BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00005899
         (1499 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun...   758   0.0  
ref|XP_002530639.1| DNA-directed RNA polymerase II largest subun...   751   0.0  
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...   751   0.0  
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su...   748   0.0  
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su...   748   0.0  
ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su...   748   0.0  
ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su...   748   0.0  
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr...   748   0.0  
gb|EOX90741.1| DNA-directed RNA polymerase II subunit RPB1 isofo...   744   0.0  
ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su...   741   0.0  
gb|ESW29856.1| hypothetical protein PHAVU_002G104500g [Phaseolus...   739   0.0  
ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II su...   737   0.0  
ref|XP_006412058.1| hypothetical protein EUTSA_v10024193mg [Eutr...   736   0.0  
ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II su...   732   0.0  
ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [S...   731   0.0  
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su...   730   0.0  
ref|XP_006282990.1| hypothetical protein CARUB_v10003976mg [Caps...   730   0.0  
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su...   728   0.0  
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su...   728   0.0  
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su...   728   0.0  

>ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein
            [Populus trichocarpa] gi|550338614|gb|ERP60834.1|
            DNA-directed RNA polymerase II largest subunit family
            protein [Populus trichocarpa]
          Length = 1837

 Score =  758 bits (1958), Expect = 0.0
 Identities = 364/413 (88%), Positives = 392/413 (94%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MDTRFPYSPAEV+KV ++QFGI+SPDEIRQMSV+Q+E SETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRKMKC+TCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVC+NCSKILADEEDHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQALKI+NPK+RLK+IL+ACKNK KCEGGD IDVQ Q++ EPVKKSRGGCGAQQP  TI
Sbjct: 121  FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDNEEPVKKSRGGCGAQQPKLTI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            EGMK+IAEYK+ +KKSD+QEQLPEP ERKQ L+AE+VLSVLKR+SDEDCQLLG +PKYAR
Sbjct: 181  EGMKMIAEYKVQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQER+GAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>ref|XP_002530639.1| DNA-directed RNA polymerase II largest subunit, putative [Ricinus
            communis] gi|223529812|gb|EEF31747.1| DNA-directed RNA
            polymerase II largest subunit, putative [Ricinus
            communis]
          Length = 1855

 Score =  751 bits (1940), Expect = 0.0
 Identities = 360/413 (87%), Positives = 388/413 (93%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MD RFPYSPAEV+KV ++QFGI+SPDEIRQMSVVQ+EFSETTERGKPKPGGLSD RLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEFSETTERGKPKPGGLSDLRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRKMKC+TCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVC+NCSKILADEEDHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQALKI+NPKNRLK+IL+ACKNK KCEGGD IDV  Q+  EPVKKSRGGCGAQQP  TI
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKTKCEGGDDIDVHSQDTDEPVKKSRGGCGAQQPRMTI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            EGMK+IAEYK  +KK+D+QEQLPEP ERKQ L+AE+VL VLKR+SD+DC+LLGFNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDDDCRLLGFNPKYAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NL++QE+ GAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQEKGGAPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDPNINID+LGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
            vinifera]
          Length = 1848

 Score =  751 bits (1939), Expect = 0.0
 Identities = 362/413 (87%), Positives = 386/413 (93%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MD RFPYSPAEV+KV ++QFGI+SPDEIRQMSVVQ+E SETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRKMKC+TCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVC+NCSKILADEEDHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQA KIRNPKNRLK+IL+ACKNK KCEGGD I+ Q  +  EPVKKSRGGCGAQQP  TI
Sbjct: 121  FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            EGMK+IAEYK+ +KK+D+ EQLPEP ERKQQLSAE+VL+VLKR+SDEDC LLG NPKYAR
Sbjct: 181  EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
            [Citrus sinensis]
          Length = 1963

 Score =  748 bits (1932), Expect = 0.0
 Identities = 360/413 (87%), Positives = 386/413 (93%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MDTRFPYSPAEV+KV ++QFGI+SPDEIRQMSVVQ+E  ETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRKMKC+TCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VC+NCSKILADE+DHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQALKIRNPKNRLK+IL+ACKNK KCEGGD IDV  Q+  EP+KK++GGCGAQQP  TI
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            EGMK+IAEYK  +KK+D+QEQLPEP ERKQ L+AE+VL VLKR+SDEDCQLLG NPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
            [Citrus sinensis]
          Length = 1853

