BLASTX nr result
ID: Acanthopanax24_contig00022828
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00022828
(692 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010654041.1| PREDICTED: polyadenylation and cleavage fact... 129 1e-30
ref|XP_015898702.1| PREDICTED: uncharacterized protein LOC107432... 127 5e-30
ref|XP_015898701.1| PREDICTED: uncharacterized protein LOC107432... 127 5e-30
emb|CDP15365.1| unnamed protein product [Coffea canephora] 125 4e-29
ref|XP_021644863.1| polyadenylation and cleavage factor homolog ... 124 6e-29
gb|ONH96260.1| hypothetical protein PRUPE_7G117000 [Prunus persica] 124 7e-29
gb|ONH96261.1| hypothetical protein PRUPE_7G117000 [Prunus persica] 124 7e-29
ref|XP_017258098.1| PREDICTED: uncharacterized protein LOC108227... 124 8e-29
ref|XP_020423628.1| polyadenylation and cleavage factor homolog ... 124 8e-29
ref|XP_020423627.1| polyadenylation and cleavage factor homolog ... 124 8e-29
gb|KZM91858.1| hypothetical protein DCAR_020777 [Daucus carota s... 124 8e-29
ref|XP_008241291.1| PREDICTED: polyadenylation and cleavage fact... 119 4e-27
ref|XP_008241290.1| PREDICTED: polyadenylation and cleavage fact... 119 4e-27
emb|CBI30249.3| unnamed protein product, partial [Vitis vinifera] 118 1e-26
gb|PON52951.1| RNA polymerase II-binding domain containing prote... 117 1e-26
ref|XP_024032993.1| polyadenylation and cleavage factor homolog ... 117 2e-26
ref|XP_021908530.1| polyadenylation and cleavage factor homolog ... 117 3e-26
gb|PON36342.1| RNA polymerase II-binding domain containing prote... 114 2e-25
ref|XP_009352997.1| PREDICTED: polyadenylation and cleavage fact... 111 2e-24
ref|XP_009352996.1| PREDICTED: polyadenylation and cleavage fact... 111 2e-24
>ref|XP_010654041.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Vitis
vinifera]
Length = 1086
Score = 129 bits (324), Expect = 1e-30
Identities = 96/234 (41%), Positives = 129/234 (55%), Gaps = 4/234 (1%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLEA---KVTSASIVSQPS 520
GIL N+S +GSI P SF D A V +Q P Q + +V +AS+ S PS
Sbjct: 711 GILSNSSVSGSI-PKTSFQDTGAVLQSV-IQPPLPSGPPPAQFTSSGPRVATASL-SGPS 767
Query: 519 HEIISVSSALPQRQVEQXXXXXXXXXXXXXXSAPV-HATNMVNAASNPVXXXXXXLVAKG 343
H+ S S+ L QR+VE+ + + ++N+ + ASNP+ LVAKG
Sbjct: 768 HDSKSASN-LSQRKVERPPLPPGPPPPSSLAGSGLPQSSNVTSNASNPIANLLSSLVAKG 826
Query: 342 LISASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSK 163
LISAS TES+ + + Q QS I T P + + S T + +S+++
Sbjct: 827 LISASKTESSTHVPTQMPARLQNQSAGISTISP--IPVSSVSVASSVPLSSTMDAVSHTE 884
Query: 162 SSAKNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
+AK SV + S E+KNLIGFEFK D+IRESHP VISEL DDLPH+CSICGL
Sbjct: 885 PAAKASVAVTQSTSVEVKNLIGFEFKSDIIRESHPSVISELFDDLPHQCSICGL 938
>ref|XP_015898702.1| PREDICTED: uncharacterized protein LOC107432146 isoform X2 [Ziziphus
jujuba]
ref|XP_015898703.1| PREDICTED: uncharacterized protein LOC107432146 isoform X3 [Ziziphus
jujuba]
Length = 1119
