BLASTX nr result
ID: Acanthopanax24_contig00025764
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00025764
(607 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 101 4e-21
ref|XP_018632630.1| PREDICTED: DNA-directed RNA polymerase V sub... 98 6e-20
ref|XP_018632629.1| PREDICTED: DNA-directed RNA polymerase V sub... 98 6e-20
ref|XP_016447890.1| PREDICTED: DNA-directed RNA polymerase V sub... 97 1e-19
ref|XP_016454834.1| PREDICTED: DNA-directed RNA polymerase V sub... 96 2e-19
ref|XP_018632619.1| PREDICTED: DNA-directed RNA polymerase V sub... 96 3e-19
ref|XP_018632612.1| PREDICTED: DNA-directed RNA polymerase V sub... 96 3e-19
ref|XP_018632606.1| PREDICTED: DNA-directed RNA polymerase V sub... 96 3e-19
ref|XP_018632617.1| PREDICTED: DNA-directed RNA polymerase V sub... 96 4e-19
ref|XP_018632623.1| PREDICTED: DNA-directed RNA polymerase V sub... 95 7e-19
ref|XP_018632616.1| PREDICTED: DNA-directed RNA polymerase V sub... 94 2e-18
ref|XP_015056787.1| PREDICTED: DNA-directed RNA polymerase V sub... 93 2e-18
ref|XP_018632614.1| PREDICTED: DNA-directed RNA polymerase V sub... 92 8e-18
ref|XP_019066486.1| PREDICTED: DNA-directed RNA polymerase V sub... 90 3e-17
ref|XP_019225779.1| PREDICTED: DNA-directed RNA polymerase V sub... 89 7e-17
ref|XP_019225778.1| PREDICTED: DNA-directed RNA polymerase V sub... 89 7e-17
ref|XP_022012121.1| DNA-directed RNA polymerase V subunit 1-like... 87 2e-16
gb|OTF95291.1| putative nuclear RNA polymerase D1B [Helianthus a... 87 2e-16
ref|XP_018632625.1| PREDICTED: DNA-directed RNA polymerase V sub... 86 1e-15
gb|PHT74769.1| DNA-directed RNA polymerase V subunit 1 [Capsicum... 82 2e-14
>ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
1 [Nicotiana sylvestris]
Length = 2055
Score = 101 bits (251), Expect = 4e-21
Identities = 60/199 (30%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Frame = +2
Query: 47 ISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAV 226
+SS K VE D S W KKV+K D G+W + E W ++ SE L
Sbjct: 1547 VSSWGKKVENDGVSSWGKKVEK-----DGGSWGKKVEQAENHSHQSWKEEKSESLSSWGK 1601
Query: 227 PLISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKAGEAD------WNKKDMQP 385
+ V WGK+ E D W K VE+ G WGKK +A+ W ++ +
Sbjct: 1602 KVEKDGVSSWGKKVENDGVSSWGKKVEKDG-----GSWGKKVEQAENHSHQSWKEEKSES 1656
Query: 386 LPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK-DSQSLPNQ----DYPS 550
L + WG+K E+D + WGKK EK + W +K +S++ P +
Sbjct: 1657 LSSWGKKVEKDGVSSWGKKGENDGVSSWGKKVEKDGGSSWGEKVESENTPRPSGKGEQSG 1716
Query: 551 STGNWSKRSVEDSEDAWGK 607
S +W K+ ED + GK
Sbjct: 1717 SWSSWGKQVKEDGGASSGK 1735
Score = 90.5 bits (223), Expect = 2e-17
Identities = 72/232 (31%), Positives = 96/232 (41%), Gaps = 32/232 (13%)
Frame = +2
Query: 8 KGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDK-----SHNVEDSGAWSSWAKTGEES 172
K S P+++G S S S W KKVD+ S N E SG+ SSW K E+
Sbjct: 1394 KEVDSNPQQSGNTAQS-------GSWSAWGKKVDEAGNSQSGNEEQSGSLSSWGKKVEK- 1445
Query: 173 DQTQWNKKDSEPL---PDQAVPLISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWG 340
D W KK E P S ++ WGK+ E+D W K VE G S WG
Sbjct: 1446 DTGSWGKKVEEMESHNPQSGKDEKSGSLSSWGKKVEKDGDSSWGKKVEIDGG----SSWG 1501
Query: 341 KKA---GEADWNKK--DMQPLPDQAGLLNSSTA-GFWGEKSEDDSANGWGKKAEKAADTR 502
KK G + W KK + + Q+G S + WG+K E D + WGKK E +
Sbjct: 1502 KKVEIDGGSSWGKKVEEAENYSHQSGKEEKSESLSSWGKKVEKDGVSSWGKKVENDGVSS 1561
Query: 503 WNKK-----------------DSQSLPNQDYPSSTGNWSKRSVEDSEDAWGK 607
W KK S ++ S +W K+ +D +WGK
Sbjct: 1562 WGKKVEKDGGSWGKKVEQAENHSHQSWKEEKSESLSSWGKKVEKDGVSSWGK 1613
Score = 90.5 bits (223), Expect = 2e-17
Identities = 66/226 (29%), Positives = 94/226 (41%), Gaps = 25/226 (11%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDK------SHNVE-DSGAWSSWAKTG 163
N QS E +SS K VE+D S W KKV+ VE D G+W +
Sbjct: 1582 NHSHQSWKEEKSESLSSWGKKVEKDGVSSWGKKVENDGVSSWGKKVEKDGGSWGKKVEQA 1641
Query: 164 EESDQTQWNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGW-SKVERSGDKAQQSGWG 340
E W ++ SE L + V WGK+ E D W KVE+ G S WG
Sbjct: 1642 ENHSHQSWKEEKSESLSSWGKKVEKDGVSSWGKKGENDGVSSWGKKVEKDGG----SSWG 1697
Query: 341 KKAGEADWNKKDMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK-- 514
+K + + P P G + S + WG++ ++D GKK EK + W KK
Sbjct: 1698 EKV------ESENTPRPSGKGEQSGSWSS-WGKQVKEDGGASSGKKVEKDGGSSWGKKVD 1750
Query: 515 DSQSLPNQ----DYPSSTGNWSKRSVED-----------SEDAWGK 607
+ + P+Q + S +W K+ +D SE +WGK
Sbjct: 1751 EPEDKPHQSGNGEQSGSWSSWGKKVEKDGGSLDGPKQSNSESSWGK 1796
Score = 84.3 bits (207), Expect = 3e-15
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 14/191 (7%)
Frame = +2
Query: 77 DSASGW---AKKVD----KSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLI 235
+S S W AK+VD +S N SG+WS+W K +E+ +Q ++
Sbjct: 1384 ESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSQSGNEEQ----------- 1432
Query: 236 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGE-ADWNKKDMQPLPDQAGLLN 412
S ++ WGK+ E+D G KVE QSG +K+G + W KK +
Sbjct: 1433 SGSLSSWGKKVEKDTGSWGKKVEEMESHNPQSGKDEKSGSLSSWGKK-----------VE 1481
Query: 413 SSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK------DSQSLPNQDYPSSTGNWSKR 574
WG+K E D + WGKK E + W KK S ++ S +W K+
Sbjct: 1482 KDGDSSWGKKVEIDGGSSWGKKVEIDGGSSWGKKVEEAENYSHQSGKEEKSESLSSWGKK 1541
Query: 575 SVEDSEDAWGK 607
+D +WGK
Sbjct: 1542 VEKDGVSSWGK 1552
Score = 64.3 bits (155), Expect = 2e-08
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Frame = +2
Query: 50 SSTAKIVEEDSASGWAKKVDKSHN-----VEDSGAWSSWAKTGEESDQTQWNKKDSEPLP 214
S+ K E+ SG + + K+ N V S +WSSW + ++++ + E L
Sbjct: 1325 SAWEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDDAENNPRQSGNGEQLE 1384
Query: 215 DQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQ---SGWGKKAGEADWNKKDMQP 385
+ WG +++E S ++SG+ AQ S WGKK EA ++ +
Sbjct: 1385 SWSA---------WGGKAKEVD----SNPQQSGNTAQSGSWSAWGKKVDEAGNSQSGNE- 1430
Query: 386 LPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEK-AADTRWNKKDSQSLPNQDYPSSTGN 562
+Q+G L+S WG+K E D+ + WGKK E+ + + KD +S S +
Sbjct: 1431 --EQSGSLSS-----WGKKVEKDTGS-WGKKVEEMESHNPQSGKDEKS-------GSLSS 1475
Query: 563 WSKRSVEDSEDAWGK 607
W K+ +D + +WGK
Sbjct: 1476 WGKKVEKDGDSSWGK 1490
>ref|XP_018632630.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X10
[Nicotiana tomentosiformis]
Length = 1955
Score = 97.8 bits (242), Expect = 6e-20
Identities = 74/234 (31%), Positives = 106/234 (45%), Gaps = 33/234 (14%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNV-------EDSGAWSSWAKTG 163
N QS E G +SS K VE+D S W K+V+++ N E SG+ SSW K
Sbjct: 1480 NSPRQSGNEEQSGSLSSWGKKVEKDGGS-WGKRVEETENHNHQSGKDEKSGSLSSWGKKV 1538
Query: 164 EESDQTQWNKKDSEPLPDQAVPLISSTVGG--WGKRSEEDAGDGWSK-VERSGDKAQQSG 334
E+ + W K + + GG WGK+ E D G W K VE+ G S
Sbjct: 1539 EKDGDSSWGKVEID--------------GGSSWGKKVEIDGGSSWGKKVEKDG----VSS 1580
Query: 335 WGKKA---GEADWNKK---DMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAAD 496
WGKK G + W +K + P P G + S + WG++ ++D WG+K EK
Sbjct: 1581 WGKKVEKDGGSSWGEKVEAENTPRPSGKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGG 1639
Query: 497 TRWNKK--DSQSLPNQ----DYPSSTGNWSKRSVED-----------SEDAWGK 607
+ W KK + + P+Q + P S +W K+ +D SE +WGK
Sbjct: 1640 SSWGKKVDEPEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQSNSESSWGK 1693
Score = 86.7 bits (213), Expect = 4e-16
Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Frame = +2
Query: 77 DSASGW---AKKVD----KSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLI 235
+S S W AK+VD +S N SG+WS+W K +E+ + + E
Sbjct: 1440 ESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQ--------- 1490
Query: 236 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGE-ADWNKKDMQPLPDQAGLLN 412
S ++ WGK+ E+D G +VE + + QSG +K+G + W KK + G +
Sbjct: 1491 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKVE 1550
Query: 413 SSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK----------DSQSLPNQDYPSSTG- 559
WG+K E D + WGKK EK + W KK + N PS G
Sbjct: 1551 IDGGSSWGKKVEIDGGSSWGKKVEKDGVSSWGKKVEKDGGSSWGEKVEAENTPRPSGKGE 1610
