BLASTX nr result
ID: Acanthopanax24_contig00023132
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00023132
(853 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010273569.1| PREDICTED: heterogeneous nuclear ribonucleop... 86 4e-15
gb|OVA09425.1| RNA recognition motif domain [Macleaya cordata] >... 73 8e-11
ref|XP_006356840.1| PREDICTED: RNA-binding protein 1-like [Solan... 67 4e-09
ref|XP_009800333.1| PREDICTED: RNA-binding protein 1 [Nicotiana ... 67 4e-09
ref|XP_019156555.1| PREDICTED: heterogeneous nuclear ribonucleop... 66 1e-08
ref|XP_019156554.1| PREDICTED: heterogeneous nuclear ribonucleop... 66 1e-08
ref|XP_019229866.1| PREDICTED: RNA-binding protein 1 [Nicotiana ... 66 1e-08
ref|XP_016568913.1| PREDICTED: RNA-binding protein 1 [Capsicum a... 65 3e-08
ref|XP_010943641.1| PREDICTED: heterogeneous nuclear ribonucleop... 64 7e-08
ref|XP_016483067.1| PREDICTED: RNA-binding protein 1-like isofor... 63 1e-07
ref|XP_008798913.1| PREDICTED: DAZ-associated protein 1-like [Ph... 63 2e-07
ref|XP_008796977.1| PREDICTED: heterogeneous nuclear ribonucleop... 62 2e-07
ref|XP_009610224.1| PREDICTED: RNA-binding protein 1 [Nicotiana ... 62 4e-07
ref|XP_016483069.1| PREDICTED: RNA-binding protein 1-like isofor... 61 5e-07
ref|XP_018810431.1| PREDICTED: heterogeneous nuclear ribonucleop... 60 1e-06
ref|XP_016468497.1| PREDICTED: RNA-binding protein 1, partial [N... 59 1e-06
ref|XP_015885089.1| PREDICTED: RNA-binding protein 1-like [Zizip... 60 2e-06
>ref|XP_010273569.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Nelumbo
nucifera]
Length = 408
Score = 85.5 bits (210), Expect = 4e-15
Identities = 69/195 (35%), Positives = 82/195 (42%), Gaps = 17/195 (8%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDGNNN-------GYNLRVMSGRG-----YQNGNFQPYSPRY 705
KSFHEL K EVKRA+PKDGN N GYN+RV GRG YQ G + PYSPRY
Sbjct: 184 KSFHELNDKTVEVKRAVPKDGNTNNCNSNYHGYNMRVGGGRGSLFGSYQCGVYPPYSPRY 243
Query: 704 DPFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWMTPF-ASSSPWTSPAM 528
F P A SPW+ PAM
Sbjct: 244 GVFPGYAPVPLTGYGGAAGYPYGAGTYGGGYPVGGFGGVGYG--AAPIGAPRSPWSGPAM 301
Query: 527 IG---SPLPYTSSANYYSXXXXXXXXXXXXXXXXYNGIMGTTPNGKSS*LSVDDAQMAAG 357
+G SP+PY S+A Y Y GIMG NGK + D+QM AG
Sbjct: 302 VGARRSPVPYGSAAIYPGYVNGGVGGVLGVASGGYRGIMGPQANGKWNQSGGGDSQMPAG 361
Query: 356 RT-SQIERLNVDIDS 315
T +I+ +D D+
Sbjct: 362 TTRPRIDGAKLDDDA 376
>gb|OVA09425.1| RNA recognition motif domain [Macleaya cordata]
gb|OVA09426.1| RNA recognition motif domain [Macleaya cordata]
Length = 391
Score = 72.8 bits (177), Expect = 8e-11
Identities = 61/191 (31%), Positives = 77/191 (40%), Gaps = 13/191 (6%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDGNNN----GYNLRVMSGRG-----YQNGNFQPYSPRYDPF 696