Score = 127 bits (320), Expect = 5e-30
Identities = 87/233 (37%), Positives = 123/233 (52%), Gaps = 3/233 (1%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLEAKVT---SASIVSQPS 520
GIL +NS IPNL+F ++ Q ++ PTQL + V+ SAS + S
Sbjct: 746 GILSSNS-----IPNLNFQNSGQLPLQSVLRPPLPSGPPPTQLTSSVSEVVSASSLDHTS 800
Query: 519 HEIISVSSALPQRQVEQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKGL 340
H+ +S S Q++V Q + A+N+VN SNP+ LVAKGL
Sbjct: 801 HDKLSTHSKTSQKKVGQPSLPPSVPPPLLDDESE-DASNVVNNVSNPISNLLSSLVAKGL 859
Query: 339 ISASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSKS 160
ISAS TES + + + Q +SP + + V++ +++S S+
Sbjct: 860 ISASKTESQTIVASQVPSELQNKSPGVASTSSMPVSLVSDSTVSSIM-----DDVSFSEP 914
Query: 159 SAKNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
AK+S+ +P S EI+NLIGFEFKPDVIRE HP V+SEL DD HRC++CGL
Sbjct: 915 IAKSSIAVPQSTNSEIQNLIGFEFKPDVIREFHPSVVSELFDDFTHRCNVCGL 967
>ref|XP_015898701.1| PREDICTED: uncharacterized protein LOC107432146 isoform X1 [Ziziphus
jujuba]
Length = 1139
Score = 127 bits (320), Expect = 5e-30
Identities = 87/233 (37%), Positives = 123/233 (52%), Gaps = 3/233 (1%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLEAKVT---SASIVSQPS 520
GIL +NS IPNL+F ++ Q ++ PTQL + V+ SAS + S
Sbjct: 766 GILSSNS-----IPNLNFQNSGQLPLQSVLRPPLPSGPPPTQLTSSVSEVVSASSLDHTS 820
Query: 519 HEIISVSSALPQRQVEQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKGL 340
H+ +S S Q++V Q + A+N+VN SNP+ LVAKGL
Sbjct: 821 HDKLSTHSKTSQKKVGQPSLPPSVPPPLLDDESE-DASNVVNNVSNPISNLLSSLVAKGL 879
Query: 339 ISASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSKS 160
ISAS TES + + + Q +SP + + V++ +++S S+
Sbjct: 880 ISASKTESQTIVASQVPSELQNKSPGVASTSSMPVSLVSDSTVSSIM-----DDVSFSEP 934
Query: 159 SAKNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
AK+S+ +P S EI+NLIGFEFKPDVIRE HP V+SEL DD HRC++CGL
Sbjct: 935 IAKSSIAVPQSTNSEIQNLIGFEFKPDVIREFHPSVVSELFDDFTHRCNVCGL 987
>emb|CDP15365.1| unnamed protein product [Coffea canephora]
Length = 1068
Score = 125 bits (313), Expect = 4e-29
Identities = 91/232 (39%), Positives = 118/232 (50%), Gaps = 2/232 (0%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXP--TQLEAKVTSASIVSQPSH 517
GILG N +GS+ P+LS DA + ++ Q T + +++ AS++SQ S+
Sbjct: 693 GILGGNLVSGSV-PSLSSQDAGVAATEASKQPTLTSHPSTHSTMVGPRISPASVLSQSSN 751
Query: 516 EIISVSSALPQRQVEQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKGLI 337
E SS QR Q SA N NA S PV LV KGLI
Sbjct: 752 ENTPKSSI--QRNGGQLPVPPETLPSSIVGSALAQPLNAANAVSAPVSSLLSSLVEKGLI 809
Query: 336 SASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSKSS 157
SAS TES S P G+ Q QS EI + +++ T +EL S+ +
Sbjct: 810 SASKTESVTSLMPDAPGQSQNQSLEIASTSSSPISLPLCSSS-------TKQELPISELT 862
Query: 156 AKNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
+K LP S E+KNLIGF+FKPDV+RE HP VISELL+DL +CSICGL
Sbjct: 863 SKAKDVLPESSAAEMKNLIGFQFKPDVLREFHPAVISELLEDLLFKCSICGL 914
>ref|XP_021644863.1| polyadenylation and cleavage factor homolog 4 [Hevea brasiliensis]
Length = 1085
