BLASTX nr result
ID: Acanthopanax24_contig00021909
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00021909
(804 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017226448.1| PREDICTED: cleavage and polyadenylation spec... 264 1e-80
ref|XP_023904094.1| cleavage and polyadenylation specificity fac... 232 3e-68
gb|POE45696.1| cleavage and polyadenylation specificity factor s... 231 1e-67
ref|XP_023904095.1| cleavage and polyadenylation specificity fac... 230 1e-67
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec... 222 2e-64
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec... 222 2e-64
ref|XP_016450099.1| PREDICTED: uncharacterized protein LOC107774... 210 7e-64
ref|XP_008389756.1| PREDICTED: cleavage and polyadenylation spec... 218 5e-63
emb|CDP13267.1| unnamed protein product [Coffea canephora] 217 2e-62
ref|XP_008221952.1| PREDICTED: RNA-binding motif protein, X chro... 215 6e-62
ref|XP_015894525.1| PREDICTED: cleavage and polyadenylation spec... 214 2e-61
ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation spec... 213 3e-61
ref|XP_021818512.1| cleavage and polyadenylation specificity fac... 213 5e-61
ref|XP_019176127.1| PREDICTED: cleavage and polyadenylation spec... 211 1e-60
gb|KVH88949.1| Nucleotide-binding, alpha-beta plait [Cynara card... 211 3e-60
ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation spec... 210 5e-60
ref|XP_020426099.1| cleavage and polyadenylation specificity fac... 210 5e-60
ref|XP_019231531.1| PREDICTED: cleavage and polyadenylation spec... 209 9e-60
ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation spec... 207 5e-59
dbj|GAY43963.1| hypothetical protein CUMW_078630 [Citrus unshiu] 207 1e-58
>ref|XP_017226448.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Daucus carota subsp. sativus]
Length = 645
Score = 264 bits (675), Expect = 1e-80
Identities = 133/232 (57%), Positives = 160/232 (68%), Gaps = 9/232 (3%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD +AEEQLDYE+EEYG QKMQYHGGGAIS NDVNVG+GFLQ
Sbjct: 1 MDPLAEEQLDYEEEEYGAPQKMQYHGGGAISALAEDENIGEDDEYDDLYNDVNVGDGFLQ 60
Query: 315 LQRSEVPGPSIGVS-NGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQ 491
QRSE GPS G + NGGFQTQK +VPEPR EN++P+E ++HG+ DGKYT+ G+ FP+
Sbjct: 61 FQRSEASGPSAGGAVNGGFQTQKATVPEPRPENILPKEANIHGVPNDGKYTNTGVPFPDP 120
Query: 492 KERLTTEGGP--------QKGIAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMSGKVAN 647
KERL TE P QK +AP +DAQ ++GFRG PVAQ G +PVDMSGKV N
Sbjct: 121 KERLPTEMVPNIGSNNTSQKSVAPGTIHDAQASNMGFRGPAPVAQNTGLNPVDMSGKVGN 180
Query: 648 DSLPLQNPGAGVPRVVSQMPSNQMNMNVNVNRSIVNDSQIRPAVENGATMLF 803
+ +P NP GVP+ VSQ+P N N+N N+NR I ND+ IRPA +NGATMLF
Sbjct: 181 EPVPSHNPNRGVPQGVSQVPPNHSNVNANMNRQIANDNPIRPAGDNGATMLF 232
>ref|XP_023904094.1| cleavage and polyadenylation specificity factor subunit 6 isoform
X1 [Quercus suber]
Length = 658
Score = 232 bits (592), Expect = 3e-68