Query: 560 ------NWSKRSVEDSEDAWGK 607
+W K+ ED +WG+
Sbjct: 1611 QSGSWSSWGKQVKEDGGASWGE 1632
>ref|XP_018632629.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X9
[Nicotiana tomentosiformis]
Length = 1979
Score = 97.8 bits (242), Expect = 6e-20
Identities = 69/225 (30%), Positives = 99/225 (44%), Gaps = 24/225 (10%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQTQ 184
N QS + G +SS K VE+D S W KKV+K D G+W + E Q
Sbjct: 1517 NHNHQSGKDEKSGSLSSWGKKVEKDGVSSWGKKVEK-----DGGSWGKKVEQAEIHSQQS 1571
Query: 185 WNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKA---G 352
++ SE L WGK+ E+D G W K VE+ G WGKK G
Sbjct: 1572 GKEEKSESL------------SSWGKQVEKDGGSSWGKQVEKGGS------WGKKVEKDG 1613
Query: 353 EADWNKK---DMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK--D 517
+ W +K + P P G + S + WG++ ++D WG+K EK + W KK +
Sbjct: 1614 GSSWGEKVEAENTPRPSGKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKKVDE 1672
Query: 518 SQSLPNQ----DYPSSTGNWSKRSVED-----------SEDAWGK 607
+ P+Q + P S +W K+ +D SE +WGK
Sbjct: 1673 PEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQSNSESSWGK 1717
Score = 78.2 bits (191), Expect = 3e-13
Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 13/190 (6%)
Frame = +2
Query: 77 DSASGW---AKKVD----KSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLI 235
+S S W AK+VD +S N SG+WS+W K +E+ + + E
Sbjct: 1440 ESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQ--------- 1490
Query: 236 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGEADWNKKDMQPLPDQAGLLNS 415
S ++ WGK+ E+D G +VE + + QSG +K+G
Sbjct: 1491 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSG--------------------- 1529
Query: 416 STAGFWGEKSEDDSANGWGKKAEKAADTRWNKK------DSQSLPNQDYPSSTGNWSKRS 577
+ WG+K E D + WGKK EK + W KK SQ ++ S +W K+
Sbjct: 1530 -SLSSWGKKVEKDGVSSWGKKVEKDGGS-WGKKVEQAEIHSQQSGKEEKSESLSSWGKQV 1587
Query: 578 VEDSEDAWGK 607
+D +WGK
Sbjct: 1588 EKDGGSSWGK 1597
>ref|XP_016447890.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nicotiana
tabacum]
Length = 1506
Score = 97.1 bits (240), Expect = 1e-19
Identities = 69/212 (32%), Positives = 101/212 (47%), Gaps = 14/212 (6%)
Frame = +2
Query: 14 SQSMPERAGGLISSTAKIVEEDSASGWAKKVDK--SHNV-----EDSGAWSSWAKTGEES 172
SQS E G +SS K VE+D+ S W KKV++ SHN E SG+ SSW K E+
Sbjct: 998 SQSGNEEQSGSLSSWGKKVEKDTGS-WGKKVEEMESHNPQSGKDEKSGSLSSWGKKVEKD 1056
Query: 173 DQTQWNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAG 352
+ W KK + + V WGK+ E+D G KVE++ + + QS W ++
Sbjct: 1057 GVSSWGKK-----------VENDGVSSWGKKVEKDGGSWGKKVEQAENHSHQS-WKEEKS 1104
Query: 353 EA--DWNKKDMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK-DSQ 523
E+ W KK + WG+K E+D + WGKK EK + W +K +S+
Sbjct: 1105 ESLSSWGKK-----------VEKDGVSSWGKKGENDGVSSWGKKVEKDGGSSWGEKVESE 1153
Query: 524 SLPNQ----DYPSSTGNWSKRSVEDSEDAWGK 607
+ P + S +W K+ ED + GK
Sbjct: 1154 NTPRPSGKGEQSGSWSSWGKQVKEDGGASSGK 1185
Score = 90.1 bits (222), Expect = 3e-17
Identities = 61/205 (29%), Positives = 88/205 (42%), Gaps = 18/205 (8%)
Frame = +2
Query: 47 ISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAV 226
+SS K VE D S W KKV+K D G+W + E W ++ SE L
Sbjct: 1058 VSSWGKKVENDGVSSWGKKVEK-----DGGSWGKKVEQAENHSHQSWKEEKSESLSSWGK 1112
Query: 227 PLISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKAGEADWNKKDMQPLPDQAG 403
+ V WGK+ E D W K VE+ G S WG+K + + P P G
Sbjct: 1113 KVEKDGVSSWGKKGENDGVSSWGKKVEKDGG----SSWGEKV------ESENTPRPSGKG 1162
Query: 404 LLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK--DSQSLPNQ----DYPSSTGNW 565
+ S + WG++ ++D GKK EK + W KK + + P+Q + S +W
Sbjct: 1163 EQSGSWSS-WGKQVKEDGGASSGKKVEKDGGSSWGKKVDEPEDKPHQSGNGEQSGSWSSW 1221
Query: 566 SKRSVED-----------SEDAWGK 607
K+ +D SE +WGK
Sbjct: 1222 GKKVEKDGGSLDGPKQSNSESSWGK 1246
Score = 86.3 bits (212), Expect = 5e-16
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 14/191 (7%)
Frame = +2
Query: 77 DSASGW---AKKVD----KSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLI 235
+S S W AK+VD +S N SG+WS+W K +E+ +Q ++
Sbjct: 957 ESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSQSGNEEQ----------- 1005
Query: 236 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGE-ADWNKKDMQPLPDQAGLLN 412
S ++ WGK+ E+D G KVE QSG +K+G + W KK +
Sbjct: 1006 SGSLSSWGKKVEKDTGSWGKKVEEMESHNPQSGKDEKSGSLSSWGKK-----------VE 1054
Query: 413 SSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKKDSQSLPN------QDYPSSTGNWSKR 574
WG+K E+D + WGKK EK + W KK Q+ + ++ S +W K+
Sbjct: 1055 KDGVSSWGKKVENDGVSSWGKKVEKDGGS-WGKKVEQAENHSHQSWKEEKSESLSSWGKK 1113
Query: 575 SVEDSEDAWGK 607
+D +WGK
Sbjct: 1114 VEKDGVSSWGK 1124
Score = 67.4 bits (163), Expect = 2e-09
Identities = 61/192 (31%), Positives = 78/192 (40%), Gaps = 3/192 (1%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQTQ 184
N QS E +SS K VE+D S W KK E+ G SSW K E+ +
Sbjct: 1093 NHSHQSWKEEKSESLSSWGKKVEKDGVSSWGKK------GENDGV-SSWGKKVEKDGGSS 1145
Query: 185 WNKK-DSEPLP-DQAVPLISSTVGGWGKRSEEDAG-DGWSKVERSGDKAQQSGWGKKAGE 355
W +K +SE P S + WGK+ +ED G KVE+ G S WGKK E
Sbjct: 1146 WGEKVESENTPRPSGKGEQSGSWSSWGKQVKEDGGASSGKKVEKDGG----SSWGKKVDE 1201
Query: 356 ADWNKKDMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKKDSQSLPN 535
+ P Q+G N +G W + WGKK E KD SL
Sbjct: 1202 P-------EDKPHQSG--NGEQSGSW---------SSWGKKVE---------KDGGSLDG 1234
Query: 536 QDYPSSTGNWSK 571
+S +W K
Sbjct: 1235 PKQSNSESSWGK 1246
Score = 62.8 bits (151), Expect = 7e-08
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 9/195 (4%)
Frame = +2
Query: 50 SSTAKIVEEDSASGWAKKVDKSHN-----VEDSGAWSSWAKTGEESDQTQWNKKDSEPLP 214
S+ K E+ SG + + K+ N V S +WSSW + ++++ + E L
Sbjct: 898 SAWEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDDAENNPRQSGNGEQLE 957
Query: 215 DQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQ---SGWGKKAGEADWNKKDMQP 385
+ WG +++E S ++SG+ AQ S WGKK EA ++ +
Sbjct: 958 SWSA---------WGGKAKEVD----SNPQQSGNTAQSGSWSAWGKKVDEAGNSQSGNE- 1003
Query: 386 LPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEK-AADTRWNKKDSQSLPNQDYPSSTGN 562
+Q+G L+S WG+K E D+ + WGKK E+ + + KD +S S +
Sbjct: 1004 --EQSGSLSS-----WGKKVEKDTGS-WGKKVEEMESHNPQSGKDEKS-------GSLSS 1048
Query: 563 WSKRSVEDSEDAWGK 607
W K+ +D +WGK
Sbjct: 1049 WGKKVEKDGVSSWGK 1063
>ref|XP_016454834.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like, partial
[Nicotiana tabacum]
Length = 1252
Score = 95.9 bits (237), Expect = 2e-19
Identities = 69/225 (30%), Positives = 98/225 (43%), Gaps = 24/225 (10%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQTQ 184
N QS E +SS K VE+D S W KKV+K D G+W + E Q
Sbjct: 790 NHSHQSGKEEKSESLSSWGKKVEKDGVSSWGKKVEK-----DGGSWGKKVEQAEIHSQQS 844
Query: 185 WNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKA---G 352
++ SE L WGK+ E+D G W K VE+ G WGKK G
Sbjct: 845 GKEEKSESL------------SSWGKQVEKDGGSSWGKQVEKGGS------WGKKVEKDG 886
Query: 353 EADWNKK---DMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK--D 517
+ W +K + P P G + S + WG++ ++D WG+K EK + W KK +
Sbjct: 887 GSSWGEKVEAENTPRPSGKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKKVDE 945
Query: 518 SQSLPNQ----DYPSSTGNWSKRSVED-----------SEDAWGK 607
+ P+Q + P S +W K+ +D SE +WGK
Sbjct: 946 PEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQSNSESSWGK 990
Score = 85.5 bits (210), Expect = 1e-15
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Frame = +2
Query: 77 DSASGW---AKKVD----KSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLI 235
+S S W AK+VD +S N SG+WS+W K +E+ + + E
Sbjct: 652 ESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQ--------- 702
Query: 236 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGE-ADWNKKDMQPLPDQAGLLN 412
S ++ WGK+ E+D G +VE + + QSG +K+G + W KK + G +
Sbjct: 703 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKVE 762
Query: 413 SSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKKDSQSLPNQDYPSSTGNWSKRSVEDSE 592
WG+K E D + WGKK E+A + S ++ S +W K+ +D