Score = 124 bits (312), Expect = 6e-29
Identities = 86/231 (37%), Positives = 119/231 (51%), Gaps = 1/231 (0%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLEAKVTSASIVSQP-SHE 514
GIL N + G + N SF D + S+ +Q P QL + T + S P SH+
Sbjct: 714 GILSNITTVG--LTNKSFQDVGKNPSESSIQPPLPSGPPPPQLTSSGTRVASASAPLSHD 771
Query: 513 IISVSSALPQRQVEQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKGLIS 334
+ V+S + +R+ EQ + + A+N VN +NP+ LVAKGLIS
Sbjct: 772 VTLVASNVSERKEEQPPLPPGPPP------SSLQASNAVNKVANPISNLLSSLVAKGLIS 825
Query: 333 ASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSKSSA 154
AS + ++++ P + + + Q+P I S + T++E+S KS A
Sbjct: 826 ASKSGTSSTAPPQLPTQSETQNPSITNSSNTSTSSLPVSSAVSHSS--TTDEVSLPKSDA 883
Query: 153 KNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
KNSV L E K+LIG EFK DVIRE HP VIS L DDLPH+CSICGL
Sbjct: 884 KNSVVLSEPTSAETKSLIGLEFKSDVIRELHPPVISSLFDDLPHQCSICGL 934
>gb|ONH96260.1| hypothetical protein PRUPE_7G117000 [Prunus persica]
Length = 1022
Score = 124 bits (311), Expect = 7e-29
Identities = 93/234 (39%), Positives = 122/234 (52%), Gaps = 4/234 (1%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLE---AKVTSASIVSQPS 520
GIL + S TGS+ P+L+ D + SQ VQ PTQ+ +KV SA S S
Sbjct: 640 GILSDKSITGSL-PSLNLRDMGQNQSQSGVQPPLPSGPPPTQVALPGSKVASAPSSSHLS 698
Query: 519 HEIISVSSALPQRQV-EQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKG 343
HE SS + ++V +A +A+ +VN AS+P+ LVAKG
Sbjct: 699 HENSPASSDISLKKVGHPPLPPSQPLSSSLEGTASANASTVVNNASDPISNLLSSLVAKG 758
Query: 342 LISASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSK 163
LISAS +ES S + + Q QS + TP SV++ S ++++S ++
Sbjct: 759 LISASKSESPTPVSSQMPNELQNQS--VSTPVTSSVSVSPVSASPSLPVSSRTDDVSLAE 816
Query: 162 SSAKNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
AK S LP S E KN IG EFKPD IRE HP VI EL DDLPH+CSICGL
Sbjct: 817 PLAKTSAALPQSSKIETKNPIGIEFKPDKIREFHPSVIEELFDDLPHKCSICGL 870
>gb|ONH96261.1| hypothetical protein PRUPE_7G117000 [Prunus persica]
Length = 1025
Score = 124 bits (311), Expect = 7e-29
Identities = 93/234 (39%), Positives = 122/234 (52%), Gaps = 4/234 (1%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLE---AKVTSASIVSQPS 520
GIL + S TGS+ P+L+ D + SQ VQ PTQ+ +KV SA S S
Sbjct: 643 GILSDKSITGSL-PSLNLRDMGQNQSQSGVQPPLPSGPPPTQVALPGSKVASAPSSSHLS 701
Query: 519 HEIISVSSALPQRQV-EQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKG 343
HE SS + ++V +A +A+ +VN AS+P+ LVAKG
Sbjct: 702 HENSPASSDISLKKVGHPPLPPSQPLSSSLEGTASANASTVVNNASDPISNLLSSLVAKG 761
Query: 342 LISASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSK 163
LISAS +ES S + + Q QS + TP SV++ S ++++S ++
Sbjct: 762 LISASKSESPTPVSSQMPNELQNQS--VSTPVTSSVSVSPVSASPSLPVSSRTDDVSLAE 819
Query: 162 SSAKNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
AK S LP S E KN IG EFKPD IRE HP VI EL DDLPH+CSICGL
Sbjct: 820 PLAKTSAALPQSSKIETKNPIGIEFKPDKIREFHPSVIEELFDDLPHKCSICGL 873
>ref|XP_017258098.1| PREDICTED: uncharacterized protein LOC108227463 [Daucus carota subsp.