 Score =  748 bits (1932), Expect = 0.0
 Identities = 360/413 (87%), Positives = 386/413 (93%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MDTRFPYSPAEV+KV ++QFGI+SPDEIRQMSVVQ+E  ETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRKMKC+TCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VC+NCSKILADE+DHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQALKIRNPKNRLK+IL+ACKNK KCEGGD IDV  Q+  EP+KK++GGCGAQQP  TI
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            EGMK+IAEYK  +KK+D+QEQLPEP ERKQ L+AE+VL VLKR+SDEDCQLLG NPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3
            [Citrus sinensis]
          Length = 1790

 Score =  748 bits (1932), Expect = 0.0
 Identities = 360/413 (87%), Positives = 386/413 (93%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MDTRFPYSPAEV+KV ++QFGI+SPDEIRQMSVVQ+E  ETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRKMKC+TCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VC+NCSKILADE+DHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQALKIRNPKNRLK+IL+ACKNK KCEGGD IDV  Q+  EP+KK++GGCGAQQP  TI
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            EGMK+IAEYK  +KK+D+QEQLPEP ERKQ L+AE+VL VLKR+SDEDCQLLG NPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Citrus sinensis] gi|568825318|ref|XP_006467028.1|
            PREDICTED: DNA-directed RNA polymerase II subunit 1-like
            isoform X2 [Citrus sinensis]
          Length = 1860

 Score =  748 bits (1932), Expect = 0.0
 Identities = 360/413 (87%), Positives = 386/413 (93%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MDTRFPYSPAEV+KV ++QFGI+SPDEIRQMSVVQ+E  ETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRKMKC+TCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VC+NCSKILADE+DHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQALKIRNPKNRLK+IL+ACKNK KCEGGD IDV  Q+  EP+KK++GGCGAQQP  TI
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            EGMK+IAEYK  +KK+D+QEQLPEP ERKQ L+AE+VL VLKR+SDEDCQLLG NPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
            gi|557527347|gb|ESR38597.1| hypothetical protein
            CICLE_v10024686mg [Citrus clementina]
          Length = 1860

 Score =  748 bits (1931), Expect = 0.0
 Identities = 360/413 (87%), Positives = 385/413 (93%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MDTRFPYSPAEV+KV ++QFGI+SPDEIRQMSVVQ+E  ETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRKMKC+TCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR VC+NCSKILADE+DHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQALKIRNPKNRLK+IL+ACKNK KCEGGD IDV  Q+  EP+KK +GGCGAQQP  TI
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKKKGGCGAQQPKLTI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            EGMK+IAEYK  +KK+D+QEQLPEP ERKQ L+AE+VL VLKR+SDEDCQLLG NPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>gb|EOX90741.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
            cacao] gi|508698846|gb|EOX90742.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
          Length = 1861

 Score =  744 bits (1920), Expect = 0.0
 Identities = 357/413 (86%), Positives = 386/413 (93%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MD RFPYSPAEV+KV ++QFGI+SPDEIRQMSVVQ+E  ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRKMKC+TCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVC+NCSKILADEE+HK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQALKI+NPKNRLK+IL+ACKNK KCEGGD IDVQ Q+  EPVKKSRGGCGAQQP  +I
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            +GMK+IAEYK  +K++D+QEQLPEP ERKQ L+AE+VLSVLKR+SDEDCQLLG NPK+AR
Sbjct: 181  DGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTH LAMIIRHN+NLRRQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine
            max]
          Length = 1827

 Score =  741 bits (1912), Expect = 0.0
 Identities = 356/413 (86%), Positives = 383/413 (92%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MD RFP+SPAEV+KV ++QFGI+SPDEIRQMSVVQ+E  ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRK+KC+TCTA+MAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVC+NCSKILADE DHK
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQAL+IRNPKNRLK+IL+ACKNK KCEGGD ID+  Q+  EPVKKSRGGCGAQQP  TI
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            EGMK+IAEYK  +KKSD+QEQLPEP ERKQ LSAE+VL VLKR+SDEDCQLLG NPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>gb|ESW29856.1| hypothetical protein PHAVU_002G104500g [Phaseolus vulgaris]
          Length = 1834