KSFHEL K EVKRA+PKDG+NN G+N+R+ GRG +Q G + PYSPRY +
Sbjct: 177 KSFHELNDKVVEVKRAVPKDGSNNGNNGGFNMRMGGGRGSLFGSFQGGLYPPYSPRYGIY 236
Query: 695 QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWMTPF-ASSSPWTSPAMIG- 522
M P AS SPW M+
Sbjct: 237 SGYAPPHLSGYATAGAYPYGAGGYTGGYPMGSYGAYG----MAPIVASRSPWNGSTMVSS 292
Query: 521 --SPLPYTSSANYYSXXXXXXXXXXXXXXXXYNGIMGTTPNGKSS*LSVDDAQMAAGRTS 348
SP+PY +A Y Y GIMG NGK + DAQM +
Sbjct: 293 RRSPVPYAGAAIY----PGYMNGVVGMAGGGYRGIMGPAGNGKWNQGGGGDAQMPGTTSP 348
Query: 347 QIERLNVDIDS 315
++ +D DS
Sbjct: 349 SVDGGKLDDDS 359
>ref|XP_006356840.1| PREDICTED: RNA-binding protein 1-like [Solanum tuberosum]
Length = 344
Score = 67.4 bits (163), Expect = 4e-09
Identities = 53/172 (30%), Positives = 67/172 (38%), Gaps = 12/172 (6%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDGNN---NGYNLRVMSGRG------YQNGNFQPYSPRYDPF 696
+SFHEL GK EVK+AIPKDG+N NGY+ R+ +G G YQ G + YSP Y
Sbjct: 175 ESFHELSGKFVEVKKAIPKDGSNNSGNGYHSRIGNGNGSNYNNIYQQGMYPSYSPSY--- 231
Query: 695 QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWMTPFASSSPWTSPAMI--- 525
Y +T PW +P M
Sbjct: 232 ---VYSPGPVPGYGSVAEYPYGFGTFGGGYPIGAYPGIGYGITSLMPRGPWNNPTMTGLR 288
Query: 524 GSPLPYTSSANYYSXXXXXXXXXXXXXXXXYNGIMGTTPNGKSS*LSVDDAQ 369
G PLPY ++ +Y Y GI+G N K +SV DAQ
Sbjct: 289 GGPLPYGNTGGFYPAYINSGVGVMNMATNGYGGILGAGINEKPGQVSVRDAQ 340
>ref|XP_009800333.1| PREDICTED: RNA-binding protein 1 [Nicotiana sylvestris]
Length = 350
Score = 67.4 bits (163), Expect = 4e-09
Identities = 56/172 (32%), Positives = 66/172 (38%), Gaps = 12/172 (6%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDGN---NNGYNLRVMSGRG-----YQNGNFQPYSPRYDPFQ 693
K+FHEL GK EVKRAIPKD N +NGY+ RV +G G YQ G + YSPRY
Sbjct: 180 KNFHELSGKLVEVKRAIPKDENSNSSNGYHARVGNGSGSNYNAYQQGMYPSYSPRY---- 235
Query: 692 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWMTPFASSSPWTSPAMIG--- 522
+ PW +P M G
Sbjct: 236 -VYCCGPVSGYGNVAGYPYGVGTFGGNYPAGAYPGIGYGITSLVPPRGPWNNPTMTGLRG 294
Query: 521 -SPLPYTSSANYYSXXXXXXXXXXXXXXXXYNGIMGTTPNGKSS*LSVDDAQ 369
SPLPY S+ Y Y GI+G N KS +SV DAQ
Sbjct: 295 NSPLPYGSTGAIYPTYINGGIGVMGVATNGYGGILGAAVNEKSGQVSVRDAQ 346
>ref|XP_019156555.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
X2 [Ipomoea nil]
Length = 376
Score = 66.2 bits (160), Expect = 1e-08
Identities = 59/185 (31%), Positives = 76/185 (41%), Gaps = 14/185 (7%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDG--NNNGYNLRVMSGRG-----YQNGNFQPYSPR---YDP 699
K+FHEL GK EVKRA+PKDG +N GYN RV SG YQ+GN+ YSPR Y
Sbjct: 170 KNFHELCGKLVEVKRAVPKDGSVSNIGYNARVTSGTSSTIGDYQHGNYPAYSPRYGVYPA 229
Query: 698 FQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWMTPFASSSPWTSPAMI-- 525
+ Y + F SPW PAM
Sbjct: 230 YGPVTGYGSAAAAAAAGYPYGAGMVGGGFPSGAGAYGGLGYGVASFQPRSPWNVPAMAGP 289
Query: 524 -GSPLPYTSSANYYSXXXXXXXXXXXXXXXXYNGIMGTTPNGKSS*LSVDDAQMAAGRT- 351
GSP+ Y +A +Y +N +G +GKS + ++Q A+G
Sbjct: 290 RGSPVLYGGTA-FYPAYMNGGAGAMSLSASGFNEFLGGGMSGKSGQFGMGESQGASGSVH 348
Query: 350 SQIER 336
SQI R
Sbjct: 349 SQIGR 353
>ref|XP_019156554.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
X1 [Ipomoea nil]
Length = 389
Score = 66.2 bits (160), Expect = 1e-08
Identities = 59/185 (31%), Positives = 76/185 (41%), Gaps = 14/185 (7%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDG--NNNGYNLRVMSGRG-----YQNGNFQPYSPR---YDP 699
K+FHEL GK EVKRA+PKDG +N GYN RV SG YQ+GN+ YSPR Y
Sbjct: 170 KNFHELCGKLVEVKRAVPKDGSVSNIGYNARVTSGTSSTIGDYQHGNYPAYSPRYGVYPA 229
Query: 698 FQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWMTPFASSSPWTSPAMI-- 525
+ Y + F SPW PAM
Sbjct: 230 YGPVTGYGSAAAAAAAGYPYGAGMVGGGFPSGAGAYGGLGYGVASFQPRSPWNVPAMAGP 289
Query: 524 -GSPLPYTSSANYYSXXXXXXXXXXXXXXXXYNGIMGTTPNGKSS*LSVDDAQMAAGRT- 351
GSP+ Y +A +Y +N +G +GKS + ++Q A+G
Sbjct: 290 RGSPVLYGGTA-FYPAYMNGGAGAMSLSASGFNEFLGGGMSGKSGQFGMGESQGASGSVH 348
Query: 350 SQIER 336
SQI R
Sbjct: 349 SQIGR 353
>ref|XP_019229866.1| PREDICTED: RNA-binding protein 1 [Nicotiana attenuata]
gb|OIT29822.1| rna-binding protein 1 [Nicotiana attenuata]
Length = 351
Score = 65.9 bits (159), Expect = 1e-08
Identities = 54/172 (31%), Positives = 66/172 (38%), Gaps = 12/172 (6%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDGN---NNGYNLRVMSGRG-----YQNGNFQPYSPRYDPFQ 693
K+FHEL GK EVKRAIPKD N +NGY+ R+ +G G YQ G + YSPRY
Sbjct: 182 KNFHELSGKLVEVKRAIPKDENSNSSNGYHARIGNGSGSNYNTYQQGMYPSYSPRY---- 237
Query: 692 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWMTPFASSSPWTSPAMIG--- 522
Y + PW +P M G
Sbjct: 238 --VYCCGPVSGYGNVAGYPYGVATFGGNFPAGAYPGIGYGIASLVPPGPWNNPTMTGLRG 295
Query: 521 -SPLPYTSSANYYSXXXXXXXXXXXXXXXXYNGIMGTTPNGKSS*LSVDDAQ 369
SPLPY ++ Y Y GI+G N KS +SV D Q
Sbjct: 296 SSPLPYGNTGAIYPTYMNGGIGVMGVATNGYGGILGAGVNEKSGQVSVRDVQ 347
>ref|XP_016568913.1| PREDICTED: RNA-binding protein 1 [Capsicum annuum]
Length = 331
Score = 64.7 bits (156), Expect = 3e-08
Identities = 57/176 (32%), Positives = 67/176 (38%), Gaps = 16/176 (9%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDGNN---NGYNLRVMSGRG------YQNGNFQPYSPRYDPF 696
K+FHEL K EVKRAIPKDGNN NGY+ R+ +G G YQ G + PYSPRY
Sbjct: 175 KTFHELNDKLVEVKRAIPKDGNNNSGNGYHSRIGNGNGSNYNNTYQQGMYPPYSPRY--- 231
Query: 695 QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWMTPFASSSPWTSPAMI--- 525
Y +T PW +P M
Sbjct: 232 ---------VYCSGPVSGYPYGVGTFGGSYPVGAYPGIGYGITSLMPRGPWNNPTMAGIR 282
