BLASTX nr result
ID: Achyranthes22_contig00001118
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00001118
(1584 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 520 e-145
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [... 513 e-142
gb|EMJ01009.1| hypothetical protein PRUPE_ppa004969mg [Prunus pe... 512 e-142
gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theob... 506 e-141
gb|EMJ01008.1| hypothetical protein PRUPE_ppa004969mg [Prunus pe... 506 e-140
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis] 498 e-138
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr... 494 e-137
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu... 488 e-135
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 483 e-133
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit... 469 e-129
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 469 e-129
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 469 e-129
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 467 e-129
ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A... 466 e-128
ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Caps... 452 e-124
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian... 451 e-124
gb|ESW29223.1| hypothetical protein PHAVU_002G053600g [Phaseolus... 449 e-123
gb|EEE69173.1| hypothetical protein OsJ_28343 [Oryza sativa Japo... 449 e-123
gb|EEC84066.1| hypothetical protein OsI_30347 [Oryza sativa Indi... 449 e-123
ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutr... 445 e-122
>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis vinifera]
gi|296090438|emb|CBI40257.3| unnamed protein product
[Vitis vinifera]
Length = 476
Score = 520 bits (1340), Expect = e-145
Identities = 279/476 (58%), Positives = 333/476 (69%), Gaps = 20/476 (4%)
Frame = -1
Query: 1476 RQFLRSPATITAVTETLF-------KQQCYRLSSTAVKEETNPLTEKKHSGGEKGNGKWV 1318
R FL+S T +F ++ C+ S+ AV E + GKW
Sbjct: 9 RFFLQSRRETTGKVGDMFCISALDQQRSCFATSNDAVSE-----------AHKSKKGKWF 57
Query: 1317 TLPPFSPTIDGVSLGK-----RISKRGGNDTIETTTSALKWVLRCCPHIPRSLVQKLFRL 1153
TLP F+P +D SLGK R GN T +T+ALKWV+RCCP +PRSLVQKLFRL
Sbjct: 58 TLPAFTPVVDASSLGKVLSGHRTDLNTGNTTAGASTTALKWVVRCCPQLPRSLVQKLFRL 117
Query: 1152 RQVRRECVGGEV-DGGTNAQESRLKRVGAKDVMNEGERIFLPISVQGSPVKKPENKCSEE 976
RQVRRE D G QE RLKRV AKD+MN G++I LPI+V+ P +K E C++E
Sbjct: 118 RQVRRESYNMITSDIGVQNQEHRLKRVAAKDLMNLGDQILLPITVEEFPSEKHEYHCNDE 177
Query: 975 EMNFILGLELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRYNFEDAPRLVHRLD 796
E+NF+ LELYKD AII +NKPP LPVQGG+GIK+SLD LAA+ LRY+ + PRLVHRLD
Sbjct: 178 EINFVHNLELYKDPAIIVVNKPPGLPVQGGIGIKRSLDELAATYLRYDCSEPPRLVHRLD 237
Query: 795 RDSSGILVMGRTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQKRYLALVFGVPRQSKG 616
RDSSGIL+MGRTQTS ILHSIFREKT G + +ID KR LQ+RY ALV G PR+ +G
Sbjct: 238 RDSSGILIMGRTQTSATILHSIFREKTFG-ASNNDIDTKKRILQRRYWALVIGSPRRPRG 296
Query: 615 LISVPLTKVVLDDGKSERITIAG--RASSSQHAMTEYRVIETSAYGYTWLELSPITGRKH 442
LIS PL KVV+DDGKSERITI + SSQHA+TEYRVI++S +GYTWLELSP+TGRKH
Sbjct: 297 LISAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGRKH 356
Query: 441 QLRVHCAEVLGTPIVGDYKYGWQAHRRWEPL-----PPYPNEELVEEKLLPLGLNSECGS 277
QLRVHCAEVLGTPIVGDYKYGWQAHR+W+ L +E L K P GL+ E GS
Sbjct: 357 QLRVHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGS 416
Query: 276 ISEKQPHLHLHCKQMILPNISLALEHASSDLNYDFSKLESINLVAPLPLHMQRSWN 109
I +KQPHLHLHCKQM+LPN+SLAL++ D S+LES+ VAPLP HMQRSW+
Sbjct: 417 ILDKQPHLHLHCKQMVLPNVSLALQNLQLSAECDLSELESLEFVAPLPSHMQRSWD 472
>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 536
Score = 513 bits (1320), Expect = e-142
Identities = 269/474 (56%), Positives = 339/474 (71%), Gaps = 9/474 (1%)
Frame = -1
Query: 1503 KEMFQPSYLRQFLRSPATITAVTETLFKQQCYRLSS-TAVKEETNPLTEKKHSGGEKGNG 1327
K+M + ++ R+ L + + +F+ + ++ T K T T K ++ K G
Sbjct: 70 KKMPEVTFPRRVLLFQSLLCISNRCIFQSHYFTTTTITQTKSSTKDQTSKNNT---KNTG 126
Query: 1326 KWVTLPPFSPTIDGVSLGKRISKRGGNDTIETTTSALKWVLRCCPHIPRSLVQKLFRLRQ 1147
K+ TLPP++ TI G +LGK +S T T+ALKWVLRCCP +PR+LVQKLFRLRQ
Sbjct: 127 KFFTLPPYTSTISGSALGKALSATA-TAKASTETTALKWVLRCCPELPRNLVQKLFRLRQ 185
Query: 1146 VRRECVGGEVDGGTNAQESRLKRVGAKDVMNEGERIFLPISVQGSPVKKPENKCSEEEMN 967
V+RE + + G E + KRV AKD+MN G+RIFLPISVQ P +K + C E+E N
Sbjct: 186 VKRELL----NVGDGEMEHKTKRVAAKDLMNVGDRIFLPISVQALPFEKQKCHCGEKEAN 241
Query: 966 FILGLELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRYNFEDAPRLVHRLDRDS 787
FI GLELYKD AII +NKPP +PVQGG+GIK S D LAASCL Y++ + PRLVHRLDRDS
Sbjct: 242 FIRGLELYKDEAIIVVNKPPGMPVQGGIGIKSSFDELAASCLSYDYSEPPRLVHRLDRDS 301
Query: 786 SGILVMGRTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQKRYLALVFGVPRQSKGLIS 607
SGILVMGRTQTST +LHS+FREKT + +I +R LQ++Y ALV G PR+ KG+IS
Sbjct: 302 SGILVMGRTQTSTMVLHSVFREKTFA-ASNHDIGERRRILQRKYWALVIGSPRRQKGIIS 360
Query: 606 VPLTKVVLDDGKSERITIAGRASSS--QHAMTEYRVIETSAYGYTWLELSPITGRKHQLR 433
PL KVV+DDGKS+RIT+ A S+ QHA+T+YRV+E S++GY WLELSPITGRKHQLR
