BLASTX nr result

ID: Acanthopanax24_contig00023083 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00023083
         (439 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP48541.1| Thylakoid membrane protein slr0575 family [Cajanu...    55   5e-06
ref|XP_020233920.1| uncharacterized protein LOC109814013 [Cajanu...    55   5e-06
gb|ABK95719.1| unknown [Populus trichocarpa]                           51   7e-06
emb|CBI39337.3| unnamed protein product, partial [Vitis vinifera]      53   8e-06

>gb|KYP48541.1| Thylakoid membrane protein slr0575 family [Cajanus cajan]
          Length = 283

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 189 KVTEDGKYCLALVFEVKDLQLSDFEKRQ 272
           +VTEDGKYCL LVFE KDLQLSDFEKRQ
Sbjct: 210 EVTEDGKYCLVLVFEAKDLQLSDFEKRQ 237


>ref|XP_020233920.1| uncharacterized protein LOC109814013 [Cajanus cajan]
          Length = 286

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 189 KVTEDGKYCLALVFEVKDLQLSDFEKRQ 272
           +VTEDGKYCL LVFE KDLQLSDFEKRQ
Sbjct: 210 EVTEDGKYCLVLVFEAKDLQLSDFEKRQ 237


>gb|ABK95719.1| unknown [Populus trichocarpa]
          Length = 70

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = +3

Query: 189 KVTEDGKYCLALVFEVKDLQLSDFEKRQ 272
           +VTEDGKYCL LVFE K LQLSDFEKRQ
Sbjct: 5   EVTEDGKYCLVLVFESKALQLSDFEKRQ 32


>emb|CBI39337.3| unnamed protein product, partial [Vitis vinifera]
          Length = 160

 Score = 53.1 bits (126), Expect = 8e-06
 Identities = 25/31 (80%), Positives = 26/31 (83%)
 Frame = +3

Query: 180 SFHKVTEDGKYCLALVFEVKDLQLSDFEKRQ 272
           +F  VTEDGKYCL LVFE K LQLSDFEKRQ
Sbjct: 112 NFWMVTEDGKYCLVLVFEAKALQLSDFEKRQ 142


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