BLASTX nr result
ID: Acanthopanax24_contig00023402
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00023402
(495 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KZN08441.1| hypothetical protein DCAR_000987 [Daucus carota s... 94 2e-19
ref|XP_006354699.2| PREDICTED: pentatricopeptide repeat-containi... 91 2e-18
ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-18
gb|PHU00570.1| Pentatricopeptide repeat-containing protein, chlo... 91 3e-18
ref|XP_015071445.1| PREDICTED: pentatricopeptide repeat-containi... 90 6e-18
ref|XP_019224228.1| PREDICTED: pentatricopeptide repeat-containi... 90 6e-18
ref|XP_016444053.1| PREDICTED: pentatricopeptide repeat-containi... 90 6e-18
ref|XP_009762907.1| PREDICTED: pentatricopeptide repeat-containi... 90 6e-18
ref|XP_008440667.1| PREDICTED: pentatricopeptide repeat-containi... 90 7e-18
ref|XP_016441969.1| PREDICTED: pentatricopeptide repeat-containi... 89 2e-17
ref|XP_009608341.1| PREDICTED: pentatricopeptide repeat-containi... 89 2e-17
ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi... 89 2e-17
gb|PHT31969.1| Pentatricopeptide repeat-containing protein, chlo... 89 2e-17
ref|XP_016551852.1| PREDICTED: pentatricopeptide repeat-containi... 89 2e-17
ref|XP_024194546.1| pentatricopeptide repeat-containing protein ... 88 4e-17
ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containi... 86 1e-16
ref|XP_008227123.1| PREDICTED: pentatricopeptide repeat-containi... 86 3e-16
ref|XP_007212021.1| pentatricopeptide repeat-containing protein ... 86 3e-16
ref|XP_022894187.1| pentatricopeptide repeat-containing protein ... 85 4e-16
gb|KNA19680.1| hypothetical protein SOVF_059320 [Spinacia oleracea] 84 4e-16
>gb|KZN08441.1| hypothetical protein DCAR_000987 [Daucus carota subsp. sativus]
Length = 445
Score = 94.4 bits (233), Expect = 2e-19
Identities = 49/66 (74%), Positives = 54/66 (81%), Gaps = 5/66 (7%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSK-----ARPRPASDKK 331
LLYKAYTKADM ELLQKLL+ MDKDGI+PNKRFFLDALGAFGSSK A+ PA+D+K
Sbjct: 375 LLYKAYTKADMNELLQKLLKHMDKDGIVPNKRFFLDALGAFGSSKANYSTAKRLPATDRK 434
Query: 330 GLSKPA 313
KPA
Sbjct: 435 APLKPA 440
>ref|XP_006354699.2| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Solanum tuberosum]
ref|XP_006354698.2| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Solanum tuberosum]
ref|XP_015167479.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Solanum tuberosum]
Length = 477
Score = 91.3 bits (225), Expect = 2e-18
Identities = 45/59 (76%), Positives = 49/59 (83%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSK 319
LLYKAYTKADMKEL+QKLL MD+DGIIPNK+FFLDALGAFGS+ R D KGLSK
Sbjct: 414 LLYKAYTKADMKELVQKLLTCMDEDGIIPNKKFFLDALGAFGSAPTNRREVGDNKGLSK 472
>ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Solanum lycopersicum]
ref|XP_010319770.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Solanum lycopersicum]
Length = 478
Score = 91.3 bits (225), Expect = 2e-18
Identities = 45/59 (76%), Positives = 49/59 (83%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSK 319
LLYKAYTKADMKEL+QKLL MD+DGIIPNK+FFLDALGAFGS+ R D KGLSK
Sbjct: 415 LLYKAYTKADMKELVQKLLTYMDEDGIIPNKKFFLDALGAFGSAPTNRRAVGDNKGLSK 473
>gb|PHU00570.1| Pentatricopeptide repeat-containing protein, chloroplastic
[Capsicum chinense]
Length = 471
Score = 90.9 bits (224), Expect = 3e-18
