BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00022777
         (521 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017249653.1| PREDICTED: putative exosome complex componen...    68   7e-13
ref|XP_017249654.1| PREDICTED: putative exosome complex componen...    68   7e-13
gb|OMO67701.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 ...    67   1e-12
ref|XP_021292055.1| putative exosome complex component rrp40 [He...    67   1e-12
ref|XP_007036203.1| PREDICTED: putative exosome complex componen...    67   1e-12
gb|EOY20706.1| PNAS-3 related isoform 3 [Theobroma cacao]              67   1e-12
ref|XP_017220884.1| PREDICTED: putative exosome complex componen...    69   1e-12
ref|XP_007036204.1| PREDICTED: putative exosome complex componen...    67   1e-12
ref|XP_007036206.1| PREDICTED: putative exosome complex componen...    67   1e-12
gb|KZM84561.1| hypothetical protein DCAR_028017 [Daucus carota s...    69   1e-12
gb|EOY20708.1| PNAS-3 related isoform 5 [Theobroma cacao]              67   1e-12
gb|PON93386.1| Exosome complex RNA-binding protein 1/RRP40/RRP [...    69   1e-12
gb|PON73778.1| Exosome complex RNA-binding protein 1/RRP40/RRP [...    69   1e-12
ref|XP_008806895.1| PREDICTED: putative exosome complex componen...    67   1e-12
ref|XP_002282635.1| PREDICTED: putative exosome complex componen...    69   1e-12
gb|OMO81471.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 ...    67   2e-12
ref|XP_016721111.1| PREDICTED: putative exosome complex componen...    67   2e-12
ref|XP_016666803.1| PREDICTED: putative exosome complex componen...    67   2e-12
ref|XP_012478610.1| PREDICTED: putative exosome complex componen...    67   2e-12
ref|XP_012478611.1| PREDICTED: putative exosome complex componen...    67   2e-12

>ref|XP_017249653.1| PREDICTED: putative exosome complex component rrp40 isoform X1
           [Daucus carota subsp. sativus]
 gb|KZM93240.1| hypothetical protein DCAR_016485 [Daucus carota subsp. sativus]
          Length = 241

 Score = 68.2 bits (165), Expect(2) = 7e-13
 Identities = 31/42 (73%), Positives = 36/42 (85%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D   +NFL+DIKGPALA+LPVLAFEGG+RRNIPKFE+G
Sbjct: 83  GIVVDTKAENFLIDIKGPALAYLPVLAFEGGTRRNIPKFEVG 124



 Score = 33.1 bits (74), Expect(2) = 7e-13
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 147 ASGKAAEFGPLKDGYMFETS 166


>ref|XP_017249654.1| PREDICTED: putative exosome complex component rrp40 isoform X2
           [Daucus carota subsp. sativus]
          Length = 212

 Score = 68.2 bits (165), Expect(2) = 7e-13
 Identities = 31/42 (73%), Positives = 36/42 (85%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D   +NFL+DIKGPALA+LPVLAFEGG+RRNIPKFE+G
Sbjct: 54  GIVVDTKAENFLIDIKGPALAYLPVLAFEGGTRRNIPKFEVG 95



 Score = 33.1 bits (74), Expect(2) = 7e-13
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 118 ASGKAAEFGPLKDGYMFETS 137


>gb|OMO67701.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 [Corchorus
           olitorius]
          Length = 273

 Score = 67.4 bits (163), Expect(2) = 1e-12
 Identities = 30/34 (88%), Positives = 34/34 (100%)
 Frame = -1

Query: 395 QNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           +NFL+DIKGPALAFLPVLAFEGG+RRNIPKFE+G
Sbjct: 123 KNFLIDIKGPALAFLPVLAFEGGTRRNIPKFEVG 156



 Score = 33.1 bits (74), Expect(2) = 1e-12
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 179 ASGKAAEFGPLKDGYMFETS 198


>ref|XP_021292055.1| putative exosome complex component rrp40 [Herrania umbratica]
 ref|XP_021292056.1| putative exosome complex component rrp40 [Herrania umbratica]
 ref|XP_021292057.1| putative exosome complex component rrp40 [Herrania umbratica]
          Length = 240

 Score = 67.4 bits (163), Expect(2) = 1e-12
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFL+DIKGP LAFLPVLAFEGG+RRNIPKFE+G
Sbjct: 82  GIVVDSKADNFLIDIKGPVLAFLPVLAFEGGTRRNIPKFEVG 123



 Score = 33.1 bits (74), Expect(2) = 1e-12
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 146 ASGKAAEFGPLKDGYMFETS 165


>ref|XP_007036203.1| PREDICTED: putative exosome complex component rrp40 isoform X1
           [Theobroma cacao]
 gb|EOY20704.1| PNAS-3 related isoform 1 [Theobroma cacao]
          Length = 240

