BLASTX nr result
ID: Achyranthes22_contig00001255
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00001255
(2045 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [... 674 0.0
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-... 671 0.0
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr... 666 0.0
gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao] 666 0.0
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei... 663 0.0
gb|EMJ20222.1| hypothetical protein PRUPE_ppa004393mg [Prunus pe... 658 0.0
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-... 647 0.0
dbj|BAA88921.1| sigma factor [Nicotiana tabacum] 642 0.0
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-... 642 0.0
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-... 637 e-180
ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-... 636 e-180
ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Popu... 632 e-178
ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutr... 632 e-178
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik... 631 e-178
gb|ESW03465.1| hypothetical protein PHAVU_011G016400g [Phaseolus... 630 e-178
ref|XP_004499502.1| PREDICTED: RNA polymerase sigma factor sigA-... 628 e-177
emb|CBI26421.3| unnamed protein product [Vitis vinifera] 628 e-177
ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-... 624 e-176
ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-... 623 e-175
dbj|BAA88922.1| sigma factor [Nicotiana tabacum] 623 e-175
>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 508
Score = 674 bits (1739), Expect = 0.0
Identities = 352/509 (69%), Positives = 427/509 (83%), Gaps = 10/509 (1%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKLSYASEQ----HQIVPAKNIIVAKKTASF--- 1701
MATAAV+GLSAGKRLLSS+FYYSDLTEKLS A+E +QI K +IVAKK++++
Sbjct: 1 MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGPS 60
Query: 1700 ---HNRGSSSIKALKECIDGATTVPPTSEPWVPRSSPIEGENLDPETTLEALLLLQKSML 1530
NR + SIKALKE +D A+ P T+ + +E E+ D + ++EALLLLQKSML
Sbjct: 61 FPSSNRNTQSIKALKEHVDTASA-PSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSML 119
Query: 1529 EKQLELSFERSSSTDIIRENNPKESHVTSSGIPARARRINARKRSQGKTFPTKDSQRNKP 1350
EKQ LSFER+ S+D + K+ VT SG+ AR RRIN R+++ ++ T + K
Sbjct: 120 EKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQ 179
Query: 1349 LVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKLGCEP 1170
L + VSPELLQNR+ GYV+GV +ELL+HA+VV LSR I+AGLSLE+HK+RLK++LGC+P
Sbjct: 180 LKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDP 239
Query: 1169 SDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGL 990
SDEQ+A S+++ RAE+++K I CSLAREKLAMSNVRLVMSIAQRY+NMGA+MADLVQGGL
Sbjct: 240 SDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 299
Query: 989 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKNK 810
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLP HLHERL LIR+AK +
Sbjct: 300 IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIR 359
Query: 809 LEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSYIADN 630
LEEKG+TPSIDRIAESLN+S KK++NATEAV V SLDREAFPSLNGLPGET+HSYIADN
Sbjct: 360 LEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADN 419
Query: 629 RLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIGLSRE 450
L+NNPWHGVD+WALK+EV+ LI+ +L+ERE++IIRLYYGLD+ESLTWE+ISKRIGLSRE
Sbjct: 420 CLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRE 479
Query: 449 RVRQVGIVALEKLKHAARKRRMEALLVKH 363
RVRQVG+VALEKLKHAARK+++EA+LVKH
Sbjct: 480 RVRQVGLVALEKLKHAARKKKLEAMLVKH 508
>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED: RNA
polymerase sigma factor sigA-like isoform X2 [Citrus
sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED: RNA
polymerase sigma factor sigA-like isoform X3 [Citrus
sinensis]
Length = 508
Score = 671 bits (1730), Expect = 0.0
Identities = 349/511 (68%), Positives = 421/511 (82%), Gaps = 12/511 (2%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKLSY----ASEQHQIVPAKNIIVAKKTASFH-- 1698
MATAAV+GLSAGKRLLSSSFYYSD++EK SY S Q+ KN++ AKK+++++
Sbjct: 2 MATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNPS 61
Query: 1697 ----NRGSSSIKALKECIDGATTVPPTSEPWVPRSSPIEGENLDPETTLEALLLLQKSML 1530
NR + IKALKE +D T T+EPW + IE E+ + + ++EALLLLQKSML
Sbjct: 62 FPSSNRQTQPIKALKEHVD--TNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 119
Query: 1529 EKQLELSFERSSSTDIIRENNPKESHVTSSGIPARARRINARKR--SQGKTFPTKDSQRN 1356
EKQ LSFER+ TD + K+ VT SG+ AR RR+N++K+ SQ K+ P ++ +
Sbjct: 120 EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQNG--S 177
Query: 1355 KPLVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKLGC 1176
K L + +SPEL+QN + GYV+GV +ELLTHA+VV LS+KI+ GLSL++HK RLK++LGC
Sbjct: 178 KQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGC 237
Query: 1175 EPSDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQG 996
EPS EQLAAS+R+ R E+++ L+ECSLAREKL MSNVRLVMSIAQRY+NMGADMADLVQG
Sbjct: 238 EPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQG 297
Query: 995 GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAK 816
GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERL LIR+AK
Sbjct: 298 GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAK 357
Query: 815 NKLEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSYIA 636
+LEEKG+TPS+DRIAE LNMS KK++NATEA+ V SLDREAFPSLNGLPGET+HSYIA
Sbjct: 358 LRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIA 417