sativus]
Length = 1038
Score = 124 bits (311), Expect = 8e-29
Identities = 95/230 (41%), Positives = 115/230 (50%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLEAKVTSASIVSQPSHEI 511
GILG NS G I P S +A A +SQ + PT+ E KV A+ SHE
Sbjct: 677 GILGKNSVIGDI-PKTSSQNAIALSSQTSSRPPQPSGVSPTKSEVKVALATNAVPLSHES 735
Query: 510 ISVSSALPQRQVEQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKGLISA 331
++S QR+ E+ SA + A+NP+ L+AKGLISA
Sbjct: 736 TFITST--QREKERPPLPHGPPPSSTVSSA------LEQTATNPMSNLLNTLMAKGLISA 787
Query: 330 SNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSKSSAK 151
S TESTA P II P Q P IVT S T ++LS SK + K
Sbjct: 788 SKTESTAP--PQIIADPCNQIPGIVTTMVSSTLTVSSAIPPSS----TCDKLSESKPTTK 841
Query: 150 NSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
N V+L S + KN IGFEFKP+VIR HP VI ELL DLPH+CSICGL
Sbjct: 842 NPVSLDASSFNDFKNHIGFEFKPEVIRVCHPSVIDELLHDLPHQCSICGL 891
>ref|XP_020423628.1| polyadenylation and cleavage factor homolog 4 isoform X2 [Prunus
persica]
gb|ONH96256.1| hypothetical protein PRUPE_7G117000 [Prunus persica]
gb|ONH96257.1| hypothetical protein PRUPE_7G117000 [Prunus persica]
Length = 1095
Score = 124 bits (311), Expect = 8e-29
Identities = 93/234 (39%), Positives = 122/234 (52%), Gaps = 4/234 (1%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLE---AKVTSASIVSQPS 520
GIL + S TGS+ P+L+ D + SQ VQ PTQ+ +KV SA S S
Sbjct: 713 GILSDKSITGSL-PSLNLRDMGQNQSQSGVQPPLPSGPPPTQVALPGSKVASAPSSSHLS 771
Query: 519 HEIISVSSALPQRQV-EQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKG 343
HE SS + ++V +A +A+ +VN AS+P+ LVAKG
Sbjct: 772 HENSPASSDISLKKVGHPPLPPSQPLSSSLEGTASANASTVVNNASDPISNLLSSLVAKG 831
Query: 342 LISASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSK 163
LISAS +ES S + + Q QS + TP SV++ S ++++S ++
Sbjct: 832 LISASKSESPTPVSSQMPNELQNQS--VSTPVTSSVSVSPVSASPSLPVSSRTDDVSLAE 889
Query: 162 SSAKNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
AK S LP S E KN IG EFKPD IRE HP VI EL DDLPH+CSICGL
Sbjct: 890 PLAKTSAALPQSSKIETKNPIGIEFKPDKIREFHPSVIEELFDDLPHKCSICGL 943
>ref|XP_020423627.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Prunus
persica]
gb|ONH96258.1| hypothetical protein PRUPE_7G117000 [Prunus persica]
gb|ONH96259.1| hypothetical protein PRUPE_7G117000 [Prunus persica]
Length = 1098
Score = 124 bits (311), Expect = 8e-29
Identities = 93/234 (39%), Positives = 122/234 (52%), Gaps = 4/234 (1%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLE---AKVTSASIVSQPS 520
GIL + S TGS+ P+L+ D + SQ VQ PTQ+ +KV SA S S
Sbjct: 716 GILSDKSITGSL-PSLNLRDMGQNQSQSGVQPPLPSGPPPTQVALPGSKVASAPSSSHLS 774