Sbjct: 763 IDGGSSWGKKVEIDGGSSWGKKVEEA------ENHSHQSGKEEKSESLSSWGKKVEKDGV 816
Query: 593 DAWGK 607
+WGK
Sbjct: 817 SSWGK 821
>ref|XP_018632619.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X6
[Nicotiana tomentosiformis]
Length = 1998
Score = 95.9 bits (237), Expect = 3e-19
Identities = 69/225 (30%), Positives = 98/225 (43%), Gaps = 24/225 (10%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQTQ 184
N QS E +SS K VE+D S W KKV+K D G+W + E Q
Sbjct: 1536 NHSHQSGKEEKSESLSSWGKKVEKDGVSSWGKKVEK-----DGGSWGKKVEQAEIHSQQS 1590
Query: 185 WNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKA---G 352
++ SE L WGK+ E+D G W K VE+ G WGKK G
Sbjct: 1591 GKEEKSESL------------SSWGKQVEKDGGSSWGKQVEKGGS------WGKKVEKDG 1632
Query: 353 EADWNKK---DMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK--D 517
+ W +K + P P G + S + WG++ ++D WG+K EK + W KK +
Sbjct: 1633 GSSWGEKVEAENTPRPSGKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKKVDE 1691
Query: 518 SQSLPNQ----DYPSSTGNWSKRSVED-----------SEDAWGK 607
+ P+Q + P S +W K+ +D SE +WGK
Sbjct: 1692 PEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQSNSESSWGK 1736
Score = 85.5 bits (210), Expect = 1e-15
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Frame = +2
Query: 77 DSASGW---AKKVD----KSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLI 235
+S S W AK+VD +S N SG+WS+W K +E+ + + E
Sbjct: 1398 ESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQ--------- 1448
Query: 236 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGE-ADWNKKDMQPLPDQAGLLN 412
S ++ WGK+ E+D G +VE + + QSG +K+G + W KK + G +
Sbjct: 1449 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKVE 1508
Query: 413 SSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKKDSQSLPNQDYPSSTGNWSKRSVEDSE 592
WG+K E D + WGKK E+A + S ++ S +W K+ +D
Sbjct: 1509 IDGGSSWGKKVEIDGGSSWGKKVEEA------ENHSHQSGKEEKSESLSSWGKKVEKDGV 1562
Query: 593 DAWGK 607
+WGK
Sbjct: 1563 SSWGK 1567
>ref|XP_018632612.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Nicotiana tomentosiformis]
Length = 2029
Score = 95.9 bits (237), Expect = 3e-19
Identities = 69/225 (30%), Positives = 98/225 (43%), Gaps = 24/225 (10%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQTQ 184
N QS E +SS K VE+D S W KKV+K D G+W + E Q
Sbjct: 1567 NHSHQSGKEEKSESLSSWGKKVEKDGVSSWGKKVEK-----DGGSWGKKVEQAEIHSQQS 1621
Query: 185 WNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKA---G 352
++ SE L WGK+ E+D G W K VE+ G WGKK G
Sbjct: 1622 GKEEKSESL------------SSWGKQVEKDGGSSWGKQVEKGGS------WGKKVEKDG 1663
Query: 353 EADWNKK---DMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK--D 517
+ W +K + P P G + S + WG++ ++D WG+K EK + W KK +
Sbjct: 1664 GSSWGEKVEAENTPRPSGKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKKVDE 1722
Query: 518 SQSLPNQ----DYPSSTGNWSKRSVED-----------SEDAWGK 607
+ P+Q + P S +W K+ +D SE +WGK
Sbjct: 1723 PEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQSNSESSWGK 1767
Score = 82.8 bits (203), Expect = 9e-15
Identities = 63/218 (28%), Positives = 93/218 (42%), Gaps = 41/218 (18%)
Frame = +2
Query: 77 DSASGW---AKKVD----KSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLI 235
+S S W AK+VD +S N SG+WS+W K +E+ + + E
Sbjct: 1440 ESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQ--------- 1490
Query: 236 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSG----------WGKKA---GEADWNKK- 373
S ++ WGK+ E+D G +VE + + QSG WGKK G + W KK
Sbjct: 1491 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEIDGGSSWGKKV 1550
Query: 374 -------------DMQPLPDQAGL-LNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNK 511
+ + Q+G S + WG+K E D + WGKK EK + W K
Sbjct: 1551 EIDGGSSWGKKVEEAENHSHQSGKEEKSESLSSWGKKVEKDGVSSWGKKVEKDGGS-WGK 1609
Query: 512 K------DSQSLPNQDYPSSTGNWSKRSVEDSEDAWGK 607
K SQ ++ S +W K+ +D +WGK
Sbjct: 1610 KVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWGK 1647
Score = 68.6 bits (166), Expect = 7e-10
Identities = 55/218 (25%), Positives = 90/218 (41%), Gaps = 32/218 (14%)
Frame = +2
Query: 50 SSTAKIVEEDSASGWAKKVDKSHN-----VEDSGAWSSWAKTGEESDQTQWNKKDSEPLP 214
S+ K E+ SG + + K+ N V S +WSSW + +E++ + E L
Sbjct: 1381 SAWEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENNPRQSGNGEQLE 1440
Query: 215 DQA-----VPLISSTVGGWGKRSEEDAGDGW-SKVERSGDKAQQSG----------WGKK 346
+ + S G ++ + W KV+ +G+ +QSG WGKK
Sbjct: 1441 SWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQSGSLSSWGKK 1500
Query: 347 AGE--ADWNKK--DMQPLPDQAGL-LNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNK 511
+ W K+ + + Q+G S + WG+K E D + WGKK E + W K
Sbjct: 1501 VEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEIDGGSSWGKKVEIDGGSSWGK 1560
Query: 512 K------DSQSLPNQDYPSSTGNWSKRSVEDSEDAWGK 607
K S ++ S +W K+ +D +WGK
Sbjct: 1561 KVEEAENHSHQSGKEEKSESLSSWGKKVEKDGVSSWGK 1598
>ref|XP_018632606.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Nicotiana tomentosiformis]
Length = 2040
Score = 95.9 bits (237), Expect = 3e-19
Identities = 69/225 (30%), Positives = 98/225 (43%), Gaps = 24/225 (10%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQTQ 184
N QS E +SS K VE+D S W KKV+K D G+W + E Q
Sbjct: 1578 NHSHQSGKEEKSESLSSWGKKVEKDGVSSWGKKVEK-----DGGSWGKKVEQAEIHSQQS 1632
Query: 185 WNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKA---G 352
++ SE L WGK+ E+D G W K VE+ G WGKK G
Sbjct: 1633 GKEEKSESL------------SSWGKQVEKDGGSSWGKQVEKGGS------WGKKVEKDG 1674
Query: 353 EADWNKK---DMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK--D 517
+ W +K + P P G + S + WG++ ++D WG+K EK + W KK +
Sbjct: 1675 GSSWGEKVEAENTPRPSGKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKKVDE 1733
Query: 518 SQSLPNQ----DYPSSTGNWSKRSVED-----------SEDAWGK 607
+ P+Q + P S +W K+ +D SE +WGK
Sbjct: 1734 PEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQSNSESSWGK 1778
Score = 85.5 bits (210), Expect = 1e-15
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Frame = +2
Query: 77 DSASGW---AKKVD----KSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLI 235
+S S W AK+VD +S N SG+WS+W K +E+ + + E
Sbjct: 1440 ESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQ--------- 1490
Query: 236 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGE-ADWNKKDMQPLPDQAGLLN 412
S ++ WGK+ E+D G +VE + + QSG +K+G + W KK + G +
Sbjct: 1491 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKVE 1550
Query: 413 SSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKKDSQSLPNQDYPSSTGNWSKRSVEDSE 592
WG+K E D + WGKK E+A + S ++ S +W K+ +D
Sbjct: 1551 IDGGSSWGKKVEIDGGSSWGKKVEEA------ENHSHQSGKEEKSESLSSWGKKVEKDGV 1604
Query: 593 DAWGK 607
+WGK
Sbjct: 1605 SSWGK 1609
>ref|XP_018632617.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X5
[Nicotiana tomentosiformis]
Length = 2002
Score = 95.5 bits (236), Expect = 4e-19
Identities = 74/263 (28%), Positives = 110/263 (41%), Gaps = 62/263 (23%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNV-------EDSGAWSSWAKTG 163
N QS E G +SS K VE+D S W K+V+++ N E SG+ SSW K
Sbjct: 1480 NSPRQSGNEEQSGSLSSWGKKVEKDGGS-WGKRVEETENHNHQSGKDEKSGSLSSWGKKV 1538
Query: 164 EESDQTQWNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSG--- 334
E+ + W K + + + V WGK+ E+D G KVE++ +QQSG
Sbjct: 1539 EKDGDSSWGKVEIDGGSSWGKKVEKDGVSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEE 1598
Query: 335 -----------------------------WGKKA---GEADWNKK---DMQPLPDQAGLL 409
WGKK G + W +K + P P G
Sbjct: 1599 KSESLSSWGKQVEKDGGSSWGKQVEKGGSWGKKVEKDGGSSWGEKVEAENTPRPSGKGEQ 1658
Query: 410 NSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK--DSQSLPNQ----DYPSSTGNWSK 571
+ S + WG++ ++D WG+K EK + W KK + + P+Q + P S +W K
Sbjct: 1659 SGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKKVDEPEDKPHQSGNGEQPGSWSSWGK 1717
Query: 572 RSVED-----------SEDAWGK 607
+ +D SE +WGK
Sbjct: 1718 KVEKDGGSWDGPKQSNSESSWGK 1740
Score = 90.1 bits (222), Expect = 3e-17
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 14/191 (7%)
Frame = +2
