BLASTX nr result

ID: Acanthopanax24_contig00023140 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00023140
         (820 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017257030.1| PREDICTED: uncharacterized protein LOC108226...    79   5e-14
gb|KZM93676.1| hypothetical protein DCAR_016921 [Daucus carota s...    62   5e-08

>ref|XP_017257030.1| PREDICTED: uncharacterized protein LOC108226569 [Daucus carota
           subsp. sativus]
 gb|KZM91920.1| hypothetical protein DCAR_020715 [Daucus carota subsp. sativus]
          Length = 197

 Score = 79.0 bits (193), Expect = 5e-14
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 23/150 (15%)
 Frame = -1

Query: 718 MSGLSRPGKALTVVSL-------SELLYVLWRRRLSLLQDLSE---IRLDRHPEL----- 584
           MSG+S  GKALTV+ +       SELLYVLWRRR+   +         +++ P+L     
Sbjct: 1   MSGVSNLGKALTVIFICSLVALFSELLYVLWRRRILFRRHRDPPQTFNVEQSPDLLLTSN 60

Query: 583 -TSKDGXXXXXXXXXXXXXLPTEPLSP------WVDEPMEVIDVLKLREMNGPSRVLFTI 425
            +SK                P     P        D+ +E+ID+ KLREM GPSRVLFTI
Sbjct: 61  ISSKKDLLYFLCLRTQSRVEPDGSAPPRRSDGSGEDDDVEIIDLYKLREMYGPSRVLFTI 120

Query: 424 KEE-REYLESEKSLS*AINRERTRNLSESF 338
           KEE +E LESEKS +      ++RNLS+SF
Sbjct: 121 KEEDKEDLESEKSTT------KSRNLSQSF 144


>gb|KZM93676.1| hypothetical protein DCAR_016921 [Daucus carota subsp. sativus]
          Length = 173

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 8/121 (6%)
 Frame = -1

Query: 673 LSELLYVLWRRRLSLLQDLSEIRLDRHPELTSKDGXXXXXXXXXXXXXLPTEPLSPWVDE 494
           L+E+L+V+WRRR+S  QDLS         LT+ D                 EP++   DE
Sbjct: 23  LAEILFVVWRRRVSHQQDLS---------LTASDHDHGGTIFCCSKTQSRVEPITGGSDE 73

Query: 493 PMEV----IDVLKLREMNGPSRVLFTIKEE----REYLESEKSLS*AINRERTRNLSESF 338
             EV    +D LKLR+M   SR+LFTI+EE    +E LES+KS+S A +    + LS  F
Sbjct: 74  AYEVQDDSVDALKLRDM---SRLLFTIREEEEEGKEDLESQKSVSSATSICERKYLSNGF 130

Query: 337 E 335
           E
Sbjct: 131 E 131


Top