Identities = 44/59 (74%), Positives = 49/59 (83%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSK 319
LLYKAYTKADMK+L+QKLL MDKDGIIPNK+FFLDALGAFGS+ + D KGLSK
Sbjct: 408 LLYKAYTKADMKDLVQKLLSCMDKDGIIPNKKFFLDALGAFGSAPTNQKAVGDNKGLSK 466
>ref|XP_015071445.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Solanum pennellii]
Length = 478
Score = 90.1 bits (222), Expect = 6e-18
Identities = 44/59 (74%), Positives = 49/59 (83%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSK 319
LLYKAYTKADMKEL+QKLL MD+DGIIPNK+FFLD+LGAFGS+ R D KGLSK
Sbjct: 415 LLYKAYTKADMKELVQKLLTYMDEDGIIPNKKFFLDSLGAFGSAPTNRRAVGDNKGLSK 473
>ref|XP_019224228.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Nicotiana attenuata]
gb|OIT33517.1| pentatricopeptide repeat-containing protein, chloroplastic
[Nicotiana attenuata]
Length = 488
Score = 90.1 bits (222), Expect = 6e-18
Identities = 44/59 (74%), Positives = 49/59 (83%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSK 319
LLYKAYTKADMKEL+QKLL MDKDGIIPNK+FFLDALGAFG+ + A D KGL+K
Sbjct: 425 LLYKAYTKADMKELVQKLLTCMDKDGIIPNKKFFLDALGAFGTGPISQKAAGDNKGLNK 483
>ref|XP_016444053.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Nicotiana tabacum]
Length = 488
Score = 90.1 bits (222), Expect = 6e-18
Identities = 44/59 (74%), Positives = 49/59 (83%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSK 319
LLYKAYTKADMKEL+QKLL MDKDGIIPNK+FFLDALGAFG+ + A D KGL+K
Sbjct: 425 LLYKAYTKADMKELVQKLLTCMDKDGIIPNKKFFLDALGAFGTGPMSQKAAGDNKGLNK 483
>ref|XP_009762907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Nicotiana sylvestris]
Length = 488
Score = 90.1 bits (222), Expect = 6e-18
Identities = 44/59 (74%), Positives = 49/59 (83%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSK 319
LLYKAYTKADMKEL+QKLL MDKDGIIPNK+FFLDALGAFG+ + A D KGL+K
Sbjct: 425 LLYKAYTKADMKELVQKLLTCMDKDGIIPNKKFFLDALGAFGTGPMSQKAAGDNKGLNK 483
>ref|XP_008440667.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Cucumis melo]
Length = 531
Score = 90.1 bits (222), Expect = 7e-18
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKG 328
LLYKAYTKADMKELL+KLL++MDK GIIPNKRFFLDALG GSS+ +P PA K G
Sbjct: 420 LLYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTG 475
>ref|XP_016441969.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Nicotiana tabacum]
Length = 488
Score = 89.0 bits (219), Expect = 2e-17
Identities = 43/59 (72%), Positives = 49/59 (83%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSK 319
LLYKAYTKADMKEL+QKLL MDKDGIIPNK+FFLDALGAFG+ + A D KGL++
Sbjct: 425 LLYKAYTKADMKELVQKLLTCMDKDGIIPNKKFFLDALGAFGTGPLSQKAAGDNKGLNR 483
>ref|XP_009608341.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Nicotiana tomentosiformis]
Length = 488
Score = 89.0 bits (219), Expect = 2e-17
Identities = 43/59 (72%), Positives = 49/59 (83%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSK 319
LLYKAYTKADMKEL+QKLL MDKDGIIPNK+FFLDALGAFG+ + A D KGL++
Sbjct: 425 LLYKAYTKADMKELVQKLLTCMDKDGIIPNKKFFLDALGAFGTGPLSQKAAGDNKGLNR 483
>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
emb|CBI21486.3| unnamed protein product, partial [Vitis vinifera]
Length = 489
Score = 89.0 bits (219), Expect = 2e-17
Identities = 44/64 (68%), Positives = 50/64 (78%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSKP 316
LLYKAYTKAD KELL+KLL+ MD DGI+PNKRFFL+ALGAFGSS A A GL++P
Sbjct: 424 LLYKAYTKADQKELLEKLLKLMDSDGILPNKRFFLEALGAFGSSPASQESAGSTTGLTRP 483
Query: 315 ANIA 304
N A
