score = 83.2 bits (204), Expect = 3e-14
Identities = 48/154 (31%), Positives = 78/154 (50%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD+ T+N++I G S + + A L +++ P +VT+ + + + G A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L M ++PN + YS+++D CK L A +F M +KG P++IT++T+I
Sbjct: 345 EELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G C +D LL EM E + D T N LI
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Score = 83.2 bits (204), Expect = 3e-14
Identities = 45/152 (29%), Positives = 77/152 (50%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
PD+VT+N LIN V + +A +L+ ++ G P +T+ ++ C+ A +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
M + PN++ ++T++D C + + L EM G+ D TY+T+I G
Sbjct: 383 FYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
+G N A LL EM+ + + PD TC+ L+D
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Score = 77.4 bits (189), Expect = 2e-12
Identities = 45/154 (29%), Positives = 83/154 (53%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P++V ++ +I+ L + + A +L+ + + G P L T+ ++ C +G + A +L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
L+ M + P+VV Y+ ++++ K+G +A L+ EM +GI P+ ITYS++I G C
Sbjct: 313 LQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
+ A+ + M +P+ T N LID Y
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405
Score = 75.1 bits (183), Expect = 9e-12
Identities = 40/152 (26%), Positives = 80/152 (52%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P +V F L+ +V +++P+ + L+ ++ + + + +F + K C AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
+ + P+VV ++T+L LC + +S+A+ LF +M RP+V+T++T++ G+C
Sbjct: 137 FGKLTKLG-LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLC 195
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G +A LL M+E+ + P T ++D
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227
>gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 165 bits (418), Expect = 5e-39
Identities = 82/155 (52%), Positives = 109/155 (70%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+P++VTF TL+NGL + +AV L R+++ G QPT +T+GTI +C+ GD AL
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 287 LLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGM 108
LLR ME SH++PNVVIYS I+DSLCKDG S A LF EM+ KGI PD+ TY+++I G
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 107 CTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
C+ G W+DA+ LL EMLE KI+PD T N LI+ +
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Score = 91.7 bits (226), Expect = 9e-17
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+++TFNTLI+G + + ++L H + + G T+ T+ GD A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEM-KSK----------GIR 147
L LL+ M S S + P++V T+LD LC +G L A+ +F M KSK G+
Sbjct: 450 LDLLQEMIS-SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
PDV TY+ +I G+ G + +A+ L EM I PD T + +ID
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/149 (32%), Positives = 83/149 (55%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G +PD+ T+N LI+GL++ + +A +L+ + G P +T+ ++ LC+ A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
++ +M S S PNVV ++T+++ CK G + + LF EM +GI + ITY T+I
Sbjct: 566 TQMFDSMGSKSF-SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRT 27
G +G+ N A + EM+ + + PD T
Sbjct: 625 GFRKVGNINGALDIFQEMISSGVYPDTIT 653
Score = 87.0 bits (214), Expect = 2e-15
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G D T+NTLI+G V N A+DL ++ G P +VT T+ LC G A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Query: 293 LKLLRNMESH------SH----VMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRP 144
L++ + M+ SH V P+V Y+ ++ L +G +A L+ EM +GI P
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Query: 143 DVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
D ITYS++I G+C ++A + M +P+ T LI+ Y
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Score = 83.2 bits (204), Expect = 3e-14
Identities = 48/154 (31%), Positives = 78/154 (50%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD+ T+N++I G S + + A L +++ P +VT+ + + + G A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L M ++PN + YS+++D CK L A +F M +KG P++IT++T+I
Sbjct: 345 EELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G C +D LL EM E + D T N LI
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Score = 83.2 bits (204), Expect = 3e-14
Identities = 45/152 (29%), Positives = 77/152 (50%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
PD+VT+N LIN V + +A +L+ ++ G P +T+ ++ C+ A +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
M + PN++ ++T++D C + + L EM G+ D TY+T+I G
Sbjct: 383 FYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
+G N A LL EM+ + + PD TC+ L+D
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Score = 77.4 bits (189), Expect = 2e-12
Identities = 45/154 (29%), Positives = 83/154 (53%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P++V ++ +I+ L + + A +L+ + + G P L T+ ++ C +G + A +L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
L+ M + P+VV Y+ ++++ K+G +A L+ EM +GI P+ ITYS++I G C
Sbjct: 313 LQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
+ A+ + M +P+ T N LID Y
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/152 (26%), Positives = 80/152 (52%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P +V F L+ +V +++P+ + L+ ++ + + + +F + K C AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
+ + P+VV ++T+L LC + +S+A+ LF +M RP+V+T++T++ G+C
Sbjct: 137 FGKITKLG-LHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLC 195
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G +A LL M+E+ + P T ++D
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227
>dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 165 bits (417), Expect = 7e-39
Identities = 82/155 (52%), Positives = 109/155 (70%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+P++VTF TL+NGL + +AV L R+++ G QPT +T+GTI +C+ GD AL
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALD 240
Query: 287 LLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGM 108
LLR ME SH++PNVVIYS I+DSLCKDG S A LF EM+ KGI PD+ TY+++I G
Sbjct: 241 LLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 107 CTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
C+ G W+DA+ LL EMLE KI+PD T N LI+ +
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Score = 91.7 bits (226), Expect = 9e-17
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+++TFNTLI+G + + ++L H + + G T+ T+ GD A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEM-KSK----------GIR 147
L LL+ M S S + P++V T+LD LC +G L A+ +F M KSK G+
Sbjct: 450 LDLLQEMIS-SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
PDV TY+ +I G+ G + +A+ L EM I PD T + +ID
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/149 (32%), Positives = 83/149 (55%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G +PD+ T+N LI+GL++ + +A +L+ + G P +T+ ++ LC+ A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
++ +M S S PNVV ++T+++ CK G + + LF EM +GI + ITY T+I
Sbjct: 566 TQMFDSMGSKSF-SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRT 27
G +G+ N A + EM+ + + PD T
Sbjct: 625 GFRKVGNINGALDIFQEMISSGVYPDTIT 653
Score = 87.0 bits (214), Expect = 2e-15
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G D T+NTLI+G V N A+DL ++ G P +VT T+ LC G A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Query: 293 LKLLRNMESH------SH----VMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRP 144
L++ + M+ SH V P+V Y+ ++ L +G +A L+ EM +GI P
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Query: 143 DVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
D ITYS++I G+C ++A + M +P+ T LI+ Y
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Score = 83.2 bits (204), Expect = 3e-14
Identities = 48/154 (31%), Positives = 78/154 (50%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD+ T+N++I G S + + A L +++ P +VT+ + + + G A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L M ++PN + YS+++D CK L A +F M +KG P++IT++T+I
Sbjct: 345 EELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G C +D LL EM E + D T N LI
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Score = 83.2 bits (204), Expect = 3e-14
Identities = 45/152 (29%), Positives = 77/152 (50%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
PD+VT+N LIN V + +A +L+ ++ G P +T+ ++ C+ A +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
M + PN++ ++T++D C + + L EM G+ D TY+T+I G
Sbjct: 383 FYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
+G N A LL EM+ + + PD TC+ L+D
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Score = 77.4 bits (189), Expect = 2e-12
Identities = 45/154 (29%), Positives = 83/154 (53%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P++V ++ +I+ L + + A +L+ + + G P L T+ ++ C +G + A +L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
L+ M + P+VV Y+ ++++ K+G +A L+ EM +GI P+ ITYS++I G C