Sbjct: 361 APLGKVVVDDGKSDRITVVENAESTSFQHAVTQYRVME-SSHGYAWLELSPITGRKHQLR 419
Query: 432 VHCAEVLGTPIVGDYKYGWQAHRRWEPLPPYPNEELVE------EKLLPLGLNSECGSIS 271
VHCAEVLGTPIVGDYKYGWQ HR+W+ L P+PN E + +K+LP G++ E GSIS
Sbjct: 420 VHCAEVLGTPIVGDYKYGWQVHRKWKQL-PFPNLEKISNENALCKKILPFGIDLESGSIS 478
Query: 270 EKQPHLHLHCKQMILPNISLALEHASSDLNYDFSKLESINLVAPLPLHMQRSWN 109
EK P LHLHCKQM+LP++S AL + NYDFS L+SI L APLP +MQRSW+
Sbjct: 479 EKHPRLHLHCKQMVLPDVSQALRGVQTSSNYDFSDLKSIELDAPLPSYMQRSWD 532
>gb|EMJ01009.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
Length = 483
Score = 512 bits (1318), Expect = e-142
Identities = 276/445 (62%), Positives = 319/445 (71%), Gaps = 26/445 (5%)
Frame = -1
Query: 1365 TEKKHSGGEKGNGKWVTLPPFSPTIDGVSLGKRISKRG--GNDTI---------ETTTSA 1219
TE H EK KW TLPPF+ TI+G +LGK +S+ G D I TTT+A
Sbjct: 36 TETFHEDREKRGEKWFTLPPFTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTA 95
Query: 1218 LKWVLRCCPHIPRSLVQKLFRLRQVRRECVGGEVDG-GTNAQESRLKRVGAKDVMNEGER 1042
LKWV RCCP +PRSLVQKLFRLRQVRRE E G G A E LKRV AKD MN G+R
Sbjct: 96 LKWVTRCCPELPRSLVQKLFRLRQVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDR 155
Query: 1041 IFLPISVQGSPVKK---PENK----CSEEEMNFILGLELYKDSAIIAINKPPKLPVQGGL 883
I LP+SVQ P K P +K CSEEE+ FI LELYKD AII INKPP +PVQGG+
Sbjct: 156 IHLPLSVQEFPNDKQELPNDKKECYCSEEEVTFIRSLELYKDPAIIVINKPPGMPVQGGI 215
Query: 882 GIKKSLDVLAASCLRYNFEDAPRLVHRLDRDSSGILVMGRTQTSTAILHSIFREKTIGMM 703
GIK+SLD LAA+CL Y+F + PRLVHRLDRDSSGILVMGRTQTS +LHSIFREKT G
Sbjct: 216 GIKRSLDELAAACLSYDFSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGAS 275
Query: 702 EDKEIDWGKRYLQKRYLALVFGVPRQSKGLISVPLTKVVLDDGKSERITIAGRASS--SQ 529
D EID KR LQ+RY ALV G PRQ KGLIS PL KVV+D+GKS+RITI + + SQ
Sbjct: 276 ND-EIDDAKRILQRRYWALVIGSPRQRKGLISAPLGKVVVDNGKSDRITIVNDSQTLPSQ 334
Query: 528 HAMTEYRVIETSAYGYTWLELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPL 349
HA+T+Y+VI + GYTWLEL+P+TGRKHQLRVHCAEVL TPIVGDYKYGWQ HR W+PL
Sbjct: 335 HAITKYKVIGSPCPGYTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQTHRNWKPL 394
Query: 348 -----PPYPNEELVEEKLLPLGLNSECGSISEKQPHLHLHCKQMILPNISLALEHASSDL 184
+ +EE + K LP LN E GS+SEK P LHLHCKQM+LPN++LAL++
Sbjct: 395 AWSNNECHSDEEFPKRKNLPFDLNMESGSVSEKNPRLHLHCKQMVLPNVNLALQNVKLHS 454
Query: 183 NYDFSKLESINLVAPLPLHMQRSWN 109
+ D S+LES+ LVA LP MQRSWN
Sbjct: 455 DSDLSELESLELVAALPSFMQRSWN 479
>gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
Length = 477
Score = 506 bits (1304), Expect = e-141
Identities = 272/473 (57%), Positives = 343/473 (72%), Gaps = 13/473 (2%)
Frame = -1
Query: 1488 PSYLRQFLRS---PATI--TAVTETLFKQQCYRLSSTAVKEETNPLTEKKHSGGEKGNGK 1324
P+ LR+ LRS PAT + + F Q Y S+T + L + +S +K N K
Sbjct: 5 PNLLRRLLRSSRPPATHGGNGLIVSAFHQLRYHYSTTN-ELSAEHLKDDGNSEKKKKN-K 62
Query: 1323 WVTLPPFSPTIDGVSLGKRISKRGGNDTIETTTSALKWVLRCCPHIPRSLVQKLFRLRQV 1144
W TLPPF+ T++ LG ++S + + TT A+KWV+RCCP +PRSLVQKLFRLRQV
Sbjct: 63 WFTLPPFTKTVNASVLGAKLSGKPHSKAANETT-AVKWVMRCCPELPRSLVQKLFRLRQV 121
Query: 1143 RRECVGGEVDG-GTNAQESRLKRVGAKDVMNEGERIFLPISVQGSPVKKPENKCSEEEMN 967
RRE EV G G Q +LKRVGAKD +N G+RIFLP SV+ +K E+ C+EEE+N
Sbjct: 122 RRESHVLEVAGDGCQVQTVQLKRVGAKDALNIGDRIFLPFSVREFREEKQESGCTEEELN 181
Query: 966 FILGLELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRYNFEDAPRLVHRLDRDS 787
FI GLELYKD AII +NKPP +PVQGG+GIK SLD LAA+CL +++ + PRLVHRLDRDS
Sbjct: 182 FIRGLELYKDPAIIVLNKPPGMPVQGGIGIKWSLDKLAAACLCFDYSEPPRLVHRLDRDS 241
Query: 786 SGILVMGRTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQKRYLALVFGVPRQSKGLIS 607
SGILVMGRTQ S ILHS+FRE+T +D ++D KR LQKRY ALV G PR+ KG+I
Sbjct: 242 SGILVMGRTQMSATILHSVFREETNDASKD-DVDNEKRILQKRYWALVIGSPRRPKGMIV 300
Query: 606 VPLTKVVLDDGKSERITIAGRAS--SSQHAMTEYRVIETSAYGYTWLELSPITGRKHQLR 433
PL KVV+DDGKS+RIT+ + SSQ A TEY+VI+T+++GYTWLELSP+TGRKHQLR
Sbjct: 301 APLRKVVVDDGKSDRITVFDNSQIVSSQRAKTEYQVIKTTSHGYTWLELSPLTGRKHQLR 360
Query: 432 VHCAEVLGTPIVGDYKYGWQAHRRWEPLP-----PYPNEELVEEKLLPLGLNSECGSISE 268
VHCAEVLGTPIVGDYKYGWQAHRRW+ LP N++ EE +LP GLN + GSIS
Sbjct: 361 VHCAEVLGTPIVGDYKYGWQAHRRWQHLPESDLKKSSNDKCPEENMLPFGLNMDSGSISA 420
Query: 267 KQPHLHLHCKQMILPNISLALEHASSDLNYDFSKLESINLVAPLPLHMQRSWN 109
K+P LHLHC++MI PN+S AL++ ++D SKL+S+ +VAPLP +MQ+SW+
Sbjct: 421 KRPRLHLHCREMIFPNVSQALQNLQLSTDHDLSKLKSLEVVAPLPSYMQKSWD 473
>gb|EMJ01008.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
Length = 481
Score = 506 bits (1302), Expect = e-140
Identities = 275/445 (61%), Positives = 318/445 (71%), Gaps = 26/445 (5%)
Frame = -1
Query: 1365 TEKKHSGGEKGNGKWVTLPPFSPTIDGVSLGKRISKRG--GNDTI---------ETTTSA 1219
TE H EK KW TLPPF+ TI+G +LGK +S+ G D I TTT+A
Sbjct: 36 TETFHEDREKRGEKWFTLPPFTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTA 95
Query: 1218 LKWVLRCCPHIPRSLVQKLFRLRQVRRECVGGEVDG-GTNAQESRLKRVGAKDVMNEGER 1042
LKWV RCCP +PRSLVQKLFRLRQVRRE E G G A E LKRV AKD MN G+R
Sbjct: 96 LKWVTRCCPELPRSLVQKLFRLRQVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDR 155