Query: 77 DSASGW---AKKVD----KSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLI 235
+S S W AK+VD +S N SG+WS+W K +E+ + + E
Sbjct: 1440 ESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQ--------- 1490
Query: 236 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGE-ADWNKKDMQPLPDQAGLLN 412
S ++ WGK+ E+D G +VE + + QSG +K+G + W KK + G +
Sbjct: 1491 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKVE 1550
Query: 413 SSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK------DSQSLPNQDYPSSTGNWSKR 574
WG+K E D + WGKK EK + W KK SQ ++ S +W K+
Sbjct: 1551 IDGGSSWGKKVEKDGVSSWGKKVEKDGGS-WGKKVEQAEIHSQQSGKEEKSESLSSWGKQ 1609
Query: 575 SVEDSEDAWGK 607
+D +WGK
Sbjct: 1610 VEKDGGSSWGK 1620
Score = 56.6 bits (135), Expect = 8e-06
Identities = 63/225 (28%), Positives = 87/225 (38%), Gaps = 31/225 (13%)
Frame = +2
Query: 8 KGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDK-------------------SHNVED 130
KG QS G SS K V+ED + W +KV+K S N E
Sbjct: 1655 KGEQS------GSWSSWGKQVKEDGGASWGEKVEKDGGSSWGKKVDEPEDKPHQSGNGEQ 1708
Query: 131 SGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERS 310
G+WSSW K E D W+ P S++ WGK ++ G G+
Sbjct: 1709 PGSWSSWGKK-VEKDGGSWDG-----------PKQSNSESSWGKTTK---GGGFGSAAAE 1753
Query: 311 GDKAQQ---SGWGKK-AGEADWNKKDMQPLPDQA---GLLNSSTAGFWGEK----SEDDS 457
G++ +GW +G+ N +P D A G NSST G W + E D
Sbjct: 1754 GNRRVDQLVNGWSSNISGDEQLN----EPTRDDATKVGGWNSSTVGGWNSQKVGVEESDK 1809
Query: 458 ANGWGKKAEKA-ADTRWNKKDSQSLPNQDYPSSTGNWSKRSVEDS 589
WG++ D R N + S ++ GN RS +DS
Sbjct: 1810 QPQWGQRRRNTRGDFRDNSRGWGSSSGGEW---KGNRPARSADDS 1851
>ref|XP_018632623.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X7
[Nicotiana tomentosiformis]
Length = 1991
Score = 94.7 bits (234), Expect = 7e-19
Identities = 71/228 (31%), Positives = 100/228 (43%), Gaps = 27/228 (11%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQTQ 184
N QS + G +SS K VE D S W KKV+K SSW K E+ D
Sbjct: 1517 NHNHQSGKDEKSGSLSSWGKKVEIDGGSSWGKKVEKD-------GVSSWGKKVEK-DGGS 1568
Query: 185 WNKKDSEP---LPDQAVPLISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKA- 349
W KK + S ++ WGK+ E+D G W K VE+ G WGKK
Sbjct: 1569 WGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWGKQVEKGGS------WGKKVE 1622
Query: 350 --GEADWNKK---DMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK 514
G + W +K + P P G + S + WG++ ++D WG+K EK + W KK
Sbjct: 1623 KDGGSSWGEKVEAENTPRPSGKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKK 1681
Query: 515 --DSQSLPNQ----DYPSSTGNWSKRSVED-----------SEDAWGK 607
+ + P+Q + P S +W K+ +D SE +WGK
Sbjct: 1682 VDEPEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQSNSESSWGK 1729
Score = 82.8 bits (203), Expect = 9e-15
Identities = 65/230 (28%), Positives = 96/230 (41%), Gaps = 31/230 (13%)
Frame = +2
Query: 11 GSQSMPERAGGLISSTAKIVEEDSASGWAKKVD-------KSHNVEDSGAWSSWAKTGEE 169
GS M + G + + + DS S W +KVD +S N E +WS+W +E
Sbjct: 1395 GSWDMAKTQNG---AEKAVNQSDSWSSWGRKVDEAENNPRQSGNGEQLESWSAWGGKAKE 1451
Query: 170 SDQ--------------TQWNKKDSEP--LPDQA-VPLISSTVGGWGKRSEEDAGDGWSK 298
D + W KK E P Q+ S ++ WGK+ E+D G +
Sbjct: 1452 VDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQSGSLSSWGKKVEKDGGSWGKR 1511
Query: 299 VERSGDKAQQSGWGKKAGE-ADWNKKDMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGK 475
VE + + QSG +K+G + W KK + WG+K E D + WGK
Sbjct: 1512 VEETENHNHQSGKDEKSGSLSSWGKK-----------VEIDGGSSWGKKVEKDGVSSWGK 1560
Query: 476 KAEKAADTRWNKK------DSQSLPNQDYPSSTGNWSKRSVEDSEDAWGK 607
K EK + W KK SQ ++ S +W K+ +D +WGK
Sbjct: 1561 KVEKDGGS-WGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWGK 1609
>ref|XP_018632616.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X4
[Nicotiana tomentosiformis]
Length = 2003
Score = 93.6 bits (231), Expect = 2e-18
Identities = 73/234 (31%), Positives = 102/234 (43%), Gaps = 33/234 (14%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKS------HNVEDSGAWSSWAKTGE 166
N QS + G +SS K VE D S W KKV+ VE G SSW K E
Sbjct: 1517 NHNHQSGKDEKSGSLSSWGKKVEIDGGSSWGKKVEIDGGSSWGKKVEKDGV-SSWGKKVE 1575
Query: 167 ESDQTQWNKKDSEP---LPDQAVPLISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSG 334
+ D W KK + S ++ WGK+ E+D G W K VE+ G
Sbjct: 1576 K-DGGSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWGKQVEKGGS------ 1628
Query: 335 WGKKA---GEADWNKK---DMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAAD 496
WGKK G + W +K + P P G + S + WG++ ++D WG+K EK
Sbjct: 1629 WGKKVEKDGGSSWGEKVEAENTPRPSGKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGG 1687
Query: 497 TRWNKK--DSQSLPNQ----DYPSSTGNWSKRSVED-----------SEDAWGK 607
+ W KK + + P+Q + P S +W K+ +D SE +WGK
Sbjct: 1688 SSWGKKVDEPEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQSNSESSWGK 1741
Score = 83.6 bits (205), Expect = 5e-15
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 25/202 (12%)
Frame = +2
Query: 77 DSASGW---AKKVD----KSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLI 235
+S S W AK+VD +S N SG+WS+W K +E+ + + E
Sbjct: 1440 ESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQ--------- 1490
Query: 236 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGE-ADWNKKDMQPLPDQAGLLN 412
S ++ WGK+ E+D G +VE + + QSG +K+G + W KK +
Sbjct: 1491 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKK-----------VE 1539
Query: 413 SSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK-----------------DSQSLPNQD 541
WG+K E D + WGKK EK + W KK SQ ++
Sbjct: 1540 IDGGSSWGKKVEIDGGSSWGKKVEKDGVSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEE 1599
Query: 542 YPSSTGNWSKRSVEDSEDAWGK 607
S +W K+ +D +WGK
Sbjct: 1600 KSESLSSWGKQVEKDGGSSWGK 1621
>ref|XP_015056787.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Solanum
pennellii]
ref|XP_015056795.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Solanum
pennellii]
Length = 2044
Score = 93.2 bits (230), Expect = 2e-18
Identities = 69/214 (32%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Frame = +2
Query: 29 ERAGGLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEP 208
E GG SS K E D S W KK + D G SSW K GE + W KK +E
Sbjct: 1411 EMDGG--SSWGKKAETDGGSSWGKKGET-----DGG--SSWGKKGETDGGSSWGKK-AEM 1460
Query: 209 LPDQAVPLISSTVGG--WGKRSEEDAGDGWSKVERSGDKAQQSGWGKKA---GEADWNKK 373
+ + T GG WGK++E DAG W K G+ S WGKK G + W +K
Sbjct: 1461 DGGSSWGKKAETDGGSSWGKKAETDAGSSWGK---KGETDGGSSWGKKGETDGGSSWGEK 1517
Query: 374 DMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK------------D 517
P+ G WG+K+E D + WGKK +K + W KK +
Sbjct: 1518 -----PETDG------GSSWGKKAETDGGSSWGKKVDKDGGSSWGKKVDKDGASWGKKVE 1566
Query: 518 SQSLP----NQDYPSSTGNWSKRSVEDSEDAWGK 607
S++ P ++ S +W K+ +D +WGK
Sbjct: 1567 SENFPQLSGKEEQSGSWSSWGKQVEKDGGSSWGK 1600
Score = 92.4 bits (228), Expect = 4e-18
Identities = 67/220 (30%), Positives = 85/220 (38%), Gaps = 18/220 (8%)
Frame = +2
Query: 2 WNKGSQSMPERAGG--LISSTAKIVEE-----DSASGWAKKVDKSHNVEDSGAWS---SW 151
W K S + G + T EE DS S W KKVD S N + SG SW
Sbjct: 1324 WEKASSGSVKSGGSWDMAGKTQNGAEEGVNQSDSWSAWGKKVDGS-NPQQSGVTEQSESW 1382
Query: 152 AKTGEESDQTQWNKKDSEPLPDQAVPLISSTVGG-WGKRSEEDAGDGWSKVERSGDKAQQ 328
K GE + W KK + G WGK++E D G W K G+
Sbjct: 1383 GKKGETDGGSSWGKKGETDVGSSWGKKAEMDGGSSWGKKAETDGGSSWGK---KGETDGG 1439
Query: 329 SGWGKKA---GEADWNKKDMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADT 499
S WGKK G + W KK WG+K+E D + WGKKAE A +
Sbjct: 1440 SSWGKKGETDGGSSWGKK-----------AEMDGGSSWGKKAETDGGSSWGKKAETDAGS 1488
Query: 500 RWNKK----DSQSLPNQDYPSSTGNWSKRSVEDSEDAWGK 607
W KK S + +W ++ D +WGK
Sbjct: 1489 SWGKKGETDGGSSWGKKGETDGGSSWGEKPETDGGSSWGK 1528
Score = 92.0 bits (227), Expect = 6e-18
Identities = 68/218 (31%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Frame = +2
Query: 29 ERAGGLISSTAKIVEEDSASGWAKKVDK-----------------SHNVEDSGAWSSWAK 157
E GG SS K V++D S W KKVDK S E SG+WSSW K
Sbjct: 1531 ETDGG--SSWGKKVDKDGGSSWGKKVDKDGASWGKKVESENFPQLSGKEEQSGSWSSWGK 1588
Query: 158 TGEESDQTQWNKKDSEP---LPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQ 328