Identities = 122/237 (51%), Positives = 150/237 (63%), Gaps = 14/237 (5%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD +AEEQ+DYEDEEYGG+QK+QY G GAI NDVNVGEGFLQ
Sbjct: 1 MDPVAEEQIDYEDEEYGGAQKLQYQGSGAIPALADDELMGEDDDYDDLYNDVNVGEGFLQ 60
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
L RSE P P GV NGG QTQKT VPE R E VV QE+ + G++ +GKY++AG+ +PEQK
Sbjct: 61 LHRSEAPLPPGGVGNGGLQTQKTDVPEQRVEAVVAQEMGIPGVSVEGKYSNAGVHYPEQK 120
Query: 495 ERLTTEGGPQKGIA--PD------------MTNDAQTLSLGFRGSVPVAQKIGSDPVDMS 632
E + P+ G + PD MT+D Q ++ F+GS V G DP DM
Sbjct: 121 EGSSAVKAPEMGSSSYPDGSSVSHRGRVVEMTHDPQFRNMAFQGSTSVPPNSGVDPSDMP 180
Query: 633 GKVANDSLPLQNPGAGVPRVVSQMPSNQMNMNVNVNRSIVNDSQIRPAVENGATMLF 803
GK+ N+ +P+ N G PR V QMPSNQ+N+N NVN I+N+SQIRP VENG TMLF
Sbjct: 181 GKIPNEPMPVLNSATGGPRGVQQMPSNQINVNANVNHPIINESQIRPPVENGQTMLF 237
>gb|POE45696.1| cleavage and polyadenylation specificity factor subunit [Quercus
suber]
Length = 670
Score = 231 bits (588), Expect = 1e-67
Identities = 121/236 (51%), Positives = 149/236 (63%), Gaps = 14/236 (5%)
Frame = +3
Query: 138 DHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQL 317
+ MAEEQ+DYEDEEYGG+QK+QY G GAI NDVNVGEGFLQL
Sbjct: 14 EKMAEEQIDYEDEEYGGAQKLQYQGSGAIPALADDELMGEDDDYDDLYNDVNVGEGFLQL 73
Query: 318 QRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQKE 497
RSE P P GV NGG QTQKT VPE R E VV QE+ + G++ +GKY++AG+ +PEQKE
Sbjct: 74 HRSEAPLPPGGVGNGGLQTQKTDVPEQRVEAVVAQEMGIPGVSVEGKYSNAGVHYPEQKE 133
Query: 498 RLTTEGGPQKGIA--PD------------MTNDAQTLSLGFRGSVPVAQKIGSDPVDMSG 635
+ P+ G + PD MT+D Q ++ F+GS V G DP DM G
Sbjct: 134 GSSAVKAPEMGSSSYPDGSSVSHRGRVVEMTHDPQFRNMAFQGSTSVPPNSGVDPSDMPG 193
Query: 636 KVANDSLPLQNPGAGVPRVVSQMPSNQMNMNVNVNRSIVNDSQIRPAVENGATMLF 803
K+ N+ +P+ N G PR V QMPSNQ+N+N NVN I+N+SQIRP VENG TMLF
Sbjct: 194 KIPNEPMPVLNSATGGPRGVQQMPSNQINVNANVNHPIINESQIRPPVENGQTMLF 249
>ref|XP_023904095.1| cleavage and polyadenylation specificity factor subunit 6 isoform
X2 [Quercus suber]
Length = 655
Score = 230 bits (587), Expect = 1e-67
Identities = 121/234 (51%), Positives = 148/234 (63%), Gaps = 14/234 (5%)
Frame = +3
Query: 144 MAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQLQR 323
MAEEQ+DYEDEEYGG+QK+QY G GAI NDVNVGEGFLQL R
Sbjct: 1 MAEEQIDYEDEEYGGAQKLQYQGSGAIPALADDELMGEDDDYDDLYNDVNVGEGFLQLHR 60
Query: 324 SEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQKERL 503
SE P P GV NGG QTQKT VPE R E VV QE+ + G++ +GKY++AG+ +PEQKE
Sbjct: 61 SEAPLPPGGVGNGGLQTQKTDVPEQRVEAVVAQEMGIPGVSVEGKYSNAGVHYPEQKEGS 120
Query: 504 TTEGGPQKGIA--PD------------MTNDAQTLSLGFRGSVPVAQKIGSDPVDMSGKV 641
+ P+ G + PD MT+D Q ++ F+GS V G DP DM GK+
Sbjct: 121 SAVKAPEMGSSSYPDGSSVSHRGRVVEMTHDPQFRNMAFQGSTSVPPNSGVDPSDMPGKI 180
Query: 642 ANDSLPLQNPGAGVPRVVSQMPSNQMNMNVNVNRSIVNDSQIRPAVENGATMLF 803
N+ +P+ N G PR V QMPSNQ+N+N NVN I+N+SQIRP VENG TMLF
Sbjct: 181 PNEPMPVLNSATGGPRGVQQMPSNQINVNANVNHPIINESQIRPPVENGQTMLF 234