Sbjct: 484 RNSA 487
>gb|PHT31969.1| Pentatricopeptide repeat-containing protein, chloroplastic
[Capsicum baccatum]
Length = 471
Score = 88.6 bits (218), Expect = 2e-17
Identities = 43/59 (72%), Positives = 48/59 (81%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSK 319
LLYKAYTKAD K+L+QKLL MDKDGIIPNK+FFLDALGAFGS+ + D KGLSK
Sbjct: 408 LLYKAYTKADTKDLVQKLLSCMDKDGIIPNKKFFLDALGAFGSAPTNQKAVGDNKGLSK 466
>ref|XP_016551852.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Capsicum annuum]
ref|XP_016551853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Capsicum annuum]
ref|XP_016551854.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Capsicum annuum]
gb|PHT65866.1| Pentatricopeptide repeat-containing protein, chloroplastic
[Capsicum annuum]
Length = 471
Score = 88.6 bits (218), Expect = 2e-17
Identities = 43/59 (72%), Positives = 48/59 (81%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSK 319
LLYKAYTKAD K+L+QKLL MDKDGIIPNK+FFLDALGAFGS+ + D KGLSK
Sbjct: 408 LLYKAYTKADTKDLVQKLLSCMDKDGIIPNKKFFLDALGAFGSAPTNQKAVGDNKGLSK 466
>ref|XP_024194546.1| pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Rosa chinensis]
Length = 480
Score = 87.8 bits (216), Expect = 4e-17
Identities = 43/60 (71%), Positives = 48/60 (80%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSKP 316
LLYKAYTKA+MKELL KLL+ MDKDGI+PNKRFFL+ALGAF SS P S GLS+P
Sbjct: 414 LLYKAYTKANMKELLDKLLKSMDKDGIVPNKRFFLEALGAFLSSTGSPESGSASTGLSRP 473
>ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Cucumis sativus]
gb|KGN48788.1| hypothetical protein Csa_6G501290 [Cucumis sativus]
Length = 528
Score = 86.3 bits (212), Expect = 1e-16
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKG 328
LLYKAYTKAD KELL+KLL++MDK GIIPNKRFFLDALG GSS+ +P PA + G
Sbjct: 417 LLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTG 472
>ref|XP_008227123.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Prunus mume]
Length = 486
Score = 85.5 bits (210), Expect = 3e-16
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSKP 316
LLYKAYTKA+MKELL+KLL+ MDKDGI+PNKRFFL+ALGAF SS P + GLS+P
Sbjct: 421 LLYKAYTKANMKELLEKLLKCMDKDGIVPNKRFFLEALGAFFSSPGSPGSVTATTGLSRP 480
>ref|XP_007212021.1| pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Prunus persica]
gb|ONI13666.1| hypothetical protein PRUPE_4G236100 [Prunus persica]
Length = 486
Score = 85.5 bits (210), Expect = 3e-16
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSKP 316
LLYKAYTKA+MKELL+KLL+ MDKDGI+PNKRFFL+ALGAF SS P + GLS+P
Sbjct: 421 LLYKAYTKANMKELLEKLLKCMDKDGIVPNKRFFLEALGAFFSSPGSPGSVTATTGLSRP 480
>ref|XP_022894187.1| pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Olea europaea var. sylvestris]
Length = 492
Score = 85.1 bits (209), Expect = 4e-16
Identities = 43/64 (67%), Positives = 49/64 (76%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPASDKKGLSKP 316
LLYKAYTKADMKELLQKLL MD+DGIIPNKRFFLDALGA GSS+A + G ++
Sbjct: 427 LLYKAYTKADMKELLQKLLTCMDRDGIIPNKRFFLDALGAIGSSRANQKSTRKTDGSNRQ 486
Query: 315 ANIA 304
+ A
Sbjct: 487 TDSA 490
>gb|KNA19680.1| hypothetical protein SOVF_059320 [Spinacia oleracea]
Length = 352
Score = 84.3 bits (207), Expect = 4e-16
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = -1
Query: 495 LLYKAYTKADMKELLQKLLRDMDKDGIIPNKRFFLDALGAFGSSKARPRPAS 340
LLYKAYTKA+MK+LLQKLL+ MD+DGI+PNKRFFL+ALGAFGSS +PAS
Sbjct: 281 LLYKAYTKANMKDLLQKLLKCMDQDGIVPNKRFFLEALGAFGSSTTTKKPAS 332