Sbjct: 313 LQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
+ A+ + M +P+ T N LID Y
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/152 (26%), Positives = 80/152 (52%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P +V F L+ +V +++P+ + L+ ++ + + + +F + K C AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
+ + P+VV ++T+L LC + +S+A+ LF +M RP+V+T++T++ G+C
Sbjct: 137 FGKITKLG-LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLC 195
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G +A LL M+E+ + P T ++D
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227
>gb|EOY09749.1| ATP binding,nucleic acid binding,helicases, putative [Theobroma
cacao]
Length = 626
Score = 159 bits (401), Expect = 5e-37
Identities = 74/156 (47%), Positives = 111/156 (71%)
Frame = -2
Query: 476 LGYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAG 297
LG QP+++TF+TLINGL V + +AV L++ +V+ G+QP L+++ TI LC+ GD +G
Sbjct: 164 LGLQPNVITFSTLINGLCIVSKVARAVMLFNDMVREGYQPNLISYSTIVNGLCKIGDTSG 223
Query: 296 ALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTII 117
A++LLR ME PN+V Y+TI+DSLCKD +++A+ L +EM+ KGI +++TYS++I
Sbjct: 224 AIRLLRMMEQRG-CAPNIVTYTTIIDSLCKDENVTEALKLLSEMRGKGIPSNIVTYSSLI 282
Query: 116 RGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
MC LG W + LL EM+ N + P+ TCNIL+D
Sbjct: 283 HAMCNLGQWKEVTSLLKEMVANNVMPNVVTCNILLD 318
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/154 (27%), Positives = 84/154 (54%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+IV++N L +G + ++A++L+H + GF P +VT+ + +C G + A
Sbjct: 375 GCAPNIVSYNALFSGYCKAKRVDEAMNLFHEISDKGFIPDVVTYTILINGMCEIGRLSAA 434
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L + M ++ + P+ + YS +LD LCK G + +A+ F M + G+ P + YS ++
Sbjct: 435 QELFKEMSANGQI-PDQMTYSALLDGLCKHGHVHEALEFFQAMHNSGLEPSIFHYSILLD 493
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G+C + + A+ L ++ + P+ I+I
Sbjct: 494 GLCQVREFKLARQLFRQIFAKALHPNIYVYTIMI 527
Score = 90.1 bits (222), Expect = 3e-16
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 34/191 (17%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
GYQP++++++T++NGL + + A+ L + + G P +VT+ TI SLC+ + A
Sbjct: 200 GYQPNLISYSTIVNGLCKIGDTSGAIRLLRMMEQRGCAPNIVTYTTIIDSLCKDENVTEA 259
Query: 293 LKLLRNMESH----------------------------------SHVMPNVVIYSTILDS 216
LKLL M ++VMPNVV + +LD+
Sbjct: 260 LKLLSEMRGKGIPSNIVTYSSLIHAMCNLGQWKEVTSLLKEMVANNVMPNVVTCNILLDA 319
Query: 215 LCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPD 36
LCK+GL+S+A + +M +G+ D++TY+T++ C +A+ + ++ P+
Sbjct: 320 LCKEGLVSEAHDVVKKMSQEGVGSDIVTYNTLMDSCCLRSEIYEARKIFDLLVGRGCAPN 379
Query: 35 NRTCNILIDMY 3
+ N L Y
Sbjct: 380 IVSYNALFSGY 390
Score = 87.8 bits (216), Expect = 1e-15
Identities = 49/152 (32%), Positives = 79/152 (51%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P++VT N L++ L ++A D+ ++ + G +VT+ T+ S C + A K+
Sbjct: 308 PNVVTCNILLDALCKEGLVSEAHDVVKKMSQEGVGSDIVTYNTLMDSCCLRSEIYEARKI 367
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
+ PN+V Y+ + CK + +A+ LF E+ KG PDV+TY+ +I GMC
Sbjct: 368 FDLLVGRG-CAPNIVSYNALFSGYCKAKRVDEAMNLFHEISDKGFIPDVVTYTILINGMC 426
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
+G + AQ L EM N PD T + L+D
Sbjct: 427 EIGRLSAAQELFKEMSANGQIPDQMTYSALLD 458
Score = 77.8 bits (190), Expect = 1e-12
Identities = 45/155 (29%), Positives = 79/155 (50%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G DIVT+NTL++ + +A ++ +V G P +V++ + C+ A
Sbjct: 340 GVGSDIVTYNTLMDSCCLRSEIYEARKIFDLLVGRGCAPNIVSYNALFSGYCKAKRVDEA 399
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+ L + + P+VV Y+ +++ +C+ G LS A LF EM + G PD +TYS ++
Sbjct: 400 MNLFHEISDKGFI-PDVVTYTILINGMCEIGRLSAAQELFKEMSANGQIPDQMTYSALLD 458
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G+C GH ++A M + + P +IL+D
Sbjct: 459 GLCKHGHVHEALEFFQAMHNSGLEPSIFHYSILLD 493
Score = 74.3 bits (181), Expect = 2e-11
Identities = 43/154 (27%), Positives = 82/154 (53%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G+ PD+VT+ LING+ + + + A +L+ + G P +T+ + LC+ G A
Sbjct: 410 GFIPDVVTYTILINGMCEIGRLSAAQELFKEMSANGQIPDQMTYSALLDGLCKHGHVHEA 469
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L+ + M + S + P++ YS +LD LC+ A LF ++ +K + P++ Y+ +I+
Sbjct: 470 LEFFQAMHN-SGLEPSIFHYSILLDGLCQVREFKLARQLFRQIFAKALHPNIYVYTIMIK 528
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
+ G N+AQ L +M E ++ + N ++
Sbjct: 529 ALFEEGLPNEAQELFRKMEEGGCLANSCSYNTMV 562
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/155 (22%), Positives = 83/155 (53%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD +T++ L++GL ++A++ + + G +P++ + + LC+ + A
Sbjct: 445 GQIPDQMTYSALLDGLCKHGHVHEALEFFQAMHNSGLEPSIFHYSILLDGLCQVREFKLA 504
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L R + + + + PN+ +Y+ ++ +L ++GL ++A LF +M+ G + +Y+T+++
Sbjct: 505 RQLFRQIFAKA-LHPNIYVYTIMIKALFEEGLPNEAQELFRKMEEGGCLANSCSYNTMVQ 563
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G + +L EM++ + D +L+D
Sbjct: 564 GFLQNNDMSSVMQILHEMVDKGFSLDAPMAVMLVD 598
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/127 (25%), Positives = 66/127 (51%)
Frame = -2
Query: 416 DQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKLLRNMESHSHVMPNVVI 237
D +A+ L++R++ +P+++ F + ++ R D A+ L+R ME + NV
Sbjct: 79 DNIGEALTLFNRMIHSHPRPSIIEFSRLLGAVVRIKDYVTAVSLIRQMELLG-IQHNVYT 137
Query: 236 YSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMCTLGHWNDAQLLLTEML 57
+ +++ C + +L +M G++P+VIT+ST+I G+C + A +L +M+
Sbjct: 138 LTILINCFCHLQCVDFGFSLLGKMFKLGLQPNVITFSTLINGLCIVSKVARAVMLFNDMV 197
Query: 56 ENKITPD 36
P+
Sbjct: 198 REGYQPN 204
>gb|EOY11598.1| ATP binding,nucleic acid binding,helicases, putative [Theobroma
cacao]
Length = 559
Score = 157 bits (396), Expect = 2e-36
Identities = 75/158 (47%), Positives = 108/158 (68%)
Frame = -2
Query: 476 LGYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAG 297
LG QPD TFNTL+NGL + +AV L+ +V+ G QP L+T+GT+ LC+ G G
Sbjct: 127 LGIQPDTTTFNTLVNGLCVEGKIAEAVILFDGIVRNGCQPDLITYGTVMNGLCKIGYTTG 186
Query: 296 ALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTII 117
A++LLRNM+ S ++PN V Y+T +D LCKD L+ +A+ L +EM+ KGI PDV+TY++ I
Sbjct: 187 AIRLLRNMKQ-SGIVPNTVTYNTTIDCLCKDKLVPEALNLLSEMRGKGIPPDVVTYNSFI 245
Query: 116 RGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
MC+LG WN+ LLTEM+ N P+ + +IL+D +
Sbjct: 246 HAMCSLGQWNEVMRLLTEMVANNCKPNIVSYSILVDAF 283
Score = 86.7 bits (213), Expect = 3e-15
Identities = 48/159 (30%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLG-----FQPTLVTFGTICKSLCRTG 309
G D +T+N L++G + ++A + + ++ G + P VT+ + +C+ G
Sbjct: 303 GVDSDTITYNALMDGYCLQGKMDEARKILNLMITKGCVPNVYVPNTVTYTALINGMCQVG 362
Query: 308 DNAGALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITY 129
A +L + M + ++PN V YST+L LCK G + +A LF M+S GI +++ Y
Sbjct: 363 RLGAARELHKEMSARG-LVPNTVTYSTLLHGLCKHGHVHEAAELFHVMQSNGIEANIVHY 421
Query: 128 STIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
S +I G+C +G N A+ L + + P+ TC+I+I
Sbjct: 422 SILIDGLCQVGQLNVARKLFHSLPGKGLHPNVYTCDIMI 460
Score = 84.3 bits (207), Expect = 2e-14
Identities = 51/153 (33%), Positives = 80/153 (52%)
Frame = -2
Query: 470 YQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGAL 291
Y P+ VT+ LING+ V + A +L + G P VT+ T+ LC+ G A
Sbjct: 344 YVPNTVTYTALINGMCQVGRLGAARELHKEMSARGLVPNTVTYSTLLHGLCKHGHVHEAA 403
Query: 290 KLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRG 111
+L M+S+ + N+V YS ++D LC+ G L+ A LF + KG+ P+V T +I+
Sbjct: 404 ELFHVMQSNG-IEANIVHYSILIDGLCQVGQLNVARKLFHSLPGKGLHPNVYTCDIMIKV 462
Query: 110 MCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
+C G N+A L +M N D+ + N +I
Sbjct: 463 LCKEGLPNEAYDLFRKMEVNGCLQDSCSYNTMI 495
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/157 (28%), Positives = 84/157 (53%), Gaps = 4/157 (2%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+P+IV+++ L++ + + ++A D+ +++ G +T+ + C G A K
Sbjct: 270 KPNIVSYSILVDAFCTEGRVSEACDIVEGMIRRGVDSDTITYNALMDGYCLQGKMDEARK 329
Query: 287 LLRNMESHSHV----MPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTI 120
+L M + V +PN V Y+ +++ +C+ G L A L EM ++G+ P+ +TYST+
Sbjct: 330 ILNLMITKGCVPNVYVPNTVTYTALINGMCQVGRLGAARELHKEMSARGLVPNTVTYSTL 389
Query: 119 IRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
+ G+C GH ++A L M N I + +ILID
Sbjct: 390 LHGLCKHGHVHEAAELFHVMQSNGIEANIVHYSILID 426
Score = 77.0 bits (188), Expect = 2e-12
Identities = 43/156 (27%), Positives = 82/156 (52%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+ VT++TL++GL ++A +L+H + G + +V + + LC+ G A
Sbjct: 378 GLVPNTVTYSTLLHGLCKHGHVHEAAELFHVMQSNGIEANIVHYSILIDGLCQVGQLNVA 437
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
KL ++ + PNV ++ LCK+GL ++A LF +M+ G D +Y+T+I+
Sbjct: 438 RKLFHSLPGKG-LHPNVYTCDIMIKVLCKEGLPNEAYDLFRKMEVNGCLQDSCSYNTMIK 496
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDM 6
G + A +L EM++ + + T +++D+
Sbjct: 497 GFFQNNDVSRAVQILHEMVDKGFSAGSSTATMVVDL 532
>gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 156 bits (394), Expect = 3e-36
Identities = 76/158 (48%), Positives = 111/158 (70%)
Frame = -2
Query: 476 LGYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAG 297
LGY+PD TFNTLI GL + ++AV L R+V+ G QP +VT+ +I +CR+GD +
Sbjct: 142 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 201
Query: 296 ALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTII 117
AL LLR ME + V +V YSTI+DSLC+DG + AI+LF EM++KGI+ V+TY++++
Sbjct: 202 ALDLLRKMEERN-VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 260
Query: 116 RGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
RG+C G WND LLL +M+ +I P+ T N+L+D++
Sbjct: 261 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298
Score = 97.4 bits (241), Expect = 2e-18
Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 34/191 (17%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G QPD+VT+N+++NG+ + A+DL ++ + + + T+ TI SLCR G A
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237
Query: 293 LKLLRNMESHS----------------------------------HVMPNVVIYSTILDS 216
+ L + ME+ ++PNV+ ++ +LD
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297
Query: 215 LCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPD 36
K+G L +A L+ EM ++GI P++ITY+T++ G C ++A +L M+ NK +PD
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 357
Query: 35 NRTCNILIDMY 3
T LI Y
Sbjct: 358 IVTFTSLIKGY 368
Score = 93.6 bits (231), Expect = 2e-17
Identities = 48/154 (31%), Positives = 88/154 (57%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G + VT++ L+ G + A +L+ +V G P ++T+G + LC G A
Sbjct: 388 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 447
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L++ +++ S + +V+Y+TI++ +CK G + A LF + KG++P+V+TY+ +I
Sbjct: 448 LEIFEDLQK-SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 506
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G+C G ++A +LL +M E+ P++ T N LI
Sbjct: 507 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 540
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/143 (30%), Positives = 79/143 (55%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+I+T+NTL++G ++ ++A ++ +V+ P +VTF ++ K C
Sbjct: 318 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 377
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+K+ RN+ S ++ N V YS ++ C+ G + A LF EM S G+ PDV+TY ++
Sbjct: 378 MKVFRNI-SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 436
Query: 113 GMCTLGHWNDAQLLLTEMLENKI 45
G+C G A + ++ ++K+
Sbjct: 437 GLCDNGKLEKALEIFEDLQKSKM 459
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/152 (23%), Positives = 79/152 (51%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P+++TFN L++ V + +A +L+ ++ G P ++T+ T+ C + A +
Sbjct: 286 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 345
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
L ++ + P++V +++++ C + + +F + +G+ + +TYS +++G C
Sbjct: 346 L-DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 404
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G A+ L EM+ + + PD T IL+D
Sbjct: 405 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 436
Score = 75.1 bits (183), Expect = 9e-12
Identities = 45/156 (28%), Positives = 80/156 (51%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD++T+ L++GL + +A++++ + K +V + TI + +C+ G A
Sbjct: 423 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 482
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L ++ V PNV+ Y+ ++ LCK G LS+A L +M+ G P+ TY+T+IR
Sbjct: 483 WNLFCSLPCKG-VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 541
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDM 6
G + L+ EM + D + ++IDM
Sbjct: 542 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 577
Score = 70.5 bits (171), Expect = 2e-10
Identities = 37/154 (24%), Positives = 75/154 (48%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G + +VT+N+L+ GL + N L +V P ++TF + + G A
Sbjct: 248 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 307
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L + M + + PN++ Y+T++D C LS+A + M PD++T++++I+
Sbjct: 308 NELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 366
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G C + +D + + + + + T +IL+
Sbjct: 367 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 400
>ref|NP_172730.3| RNA processing factor1 [Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| RNA processing factor1
[Arabidopsis thaliana]
Length = 735
Score = 156 bits (394), Expect = 3e-36
Identities = 76/158 (48%), Positives = 111/158 (70%)
Frame = -2
Query: 476 LGYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAG 297
LGY+PD TFNTLI GL + ++AV L R+V+ G QP +VT+ +I +CR+GD +
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211
Query: 296 ALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTII 117
AL LLR ME + V +V YSTI+DSLC+DG + AI+LF EM++KGI+ V+TY++++
Sbjct: 212 ALDLLRKMEERN-VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 116 RGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
RG+C G WND LLL +M+ +I P+ T N+L+D++
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Score = 97.4 bits (241), Expect = 2e-18
Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 34/191 (17%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G QPD+VT+N+++NG+ + A+DL ++ + + + T+ TI SLCR G A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 293 LKLLRNMESHS----------------------------------HVMPNVVIYSTILDS 216
+ L + ME+ ++PNV+ ++ +LD
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 215 LCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPD 36
K+G L +A L+ EM ++GI P++ITY+T++ G C ++A +L M+ NK +PD
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 35 NRTCNILIDMY 3
T LI Y
Sbjct: 368 IVTFTSLIKGY 378
Score = 93.6 bits (231), Expect = 2e-17
Identities = 48/154 (31%), Positives = 88/154 (57%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G + VT++ L+ G + A +L+ +V G P ++T+G + LC G A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L++ +++ S + +V+Y+TI++ +CK G + A LF + KG++P+V+TY+ +I
Sbjct: 458 LEIFEDLQK-SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G+C G ++A +LL +M E+ P++ T N LI
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/143 (30%), Positives = 79/143 (55%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+I+T+NTL++G ++ ++A ++ +V+ P +VTF ++ K C
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+K+ RN+ S ++ N V YS ++ C+ G + A LF EM S G+ PDV+TY ++
Sbjct: 388 MKVFRNI-SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 113 GMCTLGHWNDAQLLLTEMLENKI 45
G+C G A + ++ ++K+
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKM 469
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/152 (23%), Positives = 79/152 (51%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P+++TFN L++ V + +A +L+ ++ G P ++T+ T+ C + A +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
L ++ + P++V +++++ C + + +F + +G+ + +TYS +++G C
Sbjct: 356 L-DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G A+ L EM+ + + PD T IL+D
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Score = 75.1 bits (183), Expect = 9e-12
Identities = 45/156 (28%), Positives = 80/156 (51%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD++T+ L++GL + +A++++ + K +V + TI + +C+ G A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L ++ V PNV+ Y+ ++ LCK G LS+A L +M+ G P+ TY+T+IR
Sbjct: 493 WNLFCSLPCKG-VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDM 6
G + L+ EM + D + ++IDM
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Score = 70.5 bits (171), Expect = 2e-10
Identities = 37/154 (24%), Positives = 75/154 (48%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G + +VT+N+L+ GL + N L +V P ++TF + + G A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L + M + + PN++ Y+T++D C LS+A + M PD++T++++I+
Sbjct: 318 NELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G C + +D + + + + + T +IL+
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
>emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 156 bits (394), Expect = 3e-36
Identities = 75/158 (47%), Positives = 111/158 (70%)
Frame = -2
Query: 476 LGYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAG 297
LGY+PD TFNTLINGL + ++AV L R+V+ G QP +VT+ +I +CR+GD +
Sbjct: 152 LGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSL 211
Query: 296 ALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTII 117
A +LR ME + V +V YSTI+DSLC+DG + AI+LF EM++KGI+ V+TY++++
Sbjct: 212 AFDMLRKMEERN-VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 116 RGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
RG+C G WND LLL +M+ +I P+ T N+L+D++
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Score = 95.1 bits (235), Expect = 9e-18
Identities = 53/154 (34%), Positives = 93/154 (60%), Gaps = 1/154 (0%)
Frame = -2
Query: 461 DIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGD-NAGALKL 285
