BLASTX nr result

ID: Acanthopanax24_contig00023208 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00023208
         (952 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30412.3| unnamed protein product, partial [Vitis vinifera]      70   4e-11
ref|XP_002279238.1| PREDICTED: putative protein TPRXL [Vitis vin...    70   5e-10

>emb|CBI30412.3| unnamed protein product, partial [Vitis vinifera]
          Length = 140

 Score = 70.1 bits (170), Expect = 4e-11
 Identities = 42/125 (33%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
 Frame = -3

Query: 641 SPSSTGDDTDSYSNNSALSHEDSF-LILRRQL----EVQGAFDLVKDNMLPILLQKLKQV 477
           S  S+ +  +S++    +SH D   L++ ++L      +G F+ +K N+ PIL+++LK++
Sbjct: 11  SVPSSANRENSWNPREDVSHGDQLDLVMAQRLFERSATKGIFNNLKTNLQPILVKRLKEL 70

Query: 476 RRQNVTVKSGLETAASIDLLRLFGASSCKLDDIGRSALQGARLLEEGQNKVNNGKGMLKS 297
            +   T+  GLE A S  LL+L  +S+ KL+ +G+ A +GA LL+EG   +  G+  L+S
Sbjct: 71  SQIKPTIDVGLEMADSAYLLKLLNSSNPKLETVGKKAGKGAMLLQEGMRLIEQGQEALRS 130

Query: 296 AFDEI 282
           A  E+
Sbjct: 131 AILEL 135


>ref|XP_002279238.1| PREDICTED: putative protein TPRXL [Vitis vinifera]
          Length = 285

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 42/125 (33%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
 Frame = -3

Query: 641 SPSSTGDDTDSYSNNSALSHEDSF-LILRRQL----EVQGAFDLVKDNMLPILLQKLKQV 477
           S  S+ +  +S++    +SH D   L++ ++L      +G F+ +K N+ PIL+++LK++
Sbjct: 156 SVPSSANRENSWNPREDVSHGDQLDLVMAQRLFERSATKGIFNNLKTNLQPILVKRLKEL 215

Query: 476 RRQNVTVKSGLETAASIDLLRLFGASSCKLDDIGRSALQGARLLEEGQNKVNNGKGMLKS 297
            +   T+  GLE A S  LL+L  +S+ KL+ +G+ A +GA LL+EG   +  G+  L+S
Sbjct: 216 SQIKPTIDVGLEMADSAYLLKLLNSSNPKLETVGKKAGKGAMLLQEGMRLIEQGQEALRS 275

Query: 296 AFDEI 282
           A  E+
Sbjct: 276 AILEL 280


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