Query: 635 DNRLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIGLS 456
DNR++NNPWHGVD+WALK+EV+ LI +L ERER+IIRLYYGLD E LTWE+ISKRIGLS
Sbjct: 418 DNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLS 477
Query: 455 RERVRQVGIVALEKLKHAARKRRMEALLVKH 363
RERVRQVG+VALEKLKHAARK++MEA+LVKH
Sbjct: 478 RERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
gi|557539599|gb|ESR50643.1| hypothetical protein
CICLE_v10031289mg [Citrus clementina]
Length = 508
Score = 666 bits (1719), Expect = 0.0
Identities = 343/509 (67%), Positives = 415/509 (81%), Gaps = 10/509 (1%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKLSY----ASEQHQIVPAKNIIVAKKTASFH-- 1698
MATAAV+GLSAGKRLLSSSFYYSD++EK SY S Q+ KN++ AKK+++++
Sbjct: 2 MATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNPS 61
Query: 1697 ----NRGSSSIKALKECIDGATTVPPTSEPWVPRSSPIEGENLDPETTLEALLLLQKSML 1530
NR + IKALKE +D T T+EPW + IE E+ + + ++EALLLLQKSML
Sbjct: 62 FPSSNRQTQPIKALKEHVD--TNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 119
Query: 1529 EKQLELSFERSSSTDIIRENNPKESHVTSSGIPARARRINARKRSQGKTFPTKDSQRNKP 1350
EKQ LSFER+ TD + K+ VT SG+ AR RR+N++K+ + +K
Sbjct: 120 EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQNGSKQ 179
Query: 1349 LVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKLGCEP 1170
L + +SPEL+QN + GYV+GV +ELLTHA+VV LS+KI+ GLSL++HK RLK++LGCEP
Sbjct: 180 LRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 239
Query: 1169 SDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGL 990
S EQLAAS+R+ R E+++ L+ECSLAREKL MSNVRLVMSIAQRY+NMGADMADL+QGGL
Sbjct: 240 SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLIQGGL 299
Query: 989 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKNK 810
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERL LIR+AK +
Sbjct: 300 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 359
Query: 809 LEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSYIADN 630
LEEKG+TP++DRIAE LNMS KK++NATEA+ V SLDREAFPSLNGLPGET+HSYIADN
Sbjct: 360 LEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 419
Query: 629 RLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIGLSRE 450
R++NNPWHGVD+WALK+EV+ LI +L ERER+IIRLYYGLD E LTWE+ISKRIGLSRE
Sbjct: 420 RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 479
Query: 449 RVRQVGIVALEKLKHAARKRRMEALLVKH 363
RVRQVG+VALEKLKHAARK++MEA+LVKH
Sbjct: 480 RVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]
Length = 508
Score = 666 bits (1718), Expect = 0.0
Identities = 354/511 (69%), Positives = 422/511 (82%), Gaps = 12/511 (2%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKLSYA----SEQHQIVPAKNIIVAKKTASFH-- 1698
MATAAV+GL+ GKRLLSSSF YSD+ EKLSYA S HQ K++IVAKK+++
Sbjct: 2 MATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCSQS 61
Query: 1697 ----NRGSSSIKALKECIDGATTVPPTSEPWVPRSSPIEGENLDPETTLEALLLLQKSML 1530
NR + SIKALKE +D A+ V T+EP S+ +E E+ D + ++EALLLLQKSML
Sbjct: 62 LPSSNRRAQSIKALKEHVDSASIVS-TAEPLFQGSNDLEVESYDLDYSVEALLLLQKSML 120
Query: 1529 EKQLELSFERSSSTDIIRENNPKESHVTSSGIPARARRINARKRS--QGKTFPTKDSQRN 1356
EKQ LSFER+ T+ K+ VT SG+ AR RR N +++ Q K+ ++
Sbjct: 121 EKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPNA--- 177
Query: 1355 KPLVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKLGC 1176
K L + +SPELLQ+R+ GYV+GV DELL+HA+VV LS+KI+AGLSLEEH+ RLK++LGC
Sbjct: 178 KQLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGC 237
Query: 1175 EPSDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQG 996
EPSDEQLA S+++ RAE+R+KLIECSLAREKLAMSNVRLVMSIAQRY+NMGA+M+DL+QG
Sbjct: 238 EPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQG 297
Query: 995 GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAK 816
GLIGLLRGIEKFDSSKG+KISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL LIR+AK
Sbjct: 298 GLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAK 357
Query: 815 NKLEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSYIA 636
+LEEKGITP+IDRIAESLNMS KK++NATEAV V SLDR+AFPSLNGLPGET+HSYIA
Sbjct: 358 IRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIA 417
Query: 635 DNRLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIGLS 456
DN ++N PWHGVDEWALK+EV+ LI +L ERER+IIRLYYGLD ESLTWE+ISKRIGLS
Sbjct: 418 DNHVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLS 477
Query: 455 RERVRQVGIVALEKLKHAARKRRMEALLVKH 363
RERVRQVG+VALEKLKHAARK++MEA+LVKH
Sbjct: 478 RERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
1 family protein [Populus trichocarpa]
Length = 509
Score = 663 bits (1711), Expect = 0.0
Identities = 345/509 (67%), Positives = 416/509 (81%), Gaps = 10/509 (1%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKLSYASEQ----HQIVPAKNIIVAKKTASF--- 1701
MATAAV+GLS+GKRLLSSSFYYSDLTEKLS ++ + KN+IVAKK++++
Sbjct: 2 MATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTKNVIVAKKSSNYGPS 61
Query: 1700 ---HNRGSSSIKALKECIDGATTVPPTSEPWVPRSSPIEGENLDPETTLEALLLLQKSML 1530
NR S SIKALKE +D A+ + W E E+ + ++EALLLLQKSML
Sbjct: 62 FPSSNRNSHSIKALKEHVDTASASSNVAT-WFKTFDDFEEESSALDYSVEALLLLQKSML 120
Query: 1529 EKQLELSFERSSSTDIIRENNPKESHVTSSGIPARARRINARKRSQGKTFPTKDSQRNKP 1350
EKQ LSFER++S+D + N K+ VT SG+ AR RR+N R+++Q ++ S K
Sbjct: 121 EKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKF 180
Query: 1349 LVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKLGCEP 1170
L + SP+LLQNR+ GYV+GV DE+L H +VV LSR I AGLS E+HK+RLK++LGCEP
Sbjct: 181 LRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCEP 240
