BLASTX nr result

ID: Acanthopanax24_contig00021925 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00021925
         (653 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017235194.1| PREDICTED: transcription factor GTE10-like i...    76   2e-12
ref|XP_017235193.1| PREDICTED: transcription factor GTE10-like i...    76   2e-12
ref|XP_017230245.1| PREDICTED: transcription factor GTE9 [Daucus...    71   1e-10

>ref|XP_017235194.1| PREDICTED: transcription factor GTE10-like isoform X2 [Daucus
           carota subsp. sativus]
          Length = 601

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/87 (44%), Positives = 55/87 (63%)
 Frame = +3

Query: 171 RSEACDISHQLWMNDECGHSISLNGNEKSTMKKSHNFVRQTLDNPKLYAADNLKVRSPVQ 350
           +S + ++  Q +MN++C  +IS++GN  STMKKSH       D+  LY AD+  V SP Q
Sbjct: 26  KSGSSEVRKQTFMNEDCAQNISVDGNRGSTMKKSHEAAPHASDSLILYGADSSNVASPGQ 85

Query: 351 RSCKRGLTGILDFQEQKRRKMDCSVKQ 431
            S KRGL  ++D    KR+KMD S+KQ
Sbjct: 86  SSRKRGLLRVIDSAMNKRQKMDPSLKQ 112


>ref|XP_017235193.1| PREDICTED: transcription factor GTE10-like isoform X1 [Daucus
           carota subsp. sativus]
 gb|KZN07079.1| hypothetical protein DCAR_007916 [Daucus carota subsp. sativus]
          Length = 602

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/87 (44%), Positives = 55/87 (63%)
 Frame = +3

Query: 171 RSEACDISHQLWMNDECGHSISLNGNEKSTMKKSHNFVRQTLDNPKLYAADNLKVRSPVQ 350
           +S + ++  Q +MN++C  +IS++GN  STMKKSH       D+  LY AD+  V SP Q
Sbjct: 26  KSGSSEVRKQTFMNEDCAQNISVDGNRGSTMKKSHEAAPHASDSLILYGADSSNVASPGQ 85

Query: 351 RSCKRGLTGILDFQEQKRRKMDCSVKQ 431
            S KRGL  ++D    KR+KMD S+KQ
Sbjct: 86  SSRKRGLLRVIDSAMNKRQKMDPSLKQ 112


>ref|XP_017230245.1| PREDICTED: transcription factor GTE9 [Daucus carota subsp. sativus]
 ref|XP_017230246.1| PREDICTED: transcription factor GTE9 [Daucus carota subsp. sativus]
 gb|KZN11298.1| hypothetical protein DCAR_003954 [Daucus carota subsp. sativus]
          Length = 586

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/112 (35%), Positives = 64/112 (57%)
 Frame = +3

Query: 96  MTVTDXXXXXXXXXXXXXXXIEVEPRSEACDISHQLWMNDECGHSISLNGNEKSTMKKSH 275
           MTV D                EV  ++ +C+ S QLW+ ++C  ++SL+GN++S  K+S 
Sbjct: 1   MTVQDSLPKPRLKIKFSCRPTEVVLKTGSCEASKQLWVKEDCSQNVSLDGNKESMRKESR 60

Query: 276 NFVRQTLDNPKLYAADNLKVRSPVQRSCKRGLTGILDFQEQKRRKMDCSVKQ 431
             V ++ D+ KLY AD++K     Q S KRG + ++D    KR+KMD S+K+
Sbjct: 61  KAVPRSSDSLKLYGADSVK-DGFTQSSLKRGPSEVIDSVLNKRQKMDRSLKR 111


Top