Query: 519 HEIISVSSALPQRQV-EQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKG 343
HE SS + ++V +A +A+ +VN AS+P+ LVAKG
Sbjct: 775 HENSPASSDISLKKVGHPPLPPSQPLSSSLEGTASANASTVVNNASDPISNLLSSLVAKG 834
Query: 342 LISASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSK 163
LISAS +ES S + + Q QS + TP SV++ S ++++S ++
Sbjct: 835 LISASKSESPTPVSSQMPNELQNQS--VSTPVTSSVSVSPVSASPSLPVSSRTDDVSLAE 892
Query: 162 SSAKNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
AK S LP S E KN IG EFKPD IRE HP VI EL DDLPH+CSICGL
Sbjct: 893 PLAKTSAALPQSSKIETKNPIGIEFKPDKIREFHPSVIEELFDDLPHKCSICGL 946
>gb|KZM91858.1| hypothetical protein DCAR_020777 [Daucus carota subsp. sativus]
Length = 1334
Score = 124 bits (311), Expect = 8e-29
Identities = 95/230 (41%), Positives = 115/230 (50%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLEAKVTSASIVSQPSHEI 511
GILG NS G I P S +A A +SQ + PT+ E KV A+ SHE
Sbjct: 675 GILGKNSVIGDI-PKTSSQNAIALSSQTSSRPPQPSGVSPTKSEVKVALATNAVPLSHES 733
Query: 510 ISVSSALPQRQVEQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKGLISA 331
++S QR+ E+ SA + A+NP+ L+AKGLISA
Sbjct: 734 TFITST--QREKERPPLPHGPPPSSTVSSA------LEQTATNPMSNLLNTLMAKGLISA 785
Query: 330 SNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSKSSAK 151
S TESTA P II P Q P IVT S T ++LS SK + K
Sbjct: 786 SKTESTAP--PQIIADPCNQIPGIVTTMVSSTLTVSSAIPPSS----TCDKLSESKPTTK 839
Query: 150 NSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
N V+L S + KN IGFEFKP+VIR HP VI ELL DLPH+CSICGL
Sbjct: 840 NPVSLDASSFNDFKNHIGFEFKPEVIRVCHPSVIDELLHDLPHQCSICGL 889
>ref|XP_008241291.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Prunus mume]
Length = 1091
Score = 119 bits (298), Expect = 4e-27
Identities = 92/233 (39%), Positives = 118/233 (50%), Gaps = 3/233 (1%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLE---AKVTSASIVSQPS 520
GIL + S TGS+ P+L+ D SQ V PTQ+ +KV SA S S
Sbjct: 713 GILSDKSITGSL-PSLNLRDMGQIQSQPGVLPPLPSGPPPTQVALPGSKVASAPSSSHLS 771
Query: 519 HEIISVSSALPQRQVEQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKGL 340
HE SS ++V +A +A+ +VN AS+P+ LVAKGL
Sbjct: 772 HENSPASS---DKKVGHPPLPPSQPLSSLEGTASANASTVVNNASDPISNLLSSLVAKGL 828
Query: 339 ISASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSKS 160
ISAS +ES S + + Q QS I TP SV++ S + ++S ++
Sbjct: 829 ISASKSESPTPVSSQMPNELQNQS--ISTPVTGSVSVSPVSASPSLPVSSRTNDVSLAEP 886
Query: 159 SAKNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
AK S LP S E +N IG EFKPD IRE HP VI EL DDLPH+CSICGL
Sbjct: 887 VAKTSAALPQSSKIETRNAIGIEFKPDKIREFHPSVIEELFDDLPHKCSICGL 939
>ref|XP_008241290.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Prunus mume]