Query: 1169 SDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGL 990
SDEQ+A S+R+ RA++++KLI+CSLAREKLAMSNVRLVMSIAQ+Y+NMGA+MADLVQGGL
Sbjct: 241 SDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGGL 300
Query: 989 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKNK 810
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALV+NSRTLRLP HLHERL LIR+AK +
Sbjct: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIR 360
Query: 809 LEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSYIADN 630
LEEKG+TPSIDRIAESLNMS +K++NATEA+ V SLDREAFPSLNGLPGET+HSYIADN
Sbjct: 361 LEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420
Query: 629 RLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIGLSRE 450
R +NNPWHGVDEWALK EV+ LID++L+ERE++IIRLY+GLD E LTWE+ISKR+GLSRE
Sbjct: 421 RPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSRE 480
Query: 449 RVRQVGIVALEKLKHAARKRRMEALLVKH 363
RVRQVG+VALEKLKHAARKR EA+LVKH
Sbjct: 481 RVRQVGLVALEKLKHAARKRNTEAMLVKH 509
>gb|EMJ20222.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
Length = 512
Score = 658 bits (1698), Expect = 0.0
Identities = 342/511 (66%), Positives = 409/511 (80%), Gaps = 12/511 (2%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKLSYASEQHQIV-----PAKNIIVAKKTASFH- 1698
MATAAV+GLS GKRLL+SSFYYSD+TEKL + ++ H + KN++ A+K ++
Sbjct: 2 MATAAVIGLSTGKRLLNSSFYYSDITEKLFHLNDHHGFLHCHFSSTKNVVTARKPSNCSS 61
Query: 1697 -----NRGSSSIKALKECIDGATTVPPTSEPWVPRSSPIEGENLDPETTLEALLLLQKSM 1533
NR SI+ALKE + A+ ++ W + +E E+ D E ++EALLLLQKSM
Sbjct: 62 RFPSSNRPQQSIRALKEHVQTASAPSSATQQWFQELNDLEEESSDLEYSVEALLLLQKSM 121
Query: 1532 LEKQLELSFERSSSTDIIRENNPKESHVTSSGIPARARRINARKRSQ-GKTFPTKDSQRN 1356
LEKQ LSFE+ D + K+ VT SG+ AR RR+ + KR K+ N
Sbjct: 122 LEKQWNLSFEKKVLRDSTSKTTDKKIPVTCSGVSARQRRMTSTKRKTFNKSTCVMHPSTN 181
Query: 1355 KPLVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKLGC 1176
KPL A VSPELLQN + GYV+GV ++LLTH +VV LS+KI+ GLS+EEHK+RLK++LGC
Sbjct: 182 KPLRAIVSPELLQNHVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKERLGC 241
Query: 1175 EPSDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQG 996
EPSDEQLA S+R+ RA++++KLIEC LAREKLAMSNVRLVMSIAQRY+NMGA+MADL+QG
Sbjct: 242 EPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADLIQG 301
Query: 995 GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAK 816
GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL LIR+AK
Sbjct: 302 GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAK 361
Query: 815 NKLEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSYIA 636
+LEEKGITPSIDRIAESLNMS KK++NATEA+ V SLDR+AFPSLNGLPGET+HSYIA
Sbjct: 362 IRLEEKGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYIA 421
Query: 635 DNRLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIGLS 456
DNRL+N PWHGVD WALK EVS LI+ L ERE++II+LYYGL++E LTWE+ISKRIGLS
Sbjct: 422 DNRLENIPWHGVDAWALKEEVSKLINMMLGEREKEIIQLYYGLENECLTWEDISKRIGLS 481
Query: 455 RERVRQVGIVALEKLKHAARKRRMEALLVKH 363
RERVRQVG+VALEKLKHAARKR MEA+L+KH
Sbjct: 482 RERVRQVGLVALEKLKHAARKREMEAMLLKH 512
>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
Length = 503
Score = 647 bits (1668), Expect = 0.0
Identities = 339/516 (65%), Positives = 423/516 (81%), Gaps = 17/516 (3%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKLSYASE----QHQIVPAKNIIVAKKTASF--- 1701
MATAAV+GLS GKRLLSSS++YSD+ EKLSY S+ +QIVP K++IVAKK++++
Sbjct: 1 MATAAVIGLSGGKRLLSSSYHYSDIIEKLSYGSDFGSTHYQIVPTKSLIVAKKSSNYTPT 60
Query: 1700 ---HNRGSSSIKALKECIDGATTVPPTSEPWVP--RSSPIEGENLDPETTLEALLLLQKS 1536
N+ + SIKALKE +D A T+ ++PW S+ +E E+ + ++EALLLLQKS
Sbjct: 61 FPASNQQNQSIKALKEHVDDAPTI---ADPWFQSYNSNDLEVESSEMGYSVEALLLLQKS 117
Query: 1535 MLEKQLELSFERSSSTDIIRENNPKESH-----VTSSGIPARARRINARKRSQGKTFPTK 1371
MLEKQ LSFER +++ EN+ K VT SG+ AR RR+N ++++ KT
Sbjct: 118 MLEKQWNLSFER----EVLTENSSKGKKCRKVAVTCSGVSARQRRMNTKRKTAIKTCGAM 173
Query: 1370 DSQRNKPLVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLK 1191
L + +SPELLQ+R+ GYV+G+ +ELL+HA+VV+LS KI+ GLSLEEHK+RLK
Sbjct: 174 Q------LKSKISPELLQHRLKGYVKGLVSEELLSHAEVVNLSEKIKVGLSLEEHKSRLK 227
Query: 1190 DKLGCEPSDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMA 1011
+KLGCEPSD+Q+A S+++ R E+R ++IECSLAREKLAMSNVRLVMSIAQ+Y+N+GA+M
Sbjct: 228 EKLGCEPSDDQMATSLKISRTELRARMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMG 287
Query: 1010 DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSL 831
DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLSL
Sbjct: 288 DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSL 347
Query: 830 IRSAKNKLEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETY 651
IR+AK +LEE+GITP+IDRIA+ LNMS KK++NATEA+ ++SLDREAFPSLNGL GET+
Sbjct: 348 IRNAKFRLEERGITPTIDRIAKYLNMSQKKVRNATEAISKIISLDREAFPSLNGLQGETH 407
Query: 650 HSYIADNRLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISK 471
HSYIADNR++N PW+GVDEWALK+EV+ LI+ +L ERER+IIRLYYGL+ E LTWE+ISK
Sbjct: 408 HSYIADNRVENIPWNGVDEWALKDEVNRLINVTLVEREREIIRLYYGLEKECLTWEDISK 467
Query: 470 RIGLSRERVRQVGIVALEKLKHAARKRRMEALLVKH 363
RIGLSRERVRQVG+VALEKLKHAARKR+MEA+L+KH
Sbjct: 468 RIGLSRERVRQVGLVALEKLKHAARKRQMEAMLLKH 503
>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
Length = 508
Score = 642 bits (1657), Expect = 0.0
Identities = 331/508 (65%), Positives = 408/508 (80%), Gaps = 10/508 (1%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKLSYASEQ----HQIVPAKNIIVAKKTASFH-- 1698
M+TAAV+GLSAGKRLLSSSFYYSDL EKL+ S+ H + KN+I AKK++ +
Sbjct: 2 MSTAAVIGLSAGKRLLSSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSSDYSPS 61