>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_010650883.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_010650886.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_019075332.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
Length = 650
Score = 222 bits (565), Expect = 2e-64
Identities = 120/237 (50%), Positives = 149/237 (62%), Gaps = 14/237 (5%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD MAEEQLDYEDEEYGG+QKM + GGGAIS NDVNVGEGFLQ
Sbjct: 1 MDPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
+ RSE P PS ++ G FQ KT VP + E Q + + G++ +GKY++ F E+K
Sbjct: 61 MHRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNP--HFHEKK 118
Query: 495 ERLTTEGGP--------------QKGIAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMS 632
E GP QKG +MT+D Q +LGF+GS P+ QK G++P D+
Sbjct: 119 EGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVH 178
Query: 633 GKVANDSLPLQNPGAGVPRVVSQMPSNQMNMNVNVNRSIVNDSQIRPAVENGATMLF 803
GK+AN+S P+ N G G PR V QM SNQM MNVNVNR +VN++QIRPAV+NGATMLF
Sbjct: 179 GKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLF 235
>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X1 [Vitis vinifera]
Length = 656
Score = 222 bits (565), Expect = 2e-64
Identities = 120/237 (50%), Positives = 149/237 (62%), Gaps = 14/237 (5%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD MAEEQLDYEDEEYGG+QKM + GGGAIS NDVNVGEGFLQ
Sbjct: 7 MDPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQ 66
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
+ RSE P PS ++ G FQ KT VP + E Q + + G++ +GKY++ F E+K
Sbjct: 67 MHRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNP--HFHEKK 124
Query: 495 ERLTTEGGP--------------QKGIAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMS 632
E GP QKG +MT+D Q +LGF+GS P+ QK G++P D+
Sbjct: 125 EGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVH 184
Query: 633 GKVANDSLPLQNPGAGVPRVVSQMPSNQMNMNVNVNRSIVNDSQIRPAVENGATMLF 803
GK+AN+S P+ N G G PR V QM SNQM MNVNVNR +VN++QIRPAV+NGATMLF
Sbjct: 185 GKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLF 241
>ref|XP_016450099.1| PREDICTED: uncharacterized protein LOC107774946, partial [Nicotiana
tabacum]
Length = 275
Score = 210 bits (535), Expect = 7e-64
Identities = 112/234 (47%), Positives = 146/234 (62%), Gaps = 11/234 (4%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD A+EQLDY DEEYGGS KMQYHGGG I NDVNVGEGFLQ
Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGGGTIPALAEDEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
LQRSE P P + N FQ QK S P+ +A+ + E + G+AT+GKY ++FPEQK
Sbjct: 61 LQRSEAPVPPVDAGNVSFQDQKASFPDAKADGIGSDEAKIPGVATEGKYAGTEVRFPEQK 120
Query: 495 ERLTTEGG-------PQKG--IAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMSGKVAN 647
E G QKG +A +T D+Q + G++GS+ QKIG+DP++M K AN
Sbjct: 121 SGPVVERGTERPADAAQKGRPLAMMLTRDSQVGNSGYQGSIQTTQKIGADPINMPEKNAN 180
Query: 648 DSLPLQNPGAGVPRVVSQMPSNQMNM--NVNVNRSIVNDSQIRPAVENGATMLF 803
++ PL N G G RVV+QMP+NQ++ NVN+N I++++ IRP++ENG TMLF