Query: 524 GSPLPYTSSANYYSXXXXXXXXXXXXXXXXYNGIMGTTPNG----KSS*LSVDDAQ 369
GSPLPY ++ Y G MG NG S +SV DAQ
Sbjct: 283 GSPLPYGNTGVVYPAYMNGGI-----------GAMGMATNGYGGNLGSGISVGDAQ 327
>ref|XP_010943641.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Elaeis
guineensis]
Length = 382
Score = 63.9 bits (154), Expect = 7e-08
Identities = 34/65 (52%), Positives = 38/65 (58%), Gaps = 14/65 (21%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDGN---------NNGYNLRVMSGRG-----YQNGNFQPYSP 711
KSFHEL GK EVK A+PKDGN NN YN R + GRG Y G + PYSP
Sbjct: 199 KSFHELNGKFVEVKIAVPKDGNNHNNNGNHDNNNYNSRTIGGRGPAFSNYPGGIYSPYSP 258
Query: 710 RYDPF 696
RY+ F
Sbjct: 259 RYEYF 263
>ref|XP_016483067.1| PREDICTED: RNA-binding protein 1-like isoform X1 [Nicotiana
tabacum]
Length = 350
Score = 63.2 bits (152), Expect = 1e-07
Identities = 53/172 (30%), Positives = 64/172 (37%), Gaps = 12/172 (6%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDGN---NNGYNLRVMSGRG-----YQNGNFQPYSPRYDPFQ 693
K+FHEL GK EVKRAIPKD N +NGY+ RV +G G YQ G + YSPRY
Sbjct: 180 KNFHELSGKLVEVKRAIPKDENSNSSNGYHARVGNGSGSNYNAYQQGMYPSYSPRY---- 235
Query: 692 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWMTPFASSSPWTSPAMIG--- 522
+ PW +P M G
Sbjct: 236 -VYCCGPVSGYGNVAGYPYGVGTFGGNYPAGAYPGIGYGITSLVPPRGPWNNPTMTGLRG 294
Query: 521 -SPLPYTSSANYYSXXXXXXXXXXXXXXXXYNGIMGTTPNGKSS*LSVDDAQ 369
SPLPY S+ Y Y GI+G N KS + + D Q
Sbjct: 295 NSPLPYGSTGAIYPTYINGGIGVMGVATNGYGGILGAAVNEKSGQVIIRDVQ 346
>ref|XP_008798913.1| PREDICTED: DAZ-associated protein 1-like [Phoenix dactylifera]
ref|XP_017699894.1| PREDICTED: DAZ-associated protein 1-like [Phoenix dactylifera]
Length = 391
Score = 62.8 bits (151), Expect = 2e-07
Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 14/65 (21%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDGN---------NNGYNLRVMSGRG-----YQNGNFQPYSP 711
KSFHEL GK+ EVK A+PKDGN NN YN R + GRG Y G + PY+P
Sbjct: 208 KSFHELNGKYVEVKIAVPKDGNNHSNNGNHDNNNYNSRTIGGRGAAFCNYPGGIYSPYTP 267
Query: 710 RYDPF 696
RY F
Sbjct: 268 RYGYF 272
>ref|XP_008796977.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Phoenix
dactylifera]
ref|XP_008796978.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Phoenix
dactylifera]
Length = 372
Score = 62.4 bits (150), Expect = 2e-07
Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 14/65 (21%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDGN---------NNGYNLRVMSGRG-----YQNGNFQPYSP 711
KSFHEL GK+ EVK A+PKDGN NN YN R+M GRG + G + PY+P
Sbjct: 198 KSFHELNGKYVEVKIAVPKDGNNHSNNSNRDNNNYNSRMMGGRGPVLSNHPGGIYSPYTP 257
Query: 710 RYDPF 696
RY F
Sbjct: 258 RYGFF 262
>ref|XP_009610224.1| PREDICTED: RNA-binding protein 1 [Nicotiana tomentosiformis]
Length = 352