 Score =  739 bits (1909), Expect = 0.0
 Identities = 356/413 (86%), Positives = 382/413 (92%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MD RFP+SPAEV+KV ++QFGI+SPDEIRQMSVVQ+E  ETTERGKPK  GLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRK+KC+TCTA+MAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVC+NCSKILADE DHK
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQAL+IRNPKNRLK+IL+ACKNK KCEGGD ID+  Q+  EPVKKSRGGCGAQQP  TI
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            EGMKIIAEYK  +KKSD+QEQLPEP ERKQ LSAE+VL VLKR+SDEDCQLLG NPKYAR
Sbjct: 181  EGMKIIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Glycine max] gi|571435633|ref|XP_006573537.1| PREDICTED:
            DNA-directed RNA polymerase II subunit 1-like isoform X2
            [Glycine max]
          Length = 1827

 Score =  737 bits (1903), Expect = 0.0
 Identities = 355/413 (85%), Positives = 382/413 (92%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MD RFP+SPAEV+KV ++QFGI+SPDEIRQMSVVQ+E  ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRK+KC+TCTA+MAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVC+NCSKILADE DHK
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQAL+IRNPKNRLK+IL+ACKNK KCEGGD ID+  Q+  E VKKSRGGCGAQQP  TI
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTEESVKKSRGGCGAQQPKITI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            EGMK+IAEYK  +KKSD+QEQLPEP ERKQ LSAE+VL VLKR+SDEDCQLLG NPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>ref|XP_006412058.1| hypothetical protein EUTSA_v10024193mg [Eutrema salsugineum]
            gi|557113228|gb|ESQ53511.1| hypothetical protein
            EUTSA_v10024193mg [Eutrema salsugineum]
          Length = 1837

 Score =  736 bits (1900), Expect = 0.0
 Identities = 354/414 (85%), Positives = 386/414 (93%), Gaps = 1/414 (0%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MDTRFP+SPAEVSKV ++QFGI+SPDEIRQMSV+ VE SETTE+GKPK GGLSD RLGTI
Sbjct: 1    MDTRFPFSPAEVSKVRVVQFGILSPDEIRQMSVIHVEHSETTEKGKPKVGGLSDIRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRK+KC+TC ANMAECPGHFGHLELAKPMFH+GF+KTVLSIMRCVC+NCSKILADEEDHK
Sbjct: 61   DRKVKCETCMANMAECPGHFGHLELAKPMFHVGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSID-VQDQEDGEPVKKSRGGCGAQQPTFT 704
            FKQA+KI+NPKNRLK+IL+ACKNK KCEGGD ID VQ+Q+  EPVKKSRGGCGAQQP  T
Sbjct: 121  FKQAMKIKNPKNRLKKILDACKNKTKCEGGDEIDDVQNQDTDEPVKKSRGGCGAQQPKLT 180

Query: 703  IEGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYA 524
            IEGMK+ AEYK+T+KK+DE +QLPEPAERKQ L A++VLSVLKR+SDEDCQLLGFNPKYA
Sbjct: 181  IEGMKMTAEYKITRKKTDEPDQLPEPAERKQTLGADRVLSVLKRISDEDCQLLGFNPKYA 240

Query: 523  RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHII 344
            RPDWMIL+VL        PSVMMD +SRSEDDLTHQLAMIIRHN+NL+RQE+NGAPAHII
Sbjct: 241  RPDWMILEVLPIPPPPVRPSVMMDATSRSEDDLTHQLAMIIRHNENLKRQEKNGAPAHII 300

Query: 343  SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSA 164
            SEF QLLQFHIATYFDNELPGQPRATQ+SGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  SEFTQLLQFHIATYFDNELPGQPRATQKSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 163  RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            RTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 414


>ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cicer
            arietinum]
          Length = 1834