Sbjct: 181 EATPLVNSGVGGSRVVTQMPTNQLSSSGNVNINSPIISETPIRPSLENGNTMLF 234
>ref|XP_008389756.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Malus domestica]
ref|XP_017192498.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Malus domestica]
Length = 658
Score = 218 bits (556), Expect = 5e-63
Identities = 111/236 (47%), Positives = 147/236 (62%), Gaps = 13/236 (5%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD M +EQ+DYEDEEYGGSQK+QY G GAIS NDVNVGEGF+Q
Sbjct: 1 MDPMGDEQIDYEDEEYGGSQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFMQ 60
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
+ RSE P P GV NGG Q QKT+VPEPRA V Q++ + G++ GKY+ AG QFPEQ
Sbjct: 61 MHRSEAPVPPGGVGNGGLQAQKTNVPEPRARAGVSQDLKIPGVSVQGKYSGAGAQFPEQN 120
Query: 495 E-------RLTTEG------GPQKGIAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMSG 635
+ L + G G QKG +MT+D Q +GF+GS + +G D D++G
Sbjct: 121 QPPVAKEPELGSTGYVGGASGSQKGRVMEMTHDTQVRQMGFQGSTTIPPNVGIDSSDITG 180
Query: 636 KVANDSLPLQNPGAGVPRVVSQMPSNQMNMNVNVNRSIVNDSQIRPAVENGATMLF 803
K ++ +P NPG P +Q+P+NQM++ +N NR +VN++QIRP +ENG+ MLF
Sbjct: 181 KGNSEYIPSLNPGTAGPPGAAQIPTNQMSIKINANRPMVNENQIRPPIENGSAMLF 236
>emb|CDP13267.1| unnamed protein product [Coffea canephora]
Length = 655
Score = 217 bits (552), Expect = 2e-62
Identities = 118/237 (49%), Positives = 157/237 (66%), Gaps = 14/237 (5%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD +EQLD+ DEEYGGSQKMQYH GGAI NDVNVGEGFLQ
Sbjct: 1 MDPGGDEQLDFGDEEYGGSQKMQYHRGGAIPALAEDEMINEDDEYDDLYNDVNVGEGFLQ 60
Query: 315 LQ---RSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFP 485
+Q RSE P +GV NGGF + SV +PRAE VV Q +++ AT+GKYT++G++FP
Sbjct: 61 MQQQQRSETPRAPLGVGNGGFPAPRASVQDPRAETVVTQGVNIPRSATEGKYTNSGVRFP 120
Query: 486 EQKERLTTEGG-------PQKGIAPDMTNDAQTLSLGFRGSVPVA--QKIGSDPVDMSGK 638
+QK L ++ G QKG AP++ +++Q +LG++GS+ VA QK+G + +DMSGK
Sbjct: 121 DQKSGLASDVGALPGTDASQKGRAPEIIHNSQAGNLGYQGSMAVAMSQKVGVESLDMSGK 180
Query: 639 VANDSLPLQNPGAGVPRVVSQMPSNQMNMNVNVN--RSIVNDSQIRPAVENGATMLF 803
V + PL NP AG PRV+ Q+P+N M+ + NVN R +V ++Q+RPAVENG TMLF
Sbjct: 181 VTGEPGPLLNPVAGAPRVIPQVPANHMSSSSNVNSIRPVVTENQVRPAVENGNTMLF 237
>ref|XP_008221952.1| PREDICTED: RNA-binding motif protein, X chromosome [Prunus mume]
Length = 647
Score = 215 bits (548), Expect = 6e-62
Identities = 115/237 (48%), Positives = 148/237 (62%), Gaps = 14/237 (5%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD MAEEQ+DYEDEEYGG+QK+QY G GAIS NDVNVGEGFLQ
Sbjct: 1 MDPMAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
+ RSE P P GV NGG Q QKT V E R + V QE + G++ GKY+SA QFPEQ+
Sbjct: 61 MHRSEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSSAVAQFPEQQ 120
Query: 495 ER--------LTTEG------GPQKGIAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMS 632
++ L + G G QKG A +M++D Q +GF+GS + IG D D++
Sbjct: 121 DQPPVAKEPELGSTGYVGGASGSQKGRAMEMSHDTQVRHMGFQGSTTMPPNIGGDSSDIT 180
Query: 633 GKVANDSLPLQNPGAGVPRVVSQMPSNQMNMNVNVNRSIVNDSQIRPAVENGATMLF 803