Query: 1697 ---NRGSSSIKALKECIDGATTVPPTSEP-WVPRSSPIEGENLDPETTLEALLLLQKSML 1530
+R S S K+LKE +D T P+ P W ++ E+ D + ++E LLLLQKSML
Sbjct: 62 CVSSRKSQSAKSLKEHVD--ITADPSDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSML 119
Query: 1529 EKQLELSFERSSSTDIIRENNPKESHVTSSGIPARARRINARKRSQGKTFPTKDSQRNKP 1350
EKQ LS E++ + E K+ H+T SG AR RR+++R+R + + KP
Sbjct: 120 EKQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTSAAKP 179
Query: 1349 LVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKLGCEP 1170
L + + PELLQNR+ GYV+GV +ELLTHA+V+ LS+KI+ GL LEE K+RLK++LGCEP
Sbjct: 180 LRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCEP 239
Query: 1169 SDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGL 990
SD+QLA S++M R ++++ LIECSLARE+LAMSNVRLVMSIAQRY+N+GA+MADLVQGGL
Sbjct: 240 SDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQGGL 299
Query: 989 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKNK 810
IGLLRGIEKFD SKG+KISTYVYWWIRQGVSRALVENSRTLRLPT+LHERLSLIR+AK +
Sbjct: 300 IGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAKAR 359
Query: 809 LEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSYIADN 630
LEEKGITPS++ IA SLNMS KK++NATEA + SLDREAFPSLNGLPGET HSYIADN
Sbjct: 360 LEEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIADN 419
Query: 629 RLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIGLSRE 450
L+NNPWHGVD WALK+EV+NLI ++LR+RER+IIRLYYGLD+E LTWE+ISKRIGLSRE
Sbjct: 420 HLENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGLSRE 479
Query: 449 RVRQVGIVALEKLKHAARKRRMEALLVK 366
RVRQVG+VALEKLKHAARKR+++A+L+K
Sbjct: 480 RVRQVGLVALEKLKHAARKRQLDAMLIK 507
>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
polymerase sigma factor sigA-like [Cucumis sativus]
Length = 508
Score = 642 bits (1655), Expect = 0.0
Identities = 337/510 (66%), Positives = 415/510 (81%), Gaps = 11/510 (2%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKLSYASE----QHQIVPAKNIIVAKKTASFHNR 1692
MATAA++GL A KRLL+SS YYSD TEK+ YA++ Q Q+ +K++++AK +A+F R
Sbjct: 2 MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPR 61
Query: 1691 GSSS-------IKALKECIDGATTVPPTSEPWVPRSSPIEGENLDPETTLEALLLLQKSM 1533
SS IKA+KE ++ T P +EPW +S E E + + T+EALLLLQKSM
Sbjct: 62 YPSSNRHSQQCIKAVKEHVE--TPSSPIAEPWHNTTS-WEDEETELKYTVEALLLLQKSM 118
Query: 1532 LEKQLELSFERSSSTDIIRENNPKESHVTSSGIPARARRINARKRSQGKTFPTKDSQRNK 1353
LEKQ LSFE++ STD +E K+ VT SG+ AR RR++++++ Q K + +K
Sbjct: 119 LEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISK 178
Query: 1352 PLVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKLGCE 1173
L T+SPELLQNR+ GYV+G+ +ELL+HA+VV LS+KI+ GL+LEE K RLK +LGCE
Sbjct: 179 QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCE 238
Query: 1172 PSDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGG 993
PS++QLA S+++ RAE+R++++E SLAREKLAMSNVRLVMSIAQRY+NMGA+MADLVQGG
Sbjct: 239 PSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 298
Query: 992 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKN 813
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL LIR+AK
Sbjct: 299 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV 358
Query: 812 KLEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSYIAD 633
KL+EKGITPS+DRIAESLNMS KK++NATEA+ V SLDREAFPSLNGLPGET+HSYIAD
Sbjct: 359 KLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 418
Query: 632 NRLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIGLSR 453
N L+NNPWHG D W LK EV+ LI+ +L +RER+IIRLY+GLD+E LTWEEISKRIGLSR
Sbjct: 419 NCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 478
Query: 452 ERVRQVGIVALEKLKHAARKRRMEALLVKH 363
ERVRQVG+VALEKLK AA+ R+MEA+L+KH
Sbjct: 479 ERVRQVGLVALEKLKKAAKTRKMEAMLLKH 508
>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
lycopersicum]
Length = 509
Score = 637 bits (1642), Expect = e-180
Identities = 329/508 (64%), Positives = 402/508 (79%), Gaps = 10/508 (1%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKLSYASEQ----HQIVPAKNIIVAKKTASFH-- 1698
MAT AV+GLSAGKRLLSSSFYYSDL EKLS +S+ HQ+ KN+I AKK++ +
Sbjct: 2 MATTAVIGLSAGKRLLSSSFYYSDLNEKLSCSSDHSLPCHQVPTVKNVISAKKSSDYSPS 61
Query: 1697 ---NRGSSSIKALKECIDGATTVPPTSEPWVPRSSPIEGENLDPET-TLEALLLLQKSML 1530
+R S+KALKE +D A+ P + W R ++ E+ D E ++E LLLLQKSML
Sbjct: 62 CVSSRKLQSVKALKEHVDIASD-PSDVQSWFERFEQLQNESDDEEDDSVEVLLLLQKSML 120
Query: 1529 EKQLELSFERSSSTDIIRENNPKESHVTSSGIPARARRINARKRSQGKTFPTKDSQRNKP 1350
EKQ LS E + + R+ N K+ H+ SG AR RR+++R+R + KP
Sbjct: 121 EKQWNLSAEETLTASTQRKKNCKKMHIACSGTSARRRRMDSRQRVLAQKSSATPISATKP 180
Query: 1349 LVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKLGCEP 1170
L + + P+LLQNR+ GYV+G+ +ELLTH +V+ LS+KI+ GL +EE K+RLK++LGCEP
Sbjct: 181 LRSILGPDLLQNRLKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEEQKSRLKERLGCEP 240
Query: 1169 SDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGL 990
SD+QLA S++M R ++++ LIECSLARE+L+MSNVRLVMSIAQRY+NMGA+MADLVQGGL
Sbjct: 241 SDDQLAVSLKMSRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLVQGGL 300
Query: 989 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKNK 810
IGLLRGIEKFD SKG+KISTYVYWWIRQGVSR LVENSRTLRLPTHLHERL LIR+AK +
Sbjct: 301 IGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRTLVENSRTLRLPTHLHERLGLIRNAKMR 360
Query: 809 LEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSYIADN 630
LEEKGI PS++ IA SLNMS KK++NATEA V SLDRE FPSLNGLPG T HSYIADN
Sbjct: 361 LEEKGINPSVNNIAASLNMSQKKVRNATEASSKVYSLDREVFPSLNGLPGTTLHSYIADN 420