D+ T++T+I+ L + A+ L+ + G + ++VT+ ++ + LC+ G N GAL L
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-L 285
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
L++M S ++PNV+ ++ +LD K+G L +A L+ EM ++GI P++ITY+T++ G C
Sbjct: 286 LKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
++A +L M+ NK +PD T LI Y
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Score = 93.6 bits (231), Expect = 2e-17
Identities = 48/154 (31%), Positives = 88/154 (57%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G + VT++ L+ G + A +L+ +V G P ++T+G + LC G A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L++ +++ S + +V+Y+TI++ +CK G + A LF + KG++P+V+TY+ +I
Sbjct: 458 LEIFEDLQK-SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G+C G ++A +LL +M E+ P++ T N LI
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/143 (30%), Positives = 79/143 (55%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+I+T+NTL++G ++ ++A ++ +V+ P +VTF ++ K C
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+K+ RN+ S ++ N V YS ++ C+ G + A LF EM S G+ PDV+TY ++
Sbjct: 388 MKVFRNI-SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 113 GMCTLGHWNDAQLLLTEMLENKI 45
G+C G A + ++ ++K+
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKM 469
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/152 (23%), Positives = 79/152 (51%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P+++TFN L++ V + +A +L+ ++ G P ++T+ T+ C + A +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
L ++ + P++V +++++ C + + +F + +G+ + +TYS +++G C
Sbjct: 356 L-DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G A+ L EM+ + + PD T IL+D
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Score = 75.1 bits (183), Expect = 9e-12
Identities = 45/156 (28%), Positives = 80/156 (51%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD++T+ L++GL + +A++++ + K +V + TI + +C+ G A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L ++ V PNV+ Y+ ++ LCK G LS+A L +M+ G P+ TY+T+IR
Sbjct: 493 WNLFCSLPCKG-VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDM 6
G + L+ EM + D + ++IDM
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Score = 70.5 bits (171), Expect = 2e-10
Identities = 37/154 (24%), Positives = 75/154 (48%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G + +VT+N+L+ GL + N L +V P ++TF + + G A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L + M + + PN++ Y+T++D C LS+A + M PD++T++++I+
Sbjct: 318 NELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G C + +D + + + + + T +IL+
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Score = 55.1 bits (131), Expect = 1e-05
Identities = 34/144 (23%), Positives = 71/144 (49%)
Frame = -2
Query: 440 LINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKLLRNMESHS 261
L +G+V + + + A+ L+ +++ P LV F ++ RT L + +E +
Sbjct: 60 LRSGIVDIKK-DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNG 118
Query: 260 HVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMCTLGHWNDA 81
+ N+ + +++ C+ A ++ ++ G PD T++T+I G+C G + A
Sbjct: 119 -IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKA 177
Query: 80 QLLLTEMLENKITPDNRTCNILID 9
+L+ M+EN PD T N +++
Sbjct: 178 VVLVDRMVENGCQPDMVTYNSIVN 201
>sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 156 bits (394), Expect = 3e-36
Identities = 76/158 (48%), Positives = 111/158 (70%)
Frame = -2
Query: 476 LGYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAG 297
LGY+PD TFNTLI GL + ++AV L R+V+ G QP +VT+ +I +CR+GD +
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211
Query: 296 ALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTII 117
AL LLR ME + V +V YSTI+DSLC+DG + AI+LF EM++KGI+ V+TY++++
Sbjct: 212 ALDLLRKMEERN-VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 116 RGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
RG+C G WND LLL +M+ +I P+ T N+L+D++
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Score = 97.4 bits (241), Expect = 2e-18
Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 34/191 (17%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G QPD+VT+N+++NG+ + A+DL ++ + + + T+ TI SLCR G A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 293 LKLLRNMESHS----------------------------------HVMPNVVIYSTILDS 216
+ L + ME+ ++PNV+ ++ +LD
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 215 LCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPD 36
K+G L +A L+ EM ++GI P++ITY+T++ G C ++A +L M+ NK +PD
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 35 NRTCNILIDMY 3
T LI Y
Sbjct: 368 IVTFTSLIKGY 378
Score = 93.6 bits (231), Expect = 2e-17
Identities = 48/154 (31%), Positives = 88/154 (57%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G + VT++ L+ G + A +L+ +V G P ++T+G + LC G A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L++ +++ S + +V+Y+TI++ +CK G + A LF + KG++P+V+TY+ +I
Sbjct: 458 LEIFEDLQK-SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G+C G ++A +LL +M E+ P++ T N LI
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/143 (30%), Positives = 79/143 (55%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+I+T+NTL++G ++ ++A ++ +V+ P +VTF ++ K C
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+K+ RN+ S ++ N V YS ++ C+ G + A LF EM S G+ PDV+TY ++
Sbjct: 388 MKVFRNI-SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 113 GMCTLGHWNDAQLLLTEMLENKI 45
G+C G A + ++ ++K+
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKM 469
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/152 (23%), Positives = 79/152 (51%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P+++TFN L++ V + +A +L+ ++ G P ++T+ T+ C + A +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
L ++ + P++V +++++ C + + +F + +G+ + +TYS +++G C
Sbjct: 356 L-DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G A+ L EM+ + + PD T IL+D
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Score = 75.1 bits (183), Expect = 9e-12
Identities = 45/156 (28%), Positives = 80/156 (51%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD++T+ L++GL + +A++++ + K +V + TI + +C+ G A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L ++ V PNV+ Y+ ++ LCK G LS+A L +M+ G P+ TY+T+IR
Sbjct: 493 WNLFCSLPCKG-VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDM 6
G + L+ EM + D + ++IDM
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Score = 70.5 bits (171), Expect = 2e-10
Identities = 37/154 (24%), Positives = 75/154 (48%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G + +VT+N+L+ GL + N L +V P ++TF + + G A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L + M + + PN++ Y+T++D C LS+A + M PD++T++++I+
Sbjct: 318 NELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G C + +D + + + + + T +IL+
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
>emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 155 bits (393), Expect = 4e-36
Identities = 83/189 (43%), Positives = 112/189 (59%), Gaps = 31/189 (16%)
Frame = -2
Query: 476 LGYQPDIVTFNTLINGLVSVDQPNQAVDLWH----------------------------- 384
LG+QPD+VTF+TL++GL D+ ++A+DL+H
Sbjct: 141 LGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPNVVTFTTLMNGLCREGRVVEAVAL 200
Query: 383 --RVVKLGFQPTLVTFGTICKSLCRTGDNAGALKLLRNMESHSHVMPNVVIYSTILDSLC 210
R+V+ G QP +T+GTI +C+ GD AL LLR ME SH+ PNVVIYS I+D L
Sbjct: 201 LDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLW 260
Query: 209 KDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNR 30
KDG S A L+ EM+ KGI PD+ TY+ +I G C+ G W++AQ LL EMLE KI P+
Sbjct: 261 KDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVV 320
Query: 29 TCNILIDMY 3
T + LI+ Y
Sbjct: 321 TYSALINAY 329
Score = 92.0 bits (227), Expect = 7e-17
Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Frame = -2
Query: 461 DIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKLL 282
D+ +FN LI S + A+ + ++ KLGFQP +VTF T+ LC + AL L
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170
Query: 281 RNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMCT 102
H PNVV ++T+++ LC++G + +A+ L M G++P+ ITY TI+ GMC
Sbjct: 171 -----HQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 225
Query: 101 LGHWNDAQLLLTEMLE-NKITPDNRTCNILID 9
+G A LL +M E + I P+ + +ID
Sbjct: 226 IGDTVSALNLLRKMEEMSHIKPNVVIYSAIID 257
Score = 92.0 bits (227), Expect = 7e-17
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD+ TFNTLI+G + + +L H + + G T+ T+ C GD A
Sbjct: 384 GCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAA 443
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEM-KSK----------GIR 147
L L + M S S V P++V +T+LD LC +G L A+ +F M KSK G+
Sbjct: 444 LDLSQQMIS-SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVE 502
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
PDV TY+ +I G+ G + +A+ L EM I P+ T + +I+
Sbjct: 503 PDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMIN 548
Score = 90.1 bits (222), Expect = 3e-16