GK A +S+P N G P V+QMP+NQ+++ VN NR + N++Q+RP VENG+TMLF
Sbjct: 181 GKTALESVPSMNSGTAGPTGVTQMPTNQISIKVNANRPMFNENQVRPTVENGSTMLF 237
>ref|XP_015894525.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Ziziphus jujuba]
Length = 659
Score = 214 bits (545), Expect = 2e-61
Identities = 111/236 (47%), Positives = 141/236 (59%), Gaps = 13/236 (5%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD MAEEQ+DY+DEEYGG+QK+QY G G I NDVNVGEGFLQ
Sbjct: 1 MDPMAEEQIDYDDEEYGGAQKLQYQGSGTIPALADEELMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
L RSE P P GV NGG Q QK PEPR E QE+++ G++ GKY G QFPEQK
Sbjct: 61 LHRSEAPQPPTGVGNGGHQAQKIDGPEPREEVGGSQELNIPGVSVQGKYAGIGAQFPEQK 120
Query: 495 ERLTTEGGP-------------QKGIAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMSG 635
E + G QKG ++ +D Q +GF+GS + IG D +++G
Sbjct: 121 EGPVVDKGSEARSMGYPDGASTQKGRVMEVNHDTQVRHMGFQGSTSITPSIGVDSSNITG 180
Query: 636 KVANDSLPLQNPGAGVPRVVSQMPSNQMNMNVNVNRSIVNDSQIRPAVENGATMLF 803
K ++ +P N G+ PR QMP+NQMN NVN++R +VN++QIRP +ENGATMLF
Sbjct: 181 KTVSEPVPTLNSGSAGPRGGPQMPANQMNANVNIHRPMVNENQIRPPIENGATMLF 236
>ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Nicotiana tomentosiformis]
Length = 648
Score = 213 bits (543), Expect = 3e-61
Identities = 113/234 (48%), Positives = 147/234 (62%), Gaps = 11/234 (4%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD A+EQLDY DEEYGGS KMQYHGGG I NDVNVGEGFLQ
Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGGGTIPALAEDEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
LQRSE P P + NG F+ QK S P+ +A+ + E + G+AT+GKY ++FPEQK
Sbjct: 61 LQRSEAPVPPVDAGNGSFRDQKASFPDAKADGIGSDEAKIPGVATEGKYAGTEVRFPEQK 120
Query: 495 ERLTTEGG-------PQKG--IAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMSGKVAN 647
E G QKG +A +T D+Q + G++GS+P QKIG+DP++M K AN
Sbjct: 121 SGPVAERGTERPADAAQKGRPLAMMLTGDSQMGNSGYQGSIPTTQKIGADPINMPEKNAN 180
Query: 648 DSLPLQNPGAGVPRVVSQMPSNQMNM--NVNVNRSIVNDSQIRPAVENGATMLF 803
++ PL N G G RVV QMP+NQ++ NVN+N I++++ IRP++ENG TMLF
Sbjct: 181 EATPLVNSGVGGSRVVPQMPTNQLSSSGNVNMNSPIISETPIRPSLENGNTMLF 234
>ref|XP_021818512.1| cleavage and polyadenylation specificity factor subunit 6 isoform
X1 [Prunus avium]
ref|XP_021818513.1| cleavage and polyadenylation specificity factor subunit 6 isoform
X2 [Prunus avium]
Length = 660
Score = 213 bits (542), Expect = 5e-61
Identities = 116/237 (48%), Positives = 147/237 (62%), Gaps = 14/237 (5%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD MAEEQ+DYEDEEYGG+QK+QY G GAIS NDVNVGEGFLQ
Sbjct: 1 MDPMAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
+ RSE P P GV NGG Q QKT V E R + V QE + G + GKY+SA QFPEQ+
Sbjct: 61 MHRSEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKISGGSVQGKYSSAVAQFPEQQ 120
Query: 495 ER--------LTTEG------GPQKGIAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMS 632
++ L + G G QKG A +M++D Q +GF+GS + IG D D++
Sbjct: 121 DQPPVAKEPELGSTGYVGGASGSQKGRAMEMSHDTQVRHMGFQGSTTMPPNIGGDSSDIT 180