Query: 1041 IFLPISVQGSPVKK---PENK----CSEEEMNFILGLELYKDSAIIAINKPPKLPVQGGL 883
I LP+SVQ P K P +K CSEEE+ FI LELYKD AII INKPP +PVQGG+
Sbjct: 156 IHLPLSVQEFPNDKQELPNDKKECYCSEEEVTFIRSLELYKDPAIIVINKPPGMPVQGGI 215
Query: 882 GIKKSLDVLAASCLRYNFEDAPRLVHRLDRDSSGILVMGRTQTSTAILHSIFREKTIGMM 703
GIK+SLD LAA+CL Y+F + PRLVHRLDRDSSGILVMGRTQTS +LHSIFREKT G
Sbjct: 216 GIKRSLDELAAACLSYDFSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGAS 275
Query: 702 EDKEIDWGKRYLQKRYLALVFGVPRQSKGLISVPLTKVVLDDGKSERITIAGRASS--SQ 529
D EID KR LQ+RY ALV G PRQ KGLIS PL KVV+D+GKS+RITI + + SQ
Sbjct: 276 ND-EIDDAKRILQRRYWALVIGSPRQRKGLISAPLGKVVVDNGKSDRITIVNDSQTLPSQ 334
Query: 528 HAMTEYRVIETSAYGYTWLELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPL 349
HA+T+Y+VI + YTWLEL+P+TGRKHQLRVHCAEVL TPIVGDYKYGWQ HR W+PL
Sbjct: 335 HAITKYKVIGSPC--YTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQTHRNWKPL 392
Query: 348 -----PPYPNEELVEEKLLPLGLNSECGSISEKQPHLHLHCKQMILPNISLALEHASSDL 184
+ +EE + K LP LN E GS+SEK P LHLHCKQM+LPN++LAL++
Sbjct: 393 AWSNNECHSDEEFPKRKNLPFDLNMESGSVSEKNPRLHLHCKQMVLPNVNLALQNVKLHS 452
Query: 183 NYDFSKLESINLVAPLPLHMQRSWN 109
+ D S+LES+ LVA LP MQRSWN
Sbjct: 453 DSDLSELESLELVAALPSFMQRSWN 477
>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
Length = 470
Score = 498 bits (1283), Expect = e-138
Identities = 257/428 (60%), Positives = 312/428 (72%), Gaps = 14/428 (3%)
Frame = -1
Query: 1350 SGGEKGNGKWVTLPPFSPTIDGVSLGKRISKRGGND------TIETTTSALKWVLRCCPH 1189
+ EK KW TLPP + T+DG LGK I+ +D + T+ALKWV+RCCP
Sbjct: 40 ASSEKNGTKWFTLPPHTATVDGAVLGKAIAGAKDDDVKVLQASKSAATTALKWVVRCCPE 99
Query: 1188 IPRSLVQKLFRLRQVRRECVGGE-VDGGTNAQESRLKRVGAKDVMNEGERIFLPISVQGS 1012
+PRSLVQKLFRLRQVRRE E + G + RL+RV AKD +N G++IFLPISV+
Sbjct: 100 LPRSLVQKLFRLRQVRRESFNVEDCNAGDQLGKPRLRRVSAKDSLNLGDKIFLPISVKEL 159
Query: 1011 PVKKPENKCSEEEMNFILGLELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRYN 832
PV+K E C+EEE+ FI LELYKD AI+ +NKPP LPVQGG+GIK SLD LA +CL Y+
Sbjct: 160 PVEKKECFCNEEEVKFIRSLELYKDPAIVVVNKPPGLPVQGGIGIKTSLDQLAVTCLSYD 219
Query: 831 FEDAPRLVHRLDRDSSGILVMGRTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQKRYL 652
+ + PRLVHRLDRD SGILVMGRTQTS +LHSIFREKT G D+ + GK LQ+RY
Sbjct: 220 YTEPPRLVHRLDRDCSGILVMGRTQTSATVLHSIFREKTFGASNDETVK-GKIVLQRRYW 278
Query: 651 ALVFGVPRQSKGLISVPLTKVVLDDGKSERITI--AGRASSSQHAMTEYRVIETSAYGYT 478
A V G PR GLIS PL KVVLD+GKS+RIT+ SSQHA+T+Y+VI +S++GYT
Sbjct: 279 AFVIGSPRHPNGLISAPLRKVVLDNGKSDRITVVNGSHTLSSQHAITKYKVIGSSSHGYT 338
Query: 477 WLELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPLP-PYPNEELVE----EK 313
WLELSP+TGRKHQLRVHCAEVLGTP+VGDYKYGWQAHR W+PL P P+ + +E K
Sbjct: 339 WLELSPLTGRKHQLRVHCAEVLGTPMVGDYKYGWQAHRDWKPLHWPDPDNKCIEVLPKRK 398
Query: 312 LLPLGLNSECGSISEKQPHLHLHCKQMILPNISLALEHASSDLNYDFSKLESINLVAPLP 133
LP GLN + GSISEK P LHLHCKQM+LPNIS L++ +Y+ S+LE + L APLP
Sbjct: 399 NLPFGLNMDNGSISEKHPRLHLHCKQMVLPNISHVLQNVQRYSDYELSRLERLKLDAPLP 458
Query: 132 LHMQRSWN 109
+MQRSW+
Sbjct: 459 SYMQRSWH 466
>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
gi|557524859|gb|ESR36165.1| hypothetical protein
CICLE_v10028283mg [Citrus clementina]
Length = 494
Score = 494 bits (1272), Expect = e-137
Identities = 258/448 (57%), Positives = 323/448 (72%), Gaps = 11/448 (2%)
Frame = -1
Query: 1419 QQCYRLSSTAVKEETNPLT-EKKHSGGEKGNGKWVTLPPFSPTIDGVSLGKRISKRGGND 1243
Q CY + +T+ + ++G ++ GKW TLPPF+ TIDG +LG++++ +
Sbjct: 48 QSCYATKTLTRNNKTHINNCDDNNNGDDERRGKWFTLPPFTSTIDGSALGRQLACPSKSP 107
Query: 1242 TIETTTSALKWVLRCCPHIPRSLVQKLFRLRQVRRECVGGEVDGGTNA---QESRLKRVG 1072
ETT ALKWVL+CCP +PR+ VQKLFRL QVRRE +D N QE +LKRV
Sbjct: 108 ISETT--ALKWVLQCCPGLPRNFVQKLFRLSQVRRE--SPSLDSSANEGHEQEIKLKRVA 163
Query: 1071 AKDVMNEGERIFLPISVQGSPVKKPENKCSEEEMNFILGLELYKDSAIIAINKPPKLPVQ 892
AKD + G+RIFLPIS+Q SP +K + C+EEE+ FI LELYKDSAII INKP +PVQ
Sbjct: 164 AKDSLKLGDRIFLPISIQESPSRKEKCPCTEEEVGFIQSLELYKDSAIIVINKPHGMPVQ 223
Query: 891 GGLGIKKSLDVLAASCLRYNFEDAPRLVHRLDRDSSGILVMGRTQTSTAILHSIFREKTI 712
GG+GI++S+D LAA+CL Y++ + PRLVHRLDRDSSGILVMGRTQTS +LHSIFREKT
Sbjct: 224 GGIGIRRSIDELAATCLTYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTF 283
Query: 711 GMMEDKEIDWGKRYLQKRYLALVFGVPRQSKGLISVPLTKVVLDDGKSERITIAG--RAS 538
++ + D KR LQ+ Y ALV G PR SKG+IS PL KVV+D+GKS+RIT+ +
Sbjct: 284 SASKE-DNDNEKRILQRWYWALVVGTPRCSKGVISAPLRKVVVDNGKSDRITVVNNDQIM 342
Query: 537 SSQHAMTEYRVIETSAYGYTWLELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRW 358
S+QHA+T Y+VI+ S +GYTWL+LSP+TGRKHQLRVHCAEVLGTPIVGDYKYGWQ HR+W
Sbjct: 343 SAQHAVTRYQVIKPSCHGYTWLKLSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHRKW 402
Query: 357 EPLPPY-----PNEELVEEKLLPLGLNSECGSISEKQPHLHLHCKQMILPNISLALEHAS 193
+ P N+E +EK L GL+ E GSI EKQP LHLHCK+M LPN+S A++
Sbjct: 403 KQFHPSDLNKDSNDETPKEKTLHFGLDLESGSILEKQPGLHLHCKEMTLPNVSQAIQKVQ 462
Query: 192 SDLNYDFSKLESINLVAPLPLHMQRSWN 109
D SKLES+ LVAPLP HMQRSW+