Score = 61.6 bits (148), Expect = 4e-07
Identities = 51/172 (29%), Positives = 65/172 (37%), Gaps = 12/172 (6%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDGN---NNGYNLRVMSGRG-----YQNGNFQPYSPRYDPFQ 693
K+FHEL GK EVKRAIPKD N +NGY++R+ +G G YQ G + YSPRY
Sbjct: 182 KNFHELSGKLVEVKRAIPKDENSNSSNGYHVRIGNGSGSNYNPYQQGMYPSYSPRY---- 237
Query: 692 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWMTPFASSSPWTSPAMIG--- 522
+ PW +P M G
Sbjct: 238 -VYCCGPVSGYGNVAGYPYGVGTFGGNYPAGAYPGIGYGIASLVPPRGPWNNPTMTGLRG 296
Query: 521 -SPLPYTSSANYYSXXXXXXXXXXXXXXXXYNGIMGTTPNGKSS*LSVDDAQ 369
SPLPY ++ Y Y GI+G N KS + + D Q
Sbjct: 297 SSPLPYGNTGAIYPTYMNGGIGVMGVATNEYGGILGAGVNEKSGQVIIRDVQ 348
>ref|XP_016483069.1| PREDICTED: RNA-binding protein 1-like isoform X2 [Nicotiana
tabacum]
Length = 350
Score = 61.2 bits (147), Expect = 5e-07
Identities = 52/172 (30%), Positives = 64/172 (37%), Gaps = 12/172 (6%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDGN---NNGYNLRVMSGRG-----YQNGNFQPYSPRYDPFQ 693
K+FHEL GK EVKRAIPKD N +NGY+ RV +G G YQ G + YSPRY
Sbjct: 180 KNFHELSGKLVEVKRAIPKDENSNSSNGYHARVGNGSGSNYNAYQQGMYPSYSPRY---- 235
Query: 692 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWMTPFASSSPWTSPAMIG--- 522
+ PW +P M G
Sbjct: 236 -VYCCGPVSGYGNVAGYPYGVGTFGGNYPAGAYPGIGYGIASLVPPRGPWNNPTMTGLRG 294
Query: 521 -SPLPYTSSANYYSXXXXXXXXXXXXXXXXYNGIMGTTPNGKSS*LSVDDAQ 369
SPLPY ++ Y Y GI+G N KS + + D Q
Sbjct: 295 SSPLPYGNTGAIYPTYMNGGIGVMGVATNEYGGILGAGVNEKSGQVIIRDVQ 346
>ref|XP_018810431.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Juglans
regia]
Length = 330
Score = 60.1 bits (144), Expect = 1e-06
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Frame = -3
Query: 845 SFHELGGKHAEVKRAIPKDGNN---NGYNLRVMSGRGYQNGNFQPYSPRY 705
SFHEL G+ EVKRA+PK+ NN NG+N+R+ GRG GN+ PYSP Y
Sbjct: 175 SFHELNGRLVEVKRAVPKEANNGSDNGFNMRI-EGRGGPPGNYPPYSPGY 223
>ref|XP_016468497.1| PREDICTED: RNA-binding protein 1, partial [Nicotiana tabacum]
Length = 250
Score = 59.3 bits (142), Expect = 1e-06
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Frame = -3
Query: 848 KSFHELGGKHAEVKRAIPKDGN---NNGYNLRVMSGRG-----YQNGNFQPYSPRY 705
K+FHEL GK EVKRAIPKD N +NGY++R+ +G G YQ G + YSPRY
Sbjct: 182 KNFHELSGKLVEVKRAIPKDENSNSSNGYHVRIGNGSGSNYNPYQQGMYPSYSPRY 237
>ref|XP_015885089.1| PREDICTED: RNA-binding protein 1-like [Ziziphus jujuba]
Length = 344
Score = 59.7 bits (143), Expect = 2e-06
Identities = 31/57 (54%), Positives = 36/57 (63%), Gaps = 8/57 (14%)
Frame = -3
Query: 845 SFHELGGKHAEVKRAIPKDGNN---NGYNLRVMSGRG-----YQNGNFQPYSPRYDP 699
SFHEL G+ EVKRA+PK+ NN NGY +R GRG Y GN+ PY PRY P
Sbjct: 170 SFHELNGRLVEVKRAVPKEENNWNGNGYYVRNGGGRGSSGNVYPPGNYSPYGPRYAP 226