 Score = 67.4 bits (163), Expect(2) = 1e-12
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFL+DIKGP LAFLPVLAFEGG+RRNIPKFE+G
Sbjct: 82  GIVVDSKADNFLIDIKGPVLAFLPVLAFEGGTRRNIPKFEVG 123



 Score = 33.1 bits (74), Expect(2) = 1e-12
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 146 ASGKAAEFGPLKDGYMFETS 165


>gb|EOY20706.1| PNAS-3 related isoform 3 [Theobroma cacao]
          Length = 230

 Score = 67.4 bits (163), Expect(2) = 1e-12
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFL+DIKGP LAFLPVLAFEGG+RRNIPKFE+G
Sbjct: 82  GIVVDSKADNFLIDIKGPVLAFLPVLAFEGGTRRNIPKFEVG 123



 Score = 33.1 bits (74), Expect(2) = 1e-12
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 146 ASGKAAEFGPLKDGYMFETS 165


>ref|XP_017220884.1| PREDICTED: putative exosome complex component rrp40 [Daucus carota
           subsp. sativus]
          Length = 212

 Score = 68.9 bits (167), Expect(2) = 1e-12
 Identities = 32/42 (76%), Positives = 35/42 (83%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFL+DIKGPALAFLPVLAFEGG+RRNIPKFE+G
Sbjct: 54  GIVVDSKADNFLIDIKGPALAFLPVLAFEGGTRRNIPKFEVG 95



 Score = 31.6 bits (70), Expect(2) = 1e-12
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLF 250
           A GKAAEFGPL+DG +F
Sbjct: 118 ASGKAAEFGPLKDGYMF 134


>ref|XP_007036204.1| PREDICTED: putative exosome complex component rrp40 isoform X2
           [Theobroma cacao]
 ref|XP_017973456.1| PREDICTED: putative exosome complex component rrp40 isoform X2
           [Theobroma cacao]
 gb|EOY20705.1| PNAS-3 related isoform 2 [Theobroma cacao]
          Length = 212

 Score = 67.4 bits (163), Expect(2) = 1e-12
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFL+DIKGP LAFLPVLAFEGG+RRNIPKFE+G
Sbjct: 54  GIVVDSKADNFLIDIKGPVLAFLPVLAFEGGTRRNIPKFEVG 95



 Score = 33.1 bits (74), Expect(2) = 1e-12
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 118 ASGKAAEFGPLKDGYMFETS 137


>ref|XP_007036206.1| PREDICTED: putative exosome complex component rrp40 isoform X3
           [Theobroma cacao]
 gb|EOY20707.1| PNAS-3 related isoform 4 [Theobroma cacao]
          Length = 211

 Score = 67.4 bits (163), Expect(2) = 1e-12
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFL+DIKGP LAFLPVLAFEGG+RRNIPKFE+G
Sbjct: 53  GIVVDSKADNFLIDIKGPVLAFLPVLAFEGGTRRNIPKFEVG 94



 Score = 33.1 bits (74), Expect(2) = 1e-12
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 117 ASGKAAEFGPLKDGYMFETS 136


>gb|KZM84561.1| hypothetical protein DCAR_028017 [Daucus carota subsp. sativus]
          Length = 207

 Score = 68.9 bits (167), Expect(2) = 1e-12
 Identities = 32/42 (76%), Positives = 35/42 (83%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFL+DIKGPALAFLPVLAFEGG+RRNIPKFE+G
Sbjct: 49  GIVVDSKADNFLIDIKGPALAFLPVLAFEGGTRRNIPKFEVG 90



 Score = 31.6 bits (70), Expect(2) = 1e-12
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLF 250
           A GKAAEFGPL+DG +F
Sbjct: 113 ASGKAAEFGPLKDGYMF 129


>gb|EOY20708.1| PNAS-3 related isoform 5 [Theobroma cacao]
          Length = 201

 Score = 67.4 bits (163), Expect(2) = 1e-12
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFL+DIKGP LAFLPVLAFEGG+RRNIPKFE+G
Sbjct: 53  GIVVDSKADNFLIDIKGPVLAFLPVLAFEGGTRRNIPKFEVG 94



 Score = 33.1 bits (74), Expect(2) = 1e-12
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 117 ASGKAAEFGPLKDGYMFETS 136


>gb|PON93386.1| Exosome complex RNA-binding protein 1/RRP40/RRP [Trema orientalis]
          Length = 291

 Score = 68.6 bits (166), Expect(2) = 1e-12
 Identities = 33/42 (78%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFLVDIKGPALAFLPVLAFEGG+RRNIPKFE G
Sbjct: 82  GIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAG 123



 Score = 31.6 bits (70), Expect(2) = 1e-12
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLF 250
           A GKAAEFGPL+DG +F
Sbjct: 146 ASGKAAEFGPLKDGYMF 162