Sbjct: 463 LSSGCDVSKLESLKLVAPLPSHMQRSWD 490
>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
gi|550331407|gb|EEE87831.2| hypothetical protein
POPTR_0009s09860g [Populus trichocarpa]
Length = 471
Score = 488 bits (1257), Expect = e-135
Identities = 253/431 (58%), Positives = 320/431 (74%), Gaps = 8/431 (1%)
Frame = -1
Query: 1377 TNPLTEKKHSGGEKGNGKWVTLPPFSPTIDGVSLGKRISKRGGNDTIETTTSALKWVLRC 1198
TN ++ + ++G KW TLPP++ TI+G LG +S R + TT ALKWVLRC
Sbjct: 42 TNTKSQNHYENDKRG--KWFTLPPYTSTINGSVLGIALSARIPAKSASETT-ALKWVLRC 98
Query: 1197 CPHIPRSLVQKLFRLRQVRREC-VGGEVDGGTNAQESRLKRVGAKDVMNEGERIFLPISV 1021
CP +PR+LVQKLFRLRQVRRE V + G QE RLKRV AKD M+ G+RIFLPISV
Sbjct: 99 CPELPRNLVQKLFRLRQVRRESPVMESCNLGDQGQEHRLKRVAAKDSMDVGDRIFLPISV 158
Query: 1020 QGSPVKKPENKCSEEEMNFILGLELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCL 841
+ P +K + C+EEE+NFI GLELYKD+AII +NKPP +PVQGG+GIK+SLD L+ASC
Sbjct: 159 KVLPAEKQDCHCNEEEINFIRGLELYKDAAIIVVNKPPGMPVQGGIGIKRSLDELSASCF 218
Query: 840 RYNFEDAPRLVHRLDRDSSGILVMGRTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQK 661
++ + PRLVHRLDRD SGILVMGRTQTS +LH+IFREKT+ D ++ +R LQ+
Sbjct: 219 SSDYSEPPRLVHRLDRDCSGILVMGRTQTSATVLHAIFREKTLAASND-DVGNKRRILQR 277
Query: 660 RYLALVFGVPRQSKGLISVPLTKVVLDDGKSERITIAGRAS--SSQHAMTEYRVIETSAY 487
+Y ALV G PR+ KGLIS PL KVV+D+GKS+RIT+ + SSQHA+T+YRVIE S++
Sbjct: 278 KYWALVIGSPRRPKGLISAPLGKVVVDNGKSDRITVVENSQNLSSQHAVTQYRVIE-SSH 336
Query: 486 GYTWLELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPL-----PPYPNEELV 322
G+TWLELSP+TGRKHQLRVHCAEVLGTPIVGDYKY WQAHR W+ L N++ +
Sbjct: 337 GFTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYAWQAHRNWKQLQWSNIEDNSNDKSL 396
Query: 321 EEKLLPLGLNSECGSISEKQPHLHLHCKQMILPNISLALEHASSDLNYDFSKLESINLVA 142
EK+LP L+ + GSISEK P LHLHCKQM+LP++S AL+ +YDFS+L S+ A
Sbjct: 397 SEKILPFALDLDSGSISEKHPRLHLHCKQMVLPDVSKALQDVQLSSDYDFSQLASLKFDA 456
Query: 141 PLPLHMQRSWN 109
PLP +M++SW+
Sbjct: 457 PLPPYMKKSWD 467
>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
vesca subsp. vesca]
Length = 476
Score = 483 bits (1243), Expect = e-133
Identities = 256/432 (59%), Positives = 307/432 (71%), Gaps = 13/432 (3%)
Frame = -1
Query: 1365 TEKKHSGGEKGNGKWVTLPPFSPTIDGVSLGKRISKRGGND-----TIETTTSALKWVLR 1201
T+ H +K KW TLPPF+ T++G +LG+ +S+ G D + T+ALKWV R
Sbjct: 38 TQTVHEDKQKRGNKWFTLPPFTDTVNGAALGRELSRSVGRDVYAKPSAAAATTALKWVTR 97
Query: 1200 CCPHIPRSLVQKLFRLRQVRRECVGGEVDGGTNAQESRLKRVGAKDVMNEGERIFLPISV 1021
CCP IPR+LVQKLFRLRQVRRE ++D LKRVG KD MN G+RI LPISV
Sbjct: 98 CCPEIPRNLVQKLFRLRQVRREA--SDMDQSVQP----LKRVGTKDSMNLGDRICLPISV 151
Query: 1020 QGSPV-KKPENKCSEEEMNFILGLELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASC 844
+ P K+ E CSEEE FI L LYKD AII INKPP LPVQGG+GIK+SLD LAA+C
Sbjct: 152 KEFPDHKQKEGHCSEEEAEFIRSLVLYKDPAIIVINKPPGLPVQGGIGIKRSLDELAATC 211
Query: 843 LRYNFEDAPRLVHRLDRDSSGILVMGRTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQ 664
L Y+ PRLVHRLDRD SGILVMGRTQTS +LHS+FREKT G +D I K LQ
Sbjct: 212 LSYDLSQPPRLVHRLDRDCSGILVMGRTQTSATVLHSVFREKTFGASDD-VIKHAKSILQ 270
Query: 663 KRYLALVFGVPRQSKGLISVPLTKVVLDDGKSERITIAGRAS--SSQHAMTEYRVIETSA 490
+RYLALV G PRQ +GLISVPL KVV+D+GKS+RITI +A SQHA+T+Y+VI +S
Sbjct: 271 RRYLALVIGSPRQQEGLISVPLGKVVVDNGKSDRITILNKAQCLPSQHAITKYKVIGSSC 330
Query: 489 YGYTWLELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPL-----PPYPNEEL 325
G+TWLEL P+TGRKHQLRVHCAEVLGTPIVGDYKYGW+ H+ W+P+ + NEE
Sbjct: 331 PGFTWLELIPLTGRKHQLRVHCAEVLGTPIVGDYKYGWRTHKDWKPVAWSKTECHSNEER 390
Query: 324 VEEKLLPLGLNSECGSISEKQPHLHLHCKQMILPNISLALEHASSDLNYDFSKLESINLV 145
+ K LP LN + GSI EK LHLH KQM+LPN+SLAL++ D S LESI LV
Sbjct: 391 SKRKNLPFDLNMDSGSIDEKNLRLHLHSKQMVLPNVSLALQNVKLHAECDLSGLESIELV 450
Query: 144 APLPLHMQRSWN 109
AP+P +MQ+SW+
Sbjct: 451 APMPSYMQKSWD 462
>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like [Solanum
tuberosum]
Length = 467
Score = 469 bits (1208), Expect = e-129
Identities = 250/467 (53%), Positives = 320/467 (68%), Gaps = 11/467 (2%)
Frame = -1
Query: 1476 RQFLRSPATITAVTETLFKQQCYRLSSTAVKEETNPLTEKKHSGGEKGNGKWVTLPPFSP 1297
RQ + + + ++ QC+ ++ + N E KW+TLPPF+
Sbjct: 15 RQLFAASDDVQTLYSAFYRFQCHYATTVTAAQVCNR--------NENEKAKWLTLPPFTA 66
Query: 1296 TIDGVSLGKRIS--KRGGNDTIETTTSALKWVLRCCPHIPRSLVQKLFRLRQVRRECVGG 1123
T++G +LG+ ++ K + T +ALKWV RCCP +P+SLVQKLFRLRQVRR+
Sbjct: 67 TVNGAALGRELAGVKMDVKENSTNTMTALKWVQRCCPELPKSLVQKLFRLRQVRRD---- 122
Query: 1122 EVDGGTNAQESRLKRVGAKDVMNEGERIFLPISVQGSPVKKPEN-KCSEEEMNFILGLEL 946
+N +E R KRV AK+ MN G+RIFLPI+VQ P +K SEEE F+ LEL
Sbjct: 123 ----SSNVEEQRPKRVSAKESMNVGDRIFLPITVQKFPSEKVVYYPSSEEERKFVHSLEL 178
Query: 945 YKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRYNFEDAPRLVHRLDRDSSGILVMG 766
YKD I+ +NKPP +PVQGG+GIK+SLD LAA +R+ + +APRLVHRLDRD SG+LVMG
Sbjct: 179 YKDPEIVVVNKPPGMPVQGGIGIKRSLDELAAKYMRHEYSEAPRLVHRLDRDCSGLLVMG 238
Query: 765 RTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQKRYLALVFGVPRQSKGLISVPLTKVV 586