E+ + W KK EP L S V WGK E+D G K+E + Q
Sbjct: 1589 QVEKDGGSSWGKKVDEPEKNLHQSGNGEQSGFVSSWGK-VEKDGGSWGKKIE-----SHQ 1642
Query: 329 SGWGKKAGE-ADWNKKDMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRW 505
SG G+++G + W KK + + WG+K + DS++ WGKK +K +
Sbjct: 1643 SGKGEESGSLSSWGKK-----------VETDGGSSWGKKVDKDSSS-WGKKVDKDGGSWG 1690
Query: 506 NKKDSQSLP----NQDYPSSTGNWSKRSVEDSEDAWGK 607
K ++++ P ++ S +W K+ +D +WGK
Sbjct: 1691 KKIETENTPQLSGKEEQSGSLSSWGKKVEKDGGSSWGK 1728
Score = 71.6 bits (174), Expect = 6e-11
Identities = 57/204 (27%), Positives = 83/204 (40%), Gaps = 7/204 (3%)
Frame = +2
Query: 17 QSMPERAGGLISSTAKIVEEDSASGWAKKVD--KSHNVEDSGAWSSWAKTGEESDQTQWN 190
QS G +SS K VE+D S W KK++ +S E+SG+ SSW K E + W
Sbjct: 1611 QSGNGEQSGFVSSWGK-VEKDGGS-WGKKIESHQSGKGEESGSLSSWGKKVETDGGSSWG 1668
Query: 191 KKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGEADWNK 370
KK + WGK+ ++D G WGKK N
Sbjct: 1669 KK------------VDKDSSSWGKKVDKDGG----------------SWGKKIETE--NT 1698
Query: 371 KDMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADT-----RWNKKDSQSLPN 535
+ +Q+G L+S WG+K E D + WGKK ++ + + S S
Sbjct: 1699 PQLSGKEEQSGSLSS-----WGKKVEKDGGSSWGKKVDEPENNTQQSGSGEQSGSWSSWG 1753
Query: 536 QDYPSSTGNWSKRSVEDSEDAWGK 607
+ G+W +SE +WGK
Sbjct: 1754 KKVEKDGGSWDGPKQSNSESSWGK 1777
Score = 63.2 bits (152), Expect = 5e-08
Identities = 59/210 (28%), Positives = 81/210 (38%), Gaps = 15/210 (7%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHN-------VEDSGAWSSWAKTG 163
N S E G +SS K VE+D S W KKVD+ N E SG+WSSW K
Sbjct: 1697 NTPQLSGKEEQSGSLSSWGKKVEKDGGSSWGKKVDEPENNTQQSGSGEQSGSWSSWGKK- 1755
Query: 164 EESDQTQWNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGK 343
E D W+ P S++ WGK G G G+K
Sbjct: 1756 VEKDGGSWDG-----------PKQSNSESSWGKAPN---GGGLGSATAEGNKRLDQSVND 1801
Query: 344 KAGEADWNKKDMQPLPDQA---GLLNSSTAGFWGEK----SEDDSANGWGKKAEKA-ADT 499
+ + + +P D + G NSST G W + E D WG++ A D
Sbjct: 1802 WSSSVSRDGQLNEPTHDDSTKNGGWNSSTVGGWNSQKVGVEESDKTPQWGQRRRNAKGDF 1861
Query: 500 RWNKKDSQSLPNQDYPSSTGNWSKRSVEDS 589
+ N + S ++ + N RS +DS
Sbjct: 1862 KENSRGWGSASGGEWKN---NRPARSADDS 1888
>ref|XP_018632614.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X3
[Nicotiana tomentosiformis]
Length = 2014
Score = 91.7 bits (226), Expect = 8e-18
Identities = 65/210 (30%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Frame = +2
Query: 50 SSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVP 229
SS K VE+D S W KKV+K D G+W + E Q ++ SE L
Sbjct: 1567 SSWGKKVEKDGVSSWGKKVEK-----DGGSWGKKVEQAEIHSQQSGKEEKSESL------ 1615
Query: 230 LISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKA---GEADWNKK---DMQPL 388
WGK+ E+D G W K VE+ G WGKK G + W +K + P
Sbjct: 1616 ------SSWGKQVEKDGGSSWGKQVEKGGS------WGKKVEKDGGSSWGEKVEAENTPR 1663
Query: 389 PDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK--DSQSLPNQ----DYPS 550
P G + S + WG++ ++D WG+K EK + W KK + + P+Q + P
Sbjct: 1664 PSGKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKKVDEPEDKPHQSGNGEQPG 1722
Query: 551 STGNWSKRSVED-----------SEDAWGK 607
S +W K+ +D SE +WGK
Sbjct: 1723 SWSSWGKKVEKDGGSWDGPKQSNSESSWGK 1752
Score = 88.6 bits (218), Expect = 9e-17
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Frame = +2
Query: 77 DSASGW---AKKVD----KSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLI 235
+S S W AK+VD +S N SG+WS+W K +E+ + + E
Sbjct: 1440 ESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQ--------- 1490
Query: 236 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGE-ADWNKKDMQPLPDQAGLLN 412
S ++ WGK+ E+D G +VE + + QSG +K+G + W KK + G +
Sbjct: 1491 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKVE 1550
Query: 413 SSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK-----------------DSQSLPNQD 541
WG+K E D + WGKK EK + W KK SQ ++
Sbjct: 1551 IDGGSSWGKKVEIDGGSSWGKKVEKDGVSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEE 1610
Query: 542 YPSSTGNWSKRSVEDSEDAWGK 607
S +W K+ +D +WGK
Sbjct: 1611 KSESLSSWGKQVEKDGGSSWGK 1632
>ref|XP_019066486.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Solanum
lycopersicum]
ref|XP_019066488.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Solanum
lycopersicum]
Length = 1984
Score = 90.1 bits (222), Expect = 3e-17
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Frame = +2
Query: 29 ERAGGLISSTAKIVEEDSASGWAKKVDK------SHNVEDSGAWSSWAKTGEESDQTQWN 190
++ GG SS K V++D AS W KKV+ S E SG+WSSW K E+ + W
Sbjct: 1483 DKDGG--SSLGKKVDKDGAS-WGKKVESENFPQLSGKEEQSGSWSSWGKQVEKDGGSSWG 1539
Query: 191 KKDSEP---LPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGE-A 358
KK EP L S V WGK E+D G K+E + QSG G+++G +
Sbjct: 1540 KKVDEPEKNLHQSGNGEQSGFVSSWGK-VEKDGGSWGKKIE-----SHQSGKGEESGSLS 1593
Query: 359 DWNKKDMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKKDSQSLP-- 532
W KK + + WG+K + DS++ WGKK +K + K ++++ P
Sbjct: 1594 SWGKK-----------VETDGGSSWGKKVDKDSSS-WGKKVDKDGGSWGKKIETENTPQL 1641
Query: 533 --NQDYPSSTGNWSKRSVEDSEDAWGK 607
++ S +W K+ +D +WGK
Sbjct: 1642 SGKEEQSGSLSSWGKKVEKDGGSSWGK 1668
Score = 87.4 bits (215), Expect = 2e-16
Identities = 69/230 (30%), Positives = 95/230 (41%), Gaps = 28/230 (12%)
Frame = +2
Query: 2 WNKGSQSMPERAGG--LISSTAKIVEE-----DSASGWAKKVDKSHNVEDSGAWS---SW 151
W K S + G + T EE DS S W KKVD S N + SG SW
Sbjct: 1324 WEKASSGSVKSGGSWDMAGKTQNGAEEGVNQSDSWSAWGKKVDGS-NTQQSGVTEQSESW 1382
Query: 152 AKTGEESDQTQWNKKDSEPLPDQAVPLISSTVGG--WGKRSEEDAGDGWSKVERS----- 310
K GE + W KK E + + T GG WGK+ E D G W K +
Sbjct: 1383 GKKGETDGGSSWGKK-GETDGGSSWGKKAETDGGSSWGKKGETDGGSSWGKKGETDGGSS 1441
Query: 311 -GDKAQQSG---WGKKA---GEADWNKKDMQPLPDQAGLLNSSTAGFWGEKSEDDSANGW 469
G+K + G WGKKA G + W KK + WG+K + D +
Sbjct: 1442 WGEKPETDGGSSWGKKAETDGGSSWGKK-----------AETDGGSSWGKKVDKDGGSSL 1490
Query: 470 GKKAEKAADTRWNKKDSQSLP----NQDYPSSTGNWSKRSVEDSEDAWGK 607
GKK +K + K +S++ P ++ S +W K+ +D +WGK
Sbjct: 1491 GKKVDKDGASWGKKVESENFPQLSGKEEQSGSWSSWGKQVEKDGGSSWGK 1540
Score = 76.3 bits (186), Expect = 2e-12
Identities = 66/236 (27%), Positives = 94/236 (39%), Gaps = 34/236 (14%)
Frame = +2
Query: 2 WNKGSQSMPERAG---GLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWS--------S 148
W K +S G G +SS K VE D S W KKVDK DS +W S
Sbjct: 1574 WGKKIESHQSGKGEESGSLSSWGKKVETDGGSSWGKKVDK-----DSSSWGKKVDKDGGS 1628
Query: 149 WAKTGEESDQTQWNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQ 325
W K E + Q + K+ + S ++ WGK+ E+D G W K V+ + Q
Sbjct: 1629 WGKKIETENTPQLSGKEEQ----------SGSLSSWGKKVEKDGGSSWGKKVDEPENNRQ 1678
Query: 326 QSGWGKKAGE-ADWNKK---------DMQPLPDQA--------GLLNSSTAGFWGEKSED 451
QSG G+++G + W KK + + L ++ G L S+TA G K D
Sbjct: 1679 QSGSGEQSGSWSSWGKKVEKDGGSWDEPKQLNSESSWGKAPNGGGLGSATAE--GNKRLD 1736
Query: 452 DSANGWGKKAEKAADTRWNKKDSQSLPNQDYPSSTGNWSKRSV----EDSEDAWGK 607
S N W + D + S+ G W+ + V D WG+
Sbjct: 1737 QSVNDWSSSVSRDGQLNEPTHDDSTKNGGWNSSNVGGWNSQKVGVEESDKTPQWGQ 1792
Score = 73.9 bits (180), Expect = 1e-11
Identities = 58/204 (28%), Positives = 85/204 (41%), Gaps = 7/204 (3%)
Frame = +2
Query: 17 QSMPERAGGLISSTAKIVEEDSASGWAKKVD--KSHNVEDSGAWSSWAKTGEESDQTQWN 190
QS G +SS K VE+D S W KK++ +S E+SG+ SSW K E + W
Sbjct: 1551 QSGNGEQSGFVSSWGK-VEKDGGS-WGKKIESHQSGKGEESGSLSSWGKKVETDGGSSWG 1608
Query: 191 KKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGEADWNK 370
KK + WGK+ ++D G WGKK N
Sbjct: 1609 KK------------VDKDSSSWGKKVDKDGG----------------SWGKKIETE--NT 1638
Query: 371 KDMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTR-----WNKKDSQSLPN 535
+ +Q+G L+S WG+K E D + WGKK ++ + R + S S
Sbjct: 1639 PQLSGKEEQSGSLSS-----WGKKVEKDGGSSWGKKVDEPENNRQQSGSGEQSGSWSSWG 1693
Query: 536 QDYPSSTGNWSKRSVEDSEDAWGK 607
+ G+W + +SE +WGK
Sbjct: 1694 KKVEKDGGSWDEPKQLNSESSWGK 1717
Score = 62.8 bits (151), Expect = 7e-08
Identities = 52/182 (28%), Positives = 72/182 (39%), Gaps = 26/182 (14%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHN-------VEDSGAWSSWAKT- 160
N S E G +SS K VE+D S W KKVD+ N E SG+WSSW K