 Score =  732 bits (1890), Expect = 0.0
 Identities = 352/413 (85%), Positives = 383/413 (92%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MD RFP+SPAEV+KV ++QFGI+SPDEIRQMSVVQ+E  ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKIGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRKMKC+TCTA+MAECPGHFG+LELAKPMFHIGFLKTVLSIMRCVC+NCSKILADE+DHK
Sbjct: 61   DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEQDHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQAL+I++PKNRL++IL+ACKNK KCEGGD ID+   +  EPVKKSRGGCGAQQP  TI
Sbjct: 121  FKQALRIKSPKNRLRKILDACKNKTKCEGGDDIDMPGHDTEEPVKKSRGGCGAQQPKITI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            EGMK+IAEYK  +KKSD+QEQLPEP ERKQ LSAE+VL VLKR+SDEDCQLLG NPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDW+ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NL+RQERNG+PAHIIS
Sbjct: 241  PDWLILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [Sorghum bicolor]
            gi|241940227|gb|EES13372.1| hypothetical protein
            SORBIDRAFT_07g003680 [Sorghum bicolor]
          Length = 1857

 Score =  731 bits (1887), Expect = 0.0
 Identities = 353/413 (85%), Positives = 383/413 (92%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MD RFPYSPAEV+KV L+QFGI+SPDEIRQMSVVQ+E +ET ERGKPKPGGLSDPRLGTI
Sbjct: 1    MDARFPYSPAEVAKVELVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRK+KC+TC A MAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVC+NCSKILADE++ K
Sbjct: 61   DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDETK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQALKIRNPKNRLKRI +ACK+KK C GGD +DVQ+Q+  EPVKK RGGCGAQQP  T+
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQDTDEPVKK-RGGCGAQQPNITV 179

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            +GMK++AE+K  KKKSD+Q+QLPEP ERKQ LSAE+VL+VLKR+SDEDC LLG NPKYAR
Sbjct: 180  DGMKMVAEFKAPKKKSDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYAR 239

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNGAPAHII+
Sbjct: 240  PDWMILQVLPVPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIT 299

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 300  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 359

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 360  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 412


>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
            lycopersicum]
          Length = 1846

 Score =  730 bits (1885), Expect = 0.0
 Identities = 348/413 (84%), Positives = 382/413 (92%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MD RFP+SPAEV+KV  +QFGI+SPDEIRQMSVV +E  ETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRKMKC+TC ANMAECPGHFGHLELAKPMFHIGF+K VLSI+RCVC+NCSKILADE+D K
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQA++IRNPKNRL+++L+ACKNK KCEGGD IDVQ Q+  EPVKKSRGGCGAQQP  +I
Sbjct: 121  FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            +GMK++AEYKM KKKSD+ EQ+PEP ERKQQLSAE+VLS+LKRVSDEDC LLG NP++AR
Sbjct: 181  DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQ L        PSVMMDTSSRSEDDLTHQLAMIIRHN+NL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSIC+RLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>ref|XP_006282990.1| hypothetical protein CARUB_v10003976mg [Capsella rubella]
            gi|482551695|gb|EOA15888.1| hypothetical protein
            CARUB_v10003976mg [Capsella rubella]
          Length = 1838

 Score =  730 bits (1884), Expect = 0.0
 Identities = 350/414 (84%), Positives = 385/414 (92%), Gaps = 1/414 (0%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MDTRFP+SPAEVSKV ++QFGI+SPDEIRQMSV+ VE SETTE+GKPK GGLSD RLGTI
Sbjct: 1    MDTRFPFSPAEVSKVRVVQFGILSPDEIRQMSVIHVEHSETTEKGKPKVGGLSDIRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRK+KC+TC ANMAECPGHFGHLELAKPM+H+GF+KTVLSIMRCVC+NCSKILADEE+HK
Sbjct: 61   DRKVKCETCMANMAECPGHFGHLELAKPMYHVGFMKTVLSIMRCVCFNCSKILADEEEHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSID-VQDQEDGEPVKKSRGGCGAQQPTFT 704
            FKQA+KI+NPKNRLK+IL+ACKNK KC+GGD ID V  Q+  EPVKKSRGGCGAQQP  T
Sbjct: 121  FKQAMKIKNPKNRLKKILDACKNKTKCDGGDEIDDVHSQDTEEPVKKSRGGCGAQQPKLT 180