Identities = 48/154 (31%), Positives = 84/154 (54%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G +PD+ T+N LI+GL++ + +A +L+ + G P +T+ ++ LC+ A
Sbjct: 500 GVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEA 559
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
++ +M S S P+VV ++T++ CK G + + LF EM +GI D ITY T+I
Sbjct: 560 TQMFDSMGSKSF-SPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIH 618
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G +G+ N A + EM+ + + PD T ++
Sbjct: 619 GFRKVGNINGALDIFQEMISSGVYPDTITIRSML 652
Score = 89.0 bits (219), Expect = 6e-16
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G D T+NTLI+G V N A+DL +++ G P +VT T+ LC G A
Sbjct: 419 GLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 478
Query: 293 LKLLRNMESH----------SHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRP 144
L++ + M+ + V P+V Y+ ++ L +G +A L+ EM +GI P
Sbjct: 479 LEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVP 538
Query: 143 DVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
+ ITYS++I G+C ++A + M +PD T N L+ Y
Sbjct: 539 NTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGY 585
Score = 85.1 bits (209), Expect = 9e-15
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKL-----------GFQPTLVTFGTICK 327
G PDIVT NTL++GL + A++++ + K G +P + T+ +
Sbjct: 454 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILIS 513
Query: 326 SLCRTGDNAGALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIR 147
L G A +L + M H ++PN + YS++++ LCK L +A +F M SK
Sbjct: 514 GLINEGKFLEAEELYKEMP-HRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFS 572
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
PDV+T++T++ G C G +D L EM I D T LI
Sbjct: 573 PDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLI 617
Score = 81.3 bits (199), Expect = 1e-13
Identities = 47/154 (30%), Positives = 77/154 (50%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD+ T+N +I+G S + ++A L +++ P +VT+ + + + A
Sbjct: 279 GIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEA 338
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L M ++PN + Y++++D CK L A +F M +KG PDV T++T+I
Sbjct: 339 EELYDEMLPRG-IIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLID 397
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G C +D LL EM E + D T N LI
Sbjct: 398 GYCGAKRIDDGTELLHEMTETGLVADTTTYNTLI 431
Score = 79.7 bits (195), Expect = 4e-13
Identities = 47/155 (30%), Positives = 83/155 (53%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+P++V ++ +I+GL + + A +L+ + + G P L T+ + C +G + A +
Sbjct: 246 KPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQR 305
Query: 287 LLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGM 108
LL+ M + PNVV YS ++++ K+ +A L+ EM +GI P+ ITY+++I G
Sbjct: 306 LLQEMLERK-INPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGF 364
Query: 107 CTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
C + A+ + M +PD T N LID Y
Sbjct: 365 CKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGY 399
Score = 78.6 bits (192), Expect = 8e-13
Identities = 43/152 (28%), Positives = 75/152 (49%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P++VT++ LIN V + +A +L+ ++ G P +T+ ++ C+ A +
Sbjct: 317 PNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHM 376
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
M + P+V ++T++D C + L EM G+ D TY+T+I G C
Sbjct: 377 FYVMATKG-CSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFC 435
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
+G N A L +M+ + + PD TCN L+D
Sbjct: 436 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 467
>emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 155 bits (392), Expect = 5e-36
Identities = 77/155 (49%), Positives = 103/155 (66%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+PD++TF TL+NGL + +AV L R+V+ G QP +T+GT +C+ GD AL
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238
Query: 287 LLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGM 108
LLR ME SH+ PNVVIYS I+D LCKDG S + LF EM+ KGI P+++TY+ +I G
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298
Query: 107 CTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
C G W+ AQ LL EMLE KI+P+ T N LI+ +
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAF 333
Score = 96.3 bits (238), Expect = 4e-18
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD+ TF TLI+G + + ++L H + + G VT+ T+ C GD A
Sbjct: 388 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEM-KSK----------GIR 147
L L + M S S V P++V +T+LD LC +G L A+ +F M KSK G+
Sbjct: 448 LDLSQQMIS-SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVE 506
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
PDV+TY+ +I G+ G + +A+ L EM I PD T + +ID
Sbjct: 507 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552
Score = 89.7 bits (221), Expect = 4e-16
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 10/167 (5%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G + VT+NTLI+G V N A+DL +++ G P +VT T+ LC G A
Sbjct: 423 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 482
Query: 293 LKLLRNMESH------SH----VMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRP 144
L++ + M+ SH V P+V+ Y+ ++ L +G +A L+ EM +GI P
Sbjct: 483 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542
Query: 143 DVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
D ITYS++I G+C ++A + M +P+ T N LI+ Y
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGY 589
Score = 88.2 bits (217), Expect = 1e-15
Identities = 48/149 (32%), Positives = 82/149 (55%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G +PD++T+N LI GL++ + +A +L+ + G P +T+ ++ LC+ A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
++ +M S S PNVV ++T+++ CK G + + LF EM +GI D I Y T+I
Sbjct: 564 TQMFVSMGSKSF-SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIY 622
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRT 27
G +G+ N A + EM+ + + PD T
Sbjct: 623 GFRKVGNINGALDIFQEMISSGVYPDTIT 651
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/152 (28%), Positives = 80/152 (52%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P++VT+N LIN V + +A +L+ ++ G P +T+ ++ C+ D A +
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ-DRLDAAED 379
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
+ + + P+V ++T++D C + + L EM +G+ + +TY+T+I G C
Sbjct: 380 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
+G N A L +M+ + + PD TCN L+D
Sbjct: 440 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 471
Score = 83.2 bits (204), Expect = 3e-14
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKL-----------GFQPTLVTFGTICK 327
G PDIVT NTL++GL + A++++ + K G +P ++T+ +
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517
Query: 326 SLCRTGDNAGALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIR 147
L G A +L M H ++P+ + YS+++D LCK L +A +F M SK
Sbjct: 518 GLINEGKFLEAEELYEEMP-HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFS 576
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPD 36
P+V+T++T+I G C G +D L EM I D
Sbjct: 577 PNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613
Score = 81.6 bits (200), Expect = 1e-13
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 1/152 (0%)
Frame = -2
Query: 461 DIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKLL 282
DI +F LI S + A+ + ++ KLG P +VTF T+ LC + AL L
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174
Query: 281 RNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMCT 102
H P+V+ ++T+++ LC++G + +A+ L M G++PD ITY T + GMC
Sbjct: 175 -----HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK 229
Query: 101 LGHWNDAQLLLTEMLE-NKITPDNRTCNILID 9
+G A LL +M E + I P+ + +ID
Sbjct: 230 MGDTVSALNLLRKMEEISHIKPNVVIYSAIID 261
Score = 79.0 bits (193), Expect = 6e-13
Identities = 45/155 (29%), Positives = 83/155 (53%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+P++V ++ +I+GL + + + +L+ + G P +VT+ + C +G + A +
Sbjct: 250 KPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQR 309
Query: 287 LLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGM 108
LL+ M + PNVV Y+ ++++ K+G +A L+ EM +GI P+ ITY+++I G
Sbjct: 310 LLQEMLERK-ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368
Query: 107 CTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
C + A+ + M +PD T LID Y
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGY 403
Score = 77.0 bits (188), Expect = 2e-12
Identities = 46/154 (29%), Positives = 75/154 (48%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+IVT+N +I G + + A L +++ P +VT+ + + + G A
Sbjct: 283 GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEA 342
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L M ++PN + Y++++D CK L A +F M +KG PDV T++T+I
Sbjct: 343 AELYDEMLPRG-IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 401
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G C +D LL EM + + T N LI