Length = 1094
Score = 119 bits (298), Expect = 4e-27
Identities = 92/233 (39%), Positives = 118/233 (50%), Gaps = 3/233 (1%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLE---AKVTSASIVSQPS 520
GIL + S TGS+ P+L+ D SQ V PTQ+ +KV SA S S
Sbjct: 716 GILSDKSITGSL-PSLNLRDMGQIQSQPGVLPPLPSGPPPTQVALPGSKVASAPSSSHLS 774
Query: 519 HEIISVSSALPQRQVEQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKGL 340
HE SS ++V +A +A+ +VN AS+P+ LVAKGL
Sbjct: 775 HENSPASS---DKKVGHPPLPPSQPLSSLEGTASANASTVVNNASDPISNLLSSLVAKGL 831
Query: 339 ISASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSKS 160
ISAS +ES S + + Q QS I TP SV++ S + ++S ++
Sbjct: 832 ISASKSESPTPVSSQMPNELQNQS--ISTPVTGSVSVSPVSASPSLPVSSRTNDVSLAEP 889
Query: 159 SAKNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
AK S LP S E +N IG EFKPD IRE HP VI EL DDLPH+CSICGL
Sbjct: 890 VAKTSAALPQSSKIETRNAIGIEFKPDKIREFHPSVIEELFDDLPHKCSICGL 942
>emb|CBI30249.3| unnamed protein product, partial [Vitis vinifera]
Length = 1049
Score = 118 bits (295), Expect = 1e-26
Identities = 88/231 (38%), Positives = 120/231 (51%), Gaps = 1/231 (0%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLEAKVTSASIVSQPSHEI 511
GIL N+S +GSI P SF D A V ++ + S P+H+
Sbjct: 694 GILSNSSVSGSI-PKTSFQDTGAVLQSV--------------IQPPLPSGP---PPAHKS 735
Query: 510 ISVSSALPQRQVEQXXXXXXXXXXXXXXSAPV-HATNMVNAASNPVXXXXXXLVAKGLIS 334
+S L QR+VE+ + + ++N+ + ASNP+ LVAKGLIS
Sbjct: 736 ---ASNLSQRKVERPPLPPGPPPPSSLAGSGLPQSSNVTSNASNPIANLLSSLVAKGLIS 792
Query: 333 ASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSKSSA 154
AS TES+ + + Q QS I T P + + S T + +S+++ +A
Sbjct: 793 ASKTESSTHVPTQMPARLQNQSAGISTISP--IPVSSVSVASSVPLSSTMDAVSHTEPAA 850
Query: 153 KNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
K SV + S E+KNLIGFEFK D+IRESHP VISEL DDLPH+CSICGL
Sbjct: 851 KASVAVTQSTSVEVKNLIGFEFKSDIIRESHPSVISELFDDLPHQCSICGL 901
>gb|PON52951.1| RNA polymerase II-binding domain containing protein [Trema
orientalis]
Length = 1073
Score = 117 bits (294), Expect = 1e-26
Identities = 88/236 (37%), Positives = 117/236 (49%), Gaps = 6/236 (2%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLEAKVTSASIVSQPSHEI 511
GIL N+S S +PNL+F D+ SQ Q PTQ+ + A++ S H +
Sbjct: 690 GILSNSSIATSNLPNLNFRDSGQLPSQTG-QLPLPSGPTPTQVMDSGSRAALTSSLGHSL 748
Query: 510 I---SVSSALPQRQVEQXXXXXXXXXXXXXXSAPV-HATNMVNAASNPVXXXXXXLVAKG 343
S SS +P+++VEQ + +A+N+V S+P+ LVAKG
Sbjct: 749 YDGASASSKIPRKKVEQPPLPPGPPPSSSPLGGALDNASNVVKKVSDPISNLLSSLVAKG 808
Query: 342 LISASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSK 163
LISAS +ES A P + + Q+ T P ++ + SE S+S
Sbjct: 809 LISASKSESPAVIPPKVPTEIQKSPSVTSTSSVPLTSVSVSTASSTRDDTSFSEPDSDSP 868