Query: 703  IEGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYA 524
            IEGMK+IAEYK+T+KK+DE +QLPEPAERKQ L A++VLSVLKR+SDEDCQLLGFNPK+A
Sbjct: 181  IEGMKMIAEYKITRKKTDEPDQLPEPAERKQTLGADRVLSVLKRISDEDCQLLGFNPKFA 240

Query: 523  RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHII 344
            RPDWMIL+VL        PSVMMD +SRSEDDLTHQLAMIIRHN+NL+RQE+NGAPAHII
Sbjct: 241  RPDWMILEVLPIPPPPVRPSVMMDATSRSEDDLTHQLAMIIRHNENLKRQEKNGAPAHII 300

Query: 343  SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSA 164
            SEF QLLQFHIATYFDNELPGQPRATQ+SGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  SEFTQLLQFHIATYFDNELPGQPRATQKSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 163  RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            RTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 414


>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza
            brachyantha]
          Length = 1855

 Score =  728 bits (1880), Expect = 0.0
 Identities = 350/413 (84%), Positives = 381/413 (92%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MD RFPYSPAEV+KV L+QFGI+SPDEIRQMSVVQ+E +ET ERGKPKPGGLSDPRLGTI
Sbjct: 1    MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRK+KC+TC A MAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVC+NCSKILADE+D K
Sbjct: 61   DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQALKIRNPKNRLKRI +ACK+KK C GGD +DVQ+Q+D +   K RGGCGAQQP  T+
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKRRGGCGAQQPNITV 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            +GMK++AE+K  KKK+D+QEQLPEP ERKQ LSAE+VL+VLKR+SDEDC LLG NPK+AR
Sbjct: 181  DGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNGAPAHII+
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIT 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
            tuberosum]
          Length = 1839

 Score =  728 bits (1880), Expect = 0.0
 Identities = 347/413 (84%), Positives = 381/413 (92%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MD RFP+SPAEV+KV  +QFGI+SPDEIRQMSVV +E  ETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRKMKC+TC ANMAECPGHFGHLELAKPMFHIGF+K VLSI+RCVC+NCSKILADE+D K
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FKQA++IRNPKNRL+++L+ACKNK KCEGGD IDVQ  +  EPVKKSRGGCGAQQP  +I
Sbjct: 121  FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISI 180

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            +GMK++AEYKM KKKSD+ EQ+PEP ERKQQLSAE+VLS+LKRVSDEDC LLG NP++AR
Sbjct: 181  DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQ L        PSVMMDTSSRSEDDLTHQLAMIIRHN+NL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSIC+RLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 413


>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Fragaria
            vesca subsp. vesca]
          Length = 1842

 Score =  728 bits (1879), Expect = 0.0
 Identities = 352/413 (85%), Positives = 380/413 (92%)
 Frame = -2

Query: 1240 MDTRFPYSPAEVSKVHLIQFGIISPDEIRQMSVVQVEFSETTERGKPKPGGLSDPRLGTI 1061
            MD RFP+SP EV+KV  +QFGI+SPDEIRQMSVVQ+E SET   GKPK  GLSDPRLGTI
Sbjct: 1    MDIRFPFSPCEVAKVRRVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60

Query: 1060 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCYNCSKILADEEDHK 881
            DRKMKC+TCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVC+NCSKIL DE+DHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120

Query: 880  FKQALKIRNPKNRLKRILEACKNKKKCEGGDSIDVQDQEDGEPVKKSRGGCGAQQPTFTI 701
            FK AL+I+NPKNRLK+IL+ACKNK KCEGGD IDVQD +  EP+KKSRGGCGAQQP  TI
Sbjct: 121  FKTALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQDTD--EPLKKSRGGCGAQQPKLTI 178

Query: 700  EGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLLGFNPKYAR 521
            +GMK++AEYK  +KKSD+QEQLPEP ERKQ L+AE+VLSVLKR+SDEDCQLLG NPKYAR
Sbjct: 179  DGMKMVAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 238

Query: 520  PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIIS 341
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNG+PAHIIS
Sbjct: 239  PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 298

Query: 340  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSAR 161
            EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 299  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 358

Query: 160  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKT 2
            TVITPDPNINID+LGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKT
Sbjct: 359  TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKT 411