Sbjct: 1637 NTPQLSGKEEQSGSLSSWGKKVEKDGGSSWGKKVDEPENNRQQSGSGEQSGSWSSWGKKV 1696
Query: 161 ----GEESDQTQWNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSG----- 313
G + Q N + S L S+T G KR ++ D S V R G
Sbjct: 1697 EKDGGSWDEPKQLNSESSWGKAPNGGGLGSATAEG-NKRLDQSVNDWSSSVSRDGQLNEP 1755
Query: 314 ---DKAQQSGWGKKAGEADWNKKDMQPLPDQAGLLNSSTAGFWGEKSED------DSANG 466
D + GW + WN + + G+ S WG++ + +++ G
Sbjct: 1756 THDDSTKNGGW-NSSNVGGWNSQ-------KVGVEESDKTPQWGQRRRNAKGDFKENSRG 1807
Query: 467 WG 472
WG
Sbjct: 1808 WG 1809
>ref|XP_019225779.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Nicotiana attenuata]
Length = 1983
Score = 89.0 bits (219), Expect = 7e-17
Identities = 70/239 (29%), Positives = 98/239 (41%), Gaps = 53/239 (22%)
Frame = +2
Query: 50 SSTAKIVEEDSASGWAKKVDKSHN-------VEDSGAWSSWAKTGEESDQTQWNKKDSEP 208
SS K VE D S W KKV+++ N E S + SSW K E + + W KK
Sbjct: 1500 SSWGKKVEIDGGSSWGKKVEEAENHSHRSGKEEKSESLSSWGKKVENNGVSSWGKK---- 1555
Query: 209 LPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSG----------WGKKAG-E 355
+ + V WGK+ E+D G KVE++ + QSG WGKK +
Sbjct: 1556 -------VENDGVSSWGKKVEKDGGSWGKKVEQAEIHSHQSGKEEKSESLSSWGKKVEKD 1608
Query: 356 ADWNKK---------------DMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKA 490
W KK + P P G + S + WG++ ++D WGKK EK
Sbjct: 1609 GSWGKKVEKDGGSSWGGKVEAENTPRPSGKGEQSGSWSS-WGKQVKEDGGASWGKKVEKD 1667
Query: 491 ADTRWNKKDSQSLPNQDYPSSTGN---------WSKRSVED-----------SEDAWGK 607
+ W KK + +D P +GN W K+ +D SE +WGK
Sbjct: 1668 GGSSWGKKVDEP---EDKPHQSGNGEQSGSWSSWGKKVEKDGGSWGGPKQSNSESSWGK 1723
Score = 87.8 bits (216), Expect = 2e-16
Identities = 66/220 (30%), Positives = 98/220 (44%), Gaps = 19/220 (8%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAW---------SSWAK 157
N QS + G +SS K VE+D S W KKV+ ++ +W SSW K
Sbjct: 1461 NHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKKVE----IDGGSSWGKKVEIDGGSSWGK 1516
Query: 158 TGEESDQ---TQWNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQ 325
EE++ ++ SE L + ++ V WGK+ E D W K VE+ G
Sbjct: 1517 KVEEAENHSHRSGKEEKSESLSSWGKKVENNGVSSWGKKVENDGVSSWGKKVEKDG---- 1572
Query: 326 QSGWGKKAGEADWNKKDMQPLPDQAGLLNSSTA-GFWGEKSEDDSANGWGKKAEKAADTR 502
WGKK +A+ + Q+G S + WG+K E D + WGKK EK +
Sbjct: 1573 -GSWGKKVEQAEIHSH-------QSGKEEKSESLSSWGKKVEKDGS--WGKKVEKDGGSS 1622
Query: 503 WNKK-DSQSLPNQ----DYPSSTGNWSKRSVEDSEDAWGK 607
W K ++++ P + S +W K+ ED +WGK
Sbjct: 1623 WGGKVEAENTPRPSGKGEQSGSWSSWGKQVKEDGGASWGK 1662
Score = 79.3 bits (194), Expect = 1e-13
Identities = 69/234 (29%), Positives = 96/234 (41%), Gaps = 34/234 (14%)
Frame = +2
Query: 8 KGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDK-------SHNVEDSGAWSSWAKTGE 166
K S P+++G S S S W KKVD+ S N E SG+ SSW K E
Sbjct: 1394 KEVDSNPQQSGNTAQS-------GSWSAWGKKVDETGNSPRQSGNEEQSGSLSSWGKKVE 1446
Query: 167 ESDQTQWNKKDSEPLP---DQAVPLISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSG 334
+ D W KK E S ++ WGK+ E+D W K VE G S
Sbjct: 1447 K-DGGSWGKKVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKKVEIDGG----SS 1501
Query: 335 WGKKA---GEADWNKK--DMQPLPDQAGLLNSSTA-GFWGEKSEDDSANGWGKKAEKAAD 496
WGKK G + W KK + + ++G S + WG+K E++ + WGKK E
Sbjct: 1502 WGKKVEIDGGSSWGKKVEEAENHSHRSGKEEKSESLSSWGKKVENNGVSSWGKKVENDGV 1561
Query: 497 TRWNKK-----------------DSQSLPNQDYPSSTGNWSKRSVEDSEDAWGK 607
+ W KK S ++ S +W K+ +D +WGK
Sbjct: 1562 SSWGKKVEKDGGSWGKKVEQAEIHSHQSGKEEKSESLSSWGKKVEKDG--SWGK 1613
Score = 77.0 bits (188), Expect = 9e-13
Identities = 64/208 (30%), Positives = 90/208 (43%), Gaps = 8/208 (3%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQTQ 184
N +S E +SS K VE + S W KK VE+ G SSW K E D
Sbjct: 1523 NHSHRSGKEEKSESLSSWGKKVENNGVSSWGKK------VENDGV-SSWGKK-VEKDGGS 1574
Query: 185 WNKKDSEP---LPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGE 355
W KK + S ++ WGK+ E+D G KVE+ G S WG K
Sbjct: 1575 WGKKVEQAEIHSHQSGKEEKSESLSSWGKKVEKD-GSWGKKVEKDGG----SSWGGKV-- 1627
Query: 356 ADWNKKDMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKK--DSQSL 529
+ + P P G + S + WG++ ++D WGKK EK + W KK + +
Sbjct: 1628 ----EAENTPRPSGKGEQSGSWSS-WGKQVKEDGGASWGKKVEKDGGSSWGKKVDEPEDK 1682
Query: 530 PNQD-YPSSTGNWSK--RSVEDSEDAWG 604
P+Q +G+WS + VE +WG
Sbjct: 1683 PHQSGNGEQSGSWSSWGKKVEKDGGSWG 1710
Score = 70.9 bits (172), Expect = 1e-10
Identities = 54/202 (26%), Positives = 81/202 (40%), Gaps = 25/202 (12%)
Frame = +2
Query: 77 DSASGW---AKKVD----KSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLI 235
+S S W AK+VD +S N SG+WS+W K +E+ + + E
Sbjct: 1384 ESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDETGNSPRQSGNEEQ--------- 1434
Query: 236 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGEADWNKKDMQPLPDQAGLLNS 415
S ++ WGK+ E+D G KVE + + QSG +K+G L+S
Sbjct: 1435 SGSLSSWGKKVEKDGGSWGKKVEETENHNHQSGKDEKSGS-----------------LSS 1477
Query: 416 STAGFWGEKSEDDSANGWGKKAEKAADTRWNKK------------------DSQSLPNQD 541
WG+K E D + WGKK E + W KK S ++
Sbjct: 1478 -----WGKKVEKDGDSSWGKKVEIDGGSSWGKKVEIDGGSSWGKKVEEAENHSHRSGKEE 1532
Query: 542 YPSSTGNWSKRSVEDSEDAWGK 607
S +W K+ + +WGK
Sbjct: 1533 KSESLSSWGKKVENNGVSSWGK 1554
Score = 65.5 bits (158), Expect = 8e-09
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 9/195 (4%)
Frame = +2
Query: 50 SSTAKIVEEDSASGWAKKVDKSHN-----VEDSGAWSSWAKTGEESDQTQWNKKDSEPLP 214
S+ K E+ SG + + K+ N V S +WSSW + +E++ + E L
Sbjct: 1325 SAWEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENNPRESGNGEQL- 1383
Query: 215 DQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQ---SGWGKKAGEADWNKKDMQP 385
+ WG +++E S ++SG+ AQ S WGKK E N
Sbjct: 1384 --------ESWSAWGGKAKEVD----SNPQQSGNTAQSGSWSAWGKKVDETG-NSPRQSG 1430
Query: 386 LPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAAD-TRWNKKDSQSLPNQDYPSSTGN 562
+Q+G L+S WG+K E D + WGKK E+ + + KD +S S +
Sbjct: 1431 NEEQSGSLSS-----WGKKVEKDGGS-WGKKVEETENHNHQSGKDEKS-------GSLSS 1477
Query: 563 WSKRSVEDSEDAWGK 607
W K+ +D + +WGK
Sbjct: 1478 WGKKVEKDGDSSWGK 1492
Score = 65.1 bits (157), Expect = 1e-08
Identities = 63/215 (29%), Positives = 88/215 (40%), Gaps = 19/215 (8%)
Frame = +2
Query: 2 WNKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDK-------SHNVEDSGAWSSWAKT 160
W+ + + E G +S K VE+D S W KKVD+ S N E SG+WSSW K
Sbjct: 1645 WSSWGKQVKEDGG---ASWGKKVEKDGGSSWGKKVDEPEDKPHQSGNGEQSGSWSSWGKK 1701
Query: 161 GEESDQTQWNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQ---S 331
E D W P S++ WGK ++ G G+ G++ +
Sbjct: 1702 -VEKDGGSWGG-----------PKQSNSESSWGKTTK---GGGFGSAAAEGNRRVDQLVN 1746
Query: 332 GWGKK-AGEADWNKKDMQPLPDQA---GLLNSSTAGFWGEK----SEDDSANGWG-KKAE 484
GW +G+ N +P D A G NSST G W + E D WG ++
Sbjct: 1747 GWSSSISGDEQLN----EPTSDDATKVGGWNSSTVGGWNSQKVGVEESDKQPQWGQRRRN 1802
Query: 485 KAADTRWNKKDSQSLPNQDYPSSTGNWSKRSVEDS 589
D R N + S ++ GN RS +DS
Sbjct: 1803 PRGDFRDNSRGWGSSSGGEW---KGNRPARSADDS 1834
>ref|XP_019225778.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Nicotiana attenuata]
gb|OIT32449.1| dna-directed rna polymerase v subunit 1 [Nicotiana attenuata]
Length = 2036
Score = 89.0 bits (219), Expect = 7e-17
Identities = 70/239 (29%), Positives = 98/239 (41%), Gaps = 53/239 (22%)
Frame = +2
Query: 50 SSTAKIVEEDSASGWAKKVDKSHN-------VEDSGAWSSWAKTGEESDQTQWNKKDSEP 208
SS K VE D S W KKV+++ N E S + SSW K E + + W KK
Sbjct: 1553 SSWGKKVEIDGGSSWGKKVEEAENHSHRSGKEEKSESLSSWGKKVENNGVSSWGKK---- 1608
Query: 209 LPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSG----------WGKKAG-E 355
+ + V WGK+ E+D G KVE++ + QSG WGKK +
Sbjct: 1609 -------VENDGVSSWGKKVEKDGGSWGKKVEQAEIHSHQSGKEEKSESLSSWGKKVEKD 1661
Query: 356 ADWNKK---------------DMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKA 490
W KK + P P G + S + WG++ ++D WGKK EK
Sbjct: 1662 GSWGKKVEKDGGSSWGGKVEAENTPRPSGKGEQSGSWSS-WGKQVKEDGGASWGKKVEKD 1720
Query: 491 ADTRWNKKDSQSLPNQDYPSSTGN---------WSKRSVED-----------SEDAWGK 607
+ W KK + +D P +GN W K+ +D SE +WGK
Sbjct: 1721 GGSSWGKKVDEP---EDKPHQSGNGEQSGSWSSWGKKVEKDGGSWGGPKQSNSESSWGK 1776
Score = 87.8 bits (216), Expect = 2e-16