Query: 629 RLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIGLSRE 450
L+NNPWHGVD WALK+EV+NLI ++LRERER+IIRLYYGLD E LTWE+ISKRIGLSRE
Sbjct: 421 HLENNPWHGVDVWALKDEVNNLISSTLREREREIIRLYYGLDSECLTWEDISKRIGLSRE 480
Query: 449 RVRQVGIVALEKLKHAARKRRMEALLVK 366
RVRQVG+VALEKLKHAARKRR++A+L+K
Sbjct: 481 RVRQVGLVALEKLKHAARKRRLDAMLIK 508
>ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Glycine
max] gi|571478813|ref|XP_006587676.1| PREDICTED: RNA
polymerase sigma factor sigA-like isoform X2 [Glycine
max]
Length = 503
Score = 636 bits (1641), Expect = e-180
Identities = 332/512 (64%), Positives = 418/512 (81%), Gaps = 13/512 (2%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKLSYASE----QHQIVPAKNIIVAKKTASF--- 1701
MATAAV+GLS GKRLLSSS++YSD+ EKLSY S+ +QIVP K++I AKK++++
Sbjct: 1 MATAAVIGLSGGKRLLSSSYHYSDVIEKLSYGSDFGSTHYQIVPTKSLIAAKKSSNYTPT 60
Query: 1700 ---HNRGSSSIKALKECIDGATTVPPTSEPWVP--RSSPIEGENLDPETTLEALLLLQKS 1536
N+ + SIKALKE +D A T+ ++ W S+ +E E+ + ++EALLLLQKS
Sbjct: 61 FPASNQQNQSIKALKEHVDDAPTI---ADSWFQSCNSNDLEVESSEMGYSVEALLLLQKS 117
Query: 1535 MLEKQLELSFERSSSTDIIRENNP-KESHVTSSGIPARARRINARKRSQGKTFPTKDSQR 1359
MLEKQ LSFER T+ + K+ VT SG+ AR RR+N ++++ KT
Sbjct: 118 MLEKQWNLSFEREVLTEHSSKGKKCKKVAVTCSGVSARQRRMNTKRKTAIKTCGAMQ--- 174
Query: 1358 NKPLVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKLG 1179
L + +SPELLQ+R+ GYV+G+ +ELL+HA+VV+LS +I+ GLSLEEHK+RLK++LG
Sbjct: 175 ---LKSKISPELLQHRLKGYVKGIVSEELLSHAEVVNLSERIKVGLSLEEHKSRLKERLG 231
Query: 1178 CEPSDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQ 999
CEPSD+Q+A S+++ R E+R ++IEC+LAREKLAMSNVRLVMSIAQ+Y+N+GA+M DLVQ
Sbjct: 232 CEPSDDQMAISLKISRTELRARMIECTLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQ 291
Query: 998 GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSA 819
GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLSLIR+A
Sbjct: 292 GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNA 351
Query: 818 KNKLEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSYI 639
K +LEE+GITP+IDRIA+ LNMS KK++NATEA+ +SLDREAFPSLNG+ GET+HSYI
Sbjct: 352 KFRLEERGITPTIDRIAKYLNMSQKKVRNATEAISKTISLDREAFPSLNGIQGETHHSYI 411
Query: 638 ADNRLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIGL 459
AD+R++N PW+GVDEWALK+EV+ LI+ +L ERER+IIRLYYGLD E LTWE+ISKRIGL
Sbjct: 412 ADDRVENIPWNGVDEWALKDEVNKLINVTLVEREREIIRLYYGLDKEGLTWEDISKRIGL 471
Query: 458 SRERVRQVGIVALEKLKHAARKRRMEALLVKH 363
SRERVRQVG+VALEKLKHAARKR+MEA+L+KH
Sbjct: 472 SRERVRQVGLVALEKLKHAARKRQMEAMLLKH 503
>ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
gi|550325184|gb|EEE95160.2| hypothetical protein
POPTR_0013s07290g [Populus trichocarpa]
Length = 499
Score = 632 bits (1631), Expect = e-178
Identities = 332/509 (65%), Positives = 407/509 (79%), Gaps = 10/509 (1%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKLSYASEQ----HQIVPAKNIIVAKKTASF--- 1701
MATA+ +GL+ GKRLLSSSFY+SDLTEKLS ++ +QI K++IVAKK++ +
Sbjct: 2 MATASFIGLTTGKRLLSSSFYFSDLTEKLSNVNDHGVAHYQITTTKSVIVAKKSSKYGPS 61
Query: 1700 ---HNRGSSSIKALKECIDGATTVPPTSEPWVPRSSPIEGENLDPETTLEALLLLQKSML 1530
R S KALKE ID A+ T W E E+ + ++EAL+LLQKSML
Sbjct: 62 FPSSYRNPHSNKALKELIDTASA-SSTVATWFKTLDDFEEESSVLDYSVEALILLQKSML 120
Query: 1529 EKQLELSFERSSSTDIIRENNPKESHVTSSGIPARARRINARKRSQGKTFPTKDSQRNKP 1350
EKQ LSFE +S+D + + K+ VT SG+ AR RR+N ++++Q ++
Sbjct: 121 EKQWNLSFESINSSDSKIKKSNKKIPVTCSGVSARQRRLNNKRKNQNQS----------K 170
Query: 1349 LVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKLGCEP 1170
++ +SP+LL NR+ GYV+GV DE+L H +VV LSR I AGLSLE+HK+ LK++LGCEP
Sbjct: 171 FMSDISPDLLLNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLKERLGCEP 230
Query: 1169 SDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGL 990
SDEQLA S+R+ RA+++++LI+CSLAREKLAMSNVRLVMSIAQ+ +NMGA+MADLVQ GL
Sbjct: 231 SDEQLADSLRISRADLQSQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAEMADLVQAGL 290
Query: 989 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKNK 810
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVEN RTLRLP HLHERL LIR+AK +
Sbjct: 291 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENPRTLRLPNHLHERLGLIRNAKIR 350
Query: 809 LEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSYIADN 630
LEEKG+TPSIDRIAESLNMS +K++NATEA+ V SLDREAFPSLNGLPGET+HSYIADN
Sbjct: 351 LEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 410
Query: 629 RLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIGLSRE 450
RL+NNPWHGVDEWALK EV+ LID++L+ERER+IIRLY+GLD E LTWE+ISKR+GLSRE
Sbjct: 411 RLENNPWHGVDEWALKEEVNKLIDSALQEREREIIRLYHGLDKECLTWEDISKRMGLSRE 470
Query: 449 RVRQVGIVALEKLKHAARKRRMEALLVKH 363
RVRQVG+VALEKLKHAARK ++EA+LVKH
Sbjct: 471 RVRQVGLVALEKLKHAARKGKLEAMLVKH 499
>ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutrema salsugineum]
gi|557097090|gb|ESQ37598.1| hypothetical protein
EUTSA_v10002486mg [Eutrema salsugineum]
Length = 519
Score = 632 bits (1629), Expect = e-178
Identities = 338/525 (64%), Positives = 416/525 (79%), Gaps = 26/525 (4%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKL----SYASEQHQIVPAKNIIVAKKTASFHN- 1695
MATAAV+GL+AGKRLLSSSFYYSD+TEK + S Q+ I ++ I AKKT S +
Sbjct: 2 MATAAVIGLNAGKRLLSSSFYYSDVTEKFLSVNDHCSSQYHIASTRSGITAKKTPSSSSN 61
Query: 1694 ---------RGSSSIKALKECIDGATTVPPTSEPWVPRSSP--IEGENLDPET--TLEAL 1554
R + S KALKE +D V + +PW+P S +EGE+ + + ++EAL
Sbjct: 62 YSPSLPSSSRHTQSAKALKETVD---VVASSVQPWLPPGSDKEMEGESYEDDLGHSVEAL 118