Query: 633 GKVANDSLPLQNPGAGVPRVVSQMPSNQMNMNVNVNRSIVNDSQIRPAVENGATMLF 803
GK A +S+P N G P V+QMP+NQ+++ VN NR + N++QIRP VENG+TMLF
Sbjct: 181 GKTALESVPSMNSGTAGPTGVTQMPTNQISIKVNANRPMFNENQIRPPVENGSTMLF 237
>ref|XP_019176127.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Ipomoea nil]
ref|XP_019176128.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Ipomoea nil]
ref|XP_019176129.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Ipomoea nil]
Length = 638
Score = 211 bits (538), Expect = 1e-60
Identities = 115/232 (49%), Positives = 149/232 (64%), Gaps = 9/232 (3%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD A++QLD++DEEYGGSQKMQY+GGG I NDVNVGEGFLQ
Sbjct: 1 MDPTADDQLDFDDEEYGGSQKMQYNGGGTIPALAEEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
LQRSE P P V NGG Q + S+ EPRA + QE++ G+A S+GL+FPEQK
Sbjct: 61 LQRSEAPKPPDTVGNGGSQAPENSMSEPRAGAITSQEMNP-GVA------SSGLRFPEQK 113
Query: 495 ERLTTEGGP-------QKGIAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMSGKVANDS 653
LTTE GP +K P MT D Q ++GF+GSVP++ + GSDP D+SG ++S
Sbjct: 114 SGLTTERGPNQAADAPEKARPPSMTRDPQVGNMGFQGSVPMSHRTGSDPADISGNAVSES 173
Query: 654 LPLQNPGAGVPRVVSQMPSNQMNMNVNVNRS--IVNDSQIRPAVENGATMLF 803
+PLQN AG R MP++QMN N N+N + ++N++Q+RPA+ENG TMLF
Sbjct: 174 MPLQNSAAGGSRGAPLMPAHQMNSNANINMNSPMMNENQMRPAIENGNTMLF 225
>gb|KVH88949.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 636
Score = 211 bits (536), Expect = 3e-60
Identities = 116/223 (52%), Positives = 142/223 (63%), Gaps = 3/223 (1%)
Frame = +3
Query: 144 MAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQLQR 323
MAEEQLDY DEE+GGSQKMQYHG GAI NDVNVGEGFLQ+QR
Sbjct: 1 MAEEQLDYGDEEFGGSQKMQYHGDGAIPALADDEIGGEDDEYDDLYNDVNVGEGFLQMQR 60
Query: 324 SEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQKERL 503
SE PS V NGGF QK +V E R E + Q+I++ G+A +G Y S GL+ P+ KE +
Sbjct: 61 SEAL-PSANVGNGGFHDQKVNVQEARPEAMPSQDINIPGVAAEGVYPSTGLRLPDNKEGM 119
Query: 504 TTEGGPQKGIAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMSGKVANDSLPLQNPGAGV 683
T + QK + P +TND Q +S+GFRGS+ V QK DP+ MSG + N+ P+ N AG
Sbjct: 120 TVDL-LQKRMVPQVTNDVQAVSMGFRGSITVPQKPSVDPISMSGAITNEPAPMLNSNAGH 178
Query: 684 P-RVVSQMPSNQM--NMNVNVNRSIVNDSQIRPAVENGATMLF 803
V QMP NQM N NVN+ R +VN++QIRP ENGAT LF
Sbjct: 179 SIGGVPQMPGNQMGANANVNMTRPVVNENQIRPPAENGATTLF 221
>ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Nicotiana sylvestris]
Length = 648
Score = 210 bits (535), Expect = 5e-60
Identities = 112/234 (47%), Positives = 146/234 (62%), Gaps = 11/234 (4%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD A+EQLDY DEEYGGS KMQYHGGG I NDVNVGEGFLQ
Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGGGTIPALAEDEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
LQRSE P P + N FQ QK S P+ +A+ + E + G+AT+GKY ++FPEQK
Sbjct: 61 LQRSEAPVPPVDAGNVSFQDQKASFPDAKADGIGSDEAKIPGVATEGKYAGTEVRFPEQK 120