Query: 162 SSAKNSVTL--PVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
+ S L P S EIKNLIGFEFKPD IRE HP V+SELLD HRC ICGL
Sbjct: 869 VAYPQSTKLEIPQSTKLEIKNLIGFEFKPDKIREFHPSVVSELLDGFEHRCDICGL 924
>ref|XP_024032993.1| polyadenylation and cleavage factor homolog 4 isoform X2 [Morus
notabilis]
Length = 1064
Score = 117 bits (293), Expect = 2e-26
Identities = 83/234 (35%), Positives = 121/234 (51%), Gaps = 4/234 (1%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLEAKVTSASIVSQPSHEI 511
GIL N+S T S + NL+F + SQ T L +K TS S +S SH+
Sbjct: 687 GILSNSSITTSSLSNLNFQSSAQLPSQA--GQPPLPTGTHTNLGSKATSTSSISHSSHDG 744
Query: 510 ISVSSALPQRQVEQXXXXXXXXXXXXXXS-APVHATNMVNAASNPVXXXXXXLVAKGLIS 334
+SVSS + Q++ + A +A+++ N +P+ LVAKGLIS
Sbjct: 745 LSVSSKIFQKKTQSAPLPTGPPPSSSPLRSASENASSVANNTPDPISNLLSSLVAKGLIS 804
Query: 333 ASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSKSSA 154
AS ES + P + + Q++SP I V++ T ++ S S+ +A
Sbjct: 805 ASKKESPQAIPPVVPTETQKKSPSITGTGSVPVSLVSGSTVSS-----TRDDSSISEPTA 859
Query: 153 KNSVTLPVSRLK---EIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
+ V+LP S EIKNLIGF+FKPDV+RE HP V+S+LLD H+C++CGL
Sbjct: 860 DSPVSLPESTKSTNLEIKNLIGFDFKPDVVREFHPSVVSDLLDGFEHQCNMCGL 913
>ref|XP_021908530.1| polyadenylation and cleavage factor homolog 4 [Carica papaya]
Length = 1106
Score = 117 bits (292), Expect = 3e-26
Identities = 86/233 (36%), Positives = 119/233 (51%), Gaps = 3/233 (1%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLEA---KVTSASIVSQPS 520
GIL NNS T +I PN SF +A T Q VQ PT + +V S+++ + S
Sbjct: 729 GILSNNSHTVNI-PNQSFKEAVRRTGQA-VQPPLPSGPPPTVFTSSRPRVASSTLPASGS 786
Query: 519 HEIISVSSALPQRQVEQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKGL 340
+ IS SS QR+++Q SA + + + A +P+ LVAKGL
Sbjct: 787 CDDISASSNSSQRKLDQPLIPSGPPPSSLAGSALPQTSEVESKAPDPISNLLSSLVAKGL 846
Query: 339 ISASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSKS 160
ISAS ++S + + + Q QSP T P VT + + +E+S +
Sbjct: 847 ISASKSDSPSLMETQVPTQSQNQSPANSTSSPMQVTTPVSVQSDVPLAASSLDEVSVIEP 906
Query: 159 SAKNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
SAK S LP S KE +NLIG +FKPD++RE H VI L DDLP++CS CGL
Sbjct: 907 SAKGSANLPQSTTKEAENLIGVQFKPDIVREFHQKVIDGLFDDLPYQCSECGL 959
>gb|PON36342.1| RNA polymerase II-binding domain containing protein [Parasponia
andersonii]
Length = 1073
Score = 114 bits (286), Expect = 2e-25
Identities = 88/236 (37%), Positives = 116/236 (49%), Gaps = 6/236 (2%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLEAKVTSASIVSQPSHEI 511
GIL N+S S +PNL+F D+ SQ Q PTQ+ + A++ S H