Query: 1553 LLLQKSMLEKQLELSFERSSSTD------IIRENNPKESHVTSSGIPARARRINARKRSQ 1392
LLLQKSMLEKQ LSFE++++++ + R+ NP VT SGI AR RRI A+K++
Sbjct: 119 LLLQKSMLEKQWNLSFEKAATSESPSKKRMTRKKNP----VTCSGISARQRRIGAKKKTN 174
Query: 1391 -GKTFPTKDSQRNKPLVATVSPELLQN-RMMGYVRGVTCDELLTHAQVVSLSRKIEAGLS 1218
+ K + + ++ EL QN R+ GYVRGV +++L+HA+VV LS+KI++GL
Sbjct: 175 MSHVKVVSEVSSGKQVKSVINSELFQNNRVKGYVRGVVSEDVLSHAEVVRLSKKIKSGLR 234
Query: 1217 LEEHKARLKDKLGCEPSDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQR 1038
L++HK+RLKD+LGCEPSDEQLA S+++ R E++ L+EC LAREKLAMSNVRLVMSIAQR
Sbjct: 235 LDDHKSRLKDRLGCEPSDEQLAISLKISRGELQAWLMECHLAREKLAMSNVRLVMSIAQR 294
Query: 1037 YENMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP 858
Y+NMGA+M+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLP
Sbjct: 295 YDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLP 354
Query: 857 THLHERLSLIRSAKNKLEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPS 678
THLHERL LIR+AK +L+EKGITPSIDRIAESLNMS KK++NATEAV + SLDR+AFPS
Sbjct: 355 THLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKIFSLDRDAFPS 414
Query: 677 LNGLPGETYHSYIADNRLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDE 498
LNGLPGET+HSYIADNRL+NNPWHG DEWALK+EVS LI +L ERER+IIRLYYGLD E
Sbjct: 415 LNGLPGETHHSYIADNRLENNPWHGYDEWALKDEVSKLISATLGEREREIIRLYYGLDKE 474
Query: 497 SLTWEEISKRIGLSRERVRQVGIVALEKLKHAARKRRMEALLVKH 363
LTWE+ISKRIGLSRERVRQVG+VALEKLKHAARKR+MEA+++K+
Sbjct: 475 CLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 519
>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
vinifera]
Length = 497
Score = 631 bits (1627), Expect = e-178
Identities = 345/510 (67%), Positives = 406/510 (79%), Gaps = 11/510 (2%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKLS-YASE----QHQIVPAKNIIVAKKTASF-- 1701
M TAAV+GLSAG RLL+SS +YSD+ EKLS Y ++ H P KN+I AKK +++
Sbjct: 2 MGTAAVIGLSAGNRLLASSHHYSDVAEKLSSYVNDVGFPHHPSPPPKNLISAKKPSNYTP 61
Query: 1700 -HNRGSSSIKALKECIDGATTVPPTSEPWVPRSSPIEGENLDPETTLEALLLLQKSMLEK 1524
NR S+KALKE ++ A+ P T++P + SS E D E +EA LLLQKSMLEK
Sbjct: 62 SSNRSIQSMKALKEHVESASA-PSTADPDLSSSS---SEVEDEEYLVEAFLLLQKSMLEK 117
Query: 1523 QLELSFERSSST---DIIRENNPKESHVTSSGIPARARRINARKRSQGKTFPTKDSQRNK 1353
Q LSFE D+ ++ K VT SG AR RRI+ RKR + K R +
Sbjct: 118 QWNLSFEEEEEEEEEDMGKKARQKRREVTCSGTSARQRRISGRKRVMNE----KSKSRVR 173
Query: 1352 PLVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKLGCE 1173
+ ++NR+ GYV+GV +ELLTHAQVV LS KI+AGL LE+HK+RLK+++G E
Sbjct: 174 AALG------VENRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSE 227
Query: 1172 PSDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGG 993
P+DEQ+AAS+RM RAE+++KLIECSLAREKLAMSNVRLVMSIAQRY+NMGA+MADLVQGG
Sbjct: 228 PTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 287
Query: 992 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKN 813
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP+HLHERLSLIR+AK
Sbjct: 288 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKI 347
Query: 812 KLEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSYIAD 633
+LEEKGITPSIDRIAE LNMS KK++NATEA+ V SLDREAFPSLNGLPGET HSYIAD
Sbjct: 348 RLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIAD 407
Query: 632 NRLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIGLSR 453
RL+NNPWHGVDEWALK+EV+ LI+T+L ERERDIIRLYYGLD+E LTWE+ISKRIGLSR
Sbjct: 408 VRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSR 467
Query: 452 ERVRQVGIVALEKLKHAARKRRMEALLVKH 363
ERVRQVG+VALEKLK+AARK RMEA+LVK+
Sbjct: 468 ERVRQVGLVALEKLKNAARKGRMEAMLVKY 497
>gb|ESW03465.1| hypothetical protein PHAVU_011G016400g [Phaseolus vulgaris]
Length = 504
Score = 630 bits (1625), Expect = e-178
Identities = 331/513 (64%), Positives = 411/513 (80%), Gaps = 14/513 (2%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKLSYASE----QHQIVPAKNIIVAKKTASFH-- 1698
MA+AAV+GLS GKRLLSSS++YSD+ EKLSY S+ +QIV K++IVAKK++++
Sbjct: 1 MASAAVIGLSGGKRLLSSSYHYSDIIEKLSYGSDFGSTHYQIVSTKSVIVAKKSSNYTPT 60
Query: 1697 ----NRGSSSIKALKECIDGATTVPPTSEPWVPR--SSPIEGENLDPETTLEALLLLQKS 1536
NR + SIK LKE +D A TV ++ W S+ +E E+ + ++EALLLLQKS
Sbjct: 61 FPAPNRQNQSIKVLKEIVDDAATV---ADAWFQSLSSNDLEVESSEMGYSVEALLLLQKS 117
Query: 1535 MLEKQLELSFERSSSTDII--RENNPKESHVTSSGIPARARRINARKRSQGKTFPTKDSQ 1362
MLEKQ LSFE T+ +N K + VT SG+ AR RR+NA++++ KT
Sbjct: 118 MLEKQWSLSFEGEGVTEHSSKEKNCRKVAAVTCSGVSARQRRMNAKRKTAVKTGGAVQ-- 175
Query: 1361 RNKPLVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKL 1182
L + +SPELLQNR+ GYV+GV +ELL+HAQVVSLS KI+ GLSLEEHK+R+K++L
Sbjct: 176 ----LKSKISPELLQNRLKGYVKGVVSEELLSHAQVVSLSEKIKVGLSLEEHKSRMKERL 231
Query: 1181 GCEPSDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLV 1002
GCEPSD+++A S+++ E+R K++ECSLAREKLAMSNVRLVMSIAQRYEN G +M DLV
Sbjct: 232 GCEPSDDEIATSLKISSTELREKMLECSLAREKLAMSNVRLVMSIAQRYENAGTEMGDLV 291
Query: 1001 QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRS 822
QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+AL+ENSRTLRLP HLHERLSLIR+
Sbjct: 292 QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALIENSRTLRLPAHLHERLSLIRN 351
Query: 821 AKNKLEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSY 642
AK +LEE+GITP+IDRIA+ LNMS KK++NATEA+ +SLDREAFPSLNGL G+T+HSY
Sbjct: 352 AKLRLEERGITPTIDRIAQHLNMSQKKVRNATEAISKTISLDREAFPSLNGLRGDTHHSY 411
Query: 641 IADNRLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIG 462
IADNR++N PW GVDEWALK+EV+ LI+ +L+ERER+IIRLYYGL E LTWE+ISKR+G
Sbjct: 412 IADNRVENIPWEGVDEWALKDEVNRLINVTLKEREREIIRLYYGLGKECLTWEDISKRMG 471
