BLASTX nr result

ID: Achyranthes22_contig00001443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00001443
         (654 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theo...    62   1e-07
gb|AFK48333.1| unknown [Medicago truncatula]                           57   5e-06
gb|ESW03384.1| hypothetical protein PHAVU_011G009700g [Phaseolus...    57   6e-06
ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chl...    57   6e-06
ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast pr...    57   6e-06

>gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theobroma cacao]
          Length = 106

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
 Frame = +3

Query: 162 HRRLVITNSVKP---NTVKVSRETTQETTSNGRREXXXXXXXXXXXXXXXXXXXEEPKRG 332
           HRRLV+ N+ K      VK+S ET +E  +NGRRE                   +EPK G
Sbjct: 25  HRRLVVANAAKGAEVERVKLSGETKREC-NNGRRELMFAAAAAAVCSVAGVAAADEPKPG 83

Query: 333 TPAAKKAYNPVCVANPTAKICN 398
           TP A+K Y P+CV  PTA+IC+
Sbjct: 84  TPEARKVYAPICVTMPTARICH 105


>gb|AFK48333.1| unknown [Medicago truncatula]
          Length = 108

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
 Frame = +3

Query: 165 RRLVITNSVKP---NTVKVSRETTQETTSNGRREXXXXXXXXXXXXXXXXXXXEEPKRGT 335
           R+LV+ N+ K      +KV+ +  +E T+  R                     +EPKRG+
Sbjct: 27  RKLVVANAAKAVEGGKMKVNYDNEKEETNGRRNIMFAAAAAAVCSVAGMALAADEPKRGS 86

Query: 336 PAAKKAYNPVCVANPTAKICNY 401
           P AKKAY PVCV  PTA+IC Y
Sbjct: 87  PEAKKAYAPVCVTMPTARICRY 108


>gb|ESW03384.1| hypothetical protein PHAVU_011G009700g [Phaseolus vulgaris]
          Length = 106

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 33/81 (40%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = +3

Query: 165 RRLVITNS---VKPNTVKVSRETTQETTSNGRREXXXXXXXXXXXXXXXXXXXEEPKRGT 335
           RRLV+ N+   V+    K S E  +E  +NGRR                    +EPKRGT
Sbjct: 26  RRLVVANASKAVEGEKTKFSSENDKEG-NNGRRNMMFAAAAAAVCSVAGMSMADEPKRGT 84

Query: 336 PAAKKAYNPVCVANPTAKICN 398
           P AKK Y P+CV  PTA+IC+
Sbjct: 85  PEAKKIYYPICVTMPTARICH 105


>ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 104

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
 Frame = +3

Query: 102 MASFTMXXXXXXXXXXXXXXHRR--LVITNSVKPNTVKVSRETTQ--ETTSNGRREXXXX 269
           MAS TM               RR  +V   S  P   KV+ E  Q  E +S+GRR+    
Sbjct: 1   MASMTMTASFLASTITKPSTPRRSLIVAKASRAPEAEKVTVELKQSKEESSSGRRDLIFA 60

Query: 270 XXXXXXXXXXXXXXXEEPKRGTPAAKKAYNPVCVANPTAKIC 395
                          +EP+RGTPAAKK Y PVCV  PTA+IC
Sbjct: 61  AAAAAACSIAKVAMADEPERGTPAAKKKYAPVCVTMPTARIC 102


>ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223543089|gb|EEF44624.1|
           Photosystem II 5 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 104

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 29/78 (37%), Positives = 39/78 (50%)
 Frame = +3

Query: 165 RRLVITNSVKPNTVKVSRETTQETTSNGRREXXXXXXXXXXXXXXXXXXXEEPKRGTPAA 344
           R LV+ N+            +++ +SNGRR+                   EEPK GTP A
Sbjct: 26  RTLVVANAAAGGQKVKMNHDSEKESSNGRRDLMFAAVAAAACSVAGVAAAEEPKAGTPEA 85

Query: 345 KKAYNPVCVANPTAKICN 398
           KK Y+PVCV  PTA+IC+
Sbjct: 86  KKFYSPVCVTMPTARICH 103


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