>gb|PON73778.1| Exosome complex RNA-binding protein 1/RRP40/RRP [Parasponia
           andersonii]
          Length = 259

 Score = 68.6 bits (166), Expect(2) = 1e-12
 Identities = 33/42 (78%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFLVDIKGPALAFLPVLAFEGG+RRNIPKFE G
Sbjct: 82  GIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAG 123



 Score = 31.6 bits (70), Expect(2) = 1e-12
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLF 250
           A GKAAEFGPL+DG +F
Sbjct: 146 ASGKAAEFGPLKDGYMF 162


>ref|XP_008806895.1| PREDICTED: putative exosome complex component rrp40 [Phoenix
           dactylifera]
          Length = 242

 Score = 67.0 bits (162), Expect(2) = 1e-12
 Identities = 32/42 (76%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFLVDIKGP LAFLPVLAFEGG+RRNIPKFE+G
Sbjct: 84  GIVVDSKPDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVG 125



 Score = 33.1 bits (74), Expect(2) = 1e-12
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 148 ASGKAAEFGPLKDGYMFETS 167


>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 isoform X1
           [Vitis vinifera]
 emb|CBI15022.3| unnamed protein product, partial [Vitis vinifera]
          Length = 237

 Score = 68.6 bits (166), Expect(2) = 1e-12
 Identities = 33/42 (78%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFLVDIKGPALAFLPVLAFEGG+RRNIPKFE G
Sbjct: 79  GIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAG 120



 Score = 31.6 bits (70), Expect(2) = 1e-12
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLF 250
           A GKAAEFGPL+DG +F
Sbjct: 143 ASGKAAEFGPLKDGYMF 159


>gb|OMO81471.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 [Corchorus
           capsularis]
          Length = 240

 Score = 66.6 bits (161), Expect(2) = 2e-12
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    N L+DIKGPALAFLPVLAFEGG+RRNIPKFE+G
Sbjct: 82  GIVVDSKADNLLIDIKGPALAFLPVLAFEGGTRRNIPKFEVG 123



 Score = 33.1 bits (74), Expect(2) = 2e-12
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 146 ASGKAAEFGPLKDGYMFETS 165


>ref|XP_016721111.1| PREDICTED: putative exosome complex component rrp40 [Gossypium
           hirsutum]
          Length = 240

 Score = 66.6 bits (161), Expect(2) = 2e-12
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFL+DIKGPA+ FLPVLAFEGG+RRNIPKFE+G
Sbjct: 82  GIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKFEVG 123



 Score = 33.1 bits (74), Expect(2) = 2e-12
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 146 ASGKAAEFGPLKDGYMFETS 165


>ref|XP_016666803.1| PREDICTED: putative exosome complex component rrp40 isoform X2
           [Gossypium hirsutum]
 ref|XP_017635430.1| PREDICTED: putative exosome complex component rrp40 isoform X2
           [Gossypium arboreum]
          Length = 240

 Score = 66.6 bits (161), Expect(2) = 2e-12
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFL+DIKGPA+ FLPVLAFEGG+RRNIPKFE+G
Sbjct: 82  GIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKFEVG 123



 Score = 33.1 bits (74), Expect(2) = 2e-12
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 146 ASGKAAEFGPLKDGYMFETS 165


>ref|XP_012478610.1| PREDICTED: putative exosome complex component rrp40 isoform X1
           [Gossypium raimondii]
 gb|KJB30309.1| hypothetical protein B456_005G137000 [Gossypium raimondii]
          Length = 240

 Score = 66.6 bits (161), Expect(2) = 2e-12
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFL+DIKGPA+ FLPVLAFEGG+RRNIPKFE+G
Sbjct: 82  GIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKFEVG 123



 Score = 33.1 bits (74), Expect(2) = 2e-12
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 146 ASGKAAEFGPLKDGYMFETS 165


>ref|XP_012478611.1| PREDICTED: putative exosome complex component rrp40 isoform X2
           [Gossypium raimondii]
 gb|KJB30310.1| hypothetical protein B456_005G137000 [Gossypium raimondii]
          Length = 202

 Score = 66.6 bits (161), Expect(2) = 2e-12
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = -1

Query: 419 GCYRDDDLQNFLVDIKGPALAFLPVLAFEGGSRRNIPKFELG 294
           G   D    NFL+DIKGPA+ FLPVLAFEGG+RRNIPKFE+G
Sbjct: 82  GIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKFEVG 123



 Score = 33.1 bits (74), Expect(2) = 2e-12
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 300 ARGKAAEFGPLEDGLLFYTN 241
           A GKAAEFGPL+DG +F T+
Sbjct: 146 ASGKAAEFGPLKDGYMFETS 165