Query: 461 LSRERVRQVGIVALEKLKHAARKRRMEALLVKH 363
LSRERVRQVG+VALEKLKH AR R +EA+L+KH
Sbjct: 472 LSRERVRQVGLVALEKLKHGARNRELEAMLLKH 504
>ref|XP_004499502.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Cicer
arietinum] gi|502126947|ref|XP_004499503.1| PREDICTED:
RNA polymerase sigma factor sigA-like isoform X2 [Cicer
arietinum]
Length = 513
Score = 628 bits (1619), Expect = e-177
Identities = 333/519 (64%), Positives = 409/519 (78%), Gaps = 20/519 (3%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKL----SYASEQHQIVPAKNIIVAKK------T 1710
MATAAV+GLS GKRLLSSS++YSD+ EK + S Q+ + P+K++I +KK T
Sbjct: 1 MATAAVIGLSGGKRLLSSSYHYSDVIEKFYHSCDFGSSQYHLPPSKSVIFSKKSSKCAPT 60
Query: 1709 ASFHNRGSSSIKALKE---CIDGATTVPPTSEPWVPRSSP------IEGENLDPETTLEA 1557
S NR + SIKALKE +DGA T S+PW+ S +E E D +++
Sbjct: 61 FSASNRQNHSIKALKEHVVVVDGAPTSIANSKPWIQGCSNSNNDLGLEVETSDIGYSVDT 120
Query: 1556 LLLLQKSMLEKQLELSFERSSSTD-IIRENNPKESHVTSSGIPARARRINARKRSQGKTF 1380
LLL+QKSMLEKQ LSFE T+ R + ++ VT SG+ AR RR N +K+ K
Sbjct: 121 LLLMQKSMLEKQWCLSFESEVLTENSTRAKSRRKVTVTCSGMSARQRRTNTKKKITSK-- 178
Query: 1379 PTKDSQRNKPLVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKA 1200
S + L +T+SPELLQNR+ GYV+G+ +ELL+HAQVV LS+KI+AGLSL+EHK+
Sbjct: 179 ----SGYARKLRSTISPELLQNRLKGYVKGIVSEELLSHAQVVKLSQKIKAGLSLDEHKS 234
Query: 1199 RLKDKLGCEPSDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGA 1020
RLK++LGCEPSD+Q+A S+++ RAE+R K+IECSLAREKL MSNVRLVMSIAQRY+NMGA
Sbjct: 235 RLKERLGCEPSDDQVATSLKISRAELRAKIIECSLAREKLTMSNVRLVMSIAQRYDNMGA 294
Query: 1019 DMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHER 840
+MADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLH+R
Sbjct: 295 EMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHDR 354
Query: 839 LSLIRSAKNKLEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPG 660
LSLIR+A+ +LEE+GITP+IDRIA+ LNMS KK++NATEA+ V S+DREAFPSLNGLPG
Sbjct: 355 LSLIRNAEYRLEERGITPTIDRIAKCLNMSPKKVRNATEAINKVFSIDREAFPSLNGLPG 414
Query: 659 ETYHSYIADNRLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEE 480
+T+H++IAD R +N PW+GVDEW LK EV+ LI+ +L ERER+I+RLYYGLD LTWE+
Sbjct: 415 DTHHNFIADKRFENIPWNGVDEWILKEEVNRLINVTLVEREREIVRLYYGLDKACLTWED 474
Query: 479 ISKRIGLSRERVRQVGIVALEKLKHAARKRRMEALLVKH 363
ISKRIGLSRERVRQVG+VALEKLKH ARKR MEA+L+KH
Sbjct: 475 ISKRIGLSRERVRQVGLVALEKLKHEARKREMEAMLLKH 513
>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 628 bits (1619), Expect = e-177
Identities = 351/562 (62%), Positives = 429/562 (76%), Gaps = 8/562 (1%)
Frame = -1
Query: 2024 IILLFLYSQSQTV*TANNIENSLFSLSLTVEISVVSLSF*SIKSITIYTLKFRLNMATAA 1845
+I+ ++ ++ ++N S ++++ +S +L + I+I+ L+ + M TAA
Sbjct: 19 VIIFAKIKENPSLVSSNFPPTSSPPITISSFLSFTALFSSPLPLISIWVLQSHM-MGTAA 77
Query: 1844 VVGLSAGKRLLSSSFYYSDLTEKLS-YASE----QHQIVPAKNIIVAKKTASF---HNRG 1689
V+GLSAG RLL+SS +YSD+ EKLS Y ++ H P KN+I AKK +++ NR
Sbjct: 78 VIGLSAGNRLLASSHHYSDVAEKLSSYVNDVGFPHHPSPPPKNLISAKKPSNYTPSSNRS 137
Query: 1688 SSSIKALKECIDGATTVPPTSEPWVPRSSPIEGENLDPETTLEALLLLQKSMLEKQLELS 1509
S+KALKE ++ A+ P T++P + SS E D E +EA LLLQKSMLEKQ LS
Sbjct: 138 IQSMKALKEHVESASA-PSTADPDLSSSS---SEVEDEEYLVEAFLLLQKSMLEKQWNLS 193
Query: 1508 FERSSSTDIIRENNPKESHVTSSGIPARARRINARKRSQGKTFPTKDSQRNKPLVATVSP 1329
F+ K VT SG AR RRI+ RKR + K R + +
Sbjct: 194 FKARQ----------KRREVTCSGTSARQRRISGRKRVMNE----KSKSRVRAALG---- 235
Query: 1328 ELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKLGCEPSDEQLAA 1149
++NR+ GYV+GV +ELLTHAQVV LS KI+AGL LE+HK+RLK+++G EP+DEQ+AA
Sbjct: 236 --VENRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSEPTDEQVAA 293
Query: 1148 SVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGLLRGI 969
S+RM RAE+++KLIECSLAREKLAMSNVRLVMSIAQRY+NMGA+MADLVQGGLIGLLRGI
Sbjct: 294 SLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGI 353
Query: 968 EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKNKLEEKGIT 789
EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP+HLHERLSLIR+AK +LEEKGIT
Sbjct: 354 EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLEEKGIT 413
Query: 788 PSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSYIADNRLDNNPW 609
PSIDRIAE LNMS KK++NATEA+ V SLDREAFPSLNGLPGET HSYIAD RL+NNPW
Sbjct: 414 PSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVRLENNPW 473
Query: 608 HGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIGLSRERVRQVGI 429
HGVDEWALK+EV+ LI+T+L ERERDIIRLYYGLD+E LTWE+ISKRIGLSRERVRQVG+
Sbjct: 474 HGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGL 533
Query: 428 VALEKLKHAARKRRMEALLVKH 363
VALEKLK+AARK RMEA+LVK+
Sbjct: 534 VALEKLKNAARKGRMEAMLVKY 555
>ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-like [Fragaria vesca
subsp. vesca]
Length = 511
Score = 624 bits (1608), Expect = e-176
Identities = 334/514 (64%), Positives = 406/514 (78%), Gaps = 15/514 (2%)
Frame = -1
Query: 1859 MATAA-VVGLSA-GKRLLSSSFYYSDLTEKLSYASEQH----QIVPAKNIIVAKKTASFH 1698
MATAA VVGLS+ GKRLLSSS YSD+T+KL Y ++ Q+ KN++ A+K++S +
Sbjct: 1 MATAAAVVGLSSTGKRLLSSSLSYSDITDKLFYLNDHGFVNCQLSSTKNVVTARKSSSKY 60
Query: 1697 NRG---------SSSIKALKECIDGATTVPPTSEPWVPRSSPIEGENLDPETTLEALLLL 1545
+ SI+AL+E D A+ T+ + + +E E+ D E ++EALLLL
Sbjct: 61 SNSRFPSSNRHHEQSIRALQEHADTASAPSSTTHQLLEEYTDLEEESSDLEYSVEALLLL 120
Query: 1544 QKSMLEKQLELSFERSSSTDIIRENNPKESHVTSSGIPARARRINARKRSQGKTFPTKDS 1365
QKS+LEKQ LSFE+ ST I +N + VT SG+ AR RR++ ++++ K
Sbjct: 121 QKSLLEKQWNLSFEKKLSTRKITDN---KIPVTCSGVSARQRRMSTKRKAFSKNTSELQP 177
