BLASTX nr result

ID: Acanthopanax24_contig00021980 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00021980
         (489 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZM95628.1| hypothetical protein DCAR_018870 [Daucus carota s...    74   3e-12
gb|KZM88395.1| hypothetical protein DCAR_025470 [Daucus carota s...    68   2e-10

>gb|KZM95628.1| hypothetical protein DCAR_018870 [Daucus carota subsp. sativus]
          Length = 405

 Score = 73.6 bits (179), Expect = 3e-12
 Identities = 47/130 (36%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
 Frame = -2

Query: 488 TNLTTSLMWQHNEQAATREMPWQVSSELNLHIP-DHHGLFGSTTMTTEPWQLSGADTQ-V 315
           T++T++++WQ      +  MPWQ +S+LN+HIP D +  FG +   T PWQ SGA TQ  
Sbjct: 255 TDITSAMVWQQQ----SNYMPWQAASDLNMHIPQDQNAFFGDS--PTLPWQFSGASTQSA 308

Query: 314 VVDHHLS-YAGGTRIMYQLPTGNKINDNVDMMLDMPPYVSQMNXXXXXXXXXXXXXXGRT 138
           ++D H+S Y        QL  GNK+N  +DMM +  P    +                 T
Sbjct: 309 MIDQHMSHYTDSNYFNNQLLNGNKMNGKMDMMSEYIPVTYGVADQVVNEAELTVCGGVST 368

Query: 137 PGIWPLDQQF 108
             IW  DQQF
Sbjct: 369 --IWSPDQQF 376


>gb|KZM88395.1| hypothetical protein DCAR_025470 [Daucus carota subsp. sativus]
          Length = 406

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
 Frame = -2

Query: 488 TNLTTSLMWQHNEQAATREMPWQVSSELNLHIPDHHGLF--GSTTMTTEPWQLSGADTQ- 318
           T++T+S++WQ        +MPWQ SS+LN+HIP     F   STTMTT PWQ SG  TQ 
Sbjct: 256 TDITSSMVWQQQPN----DMPWQPSSDLNMHIPQDQNAFFTNSTTMTTLPWQFSGTGTQS 311

Query: 317 VVVDHHLS-YAGGTRIMY---QLPTGNKIND 237
            ++DH +S Y  G  + Y   QL   NK+++
Sbjct: 312 AMIDHQMSHYTDG--LCYNNQQLSNSNKMSE 340


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