BLASTX nr result

ID: Acanthopanax24_contig00022225 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00022225
         (583 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017238206.1| PREDICTED: squamosa promoter-binding-like pr...    87   8e-17
ref|XP_010250660.1| PREDICTED: teosinte glume architecture 1-lik...    69   4e-10

>ref|XP_017238206.1| PREDICTED: squamosa promoter-binding-like protein 13A [Daucus
           carota subsp. sativus]
 ref|XP_017238207.1| PREDICTED: squamosa promoter-binding-like protein 13A [Daucus
           carota subsp. sativus]
 ref|XP_017238208.1| PREDICTED: squamosa promoter-binding-like protein 13A [Daucus
           carota subsp. sativus]
 gb|KZN02570.1| hypothetical protein DCAR_011324 [Daucus carota subsp. sativus]
          Length = 381

 Score = 87.4 bits (215), Expect = 8e-17
 Identities = 51/109 (46%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
 Frame = -1

Query: 583 GSSESNCGHQLLSNKWTHLEESKRALSLLSARQTQIPEKSMSPLG-QQDIIHLNHPTGTS 407
           G+S SNC + ++S+K THLEES  ALSLLS  Q Q  +  M+P   Q D  H + PTG +
Sbjct: 263 GTSASNCRNIIVSDKLTHLEESTCALSLLSTNQIQAAKTIMNPSAYQHDAFHSSQPTGIN 322

Query: 406 LQFNELDPYSNPQAMEDKALDAVLNPDTSNMYEHS-DGIFHVGSEELLE 263
           LQF+E+ PYS P+ MEDK + A    D +N+++ S +GI  + S EL E
Sbjct: 323 LQFDEMYPYSYPRIMEDKPIRAGAISDGNNIFDCSINGISQLCSNELYE 371


>ref|XP_010250660.1| PREDICTED: teosinte glume architecture 1-like [Nelumbo nucifera]
 ref|XP_010250661.1| PREDICTED: teosinte glume architecture 1-like [Nelumbo nucifera]
 ref|XP_010250662.1| PREDICTED: teosinte glume architecture 1-like [Nelumbo nucifera]
          Length = 395

 Score = 68.6 bits (166), Expect = 4e-10
 Identities = 45/118 (38%), Positives = 60/118 (50%)
 Frame = -1

Query: 580 SSESNCGHQLLSNKWTHLEESKRALSLLSARQTQIPEKSMSPLGQQDIIHLNHPTGTSLQ 401
           SSES  G ++ SN  T + +S  ALSLLS+   Q    SM+ + Q D I +  P    LQ
Sbjct: 278 SSESEGGRKMFSNGLTRVIDSDCALSLLSSPPMQSSGISMNHVVQPDPIPMAQPLVPVLQ 337

Query: 400 FNELDPYSNPQAMEDKALDAVLNPDTSNMYEHSDGIFHVGSEELLETRASQLLSFSWK 227
           +N +  Y   Q MED+   +VL PD SN   H  G+F +G          Q L FSW+
Sbjct: 338 YNGIGRYPCSQGMEDEQGGSVLAPDASNADLHCHGVFQLGPYGSDRNGGPQTLPFSWE 395


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