Identities = 66/220 (30%), Positives = 98/220 (44%), Gaps = 19/220 (8%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAW---------SSWAK 157
N QS + G +SS K VE+D S W KKV+ ++ +W SSW K
Sbjct: 1514 NHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKKVE----IDGGSSWGKKVEIDGGSSWGK 1569
Query: 158 TGEESDQ---TQWNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSK-VERSGDKAQ 325
EE++ ++ SE L + ++ V WGK+ E D W K VE+ G
Sbjct: 1570 KVEEAENHSHRSGKEEKSESLSSWGKKVENNGVSSWGKKVENDGVSSWGKKVEKDG---- 1625
Query: 326 QSGWGKKAGEADWNKKDMQPLPDQAGLLNSSTA-GFWGEKSEDDSANGWGKKAEKAADTR 502
WGKK +A+ + Q+G S + WG+K E D + WGKK EK +
Sbjct: 1626 -GSWGKKVEQAEIHSH-------QSGKEEKSESLSSWGKKVEKDGS--WGKKVEKDGGSS 1675
Query: 503 WNKK-DSQSLPNQ----DYPSSTGNWSKRSVEDSEDAWGK 607
W K ++++ P + S +W K+ ED +WGK
Sbjct: 1676 WGGKVEAENTPRPSGKGEQSGSWSSWGKQVKEDGGASWGK 1715
Score = 84.0 bits (206), Expect = 4e-15
Identities = 75/250 (30%), Positives = 101/250 (40%), Gaps = 49/250 (19%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEED---------------SASGWAKKVDK-------SH 118
N QS E G +SS K VE+D S S W KKVD+ S
Sbjct: 1424 NSPRQSGNEEQSGSLSSWGKKVEKDGGSWGKQSGNTAQSGSWSAWGKKVDEAGNSPRQSG 1483
Query: 119 NVEDSGAWSSWAKTGEESDQTQWNKKDSEPLP---DQAVPLISSTVGGWGKRSEEDAGDG 289
N E SG+ SSW K E+ D W KK E S ++ WGK+ E+D
Sbjct: 1484 NEEQSGSLSSWGKKVEK-DGGSWGKKVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSS 1542
Query: 290 WSK-VERSGDKAQQSGWGKKA---GEADWNKK--DMQPLPDQAGLLNSSTA-GFWGEKSE 448
W K VE G S WGKK G + W KK + + ++G S + WG+K E
Sbjct: 1543 WGKKVEIDGG----SSWGKKVEIDGGSSWGKKVEEAENHSHRSGKEEKSESLSSWGKKVE 1598
Query: 449 DDSANGWGKKAEKAADTRWNKK-----------------DSQSLPNQDYPSSTGNWSKRS 577
++ + WGKK E + W KK S ++ S +W K+
Sbjct: 1599 NNGVSSWGKKVENDGVSSWGKKVEKDGGSWGKKVEQAEIHSHQSGKEEKSESLSSWGKKV 1658
Query: 578 VEDSEDAWGK 607
+D +WGK
Sbjct: 1659 EKDG--SWGK 1666
Score = 81.6 bits (200), Expect = 2e-14
Identities = 62/188 (32%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Frame = +2
Query: 77 DSASGW---AKKVD----KSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLI 235
+S S W AK+VD +S N SG+WS+W K +E+ + + E
Sbjct: 1384 ESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDETGNSPRQSGNEEQ--------- 1434
Query: 236 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQ---SGWGKKAGEADWNKKDMQPLPDQAGL 406
S ++ WGK+ E+D G W K +SG+ AQ S WGKK EA N +Q+G
Sbjct: 1435 SGSLSSWGKKVEKDGG-SWGK--QSGNTAQSGSWSAWGKKVDEAG-NSPRQSGNEEQSGS 1490
Query: 407 LNSSTAGFWGEKSEDDSANGWGKKAEKAAD-TRWNKKDSQSLPNQDYPSSTGNWSKRSVE 583
L+S WG+K E D + WGKK E+ + + KD +S S +W K+ +
Sbjct: 1491 LSS-----WGKKVEKDGGS-WGKKVEETENHNHQSGKDEKS-------GSLSSWGKKVEK 1537
Query: 584 DSEDAWGK 607
D + +WGK
Sbjct: 1538 DGDSSWGK 1545
Score = 81.6 bits (200), Expect = 2e-14
Identities = 66/232 (28%), Positives = 93/232 (40%), Gaps = 32/232 (13%)
Frame = +2
Query: 8 KGSQSMPERAGGLISSTAKIVEEDSASGWAKKVD-------KSHNVEDSGAWSSWAK--- 157
K S P+++G S S S W KKVD +S N E SG+ SSW K
Sbjct: 1394 KEVDSNPQQSGNTAQS-------GSWSAWGKKVDETGNSPRQSGNEEQSGSLSSWGKKVE 1446
Query: 158 ------------TGEESDQTQWNKKDSEP--LPDQA-VPLISSTVGGWGKRSEEDAGDGW 292
T + + W KK E P Q+ S ++ WGK+ E+D G
Sbjct: 1447 KDGGSWGKQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQSGSLSSWGKKVEKDGGSWG 1506
Query: 293 SKVERSGDKAQQSGWGKKAGE-ADWNKKDMQPLPDQAGLLNSSTAGFWGEKSEDDSANGW 469
KVE + + QSG +K+G + W KK + WG+K E D + W
Sbjct: 1507 KKVEETENHNHQSGKDEKSGSLSSWGKK-----------VEKDGDSSWGKKVEIDGGSSW 1555
Query: 470 GKKAEKAADTRWNKK------DSQSLPNQDYPSSTGNWSKRSVEDSEDAWGK 607
GKK E + W KK S ++ S +W K+ + +WGK
Sbjct: 1556 GKKVEIDGGSSWGKKVEEAENHSHRSGKEEKSESLSSWGKKVENNGVSSWGK 1607
Score = 65.1 bits (157), Expect = 1e-08
Identities = 63/215 (29%), Positives = 88/215 (40%), Gaps = 19/215 (8%)
Frame = +2
Query: 2 WNKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDK-------SHNVEDSGAWSSWAKT 160
W+ + + E G +S K VE+D S W KKVD+ S N E SG+WSSW K
Sbjct: 1698 WSSWGKQVKEDGG---ASWGKKVEKDGGSSWGKKVDEPEDKPHQSGNGEQSGSWSSWGKK 1754
Query: 161 GEESDQTQWNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQ---S 331
E D W P S++ WGK ++ G G+ G++ +
Sbjct: 1755 -VEKDGGSWGG-----------PKQSNSESSWGKTTK---GGGFGSAAAEGNRRVDQLVN 1799
Query: 332 GWGKK-AGEADWNKKDMQPLPDQA---GLLNSSTAGFWGEK----SEDDSANGWG-KKAE 484
GW +G+ N +P D A G NSST G W + E D WG ++
Sbjct: 1800 GWSSSISGDEQLN----EPTSDDATKVGGWNSSTVGGWNSQKVGVEESDKQPQWGQRRRN 1855
Query: 485 KAADTRWNKKDSQSLPNQDYPSSTGNWSKRSVEDS 589
D R N + S ++ GN RS +DS
Sbjct: 1856 PRGDFRDNSRGWGSSSGGEW---KGNRPARSADDS 1887
>ref|XP_022012121.1| DNA-directed RNA polymerase V subunit 1-like [Helianthus annuus]
Length = 2083
Score = 87.4 bits (215), Expect = 2e-16
Identities = 61/203 (30%), Positives = 90/203 (44%), Gaps = 3/203 (1%)
Frame = +2
Query: 2 WNKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQT 181
W + S + E G S + A W +KV EDSG S W + +D+
Sbjct: 1492 WGQKSVAEDESGWGGKKSDFNTNKNSGAGSWGQKVI----TEDSG--SGWGQKAVTADEP 1545
Query: 182 QWNKKDSEPLPDQAVPLISSTVGGWGKRS--EEDAGDGWSKVERSGDKAQQSGWGKKAGE 355
W KK S+ ++ SS G WG+++ E+D+G GW + E + D + GWG K E
Sbjct: 1546 GWGKKKSQTDTNK-----SSGAGTWGQKAITEKDSGSGWGQKEVTAD---EPGWGGKKSE 1597
Query: 356 ADWNKKDMQPLPDQAGLLNSSTAGFWGEKSE-DDSANGWGKKAEKAADTRWNKKDSQSLP 532
D SS +G WG+K +DS +GWGKK A + W K S++
Sbjct: 1598 TD----------------KSSGSGMWGQKVVIEDSGSGWGKKVVPADEPGWGGKKSETDT 1641
Query: 533 NQDYPSSTGNWSKRSVEDSEDAW 601
N+ S G W ++ V+ W
Sbjct: 1642 NKS--SGAGTWGQKVVKSDGPGW 1662
Score = 87.0 bits (214), Expect = 3e-16
Identities = 60/183 (32%), Positives = 89/183 (48%), Gaps = 5/183 (2%)
Frame = +2
Query: 74 EDSASG-WAKKVDKSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLISSTVG 250
++S SG W +KV ++G S W + D++ W K S+ ++ +S G
Sbjct: 1471 KNSGSGSWGQKV-----FTETGLGSGWGQKSVAEDESGWGGKKSDFNTNK-----NSGAG 1520
Query: 251 GWGKRS-EEDAGDGWSKVERSGDKAQQSGWGKKAGEADWNKKDMQPLPDQAGLLNSSTAG 427
WG++ ED+G GW + + D + GWGKK + D NK SS AG
Sbjct: 1521 SWGQKVITEDSGSGWGQKAVTAD---EPGWGKKKSQTDTNK--------------SSGAG 1563
Query: 428 FWGEK--SEDDSANGWGKKAEKAADTRWNKKDSQSLPNQDYPSSTGNWSKRSV-EDSEDA 598
WG+K +E DS +GWG+K A + W K S++ D S +G W ++ V EDS
Sbjct: 1564 TWGQKAITEKDSGSGWGQKEVTADEPGWGGKKSET----DKSSGSGMWGQKVVIEDSGSG 1619
Query: 599 WGK 607
WGK
Sbjct: 1620 WGK 1622
Score = 84.0 bits (206), Expect = 4e-15
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 5/187 (2%)
Frame = +2
Query: 62 KIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLISS 241
K E GW + S N + G+ SSW + +D+ W K +E ++ +S
Sbjct: 1421 KSQNEGDGPGWGG--NSSRNNTEKGSGSSWGQKVVAADEPGWGGKKNETDTNK-----NS 1473
Query: 242 TVGGWGKR--SEEDAGDGWSKVERSGDKAQQSGWGKKAGEADWNKKDMQPLPDQAGLLNS 415
G WG++ +E G GW + + D +SGWG K + + NK +
Sbjct: 1474 GSGSWGQKVFTETGLGSGWGQKSVAED---ESGWGGKKSDFNTNK--------------N 1516
Query: 416 STAGFWGEKS-EDDSANGWGKKAEKAADTRWNKKDSQSLPNQDYPSSTGNWSKRSV--ED 586
S AG WG+K +DS +GWG+KA A + W KK SQ+ N+ S G W ++++ +D
Sbjct: 1517 SGAGSWGQKVITEDSGSGWGQKAVTADEPGWGKKKSQTDTNKS--SGAGTWGQKAITEKD 1574
Query: 587 SEDAWGK 607
S WG+
Sbjct: 1575 SGSGWGQ 1581
Score = 72.4 bits (176), Expect = 3e-11
Identities = 64/225 (28%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Frame = +2
Query: 11 GSQSMPERAGGLISSTAKIVEEDSASGWAKKV------------DKSHNVEDSGAWSSWA 154
G +S +++ G K+V EDS SGW KKV ++ + SGA +W
Sbjct: 1593 GKKSETDKSSGSGMWGQKVVIEDSGSGWGKKVVPADEPGWGGKKSETDTNKSSGA-GTWG 1651
Query: 155 KTGEESDQTQWNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSG 334
+ +SD WN K SEP+ DQ P G WGK+ +A G S K
Sbjct: 1652 QKVVKSDGPGWNSKSSEPV-DQTGP----NDGQWGKKDSWNAAGG-SSSSWGIQKTNTPS 1705
Query: 335 WGK----------KAGEADWNKKDMQPLPDQAGLLNSSTAGFWGEKSED----DSANGWG 472
W K K +DW+KK + Q G WG+K + D+ GWG
Sbjct: 1706 WNKGVEAASESENKTEGSDWSKKLEEKTDSQGG---------WGQKKDQVSGTDTQGGWG 1756
Query: 473 KKAEKAADTRWNKKDSQSLPNQDYPSSTGNWS-KRSVEDSEDAWG 604
+K ++ + T S ++D G+W R VE D G
Sbjct: 1757 QKKDQVSGT----DGSTEKGHEDGEQKPGSWGWNRKVEQKGDQGG 1797
>gb|OTF95291.1| putative nuclear RNA polymerase D1B [Helianthus annuus]
Length = 2146