RTQ S + LHSIFREKT ++++++ KR LQK+Y ALV G PR+S G+IS PL K+V
Sbjct: 239 RTQLSASALHSIFREKTFD-SQNEDLESKKRILQKKYWALVIGCPRRSGGIISAPLGKLV 297
Query: 585 LDDGKSERITIAG--RASSSQHAMTEYRVIETSAYGYTWLELSPITGRKHQLRVHCAEVL 412
LD+GKSERITI RA S+Q+A+TEYR+I +S GYTWLELSP+TGRKHQLRVHCAE L
Sbjct: 298 LDNGKSERITIMSDVRAPSAQYAVTEYRIIGSSEKGYTWLELSPLTGRKHQLRVHCAEAL 357
Query: 411 GTPIVGDYKYGWQAHRRWEPLPPYPNE------ELVEEKLLPLGLNSECGSISEKQPHLH 250
GTPIVGDYKYGWQAHR+ + L P P ++ +K P L GSIS+KQPHLH
Sbjct: 358 GTPIVGDYKYGWQAHRKLKHL-PLPTSVLNLGVQIPRQKPDPFNLRLGNGSISDKQPHLH 416
Query: 249 LHCKQMILPNISLALEHASSDLNYDFSKLESINLVAPLPLHMQRSWN 109
LHCK+M+LPNISLAL+ A + D +ESI LVAPLP HMQ+SW+
Sbjct: 417 LHCKEMVLPNISLALQRAQVVSDTDLVDVESIKLVAPLPFHMQKSWD 463
>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
sativus]
Length = 471
Score = 469 bits (1206), Expect = e-129
Identities = 248/472 (52%), Positives = 330/472 (69%), Gaps = 7/472 (1%)
Frame = -1
Query: 1503 KEMFQPSYLRQFLRSPATITAVTETLFKQQCYRLSST-AVKEETNPLTEKKHSGGEKGNG 1327
+ +F+PS + + SP+ E L+ + L ST A+ + P++++K+ EKG+
Sbjct: 4 RALFRPSVILR--TSPSCTDPSGEILYFSIFHVLKSTLALSNASEPVSQQKN---EKGSN 58
Query: 1326 KWVTLPPFSPTIDGVSLGKRISKRGGNDTIETTTSA---LKWVLRCCPHIPRSLVQKLFR 1156
+W TLPP++ T++G LG RI GG + +T+A LKWV+RCCP +PRSLVQKLFR
Sbjct: 59 RWFTLPPYTATVNGSILGNRIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQKLFR 118
Query: 1155 LRQVRRECVGGEVDGGTNAQESRLKRVGAKDVMNEGERIFLPISVQGSPVKKPENKCSEE 976
LR+VRR E +LKRV AKD++N G++IFLP+SVQ +K + C++E
Sbjct: 119 LRKVRRGSSMIENSEYNLEARDQLKRVAAKDILNVGDQIFLPMSVQVFSTEKTRDYCNKE 178
Query: 975 EMNFILGLELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRYNFEDAPRLVHRLD 796
E F+ L L+KD AI+ INKPP LPVQGG+G+K+SLD LAASCL Y + + PRLVHRLD
Sbjct: 179 EETFMHSLVLHKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLD 238
Query: 795 RDSSGILVMGRTQTSTAILHSIFREKTI-GMMEDKEIDWGKRYLQKRYLALVFGVPRQSK 619
RDSSGIL+MGRT TST++LHS+FREKT +D K+ L KRY ALV G PR+SK
Sbjct: 239 RDSSGILIMGRTSTSTSLLHSVFREKTFEASKHANHVDSEKKILLKRYWALVIGSPRRSK 298
Query: 618 GLISVPLTKVVLDDGKSERITIAGRASSS--QHAMTEYRVIETSAYGYTWLELSPITGRK 445
GLI+ PL K+VLDDG+SE+I + A Q A+T+Y+VI+ S +GYTWLEL P+TGRK
Sbjct: 299 GLITAPLGKIVLDDGRSEQIMVIDNAEPMPFQQAITQYKVIK-SHHGYTWLELCPLTGRK 357
Query: 444 HQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPLPPYPNEELVEEKLLPLGLNSECGSISEK 265
HQLRVHCAEVLGTPIVGDYKYGWQAH+ W+P ++ +++ LP GL+ E GSI+E
Sbjct: 358 HQLRVHCAEVLGTPIVGDYKYGWQAHKNWKPFCSNFHKNQGKKQFLPFGLDFESGSIAEN 417
Query: 264 QPHLHLHCKQMILPNISLALEHASSDLNYDFSKLESINLVAPLPLHMQRSWN 109
P LHLHCKQ+ LP++S AL + S L+ D S+LE + L APLP +MQ+SW+
Sbjct: 418 SPRLHLHCKQLTLPDVSFALHNDS--LDRDCSRLECLELDAPLPSYMQKSWD 467
>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
sativus]
Length = 466
Score = 469 bits (1206), Expect = e-129
Identities = 247/472 (52%), Positives = 332/472 (70%), Gaps = 7/472 (1%)
Frame = -1
Query: 1503 KEMFQPSYLRQFLRSPATITAVTETLFKQQCYRLSST-AVKEETNPLTEKKHSGGEKGNG 1327
+ +F+PS + + SP+ E L+ + L ST A+ + P++++K+ EKG+
Sbjct: 4 RALFRPSVILR--TSPSCTDPSGEILYFSIFHVLKSTLALSNASEPVSQQKN---EKGSN 58
Query: 1326 KWVTLPPFSPTIDGVSLGKRISKRGGNDTIETTTSA---LKWVLRCCPHIPRSLVQKLFR 1156
+W TLPP++ T++G LG RI GG + +T+A LKWV+RCCP +PRSLVQKLFR
Sbjct: 59 RWFTLPPYTATVNGSILGNRIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQKLFR 118
Query: 1155 LRQVRRECVGGEVDGGTNAQESRLKRVGAKDVMNEGERIFLPISVQGSPVKKPENKCSEE 976
LR+V R+ ++ G +LKRV AKD++N G++IFLP+SVQ +K + C++E
Sbjct: 119 LRKVPRQ-----LNVGCGNSHHQLKRVAAKDILNVGDQIFLPMSVQVFSTEKTRDYCNKE 173
Query: 975 EMNFILGLELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRYNFEDAPRLVHRLD 796
E F+ L L+KD AI+ INKPP LPVQGG+G+K+SLD LAASCL Y + + PRLVHRLD
Sbjct: 174 EETFMHSLVLHKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLD 233
Query: 795 RDSSGILVMGRTQTSTAILHSIFREKTI-GMMEDKEIDWGKRYLQKRYLALVFGVPRQSK 619
RDSSGIL+MGRT TST++LHS+FREKT +D K+ L KRY ALV G PR+SK
Sbjct: 234 RDSSGILIMGRTSTSTSLLHSVFREKTFEASKHANHVDSEKKILLKRYWALVIGSPRRSK 293
Query: 618 GLISVPLTKVVLDDGKSERITIAGRASSS--QHAMTEYRVIETSAYGYTWLELSPITGRK 445
GLI+ PL K+VLDDG+SE+I + A Q A+T+Y+VI+ S +GYTWLEL P+TGRK
Sbjct: 294 GLITAPLGKIVLDDGRSEQIMVIDNAEPMPFQQAITQYKVIK-SHHGYTWLELCPLTGRK 352
Query: 444 HQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPLPPYPNEELVEEKLLPLGLNSECGSISEK 265
HQLRVHCAEVLGTPIVGDYKYGWQAH+ W+P ++ +++ LP GL+ E GSI+E
Sbjct: 353 HQLRVHCAEVLGTPIVGDYKYGWQAHKNWKPFCSNFHKNQGKKQFLPFGLDFESGSIAEN 412
Query: 264 QPHLHLHCKQMILPNISLALEHASSDLNYDFSKLESINLVAPLPLHMQRSWN 109
P LHLHCKQ+ LP++S AL + S L+ D S+LE + L APLP +MQ+SW+
Sbjct: 413 NPRLHLHCKQLTLPDVSFALHNDS--LDRDCSRLECLELDAPLPSYMQKSWD 462
>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
lycopersicum]
Length = 467
Score = 467 bits (1202), Expect = e-129
Identities = 250/467 (53%), Positives = 319/467 (68%), Gaps = 11/467 (2%)
Frame = -1
Query: 1476 RQFLRSPATITAVTETLFKQQCYRLSSTAVKEETNPLTEKKHSGGEKGNGKWVTLPPFSP 1297
RQ + + + ++ QC+ ++ + N E KW+TLPPF+
