BLASTX nr result

ID: Achyranthes22_contig00002000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00002000
         (209 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P80470.2|PSBY_SPIOL RecName: Full=Photosystem II core complex...    67   2e-09
dbj|BAJ98138.1| predicted protein [Hordeum vulgare subsp. vulgar...    56   4e-06
gb|AFK39275.1| unknown [Medicago truncatula] gi|388509102|gb|AFK...    55   7e-06
gb|ACJ85605.1| unknown [Medicago truncatula]                           55   7e-06

>sp|P80470.2|PSBY_SPIOL RecName: Full=Photosystem II core complex proteins psbY,
           chloroplastic; AltName: Full=L-arginine-metabolizing
           enzyme; Short=L-AME; Contains: RecName: Full=Photosystem
           II protein psbY-1, chloroplastic; AltName: Full=psbY-A1;
           Contains: RecName: Full=Photosystem II protein psbY-2,
           chloroplastic; AltName: Full=psbY-A2; Flags: Precursor
           gi|3337435|gb|AAC95000.1| PsbY precursor [Spinacia
           oleracea]
          Length = 199

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = +3

Query: 3   LNQLNKMRSEK-AXXXXXXXXXXXXXXXXFSTPEAQAATEEIAKIAENAGSDNRGTLLLF 179
           LNQ+NKMR+EK A                 +TPEAQAA+EEIA+     GSDNRGTLLL 
Sbjct: 118 LNQINKMRNEKKAFIVGLGLSGLATSGLLLATPEAQAASEEIAR-----GSDNRGTLLLL 172

Query: 180 VVLPAIGWV 206
           VVLPAIGWV
Sbjct: 173 VVLPAIGWV 181


>dbj|BAJ98138.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326494406|dbj|BAJ90472.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326515886|dbj|BAJ87966.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 205

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/69 (49%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = +3

Query: 3   LNQLNKMRSEKAXXXXXXXXXXXXXXXXFSTPEAQAATEEIAKIAENA-GSDNRGTLLLF 179
           LNQLNKMRSEKA                     A AA +E+A +A  A   DNRG LLLF
Sbjct: 119 LNQLNKMRSEKALVAGLGIGAAAAAGLAAVPEPASAAVQELAALAAVAPADDNRGLLLLF 178

Query: 180 VVLPAIGWV 206
           VV PA+GWV
Sbjct: 179 VVAPALGWV 187


>gb|AFK39275.1| unknown [Medicago truncatula] gi|388509102|gb|AFK42617.1| unknown
           [Medicago truncatula]
          Length = 202

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/68 (48%), Positives = 40/68 (58%)
 Frame = +3

Query: 3   LNQLNKMRSEKAXXXXXXXXXXXXXXXXFSTPEAQAATEEIAKIAENAGSDNRGTLLLFV 182
           LNQ+N+MR++K                  ST +A A+  E+  IAE AGSDNRG LLLFV
Sbjct: 120 LNQINRMRNDKGVIIGLGLGGGLAASGFVSTQDAIAS--EMTAIAEAAGSDNRGQLLLFV 177

Query: 183 VLPAIGWV 206
           V PAI WV
Sbjct: 178 VTPAILWV 185


>gb|ACJ85605.1| unknown [Medicago truncatula]
          Length = 202

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/68 (48%), Positives = 40/68 (58%)
 Frame = +3

Query: 3   LNQLNKMRSEKAXXXXXXXXXXXXXXXXFSTPEAQAATEEIAKIAENAGSDNRGTLLLFV 182
           LNQ+N+MR++K                  ST +A A+  E+  IAE AGSDNRG LLLFV
Sbjct: 120 LNQINRMRNDKGVIIGLGLGGGLAASGFVSTQDAIAS--EMTAIAEAAGSDNRGQLLLFV 177

Query: 183 VLPAIGWV 206
           V PAI WV
Sbjct: 178 VTPAILWV 185


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