Score = 87.4 bits (215), Expect = 2e-16
Identities = 61/203 (30%), Positives = 90/203 (44%), Gaps = 3/203 (1%)
Frame = +2
Query: 2 WNKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQT 181
W + S + E G S + A W +KV EDSG S W + +D+
Sbjct: 1555 WGQKSVAEDESGWGGKKSDFNTNKNSGAGSWGQKVI----TEDSG--SGWGQKAVTADEP 1608
Query: 182 QWNKKDSEPLPDQAVPLISSTVGGWGKRS--EEDAGDGWSKVERSGDKAQQSGWGKKAGE 355
W KK S+ ++ SS G WG+++ E+D+G GW + E + D + GWG K E
Sbjct: 1609 GWGKKKSQTDTNK-----SSGAGTWGQKAITEKDSGSGWGQKEVTAD---EPGWGGKKSE 1660
Query: 356 ADWNKKDMQPLPDQAGLLNSSTAGFWGEKSE-DDSANGWGKKAEKAADTRWNKKDSQSLP 532
D SS +G WG+K +DS +GWGKK A + W K S++
Sbjct: 1661 TD----------------KSSGSGMWGQKVVIEDSGSGWGKKVVPADEPGWGGKKSETDT 1704
Query: 533 NQDYPSSTGNWSKRSVEDSEDAW 601
N+ S G W ++ V+ W
Sbjct: 1705 NKS--SGAGTWGQKVVKSDGPGW 1725
Score = 87.0 bits (214), Expect = 3e-16
Identities = 60/183 (32%), Positives = 89/183 (48%), Gaps = 5/183 (2%)
Frame = +2
Query: 74 EDSASG-WAKKVDKSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLISSTVG 250
++S SG W +KV ++G S W + D++ W K S+ ++ +S G
Sbjct: 1534 KNSGSGSWGQKV-----FTETGLGSGWGQKSVAEDESGWGGKKSDFNTNK-----NSGAG 1583
Query: 251 GWGKRS-EEDAGDGWSKVERSGDKAQQSGWGKKAGEADWNKKDMQPLPDQAGLLNSSTAG 427
WG++ ED+G GW + + D + GWGKK + D NK SS AG
Sbjct: 1584 SWGQKVITEDSGSGWGQKAVTAD---EPGWGKKKSQTDTNK--------------SSGAG 1626
Query: 428 FWGEK--SEDDSANGWGKKAEKAADTRWNKKDSQSLPNQDYPSSTGNWSKRSV-EDSEDA 598
WG+K +E DS +GWG+K A + W K S++ D S +G W ++ V EDS
Sbjct: 1627 TWGQKAITEKDSGSGWGQKEVTADEPGWGGKKSET----DKSSGSGMWGQKVVIEDSGSG 1682
Query: 599 WGK 607
WGK
Sbjct: 1683 WGK 1685
Score = 84.0 bits (206), Expect = 4e-15
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 5/187 (2%)
Frame = +2
Query: 62 KIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLISS 241
K E GW + S N + G+ SSW + +D+ W K +E ++ +S
Sbjct: 1484 KSQNEGDGPGWGG--NSSRNNTEKGSGSSWGQKVVAADEPGWGGKKNETDTNK-----NS 1536
Query: 242 TVGGWGKR--SEEDAGDGWSKVERSGDKAQQSGWGKKAGEADWNKKDMQPLPDQAGLLNS 415
G WG++ +E G GW + + D +SGWG K + + NK +
Sbjct: 1537 GSGSWGQKVFTETGLGSGWGQKSVAED---ESGWGGKKSDFNTNK--------------N 1579
Query: 416 STAGFWGEKS-EDDSANGWGKKAEKAADTRWNKKDSQSLPNQDYPSSTGNWSKRSV--ED 586
S AG WG+K +DS +GWG+KA A + W KK SQ+ N+ S G W ++++ +D
Sbjct: 1580 SGAGSWGQKVITEDSGSGWGQKAVTADEPGWGKKKSQTDTNKS--SGAGTWGQKAITEKD 1637
Query: 587 SEDAWGK 607
S WG+
Sbjct: 1638 SGSGWGQ 1644
Score = 72.4 bits (176), Expect = 3e-11
Identities = 64/225 (28%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Frame = +2
Query: 11 GSQSMPERAGGLISSTAKIVEEDSASGWAKKV------------DKSHNVEDSGAWSSWA 154
G +S +++ G K+V EDS SGW KKV ++ + SGA +W
Sbjct: 1656 GKKSETDKSSGSGMWGQKVVIEDSGSGWGKKVVPADEPGWGGKKSETDTNKSSGA-GTWG 1714
Query: 155 KTGEESDQTQWNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSG 334
+ +SD WN K SEP+ DQ P G WGK+ +A G S K
Sbjct: 1715 QKVVKSDGPGWNSKSSEPV-DQTGP----NDGQWGKKDSWNAAGG-SSSSWGIQKTNTPS 1768
Query: 335 WGK----------KAGEADWNKKDMQPLPDQAGLLNSSTAGFWGEKSED----DSANGWG 472
W K K +DW+KK + Q G WG+K + D+ GWG
Sbjct: 1769 WNKGVEAASESENKTEGSDWSKKLEEKTDSQGG---------WGQKKDQVSGTDTQGGWG 1819
Query: 473 KKAEKAADTRWNKKDSQSLPNQDYPSSTGNWS-KRSVEDSEDAWG 604
+K ++ + T S ++D G+W R VE D G
Sbjct: 1820 QKKDQVSGT----DGSTEKGHEDGEQKPGSWGWNRKVEQKGDQGG 1860
>ref|XP_018632625.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X8
[Nicotiana tomentosiformis]
Length = 1981
Score = 85.5 bits (210), Expect = 1e-15
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Frame = +2
Query: 77 DSASGW---AKKVD----KSHNVEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLI 235
+S S W AK+VD +S N SG+WS+W K +E+ + + E
Sbjct: 1440 ESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQ--------- 1490
Query: 236 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAGE-ADWNKKDMQPLPDQAGLLN 412
S ++ WGK+ E+D G +VE + + QSG +K+G + W KK + G +
Sbjct: 1491 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKVE 1550
Query: 413 SSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKKDSQSLPNQDYPSSTGNWSKRSVEDSE 592
WG+K E D + WGKK E+A + S ++ S +W K+ +D
Sbjct: 1551 IDGGSSWGKKVEIDGGSSWGKKVEEA------ENHSHQSGKEEKSESLSSWGKKVEKDGV 1604
Query: 593 DAWGK 607
+WGK
Sbjct: 1605 SSWGK 1609
Score = 85.1 bits (209), Expect = 1e-15
Identities = 65/221 (29%), Positives = 96/221 (43%), Gaps = 20/221 (9%)
Frame = +2
Query: 5 NKGSQSMPERAGGLISSTAKIVEEDSASGWAK-KVDKSHN----VEDSGAWSSWAKTGEE 169
N QS + G +SS K VE+D S W K ++D + VE G SSW K EE
Sbjct: 1517 NHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKVEIDGGSSWGKKVEIDGG-SSWGKKVEE 1575
Query: 170 SDQ---TQWNKKDSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWG 340
++ ++ SE L + V WGK+ E+D G W + + + + SG G
Sbjct: 1576 AENHSHQSGKEEKSESLSSWGKKVEKDGVSSWGKKVEKDGGSSWGEKVEAENTPRPSGKG 1635
Query: 341 KKAGE-ADWNKKDMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKKD 517
+++G + W K+ + WGEK E D + WGKK ++ D K
Sbjct: 1636 EQSGSWSSWGKQ-----------VKEDGGASWGEKVEKDGGSSWGKKVDEPED-----KP 1679
Query: 518 SQSLPNQDYPSSTGNWSKRSVED-----------SEDAWGK 607
QS N + P S +W K+ +D SE +WGK
Sbjct: 1680 HQS-GNGEQPGSWSSWGKKVEKDGGSWDGPKQSNSESSWGK 1719
>gb|PHT74769.1| DNA-directed RNA polymerase V subunit 1 [Capsicum annuum]
Length = 2007
Score = 82.0 bits (201), Expect = 2e-14
Identities = 70/225 (31%), Positives = 96/225 (42%), Gaps = 27/225 (12%)
Frame = +2
Query: 14 SQSMPERAG-----GLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQ 178
+ S P+ +G G S+ K E D S W +KVD++ N E SG+WSS K E D
Sbjct: 1410 ADSNPQESGVIEQSGSWSAWGKKSERDGGSSWGQKVDEAGNGEQSGSWSSRGKE-VEKDG 1468
Query: 179 TQWNKK----------DSEPLPDQAVPLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQ 328
WNKK DS LP G W K+ + D G KV+R G
Sbjct: 1469 GSWNKKVESHQSWKEEDSGTLPSWEKKAEKDGGGSWSKKVDGDGGSWSKKVDRDG----- 1523
Query: 329 SGWGKKAGEADWNKKDMQPLPDQAGLLNS------STAGFWGEK--SEDDSANGW---GK 475
S WG K GE + N + Q+ +S GFWG+K + + W GK
Sbjct: 1524 SSWGNK-GETE-NSPQLSEKEGQSKSWSSRGKEVEKDGGFWGKKVSGSGEQSGSWSSGGK 1581
Query: 476 KAEKAADTRWNKK-DSQSLPNQDYPSSTGNWSKRSVEDSEDAWGK 607
K EK + WNKK + ++ + +W K+ VE +W K
Sbjct: 1582 KVEKDGGS-WNKKVEIHQSGKEEVSGNLSSWEKK-VEQDGGSWLK 1624
Score = 72.0 bits (175), Expect = 5e-11
Identities = 62/258 (24%), Positives = 94/258 (36%), Gaps = 56/258 (21%)
Frame = +2
Query: 2 WNKGSQSMPERAGGLISSTAKIVEEDSASGWAKKVDKSHNVEDSGAWSSWAKTGEESDQ- 178
W+K S + G D A + +K N DS WS+W K +E+++
Sbjct: 1320 WDKASSECAKSGGSW----------DMAGKTQNETEKGVNQSDS--WSAWGKKVDEAEKG 1367
Query: 179 -------TQWNKKDSEPLPDQ-----------------------------AVPLISSTVG 250
+ W KK E + DQ V S +
Sbjct: 1368 VSQSDSWSAWGKKVDEAVSDQNQSGNGEHLGSGSAWGVKANKADSNPQESGVIEQSGSWS 1427
Query: 251 GWGKRSEEDAGDGW-SKVERSGDKAQQSGWGKKAGEAD-----WNKK----------DMQ 382
WGK+SE D G W KV+ +G+ Q W + E + WNKK D
Sbjct: 1428 AWGKKSERDGGSSWGQKVDEAGNGEQSGSWSSRGKEVEKDGGSWNKKVESHQSWKEEDSG 1487
Query: 383 PLPDQAGLLNSSTAGFWGEKSEDDSANGWGKKAEKAADTRWNKKDSQSLPN-QDYPSSTG 559
LP G W +K + D + W KK ++ + NK ++++ P + +
Sbjct: 1488 TLPSWEKKAEKDGGGSWSKKVDGDGGS-WSKKVDRDGSSWGNKGETENSPQLSEKEGQSK 1546
Query: 560 NWSKRSVEDSEDA--WGK 607
+WS R E +D WGK
Sbjct: 1547 SWSSRGKEVEKDGGFWGK 1564
Score = 72.0 bits (175), Expect = 5e-11
Identities = 67/229 (29%), Positives = 87/229 (37%), Gaps = 27/229 (11%)
Frame = +2
Query: 2 WNKG---SQSMPERAGGLISSTAKIVEEDSASGWAKKVDK-----------------SHN 121
WNK QS E G +SS K VE+D S W KKVDK S
Sbjct: 1590 WNKKVEIHQSGKEEVSGNLSSWEKKVEQDGGS-WLKKVDKDGGSWGNKVETQHSPQLSGK 1648
Query: 122 VEDSGAWSSWAKTGEESDQTQWNKKDSEPLPDQAVPLISSTVGGW---GKRSEEDAGDGW 292
E SG+WSSW K E+ W K EP + G W GK+ E+D G W
Sbjct: 1649 EEQSGSWSSWRKPVEKDGGPSWGKNIDEPENNPNQSGNGELSGSWSSKGKKLEKDGG-SW 1707
Query: 293 SKVERSGDKAQQSGWGKKAGEADWNKKDMQPLPDQAGLLNSSTAGFWGEKSEDDSANGWG 472
++S +S WGK + G L S+T G +S D S N W
Sbjct: 1708 DGPKQSN---SESSWGKAT---------------KGGELGSATTE--GNRSLDQSVNDWS 1747
Query: 473 KKAEKAADTRWNKKDSQSLPNQDYPSSTGNWS--KRSVE--DSEDAWGK 607
+ +D + S+ G W+ K VE D + WG+
Sbjct: 1748 SSLSGDGQLNESTRDDSTKNGGWNSSAVGGWNSQKAGVEESDKQPQWGQ 1796