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435
Score = 70.1 bits (170), Expect = 3e-10
Identities = 41/133 (30%), Positives = 70/133 (52%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD +T++++I+GL + ++A ++ + F P +VTF T+ C+ G
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L+L M ++ + +IY T++ K G ++ A+ +F EM S G+ PD IT IR
Sbjct: 599 LELFCEMGRRG-IVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTIT----IR 653
Query: 113 GMCTLGHWNDAQL 75
M T G W+ +L
Sbjct: 654 NMLT-GFWSKEEL 665
>gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 155 bits (392), Expect = 5e-36
Identities = 77/155 (49%), Positives = 103/155 (66%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+PD++TF TL+NGL + +AV L R+V+ G QP +T+GT +C+ GD AL
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238
Query: 287 LLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGM 108
LLR ME SH+ PNVVIYS I+D LCKDG S + LF EM+ KGI P+++TY+ +I G
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298
Query: 107 CTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
C G W+ AQ LL EMLE KI+P+ T N LI+ +
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAF 333
Score = 96.3 bits (238), Expect = 4e-18
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD+ TF TLI+G + + ++L H + + G VT+ T+ C GD A
Sbjct: 388 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEM-KSK----------GIR 147
L L + M S S V P++V +T+LD LC +G L A+ +F M KSK G+
Sbjct: 448 LDLSQQMIS-SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVE 506
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
PDV+TY+ +I G+ G + +A+ L EM I PD T + +ID
Sbjct: 507 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552
Score = 89.7 bits (221), Expect = 4e-16
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 10/167 (5%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G + VT+NTLI+G V N A+DL +++ G P +VT T+ LC G A
Sbjct: 423 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 482
Query: 293 LKLLRNMESH------SH----VMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRP 144
L++ + M+ SH V P+V+ Y+ ++ L +G +A L+ EM +GI P
Sbjct: 483 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542
Query: 143 DVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
D ITYS++I G+C ++A + M +P+ T N LI+ Y
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGY 589
Score = 88.2 bits (217), Expect = 1e-15
Identities = 48/149 (32%), Positives = 82/149 (55%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G +PD++T+N LI GL++ + +A +L+ + G P +T+ ++ LC+ A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
++ +M S S PNVV ++T+++ CK G + + LF EM +GI D I Y T+I
Sbjct: 564 TQMFVSMGSKSF-SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIY 622
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRT 27
G +G+ N A + EM+ + + PD T
Sbjct: 623 GFRKVGNINGALDIFQEMISSGVYPDTIT 651
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/152 (28%), Positives = 80/152 (52%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P++VT+N LIN V + +A +L+ ++ G P +T+ ++ C+ D A +
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ-DRLDAAED 379
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
+ + + P+V ++T++D C + + L EM +G+ + +TY+T+I G C
Sbjct: 380 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
+G N A L +M+ + + PD TCN L+D
Sbjct: 440 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 471
Score = 83.2 bits (204), Expect = 3e-14
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKL-----------GFQPTLVTFGTICK 327
G PDIVT NTL++GL + A++++ + K G +P ++T+ +
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517
Query: 326 SLCRTGDNAGALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIR 147
L G A +L M H ++P+ + YS+++D LCK L +A +F M SK
Sbjct: 518 GLINEGKFLEAEELYEEMP-HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFS 576
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPD 36
P+V+T++T+I G C G +D L EM I D
Sbjct: 577 PNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613
Score = 81.6 bits (200), Expect = 1e-13
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 1/152 (0%)
Frame = -2
Query: 461 DIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKLL 282
DI +F LI S + A+ + ++ KLG P +VTF T+ LC + AL L
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174
Query: 281 RNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMCT 102
H P+V+ ++T+++ LC++G + +A+ L M G++PD ITY T + GMC
Sbjct: 175 -----HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK 229
Query: 101 LGHWNDAQLLLTEMLE-NKITPDNRTCNILID 9
+G A LL +M E + I P+ + +ID
Sbjct: 230 MGDTVSALNLLRKMEEISHIKPNVVIYSAIID 261
Score = 79.0 bits (193), Expect = 6e-13
Identities = 45/155 (29%), Positives = 83/155 (53%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+P++V ++ +I+GL + + + +L+ + G P +VT+ + C +G + A +
Sbjct: 250 KPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQR 309
Query: 287 LLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGM 108
LL+ M + PNVV Y+ ++++ K+G +A L+ EM +GI P+ ITY+++I G
Sbjct: 310 LLQEMLERK-ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368
Query: 107 CTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
C + A+ + M +PD T LID Y
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGY 403
Score = 77.0 bits (188), Expect = 2e-12
Identities = 46/154 (29%), Positives = 75/154 (48%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+IVT+N +I G + + A L +++ P +VT+ + + + G A
Sbjct: 283 GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEA 342
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L M ++PN + Y++++D CK L A +F M +KG PDV T++T+I
Sbjct: 343 AELYDEMLPRG-IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 401
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G C +D LL EM + + T N LI
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435
Score = 70.1 bits (170), Expect = 3e-10
Identities = 41/133 (30%), Positives = 70/133 (52%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD +T++++I+GL + ++A ++ + F P +VTF T+ C+ G
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L+L M ++ + +IY T++ K G ++ A+ +F EM S G+ PD IT IR
Sbjct: 599 LELFCEMGRRG-IVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTIT----IR 653
Query: 113 GMCTLGHWNDAQL 75
M T G W+ +L
Sbjct: 654 NMLT-GFWSKEEL 665
>emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 154 bits (390), Expect = 9e-36
Identities = 77/155 (49%), Positives = 104/155 (67%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+P++VTF TL+NGL + +AV L R+++ G QP +T+GTI +C+ GD AL
Sbjct: 179 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 238
Query: 287 LLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGM 108
LLR ME SH++PNVVIY+TI+D L KDG S A LF EM+ K I PD++TY+ +I G
Sbjct: 239 LLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGF 298
Query: 107 CTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
C G W+DA+ LL EMLE KI PD T + LI+ +
Sbjct: 299 CISGRWSDAEQLLQEMLERKINPDVVTFSALINAF 333
Score = 100 bits (248), Expect = 3e-19
Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PDI+TFNTLI G + + + L H + + G +T+ T+ C+ GD A
Sbjct: 388 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 447
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEM-KSK----------GIR 147
LL+ M S S V PNVV +T+LD LC +G L A+ +F M KSK G+
Sbjct: 448 QDLLQEMIS-SGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVE 506
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
PDV TY+ +I G+ G + +A+ L EM I PD T + +ID
Sbjct: 507 PDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552
Score = 87.8 bits (216), Expect = 1e-15
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Frame = -2
Query: 452 TFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKLLRNM 273
+F L+ S + A+ + ++ KLGF PT+VTF T+ LC + AL L
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF--- 174
Query: 272 ESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMCTLGH 93
H PNVV ++T+++ LC++G + +A+ L M G++P+ ITY TI+ GMC +G
Sbjct: 175 --HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGD 232
Query: 92 WNDAQLLLTEMLE-NKITPDNRTCNILID 9
A LL +M E + I P+ N +ID
Sbjct: 233 TVSALNLLRKMEEVSHIIPNVVIYNTIID 261
Score = 85.9 bits (211), Expect = 5e-15
Identities = 45/152 (29%), Positives = 81/152 (53%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
PD+VTF+ LIN V + +A +L+ ++ P+ VT+ ++ C+ + A +
Sbjct: 321 PDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQ-NRLDAAEH 379
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
+ + P+++ ++T++ C+ + I L EM G+ + ITY+T+I G C
Sbjct: 380 MFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFC 439
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
+G N AQ LL EM+ + + P+ TCN L+D
Sbjct: 440 QVGDLNAAQDLLQEMISSGVCPNVVTCNTLLD 471
Score = 84.3 bits (207), Expect = 2e-14
Identities = 46/149 (30%), Positives = 81/149 (54%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G +PD+ T+N LI GL++ + +A +L+ + G P +T+ ++ LC+ A