Sbjct: 15 RQLFAASDDVQTLYSAFYRLQCHYATTVTDAQVCNR--------NENEKAKWLTLPPFTA 66
Query: 1296 TIDGVSLGKRIS--KRGGNDTIETTTSALKWVLRCCPHIPRSLVQKLFRLRQVRRECVGG 1123
++G +LG+ ++ K N+ T +ALKWV RCCP +P+SLVQKLFRLRQVRR+
Sbjct: 67 AVNGAALGRELAGVKMDVNENSTNTMTALKWVQRCCPELPKSLVQKLFRLRQVRRD---- 122
Query: 1122 EVDGGTNAQESRLKRVGAKDVMNEGERIFLPISVQGSPVKKPEN-KCSEEEMNFILGLEL 946
+N +E R KRV AK+ MN G+RIFLPI+VQ P +K SEEE F+ LEL
Sbjct: 123 ----SSNVEEQRPKRVSAKESMNVGDRIFLPITVQKFPSEKVVYYPSSEEERKFVHSLEL 178
Query: 945 YKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRYNFEDAPRLVHRLDRDSSGILVMG 766
YKD+ II +NKPP +PVQGG+GIK+SLD LAA + + + +APRLVHRLDRD SG+LVMG
Sbjct: 179 YKDAEIIVVNKPPGMPVQGGIGIKRSLDELAAKYMSHQYSEAPRLVHRLDRDCSGLLVMG 238
Query: 765 RTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQKRYLALVFGVPRQSKGLISVPLTKVV 586
RTQ S + LHSIFREKT ++++++ KR LQK+Y ALV G PR+S G+IS PL K+V
Sbjct: 239 RTQLSASALHSIFREKTFD-SQNEDLESKKRILQKKYWALVIGCPRRSGGIISAPLGKLV 297
Query: 585 LDDGKSERITIAG--RASSSQHAMTEYRVIETSAYGYTWLELSPITGRKHQLRVHCAEVL 412
LD+GKSERITI R S+Q+A+TEYR+I +S GYTWLELSP+TGRKHQLRVHCAE L
Sbjct: 298 LDNGKSERITIMSDVREPSAQYAVTEYRIIGSSEKGYTWLELSPLTGRKHQLRVHCAEAL 357
Query: 411 GTPIVGDYKYGWQAHRRWEPLPPYPNE------ELVEEKLLPLGLNSECGSISEKQPHLH 250
GTPIVGDYKYGWQAHR+ + L P P E+ +K P L GSIS+KQPHLH
Sbjct: 358 GTPIVGDYKYGWQAHRKLKHL-PLPTSVLNLVVEIPRQKPDPFNLRLGNGSISDKQPHLH 416
Query: 249 LHCKQMILPNISLALEHASSDLNYDFSKLESINLVAPLPLHMQRSWN 109
LHCK+M+LPNISLAL+ A + D +ESI LVAPLP HMQ+SW+
Sbjct: 417 LHCKEMVLPNISLALQRAQVVSDADLVDVESIKLVAPLPFHMQKSWD 463
>ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
gi|548850328|gb|ERN08832.1| hypothetical protein
AMTR_s00015p00025410 [Amborella trichopoda]
Length = 457
Score = 466 bits (1198), Expect = e-128
Identities = 236/410 (57%), Positives = 302/410 (73%), Gaps = 4/410 (0%)
Frame = -1
Query: 1326 KWVTLPPFSPTIDGVSLGKRISKRGGNDTIETTTSALKWVLRCCPHIPRSLVQKLFRLRQ 1147
KW TLP F G SL IS +T+ALKWVLRCCP +PRSL+QKLFRLRQ
Sbjct: 48 KWFTLPSFP----GASLSPSIST--AKTAKAPSTTALKWVLRCCPQVPRSLIQKLFRLRQ 101
Query: 1146 VRRECVGGEVDGGTN--AQESRLKRVGAKDVMNEGERIFLPISVQGSPVKKPENKCSEEE 973
VR+E + + + AQ ++KRV AKD +N G+RIFLPI+V + + + C++EE
Sbjct: 102 VRKESLNPAIASCLHKQAQYQQIKRVFAKDTLNSGDRIFLPITVNPAVEVEDDYICNKEE 161
Query: 972 MNFILGLELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRYNFEDAPRLVHRLDR 793
M +I LE+YKD+AI+ +NKPP LPVQGG G+K SLDVL AS L+Y++ + PRLVHRLD+
Sbjct: 162 MEYIRSLEVYKDAAIVVVNKPPGLPVQGGTGVKLSLDVLVASSLKYDYSEVPRLVHRLDQ 221
Query: 792 DSSGILVMGRTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQKRYLALVFGVPRQSKGL 613
DSSGILVMGRTQ ST +LHSIFR+KT G + +I K L+++Y ALV G P+ S+GL
Sbjct: 222 DSSGILVMGRTQESTTLLHSIFRDKTCGASFNVDIKNSKIILKRKYWALVIGNPQPSEGL 281
Query: 612 ISVPLTKVVLDDGKSERITIA--GRASSSQHAMTEYRVIETSAYGYTWLELSPITGRKHQ 439
IS PL+K++LDDGKSERIT++ + S++HA+TEYRV+ +S +G+TWLEL P TGRKHQ
Sbjct: 282 ISAPLSKLLLDDGKSERITVSEDSKNKSARHAITEYRVLRSSGHGFTWLELYPRTGRKHQ 341
Query: 438 LRVHCAEVLGTPIVGDYKYGWQAHRRWEPLPPYPNEELVEEKLLPLGLNSECGSISEKQP 259
LRVHCAEVLGTPI+GDYKYGW AHR+W+P P EE + K P GL+ E GS+S+K+P
Sbjct: 342 LRVHCAEVLGTPILGDYKYGWNAHRKWKPFPTLKFEERLNRK-APFGLDLEGGSVSDKKP 400
Query: 258 HLHLHCKQMILPNISLALEHASSDLNYDFSKLESINLVAPLPLHMQRSWN 109
LHLHC+QM LPN+SLA +H D SKLE ++LVAPLPLHM+RSW+
Sbjct: 401 RLHLHCRQMTLPNMSLAFQHLHEQSVDDLSKLEKLDLVAPLPLHMRRSWD 450
>ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Capsella rubella]
gi|482566291|gb|EOA30480.1| hypothetical protein
CARUB_v10013603mg [Capsella rubella]
Length = 476
Score = 452 bits (1163), Expect = e-124
Identities = 237/424 (55%), Positives = 299/424 (70%), Gaps = 13/424 (3%)
Frame = -1
Query: 1341 EKGNGKWVTLPPFSPTIDGVSLGKRISKRGGNDTIET---TTSALKWVLRCCPHIPRSLV 1171
+ GKW+TLPPFSPT+DG ++GK ++ G + T T TT+AL+W+LRC P +PR+LV
Sbjct: 49 DNARGKWLTLPPFSPTVDGTAVGKELASEGDSITGSTDSSTTTALRWILRCRPDLPRTLV 108
Query: 1170 QKLFRLRQVRRE----CVGGEVDGGTNAQESRLKRVGAKDVMNEGERIFLPISVQGS--- 1012
QKLFRLRQVRRE C G EV Q S+LKRV AK+ +N G+RI+LP+SV
Sbjct: 109 QKLFRLRQVRREMSVSCDGDEV------QRSQLKRVAAKESLNVGDRIYLPLSVDNDAPP 162
Query: 1011 -PVKKPENKCSEEEMNFILGLELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRY 835
P KK +CSEEE F+ L LYKD +II +NKP + VQGG GIK S+D LAA+CL +
Sbjct: 163 PPAKKESFRCSEEERKFVCSLVLYKDPSIIVLNKPHGMAVQGGTGIKTSIDELAATCLTF 222
Query: 834 NFEDAPRLVHRLDRDSSGILVMGRTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQKRY 655
+ ++PRLVHRLDRD SG+LV+ RTQT+ +LHSIFREKT G + + L+++Y
Sbjct: 223 DKSESPRLVHRLDRDCSGLLVLARTQTAATVLHSIFREKTSG-ASAYGVKKNIKSLKRKY 281
Query: 654 LALVFGVPRQSKGLISVPLTKVVLDDGKSERITI--AGRASSSQHAMTEYRVIETSAYGY 481
+ALV G PR+ +G IS PL KVV+DDGKS+RIT+ G S+QHA+TEYRVIE+S +GY
Sbjct: 282 MALVIGCPRRQRGQISAPLRKVVVDDGKSDRITVNDNGELVSTQHAITEYRVIESSPHGY 341
Query: 480 TWLELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPLPPYPNEELVEEKLLPL 301
TWLEL P+TGRKHQLRVHCAEVLGTPIVGDYKYGWQAH+ EPL N + + P
Sbjct: 342 TWLELRPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKSREPLVTSENTP-TKPQSSPF 400
