BLASTX nr result

ID: Acanthopanax24_contig00023872 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00023872
         (440 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZM89474.1| hypothetical protein DCAR_023163 [Daucus carota s...    56   4e-06
ref|XP_017258017.1| PREDICTED: serine/arginine repetitive matrix...    56   4e-06
ref|XP_017258015.1| PREDICTED: serine/arginine repetitive matrix...    56   4e-06

>gb|KZM89474.1| hypothetical protein DCAR_023163 [Daucus carota subsp. sativus]
          Length = 1330

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 46/126 (36%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
 Frame = -2

Query: 436  MLQIADYQPRQMDGPS--DSPLVQATKAIQNMLSVGEP----LSAQSYPATGSASKPYSS 275
            +LQ AD+Q + M+ PS  D   + AT+A  N  SV EP    +S Q +PAT S SK YSS
Sbjct: 803  VLQNADHQAQPMEAPSARDPESLPATEAHLNSHSVPEPHPDTVSYQLHPATASVSKSYSS 862

Query: 274  -----QHLGAGELSXXXXXXXXXXXXXXXSISQAVTAPLLLQPLRDYNMMPPTAKYPSHP 110
                  HL +GE S                 S+    P   Q  RD  +MP +++Y S P
Sbjct: 863  DTFSTHHLRSGEQSPKKSYYASQFLPPPPPTSEDANTP---QMPRDCIVMPQSSRYQSLP 919

Query: 109  TLSDNF 92
            T  D+F
Sbjct: 920  TPPDSF 925


>ref|XP_017258017.1| PREDICTED: serine/arginine repetitive matrix protein 2-like isoform
            X2 [Daucus carota subsp. sativus]
          Length = 1392

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 46/126 (36%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
 Frame = -2

Query: 436  MLQIADYQPRQMDGPS--DSPLVQATKAIQNMLSVGEP----LSAQSYPATGSASKPYSS 275
            +LQ AD+Q + M+ PS  D   + AT+A  N  SV EP    +S Q +PAT S SK YSS
Sbjct: 794  VLQNADHQAQPMEAPSARDPESLPATEAHLNSHSVPEPHPDTVSYQLHPATASVSKSYSS 853

Query: 274  -----QHLGAGELSXXXXXXXXXXXXXXXSISQAVTAPLLLQPLRDYNMMPPTAKYPSHP 110
                  HL +GE S                 S+    P   Q  RD  +MP +++Y S P
Sbjct: 854  DTFSTHHLRSGEQSPKKSYYASQFLPPPPPTSEDANTP---QMPRDCIVMPQSSRYQSLP 910

Query: 109  TLSDNF 92
            T  D+F
Sbjct: 911  TPPDSF 916


>ref|XP_017258015.1| PREDICTED: serine/arginine repetitive matrix protein 2-like isoform
            X1 [Daucus carota subsp. sativus]
          Length = 1394

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 46/126 (36%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
 Frame = -2

Query: 436  MLQIADYQPRQMDGPS--DSPLVQATKAIQNMLSVGEP----LSAQSYPATGSASKPYSS 275
            +LQ AD+Q + M+ PS  D   + AT+A  N  SV EP    +S Q +PAT S SK YSS
Sbjct: 796  VLQNADHQAQPMEAPSARDPESLPATEAHLNSHSVPEPHPDTVSYQLHPATASVSKSYSS 855

Query: 274  -----QHLGAGELSXXXXXXXXXXXXXXXSISQAVTAPLLLQPLRDYNMMPPTAKYPSHP 110
                  HL +GE S                 S+    P   Q  RD  +MP +++Y S P
Sbjct: 856  DTFSTHHLRSGEQSPKKSYYASQFLPPPPPTSEDANTP---QMPRDCIVMPQSSRYQSLP 912

Query: 109  TLSDNF 92
            T  D+F
Sbjct: 913  TPPDSF 918


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