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
++ +M S S P+VV ++T++ CK G++ + LF EM +GI D ITY T+I
Sbjct: 564 TQMFDSMGSKSF-SPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIY 622
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRT 27
G + + + A + EM+ + + PD T
Sbjct: 623 GFRKVDNIDGALDIFQEMISSGVYPDTIT 651
Score = 81.3 bits (199), Expect = 1e-13
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKL-----------GFQPTLVTFGTICK 327
G P++VT NTL++GL + A++++ + K G +P + T+ +
Sbjct: 458 GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILIC 517
Query: 326 SLCRTGDNAGALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIR 147
L G A +L M H ++P+ + YS+++D LCK L +A +F M SK
Sbjct: 518 GLINEGKFLEAEELYEEMP-HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFS 576
Query: 146 PDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
PDV+T++T+I G C G +D L EM + I D T LI
Sbjct: 577 PDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLI 621
Score = 71.2 bits (173), Expect = 1e-10
Identities = 44/154 (28%), Positives = 80/154 (51%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
P++V +NT+I+GL + + A +L+ + + P +VT+ + C +G + A +L
Sbjct: 251 PNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQL 310
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
L+ M + P+VV +S ++++ K+G +A L+ EM + I P +TYS++I G C
Sbjct: 311 LQEMLERK-INPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFC 369
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
+ A+ + +PD T N LI Y
Sbjct: 370 KQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGY 403
>gb|EOY11605.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 625
Score = 153 bits (386), Expect = 3e-35
Identities = 76/158 (48%), Positives = 105/158 (66%)
Frame = -2
Query: 476 LGYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAG 297
LG QP+I+TF TL+NGL + QAV L+ +V+ G+QP L+T TI LC+ G G
Sbjct: 141 LGIQPNIITFTTLVNGLCFEGKIAQAVMLFDEIVRNGYQPNLITHNTIINGLCKVGYTTG 200
Query: 296 ALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTII 117
A++LLRNME S +P++V Y+TI+DSLCKD L+++A+ L +EM KGI DV+TYS +I
Sbjct: 201 AIRLLRNME-RSGCLPDIVTYNTIIDSLCKDKLVAEALNLLSEMTGKGILSDVVTYSCLI 259
Query: 116 RGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
MC LG W + LLTEM+ N D + IL+D +
Sbjct: 260 HAMCNLGQWKEVMRLLTEMVANNCKLDVVSYGILVDAF 297
Score = 96.7 bits (239), Expect = 3e-18
Identities = 48/154 (31%), Positives = 88/154 (57%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P++ ++N ++NG + + ++A +L+ + + G P+ VT+ + +C+ G A
Sbjct: 352 GCVPNVCSYNIMVNGFCKLQKIDEAKELFDEMSRNGIVPSTVTYTALINGMCQVGRLGAA 411
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L + M + ++PN V YST+L LCK G + +A+ LF M+S GI +++ YS +I
Sbjct: 412 RELYKEMSARG-LVPNTVTYSTLLHGLCKHGHVHEAVELFHVMQSNGIEANIVHYSILID 470
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G+C +G N A+ L + + P+ T NI+I
Sbjct: 471 GLCQVGQLNVARKLFCALPVKGLHPNVYTFNIMI 504
Score = 90.9 bits (224), Expect = 2e-16
Identities = 52/154 (33%), Positives = 85/154 (55%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P VT+ LING+ V + A +L+ + G P VT+ T+ LC+ G A
Sbjct: 387 GIVPSTVTYTALINGMCQVGRLGAARELYKEMSARGLVPNTVTYSTLLHGLCKHGHVHEA 446
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
++L M+S+ + N+V YS ++D LC+ G L+ A LF + KG+ P+V T++ +I+
Sbjct: 447 VELFHVMQSNG-IEANIVHYSILIDGLCQVGQLNVARKLFCALPVKGLHPNVYTFNIMIK 505
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G+C G N+A L +M N + D+ + N +I
Sbjct: 506 GLCKEGLPNEAYDLFRKMEMNGCSLDSCSYNTMI 539
Score = 84.0 bits (206), Expect = 2e-14
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 34/189 (17%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
GYQP+++T NT+INGL V A+ L + + G P +VT+ TI SLC+ A A
Sbjct: 177 GYQPNLITHNTIINGLCKVGYTTGAIRLLRNMERSGCLPDIVTYNTIIDSLCKDKLVAEA 236
Query: 293 LKLLRNMESHS------------HVMPN----------------------VVIYSTILDS 216
L LL M H M N VV Y ++D+
Sbjct: 237 LNLLSEMTGKGILSDVVTYSCLIHAMCNLGQWKEVMRLLTEMVANNCKLDVVSYGILVDA 296
Query: 215 LCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITPD 36
CK+G +S+A + M +G+ D ITY+T++ G G ++A+ +L M+ P+
Sbjct: 297 FCKEGRVSEARDIVEVMIQQGVDLDTITYTTLMDGYSLQGKMDEARKVLNLMITKGCVPN 356
Query: 35 NRTCNILID 9
+ NI+++
Sbjct: 357 VCSYNIMVN 365
Score = 80.1 bits (196), Expect = 3e-13
Identities = 45/156 (28%), Positives = 84/156 (53%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+ VT++TL++GL ++AV+L+H + G + +V + + LC+ G A
Sbjct: 422 GLVPNTVTYSTLLHGLCKHGHVHEAVELFHVMQSNGIEANIVHYSILIDGLCQVGQLNVA 481
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
KL + + PNV ++ ++ LCK+GL ++A LF +M+ G D +Y+T+I+
Sbjct: 482 RKLFCALPVKG-LHPNVYTFNIMIKGLCKEGLPNEAYDLFRKMEMNGCSLDSCSYNTMIK 540
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDM 6
G + A +L EM+ + D+ T +++D+
Sbjct: 541 GFFQNNEVSRAVQILHEMVGKGFSADSSTATMVVDL 576
Score = 77.8 bits (190), Expect = 1e-12
Identities = 43/155 (27%), Positives = 83/155 (53%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G D +T+ TL++G + ++A + + ++ G P + ++ + C+ A
Sbjct: 317 GVDLDTITYTTLMDGYSLQGKMDEARKVLNLMITKGCVPNVCSYNIMVNGFCKLQKIDEA 376
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L M S + ++P+ V Y+ +++ +C+ G L A L+ EM ++G+ P+ +TYST++
Sbjct: 377 KELFDEM-SRNGIVPSTVTYTALINGMCQVGRLGAARELYKEMSARGLVPNTVTYSTLLH 435
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G+C GH ++A L M N I + +ILID
Sbjct: 436 GLCKHGHVHEAVELFHVMQSNGIEANIVHYSILID 470
>gb|EMJ09209.1| hypothetical protein PRUPE_ppa003306mg [Prunus persica]
Length = 586
Score = 153 bits (386), Expect = 3e-35
Identities = 75/157 (47%), Positives = 109/157 (69%), Gaps = 1/157 (0%)
Frame = -2
Query: 476 LGYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLG-FQPTLVTFGTICKSLCRTGDNA 300
+G +PD+ TF TLING + ++ +A L H++++ G QP +VT+GT+ K C G+N+
Sbjct: 132 VGLEPDVFTFTTLINGFLLENRVAEAATLLHKMMRGGNCQPNVVTYGTLVKGFCMKGNNS 191
Query: 299 GALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTI 120
A++LLR ME + P++V+YSTI+DSLCKD L+ A+ LF+EM SKGI PDVITY+++
Sbjct: 192 AAIQLLRKMEEGA-CKPDLVVYSTIIDSLCKDTLVDDALNLFSEMMSKGIAPDVITYTSL 250
Query: 119 IRGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
I G+C LG W +A LL EM I PD T ++L+D
Sbjct: 251 IHGVCKLGEWKEATRLLNEMASKNIFPDVFTFSVLVD 287
Score = 82.4 bits (202), Expect = 6e-14
Identities = 46/152 (30%), Positives = 79/152 (51%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
PD+ TF+ L++ + +A + +++ P VT+ ++ C G A K+
Sbjct: 277 PDVFTFSVLVDTICKEGMVVEAEGVVEMMIERDIDPDSVTYNSLMDGYCLRGRMDKAKKV 336
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
M S M NVV YST+++ CK + +A+ LF +M KG+ D +TY+ ++ G C
Sbjct: 337 FELMLSKGS-MVNVVSYSTLINGYCKHKKIDEAMMLFLDMSHKGLVADTVTYTALMDGFC 395
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
+G +DAQ L ++M PD + +IL+D
Sbjct: 396 KVGRIDDAQKLFSKMQACGQLPDAQAFSILLD 427
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/137 (27%), Positives = 81/137 (59%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+PD+V ++T+I+ L + A++L+ ++ G P ++T+ ++ +C+ G+ A +
Sbjct: 206 KPDLVVYSTIIDSLCKDTLVDDALNLFSEMMSKGIAPDVITYTSLIHGVCKLGEWKEATR 265
Query: 287 LLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGM 108
LL M S ++ P+V +S ++D++CK+G++ +A + M + I PD +TY++++ G
Sbjct: 266 LLNEMAS-KNIFPDVFTFSVLVDTICKEGMVVEAEGVVEMMIERDIDPDSVTYNSLMDGY 324
Query: 107 CTLGHWNDAQLLLTEML 57
C G + A+ + ML
Sbjct: 325 CLRGRMDKAKKVFELML 341
Score = 80.5 bits (197), Expect = 2e-13
Identities = 46/154 (29%), Positives = 79/154 (51%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G D VT+ L++G V + + A L+ ++ G P F + LC+ + A
Sbjct: 379 GLVADTVTYTALMDGFCKVGRIDDAQKLFSKMQACGQLPDAQAFSILLDGLCKNRQLSRA 438
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
++L ME+ + N+VIY+ +++ LC G + A LF + SKG+ P+ TY+ +I
Sbjct: 439 MQLFGEMEAKKLDI-NIVIYNILIEGLCIAGKIESARDLFCGLSSKGLEPNARTYTIMIN 497
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G+C G ++A+ L EM +P+ T N +I
Sbjct: 498 GLCIAGLTSEAEKFLIEMEVEGCSPNGWTYNTII 531
Score = 79.0 bits (193), Expect = 6e-13
Identities = 45/155 (29%), Positives = 83/155 (53%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G ++V+++TLING + ++A+ L+ + G VT+ + C+ G A
Sbjct: 344 GSMVNVVSYSTLINGYCKHKKIDEAMMLFLDMSHKGLVADTVTYTALMDGFCKVGRIDDA 403
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
KL M++ +P+ +S +LD LCK+ LS+A+ LF EM++K + +++ Y+ +I
Sbjct: 404 QKLFSKMQACGQ-LPDAQAFSILLDGLCKNRQLSRAMQLFGEMEAKKLDINIVIYNILIE 462
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G+C G A+ L + + P+ RT I+I+
Sbjct: 463 GLCIAGKIESARDLFCGLSSKGLEPNARTYTIMIN 497
Score = 68.6 bits (166), Expect = 9e-10
Identities = 43/156 (27%), Positives = 76/156 (48%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PD F+ L++GL Q ++A+ L+ + +V + + + LC G A
Sbjct: 414 GQLPDAQAFSILLDGLCKNRQLSRAMQLFGEMEAKKLDINIVIYNILIEGLCIAGKIESA 473
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L + S + PN Y+ +++ LC GL S+A EM+ +G P+ TY+TIIR