Query: 300 GLNSECGSISEKQPHLHLHCKQMILPNISLALEHASSDLNYDFSKLESINLVAPLPLHMQ 121
GL+ + G +S KQPHLHLH KQ+ LPNIS LE + D S ++S+ APLP HMQ
Sbjct: 401 GLDLDGGDVSSKQPHLHLHSKQIDLPNISQLLEKMQVSSDSDISDIDSLKFDAPLPTHMQ 460
Query: 120 RSWN 109
S+N
Sbjct: 461 LSFN 464
>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
pseudouridine synthase 4, mitochondrial; AltName:
Full=RNA pseudouridylate synthase 4; AltName:
Full=RNA-uridine isomerase 4; Flags: Precursor
gi|11994467|dbj|BAB02469.1| unnamed protein product
[Arabidopsis thaliana] gi|110737723|dbj|BAF00800.1|
hypothetical protein [Arabidopsis thaliana]
gi|134031916|gb|ABO45695.1| At3g19440 [Arabidopsis
thaliana] gi|332642719|gb|AEE76240.1| RNA pseudourine
synthase 4 [Arabidopsis thaliana]
Length = 477
Score = 451 bits (1160), Expect = e-124
Identities = 247/463 (53%), Positives = 313/463 (67%), Gaps = 10/463 (2%)
Frame = -1
Query: 1467 LRSPATITAVTETLFKQQCYRLSSTAVKEETNPLTEKKHSGGEKGNGKWVTLPPFSPTID 1288
LR ++ T + FK LS+ A + + T + + GKW+TLPPFSPTID
Sbjct: 11 LRRQLQSSSPTISTFKNPTKALSAAAHQSTRSYSTTQT----DDSRGKWLTLPPFSPTID 66
Query: 1287 GVSLGKRISKRGGN---DTIETTTSALKWVLRCCPHIPRSLVQKLFRLRQVRRECVGGEV 1117
G ++GK + G + T + T+AL+W+LRC P +PR+LVQKLFRLRQVRRE + V
Sbjct: 67 GTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQKLFRLRQVRRE-MSMSV 125
Query: 1116 DGGTNAQESRLKRVGAKDVMNEGERIFLPISV-----QGSPVKKPENKCSEEEMNFILGL 952
DG Q S+LKRV AK+ +N G+RI+LP+SV Q P KK +CS+EE F+ L
Sbjct: 126 DGD-ELQRSQLKRVAAKESLNVGDRIYLPLSVDNDTPQTPPAKKESFQCSDEERKFVCSL 184
Query: 951 ELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRYNFEDAPRLVHRLDRDSSGILV 772
LYKD AII +NKP L VQGG GIK S+D LAASCL+++ ++PRLVHRLDRD SG+LV
Sbjct: 185 VLYKDPAIIVLNKPHGLAVQGGSGIKTSIDELAASCLKFDKSESPRLVHRLDRDCSGLLV 244
Query: 771 MGRTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQKRYLALVFGVPRQSKGLISVPLTK 592
+ RTQT+ +LHSIFREKT G + + L+++Y+ALV G P + +G IS PL K
Sbjct: 245 LARTQTAATVLHSIFREKTTG-ASAYGVKKNVKSLKRKYMALVIGCPPRQRGQISAPLRK 303
Query: 591 VVLDDGKSERITI--AGRASSSQHAMTEYRVIETSAYGYTWLELSPITGRKHQLRVHCAE 418
VV+DDGKSERIT+ G S+QHA+TEYRVIE+S +GYTWLEL P+TGRKHQLRVHCAE
Sbjct: 304 VVVDDGKSERITVNDNGELVSTQHAITEYRVIESSPHGYTWLELRPLTGRKHQLRVHCAE 363
Query: 417 VLGTPIVGDYKYGWQAHRRWEPLPPYPNEELVEEKLLPLGLNSECGSISEKQPHLHLHCK 238
VLGTPIVGDYKYGWQAH+ EP N ++ P GL+ + G +S KQPHLHLH K
Sbjct: 364 VLGTPIVGDYKYGWQAHKAREPFVSSENNP-TKQSSSPFGLDLDGGDVSSKQPHLHLHSK 422
Query: 237 QMILPNISLALEHASSDLNYDFSKLESINLVAPLPLHMQRSWN 109
Q+ LPNIS LE + D S L+S+ APLP HMQ S+N
Sbjct: 423 QIDLPNISQLLEKMQVSSDSDISDLDSLKFDAPLPSHMQLSFN 465
>gb|ESW29223.1| hypothetical protein PHAVU_002G053600g [Phaseolus vulgaris]
Length = 432
Score = 449 bits (1155), Expect = e-123
Identities = 239/425 (56%), Positives = 300/425 (70%), Gaps = 8/425 (1%)
Frame = -1
Query: 1359 KKHSGGEKGNGKWVTLPPFSPTIDGVSLGKRISKRGGNDTIETTTSALKWVLRCCPHIPR 1180
++ S K KW+TLPP + + GK +K GN+ T T+ALKW++RCCP P
Sbjct: 17 RQMSMARKWEEKWLTLPPVAASGSVEVKGK--TKGKGNEVSSTPTTALKWIVRCCPSAPI 74
Query: 1179 SLVQKLFRLRQVRRECVGGEVDGGTNAQESRLKRVGAKDVMNEGERIFLPISVQG--SPV 1006
SL+ KLFRLRQVR + LKRV AKD +N G+RI LP SVQ +P
Sbjct: 75 SLLHKLFRLRQVRVL---------SPPHTETLKRVAAKDTLNSGDRILLPQSVQQKPTPT 125
Query: 1005 KKPENKCSEEEMNFILGLELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRYNFE 826
+KP + + +++NFI L ++KD AI+ +NKPP +PVQGG+ IK SLDV+AA+CL Y +
Sbjct: 126 RKPHSSLTPQQINFIRTLVIHKDPAILVLNKPPGMPVQGGINIKHSLDVVAAACLNYEYS 185
Query: 825 DAPRLVHRLDRDSSGILVMGRTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQKRYLAL 646
+ PRLVHRLDRD SGILVMGRTQTST +LHSIFREKT ++D E + KR LQ+RY AL
Sbjct: 186 EPPRLVHRLDRDCSGILVMGRTQTSTTVLHSIFREKTSRALDDTEEE--KRILQRRYWAL 243
Query: 645 VFGVPRQSKGLISVPLTKVVLDDGKSERITIAGRAS--SSQHAMTEYRVIETSAYGYTWL 472
V G PR SKGL++ L KVV+D+GKS+RIT+ ++ SSQHA+TEYRVI +S+ GYTWL
Sbjct: 244 VLGRPRCSKGLVTASLGKVVVDNGKSDRITVVDNSTSLSSQHAITEYRVIASSSQGYTWL 303
Query: 471 ELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPLPPYPNEELVEEKL----LP 304
ELSP+TGRKHQLRVHCAEVLGTPIVGDYKYGWQAHR+W E+ EE L LP
Sbjct: 304 ELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWGNFDLSNVEDSCEEHLKEETLP 363
Query: 303 LGLNSECGSISEKQPHLHLHCKQMILPNISLALEHASSDLNYDFSKLESINLVAPLPLHM 124
GLN GSISE +P LHLHCK+++LPNIS AL++ S N D S++E + LVA LP +M
Sbjct: 364 FGLNLNNGSISENRPRLHLHCKKIVLPNISEALQNVQSFSNCDLSQVEGLQLVADLPPYM 423
Query: 123 QRSWN 109
QRSW+
Sbjct: 424 QRSWD 428
>gb|EEE69173.1| hypothetical protein OsJ_28343 [Oryza sativa Japonica Group]
Length = 465
Score = 449 bits (1155), Expect = e-123
Identities = 237/419 (56%), Positives = 303/419 (72%), Gaps = 8/419 (1%)
Frame = -1
Query: 1344 GEKGNGKWVTLPPFSPTIDGVSLGKRISKRGGNDTI-ETTTSALKWVLRCCPHIPRSLVQ 1168
GE+G W+ LPPF+P +D + + IS+ GG E +A+KWV RCCP +P SLVQ
Sbjct: 45 GERGKSPWLQLPPFAP-LDAAAAARAISRGGGEGGDGEQGATAIKWVRRCCPDLPTSLVQ 103
Query: 1167 KLFRLRQVRRECVGGEVDGG-TNAQESRLKRVGAKDVMNEGERIFLPISVQGSPVKKPEN 991
