BLASTX nr result

ID: Acanthopanax24_contig00023622 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00023622
         (470 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    41   9e-06

>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 41.2 bits (95), Expect(2) = 9e-06
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = +1

Query: 7    HHFGKKLWSLKIPPKVRHFLWRAFCQSVGIYRGLQ 111
            H     LWSL + PKVRHFLWRA   S+ + + LQ
Sbjct: 1036 HRVWNILWSLNVSPKVRHFLWRACTSSLPVRKVLQ 1070



 Score = 35.8 bits (81), Expect(2) = 9e-06
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
 Frame = +2

Query: 134  CCGFERETIFHALISCPAAIATW-----FASPLGLP*NGL*VCLLNYDQMIDQVCIAAMV 298
            CC  E ET FH    CP ++  W     +    G+    +   L+ + QM  +V      
Sbjct: 1082 CCAREDETQFHLFYRCPMSLKLWEELGSYILLPGIEDEAMCDTLVRWSQMDAKVVQKGCY 1141

Query: 299  VLWSIW 316
            +LW++W
Sbjct: 1142 ILWNVW 1147


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