Sbjct: 690 GILSNSSIATSNLPNLNFRDSGQLPSQTG-QLPLPSGPTPTQVMDSGSRAALTSSLGHSS 748
Query: 510 I---SVSSALPQRQVEQXXXXXXXXXXXXXXS-APVHATNMVNAASNPVXXXXXXLVAKG 343
S SS +P+++VEQ A +A+N+V S+P+ LVAKG
Sbjct: 749 YDGASASSKIPRKKVEQPPLPPGPPPSSSPLGGASENASNVVKKVSDPISNLLSSLVAKG 808
Query: 342 LISASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSK 163
LISAS +ES A P + + Q+ T P ++ + SE S+S
Sbjct: 809 LISASKSESAAVIPPKVPTEIQKSPSVTSTSSVPLTSVSVSTASSTRDDTSFSEPDSDSP 868
Query: 162 SSAKNSVTL--PVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
+ S L P S EIKNLIGFEFKPD IRE HP V+SELLD +RC ICGL
Sbjct: 869 VAYPQSTKLEIPQSTKLEIKNLIGFEFKPDKIREFHPSVVSELLDGFEYRCDICGL 924
>ref|XP_009352997.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X3 [Pyrus x bretschneideri]
Length = 1025
Score = 111 bits (278), Expect = 2e-24
Identities = 86/233 (36%), Positives = 115/233 (49%), Gaps = 3/233 (1%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLE---AKVTSASIVSQPS 520
GIL + S TGS+ PNL+ D S VQ PTQ+ +KV SA S
Sbjct: 644 GILSDKSITGSL-PNLNLRDMGHIPSLPGVQSPFPSGPPPTQVALPGSKVASALTSGHLS 702
Query: 519 HEIISVSSALPQRQVEQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKGL 340
+ SS + Q++V SA ++ +VN +S+P+ LVAKGL
Sbjct: 703 GDNSPASSNVSQKKVGHLPLPHSQPPSSLEGSASASSSTVVNNSSDPISSLLSSLVAKGL 762
Query: 339 ISASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSKS 160
ISAS +ES +PQ +S + P V++ S +++ S +
Sbjct: 763 ISASKSESLTPVPSQKPTEPQNKS--LGGPATSLVSVSPVSVSTSLPVSSRTDDASLPEP 820
Query: 159 SAKNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
+AK S LP EI+NLIG EFKPD IRE HP VI EL +DLPH+CSICGL
Sbjct: 821 AAKTSAALPQITKTEIRNLIGVEFKPDKIREFHPAVIDELFNDLPHKCSICGL 873
>ref|XP_009352996.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Pyrus x bretschneideri]
Length = 1026
Score = 111 bits (278), Expect = 2e-24
Identities = 86/233 (36%), Positives = 115/233 (49%), Gaps = 3/233 (1%)
Frame = -3
Query: 690 GILGNNSGTGSIIPNLSFHDADASTSQVFVQXXXXXXXXPTQLE---AKVTSASIVSQPS 520
GIL + S TGS+ PNL+ D S VQ PTQ+ +KV SA S
Sbjct: 645 GILSDKSITGSL-PNLNLRDMGHIPSLPGVQSPFPSGPPPTQVALPGSKVASALTSGHLS 703
Query: 519 HEIISVSSALPQRQVEQXXXXXXXXXXXXXXSAPVHATNMVNAASNPVXXXXXXLVAKGL 340
+ SS + Q++V SA ++ +VN +S+P+ LVAKGL
Sbjct: 704 GDNSPASSNVSQKKVGHLPLPHSQPPSSLEGSASASSSTVVNNSSDPISSLLSSLVAKGL 763
Query: 339 ISASNTESTASDSPHIIGKPQRQSPEIVTPKPPSVTIXXXXXXXXXXXSFTSEELSNSKS 160
ISAS +ES +PQ +S + P V++ S +++ S +
Sbjct: 764 ISASKSESLTPVPSQKPTEPQNKS--LGGPATSLVSVSPVSVSTSLPVSSRTDDASLPEP 821
Query: 159 SAKNSVTLPVSRLKEIKNLIGFEFKPDVIRESHPVVISELLDDLPHRCSICGL 1
+AK S LP EI+NLIG EFKPD IRE HP VI EL +DLPH+CSICGL
Sbjct: 822 AAKTSAALPQITKTEIRNLIGVEFKPDKIREFHPAVIDELFNDLPHKCSICGL 874