KLFRLR+V++ V E+ +A++ RL+RV AKD + G+ +FLP++++ S V +
Sbjct: 104 KLFRLRKVKKNVVTAEISSADASAEQHRLRRVSAKDQLMPGDILFLPVNLKESSVAEKTK 163
Query: 990 KC-SEEEMNFILGLELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRYNFEDAPR 814
K + E+NF+ GLE+YKD AII +NKPP +PVQGG+GIK S+DVLA S N +APR
Sbjct: 164 KFDNRNEINFLRGLEIYKDEAIIVVNKPPGMPVQGGVGIKNSIDVLA-SMFEENSSEAPR 222
Query: 813 LVHRLDRDSSGILVMGRTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQKRYLALVFGV 634
LVHRLDRD SGILV+GR Q ST++LH+IFREKT D D + LQ++Y+ALV G
Sbjct: 223 LVHRLDRDCSGILVLGRNQLSTSMLHAIFREKTA----DALADGTQHVLQRKYVALVIGT 278
Query: 633 PRQSKGLISVPLTKVVLDDGKSERITI--AGRASSSQHAMTEYRVIETSAYGYTWLELSP 460
PR KGL+S PL K++L DGKSER+TI + A+S Q A+TEYRVIE+ GYTWLEL P
Sbjct: 279 PRHPKGLLSAPLAKILLQDGKSERLTIRASSNAASVQDALTEYRVIESCPQGYTWLELFP 338
Query: 459 ITGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWE--PLPPYPNEELVEEKLLPLGLNSE 286
TGRKHQLRVHCAEVLGTPIVGDYKYG QAH++W PLP +EEL+ ++ LP GL
Sbjct: 339 RTGRKHQLRVHCAEVLGTPIVGDYKYGRQAHQKWMPLPLPRTIDEELLRKRKLPFGLVVG 398
Query: 285 CGSISEKQPHLHLHCKQMILPNISLALEH-ASSDLNYDFSKLESINLVAPLPLHMQRSW 112
GSI+E+QP LHLHCKQM+LP++S+AL SSD+N DFS LE +N VAPLPLHM+ SW
Sbjct: 399 GGSIAEEQPQLHLHCKQMVLPDVSVALHRLQSSDVNPDFSDLEKLNFVAPLPLHMRLSW 457
>gb|EEC84066.1| hypothetical protein OsI_30347 [Oryza sativa Indica Group]
Length = 465
Score = 449 bits (1154), Expect = e-123
Identities = 236/419 (56%), Positives = 303/419 (72%), Gaps = 8/419 (1%)
Frame = -1
Query: 1344 GEKGNGKWVTLPPFSPTIDGVSLGKRISKRGGNDTI-ETTTSALKWVLRCCPHIPRSLVQ 1168
GE+G W+ LPPF+P +D + + IS+ GG E +A+KWV RCCP +P SLVQ
Sbjct: 45 GERGKSPWLQLPPFAP-LDAAAAARAISRGGGEGGDGEQGATAIKWVRRCCPDLPTSLVQ 103
Query: 1167 KLFRLRQVRRECVGGEVDGG-TNAQESRLKRVGAKDVMNEGERIFLPISVQGSPVKKPEN 991
KLFRLR+V++ V E+ +A++ RL+RV AKD + G+ +FLP++++ S V +
Sbjct: 104 KLFRLRKVKKNVVTAEISSADASAEQHRLRRVSAKDQLMPGDILFLPVNLKESSVAEKTK 163
Query: 990 KC-SEEEMNFILGLELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRYNFEDAPR 814
K + E+NF+ GLE+YKD AII +NKPP +PVQGG+GIK S+DVLA S N +APR
Sbjct: 164 KFDNRNEINFLRGLEIYKDEAIIVVNKPPGMPVQGGVGIKNSIDVLA-SMFEENSSEAPR 222
Query: 813 LVHRLDRDSSGILVMGRTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQKRYLALVFGV 634
LVHRLDRD SGILV+GR Q ST++LH+IFREKT D D + LQ++Y+ALV G
Sbjct: 223 LVHRLDRDCSGILVLGRNQLSTSMLHAIFREKTA----DALADGTQHVLQRKYVALVIGT 278
Query: 633 PRQSKGLISVPLTKVVLDDGKSERITI--AGRASSSQHAMTEYRVIETSAYGYTWLELSP 460
PR KGL+S PL K++L DGKSER+T+ + A+S Q A+TEYRVIE+ GYTWLEL P
Sbjct: 279 PRHPKGLLSAPLAKILLQDGKSERLTVRASSNAASVQDALTEYRVIESCPQGYTWLELFP 338
Query: 459 ITGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWE--PLPPYPNEELVEEKLLPLGLNSE 286
TGRKHQLRVHCAEVLGTPIVGDYKYG QAH++W PLP +EEL+ ++ LP GL
Sbjct: 339 RTGRKHQLRVHCAEVLGTPIVGDYKYGRQAHQKWMPLPLPRTIDEELLRKRKLPFGLVVG 398
Query: 285 CGSISEKQPHLHLHCKQMILPNISLALEH-ASSDLNYDFSKLESINLVAPLPLHMQRSW 112
GSI+E+QP LHLHCKQM+LP++S+AL SSD+N DFS LE +N VAPLPLHM+ SW
Sbjct: 399 GGSIAEEQPQLHLHCKQMVLPDVSVALHRLQSSDVNPDFSDLEKLNFVAPLPLHMRLSW 457
>ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutrema salsugineum]
gi|557107647|gb|ESQ47954.1| hypothetical protein
EUTSA_v10020633mg [Eutrema salsugineum]
Length = 477
Score = 445 bits (1145), Expect = e-122
Identities = 249/469 (53%), Positives = 315/469 (67%), Gaps = 12/469 (2%)
Frame = -1
Query: 1479 LRQFLRSPA-TITAVTETLFKQQCYRLSSTAVKEETNPLTEKKHSGGEKGNGKWVTLPPF 1303
LR+ LRSP+ TI++V F+ LS A + + T + GKW+TLPPF
Sbjct: 11 LRRHLRSPSPTISSV----FRDPSGALS--AANQRRSYGTPLADDDDDDPRGKWLTLPPF 64
Query: 1302 SPTIDGVSLGKRISKRGGN--DTIETTTSALKWVLRCCPHIPRSLVQKLFRLRQVRRE-- 1135
SPTID ++GK + G + + + +T+AL+W+LRC P +PR+LVQKLFRLRQVRRE
Sbjct: 65 SPTIDAAAVGKELFSDGDSVKASSDGSTTALRWILRCRPDLPRTLVQKLFRLRQVRREMS 124
Query: 1134 --CVGGEVDGGTNAQESRLKRVGAKDVMNEGERIFLPISVQGS---PVKKPENKCSEEEM 970
C G E+ Q S+LKRV AK+ +N G+RI+LP+SV P KK CSEEE
Sbjct: 125 LSCDGDEL------QRSQLKRVAAKESLNLGDRIYLPLSVNNDAPPPAKKESFCCSEEER 178
Query: 969 NFILGLELYKDSAIIAINKPPKLPVQGGLGIKKSLDVLAASCLRYNFEDAPRLVHRLDRD 790
F+ L LYKD AII +NKP L VQGG GIK S+D LAA+CL + ++PRLVHRLDRD
Sbjct: 179 KFVCSLVLYKDPAIIVLNKPHGLAVQGGTGIKISIDELAATCLTFGKSESPRLVHRLDRD 238
Query: 789 SSGILVMGRTQTSTAILHSIFREKTIGMMEDKEIDWGKRYLQKRYLALVFGVPRQSKGLI 610
SG+LV+GRTQT+ +LHSIFREKT G + + L+++YLALV G PR+ +G I
Sbjct: 239 CSGLLVLGRTQTAATVLHSIFREKTSG-ASAYSVKKNIKSLKRKYLALVIGCPRRQRGQI 297
Query: 609 SVPLTKVVLDDGKSERITI--AGRASSSQHAMTEYRVIETSAYGYTWLELSPITGRKHQL 436
S PL KVV+DDGKS+RIT+ G S+QHA+TEYRVIE+S +GYTWLEL P+TGRKHQL
Sbjct: 298 SAPLRKVVVDDGKSDRITVNDNGELVSTQHAITEYRVIESSPHGYTWLELRPLTGRKHQL 357
Query: 435 RVHCAEVLGTPIVGDYKYGWQAHRRWEPLPPYPNEELVEEKLLPLGLNSECGSISEKQPH 256
RVHCAEVLGTPI+GDYKYGWQAH+ EP N + L P GL+ + G +S KQPH
Sbjct: 358 RVHCAEVLGTPILGDYKYGWQAHKSREPFVSSGNTP-TKPSLSPFGLDLDGGDVSSKQPH 416
Query: 255 LHLHCKQMILPNISLALEHASSDLNYDFSKLESINLVAPLPLHMQRSWN 109
LHLH KQ+ LPNIS LE + D S+ + + APLP HMQ S+N
Sbjct: 417 LHLHSKQIDLPNISQLLEQLEVSSDSDSSEHDCLKFDAPLPAHMQLSFN 465