Sbjct: 474 RDLFCGLSSKG-LEPNARTYTIMINGLCIAGLTSEAEKFLIEMEVEGCSPNGWTYNTIIR 532
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDM 6
G + A +L+ M+E + D T +++++
Sbjct: 533 GFIHNKQTSRAMVLIQTMVEKGFSADASTTELIVNL 568
>ref|XP_006382123.1| hypothetical protein POPTR_0006s28580g [Populus trichocarpa]
gi|550337275|gb|ERP59920.1| hypothetical protein
POPTR_0006s28580g [Populus trichocarpa]
Length = 567
Score = 152 bits (385), Expect = 3e-35
Identities = 76/158 (48%), Positives = 106/158 (67%)
Frame = -2
Query: 476 LGYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAG 297
LG QP IVTFNTLINGL V + QAV+L+ +V G QP + T+ TI LC+TG+ A
Sbjct: 133 LGLQPTIVTFNTLINGLCKVGEFAQAVELFDDMVARGCQPNVYTYTTIINGLCKTGEAAE 192
Query: 296 ALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTII 117
A L + ME + P+VV YST++DSLCKD L+++A+ +F+ MK+KGI PD+ TY+++I
Sbjct: 193 AAGLFKKMEE-AGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPDIFTYTSLI 251
Query: 116 RGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
+G+C W +A LL EM I PD T N+L+D +
Sbjct: 252 QGLCNFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTF 289
Score = 98.6 bits (244), Expect = 8e-19
Identities = 47/146 (32%), Positives = 83/146 (56%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G++P + ++N LING + ++A L++ ++ G P VT+ T+ LC+ G A
Sbjct: 344 GFKPVVFSYNILINGYCKAKRIDEAKQLFNEMIHQGLTPNKVTYNTLIHGLCQLGRVREA 403
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L RNM ++ + +PN+ YS +LD CK G L +A LF M+S ++P+ + Y+ ++
Sbjct: 404 QDLFRNMRTNGN-LPNLRTYSILLDGFCKQGYLGKAFRLFRAMQSTHLKPNPVMYTILVH 462
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPD 36
MC G+ DA+ L +E+ + P+
Sbjct: 463 AMCKSGNLKDARKLFSELFVQGLQPN 488
Score = 95.1 bits (235), Expect = 9e-18
Identities = 53/154 (34%), Positives = 87/154 (56%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P+ VT+NTLI+GL + + +A DL+ + G P L T+ + C+ G A
Sbjct: 379 GLTPNKVTYNTLIHGLCQLGRVREAQDLFRNMRTNGNLPNLRTYSILLDGFCKQGYLGKA 438
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
+L R M+S +H+ PN V+Y+ ++ ++CK G L A LF+E+ +G++P+V Y+TII
Sbjct: 439 FRLFRAMQS-THLKPNPVMYTILVHAMCKSGNLKDARKLFSELFVQGLQPNVQIYTTIIF 497
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G+C G ++A M E+ PD ++I
Sbjct: 498 GLCKEGLLDEALEAFRNMEEDGCPPDEICYRVII 531
Score = 87.8 bits (216), Expect = 1e-15
Identities = 47/157 (29%), Positives = 88/157 (56%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G QPD+VT++TLI+ L N+A+D++ + G P + T+ ++ + LC A
Sbjct: 204 GCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCNFSRWKEA 263
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
LL M S ++MP++V ++ ++D+ CK+G + +A+ + M G+ P+V+TY++++
Sbjct: 264 SALLNEMTS-LNIMPDIVTFNVLVDTFCKEGKVLEALGVLKTMTEMGVEPNVVTYNSLMY 322
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
G + +A+ L M+ P + NILI+ Y
Sbjct: 323 GYSSCTQVVEARKLFDVMITKGFKPVVFSYNILINGY 359
Score = 86.3 bits (212), Expect = 4e-15
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 35/190 (18%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G PDI T+ +LI GL + + +A L + + L P +VTF + + C+ G A
Sbjct: 239 GISPDIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVLEA 298
Query: 293 LKLLRNMESHSHVMPNVVIYSTIL-----------------------------------D 219
L +L+ M + V PNVV Y++++ +
Sbjct: 299 LGVLKTM-TEMGVEPNVVTYNSLMYGYSSCTQVVEARKLFDVMITKGFKPVVFSYNILIN 357
Query: 218 SLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMCTLGHWNDAQLLLTEMLENKITP 39
CK + +A LF EM +G+ P+ +TY+T+I G+C LG +AQ L M N P
Sbjct: 358 GYCKAKRIDEAKQLFNEMIHQGLTPNKVTYNTLIHGLCQLGRVREAQDLFRNMRTNGNLP 417
Query: 38 DNRTCNILID 9
+ RT +IL+D
Sbjct: 418 NLRTYSILLD 427
Score = 80.5 bits (197), Expect = 2e-13
Identities = 45/155 (29%), Positives = 80/155 (51%)
Frame = -2
Query: 476 LGYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAG 297
+G +P++VT+N+L+ G S Q +A L+ ++ GF+P + ++ + C+
Sbjct: 308 MGVEPNVVTYNSLMYGYSSCTQVVEARKLFDVMITKGFKPVVFSYNILINGYCKAKRIDE 367
Query: 296 ALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTII 117
A +L M H + PN V Y+T++ LC+ G + +A LF M++ G P++ TYS ++
Sbjct: 368 AKQLFNEM-IHQGLTPNKVTYNTLIHGLCQLGRVREAQDLFRNMRTNGNLPNLRTYSILL 426
Query: 116 RGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G C G+ A L M + P+ IL+
Sbjct: 427 DGFCKQGYLGKAFRLFRAMQSTHLKPNPVMYTILV 461
>ref|XP_006382722.1| helicase domain-containing family protein [Populus trichocarpa]
gi|550338089|gb|ERP60519.1| helicase domain-containing
family protein [Populus trichocarpa]
Length = 588
Score = 152 bits (384), Expect = 4e-35
Identities = 73/156 (46%), Positives = 107/156 (68%)
Frame = -2
Query: 476 LGYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAG 297
LG QPD +TFNTLING + +AV L++ +V+ G QP ++++ T+ LC++G+ +
Sbjct: 132 LGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSM 191
Query: 296 ALKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTII 117
AL+LLR ME PN+V Y+TI+DSLCKD L++ A+ L +EM +GI PDV+TYSTI+
Sbjct: 192 ALQLLRKMEEKG-CKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTIL 250
Query: 116 RGMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G C+LGH N+A +L EM+ + P+ T IL+D
Sbjct: 251 HGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 286
Score = 97.4 bits (241), Expect = 2e-18
Identities = 53/157 (33%), Positives = 84/157 (53%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G +P++V + T+I+ L N A+DL +V G P +VT+ TI C G A
Sbjct: 203 GCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEA 262
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L M + VMPN V ++ ++D LCK+G++S+A +F M KG P+ TY+ ++
Sbjct: 263 TILFNEMVGRN-VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMD 321
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILIDMY 3
G C ++AQ +L M++ P + NILI+ Y
Sbjct: 322 GYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGY 358
Score = 97.4 bits (241), Expect = 2e-18
Identities = 55/155 (35%), Positives = 87/155 (56%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G +P+ T+N L++G +Q ++A + +V G P + ++ + C+ A
Sbjct: 308 GAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEA 367
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
LL M S + P+ V YST++ LC+ G +A+ LF EM S G+ PD++TYST++
Sbjct: 368 KSLLVEM-SEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLD 426
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILID 9
G+C GH ++A LL M E+KI PD NILI+
Sbjct: 427 GLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIE 461
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/151 (32%), Positives = 94/151 (62%)
Frame = -2
Query: 464 PDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKL 285
PD VT++TL+ GL V +P +A++L+ + G P L+T+ T+ LC+ G ALKL
Sbjct: 381 PDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKL 440
Query: 284 LRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMC 105
L++M+ S + P++V+Y+ +++ + G L A LF+++ + GI+P + TY+ +I+G+
Sbjct: 441 LKSMQE-SKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLL 499
Query: 104 TLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
G ++A L +M ++ P++ + N++I
Sbjct: 500 KEGLSDEAYELFRKMEDDGFLPNSCSYNVII 530
Score = 90.9 bits (224), Expect = 2e-16
Identities = 52/154 (33%), Positives = 84/154 (54%)
Frame = -2
Query: 473 GYQPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGA 294
G P + ++N LING + ++A L + + P VT+ T+ + LC+ G A
Sbjct: 343 GCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEA 402
Query: 293 LKLLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIR 114
L L + M S S ++P+++ YST+LD LCK G L +A+ L M+ I PD++ Y+ +I
Sbjct: 403 LNLFKEMCS-SGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIE 461
Query: 113 GMCTLGHWNDAQLLLTEMLENKITPDNRTCNILI 12
GM G A+ L +++ + I P RT I+I
Sbjct: 462 GMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMI 495
Score = 61.2 bits (147), Expect = 1e-07
Identities = 38/135 (28%), Positives = 70/135 (51%)
Frame = -2
Query: 440 LINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALKLLRNMESHS 261
L N +S+D A+ ++R++++ +P++V FG S+ + + + L M+
Sbjct: 42 LSNNSISIDD---ALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFG 98
Query: 260 HVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTIIRGMCTLGHWNDA 81
V NV + +++ LC+ + AI++ +M GI+PD IT++T+I G C G +A
Sbjct: 99 -VTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEA 157
Query: 80 QLLLTEMLENKITPD 36
L EM+ PD
Sbjct: 158 VGLFNEMVRRGHQPD 172
Score = 57.8 bits (138), Expect = 2e-06
Identities = 36/117 (30%), Positives = 58/117 (49%)
Frame = -2
Query: 467 QPDIVTFNTLINGLVSVDQPNQAVDLWHRVVKLGFQPTLVTFGTICKSLCRTGDNAGALK 288
+PDIV +N LI G+ + A +L+ ++ G QPT+ T+ + K L + G + A +
Sbjct: 450 EPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYE 509
Query: 287 LLRNMESHSHVMPNVVIYSTILDSLCKDGLLSQAITLFAEMKSKGIRPDVITYSTII 117
L R ME +PN Y+ I+ ++ S AI L EM K D T+ ++
Sbjct: 510 LFRKMEDDG-FLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 565