Query: 1364 QRNKPLVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDK 1185
NK AT+SP LLQNR GYV+GVT D LLTH +VV LS+KI+ GLS+EEHK+RLK+K
Sbjct: 178 STNKYCRATISPSLLQNRTSGYVKGVTSDHLLTHTEVVRLSKKIKIGLSVEEHKSRLKEK 237
Query: 1184 LGCEPSDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADL 1005
LGCEPS EQLA S+R+ R E+++KLI+CSLAREKL MSNVRLVMSIAQRY+NMGA+MADL
Sbjct: 238 LGCEPSVEQLATSLRISRTELQSKLIQCSLAREKLTMSNVRLVMSIAQRYDNMGAEMADL 297
Query: 1004 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIR 825
+QGGLIGLLRGIEKFD+SKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL LIR
Sbjct: 298 IQGGLIGLLRGIEKFDASKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR 357
Query: 824 SAKNKLEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHS 645
+AK +LEEKGITPSID IAESLNMS KK++NATEA+ V SLDR+AFPSLNGLPGET+HS
Sbjct: 358 NAKVRLEEKGITPSIDSIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHS 417
Query: 644 YIADNRLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRI 465
YIADNR +N PWHG+DE ALK+EV+ LI+ L ERER+IIRLYYGLD+E LTWE+ISKRI
Sbjct: 418 YIADNRHENIPWHGLDELALKDEVNKLINLMLGEREREIIRLYYGLDNECLTWEDISKRI 477
Query: 464 GLSRERVRQVGIVALEKLKHAARKRRMEALLVKH 363
GLSRERVRQVG+VALEKLKH ARK+ +EA+LV+H
Sbjct: 478 GLSRERVRQVGLVALEKLKHGARKKELEAMLVQH 511
>ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X3 [Cicer
arietinum]
Length = 513
Score = 623 bits (1606), Expect = e-175
Identities = 329/520 (63%), Positives = 414/520 (79%), Gaps = 21/520 (4%)
Frame = -1
Query: 1859 MATAAVVGLSAGKRLLSSSFYYSDLTEKL----SYASEQHQIVPAKNIIVAKKTASF--- 1701
MATAAV+GLS GKRLLSSS++YSD+ EK + S Q+ + P+K++I++KK++
Sbjct: 1 MATAAVIGLSGGKRLLSSSYHYSDVIEKFYHGCDFGSSQYHLPPSKSVILSKKSSKCAPT 60
Query: 1700 ---HNRGSSSIKALKE---CIDGATTVPPTSEPWVPRSSPIEGE-NLDPETT------LE 1560
++R + SIKALKE +D A + SEPW + L+ ET+ ++
Sbjct: 61 FPAYDRQNHSIKALKEHAVVVDDAPAIA-NSEPWFQGGCNSNSDLELELETSDINCYSVD 119
Query: 1559 ALLLLQKSMLEKQLELSFERSSSTD-IIRENNPKESHVTSSGIPARARRINARKRSQGKT 1383
ALLL+QKSMLEKQ LSFER T+ +R N ++ VT SG+ AR RR+N++++ KT
Sbjct: 120 ALLLMQKSMLEKQWCLSFEREVVTENSMRVKNRRKVTVTCSGVSARQRRMNSKRKISSKT 179
Query: 1382 FPTKDSQRNKPLVATVSPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHK 1203
+ + ++PELLQNR+ GYV+GV +ELL+HAQVV LS+KI+AGLSL+EHK
Sbjct: 180 GSAVQMR------SAITPELLQNRLKGYVKGVVSEELLSHAQVVKLSQKIKAGLSLDEHK 233
Query: 1202 ARLKDKLGCEPSDEQLAASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMG 1023
+RLK++LGCEPSD+Q+A S+++ +AE+R K+IECSLAREKL MSNVRLVMSIAQRY+NMG
Sbjct: 234 SRLKERLGCEPSDDQVATSLKISQAELRAKIIECSLAREKLTMSNVRLVMSIAQRYDNMG 293
Query: 1022 ADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHE 843
A+MADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRTLRLPTHLHE
Sbjct: 294 AEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPTHLHE 353
Query: 842 RLSLIRSAKNKLEEKGITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLP 663
RLSLIR+A+ +LEE+GITP+IDRIA+ LNMS KK++NATEA+ V S+DREAFPSLNGLP
Sbjct: 354 RLSLIRNAEYRLEERGITPTIDRIAKCLNMSQKKVRNATEAINKVFSIDREAFPSLNGLP 413
Query: 662 GETYHSYIADNRLDNNPWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWE 483
G+T+H++IAD R +N PW+GVDEWALK EV+ LI+ +L ERER+I+RLYYGLD E LTWE
Sbjct: 414 GDTHHNFIADKRHENIPWNGVDEWALKEEVNRLINVTLVEREREIVRLYYGLDKECLTWE 473
Query: 482 EISKRIGLSRERVRQVGIVALEKLKHAARKRRMEALLVKH 363
+ISKRIGLSRERVRQVG+VALEKLKH ARKR MEA+L+KH
Sbjct: 474 DISKRIGLSRERVRQVGLVALEKLKHEARKREMEAMLLKH 513
>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
Length = 502
Score = 623 bits (1606), Expect = e-175
Identities = 328/504 (65%), Positives = 395/504 (78%), Gaps = 9/504 (1%)
Frame = -1
Query: 1847 AVVGLSAGKRLLSSSFYYSDLTEKL---SYASEQHQIVPAKNIIVAKKTASFH-----NR 1692
A++GLSAG R+LSSSFYYS LTEK +A H KN+I AK ++++ NR
Sbjct: 3 AIIGLSAGNRILSSSFYYSVLTEKFCVSDHALPCHHFPSPKNVINAKNSSNYSPSYVSNR 62
Query: 1691 GSSSIKALKECIDGATTVPPTSEPWVPRSSPIEGENLDPETTLEALLLLQKSMLEKQLEL 1512
S+KALKE +D A+ +EPWV ++ + E ++E LLLLQKSMLEKQ L
Sbjct: 63 KKQSVKALKEHVDIASNRDSDTEPWVQMFKQLQNGSCSEEDSVEVLLLLQKSMLEKQWNL 122
Query: 1511 SFERSSSTDIIRENNPKESHVTSSGIPARARRINARKRSQ-GKTFPTKDSQRNKPLVATV 1335
S E++ + + N K+ +T SG AR RR++ RKR K T DS +K L + +
Sbjct: 123 SAEKAMTNE---NNCKKKMQITCSGTSARRRRMDTRKRDLLPKNSATSDSS-SKRLRSVI 178
Query: 1334 SPELLQNRMMGYVRGVTCDELLTHAQVVSLSRKIEAGLSLEEHKARLKDKLGCEPSDEQL 1155
PELLQNR GY+ GV ELLTH +VV LS+KI+ GL LEE K+RLK++LGCEPSD+QL
Sbjct: 179 GPELLQNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGCEPSDDQL 238
Query: 1154 AASVRMDRAEVRTKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGLLR 975
A S+++ RA++R+ LIECSLAREKLAMSNVRLVMSIAQRY+ G +MADL+QGGLIGLLR
Sbjct: 239 AISLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDTNGTEMADLIQGGLIGLLR 298
Query: 974 GIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKNKLEEKG 795
GIEKFD S+GFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLSLIR+AK KL+E G
Sbjct: 299 GIEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENG 358
Query: 794 ITPSIDRIAESLNMSHKKIKNATEAVRSVLSLDREAFPSLNGLPGETYHSYIADNRLDNN 615
ITPSI++IAE LNMS KK++NATEA V SLDREAFPSLNGLPGET HSYIADNRL+N
Sbjct: 359 ITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRLENI 418
Query: 614 PWHGVDEWALKNEVSNLIDTSLRERERDIIRLYYGLDDESLTWEEISKRIGLSRERVRQV 435
PWHGVDEW LK+EV+NLI ++LRERER+I+RLYYGLD+E LTWE+IS+RIGLSRERVRQV
Sbjct: 419 PWHGVDEWMLKDEVNNLISSTLREREREIVRLYYGLDNECLTWEDISRRIGLSRERVRQV 478
Query: 434 GIVALEKLKHAARKRRMEALLVKH 363
G+VALEKLKHAARKRR++A+LVKH
Sbjct: 479 GLVALEKLKHAARKRRLDAMLVKH 502