Query: 495 ERLTTEGG-------PQKG--IAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMSGKVAN 647
E G QKG +A +T D+Q + G++GS+ QKIG+DP++M K AN
Sbjct: 121 SGPVVERGTERPADAAQKGRPLAMMLTRDSQVGNSGYQGSIQTTQKIGADPINMPEKNAN 180
Query: 648 DSLPLQNPGAGVPRVVSQMPSNQMNM--NVNVNRSIVNDSQIRPAVENGATMLF 803
++ PL N G G RVV+QMP+NQ++ NVN+N I++++ IRP++ENG TMLF
Sbjct: 181 EATPLVNSGVGGSRVVTQMPTNQLSSSGNVNINSPIISETPIRPSLENGNTMLF 234
>ref|XP_020426099.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
persica]
ref|XP_020426104.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
persica]
ref|XP_020426109.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
persica]
gb|ONI30252.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30253.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30254.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30255.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30256.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30257.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
Length = 660
Score = 210 bits (535), Expect = 5e-60
Identities = 114/237 (48%), Positives = 146/237 (61%), Gaps = 14/237 (5%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD MAEEQ+DYEDEEYGG+QK+QY G GAIS NDVNV EGFLQ
Sbjct: 1 MDPMAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQ 60
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
+ RSE P P GV NGG Q QKT V E R + V QE + G++ GKY+SA QFPEQ+
Sbjct: 61 MHRSEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSSAVAQFPEQQ 120
Query: 495 ER--------LTTEG------GPQKGIAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMS 632
+ L + G G QKG A +M++D Q +GF+GS + +G D D++
Sbjct: 121 GQPPVAKEPELGSTGYVGGASGSQKGRAMEMSHDTQVRHMGFQGSTTMPPNVGGDSSDIT 180
Query: 633 GKVANDSLPLQNPGAGVPRVVSQMPSNQMNMNVNVNRSIVNDSQIRPAVENGATMLF 803
GK A +S+P N G P V+QMP+NQ+++ VN NR + N++QIRP VENG+TMLF
Sbjct: 181 GKTALESVPSMNSGTAGPTGVTQMPTNQISIKVNANRPMFNENQIRPPVENGSTMLF 237
>ref|XP_019231531.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Nicotiana attenuata]
gb|OIT28678.1| hypothetical protein A4A49_35854 [Nicotiana attenuata]
Length = 648
Score = 209 bits (533), Expect = 9e-60
Identities = 113/234 (48%), Positives = 146/234 (62%), Gaps = 11/234 (4%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD A+EQLDY DEEYGGS KMQYHGGG I NDVNVGEGFLQ
Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGGGTIPALAEDEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
LQRSE P P + N FQ QK S P+ +A+ + E + +AT+GKY ++FPEQK
Sbjct: 61 LQRSEAPVPPVDAGNVSFQDQKASFPDAKADGIGSDEAKIPCVATEGKYAGTEVRFPEQK 120
Query: 495 -----ERLTTE--GGPQKG--IAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMSGKVAN 647
ER T G QKG +A +T D+Q + G++GS+P QKIG+DP++M K AN
Sbjct: 121 SGPVVERATERPAGAAQKGKPLAMTLTRDSQMGNSGYQGSIPTTQKIGADPINMPEKNAN 180
Query: 648 DSLPLQNPGAGVPRVVSQMPSNQMNM--NVNVNRSIVNDSQIRPAVENGATMLF 803
++ PL N G G R+V QMP+NQ+ NVN+N I++++ IRP++ENG TMLF
Sbjct: 181 EATPLVNSGVGGSRIVPQMPANQLGSSGNVNMNSPIISETPIRPSLENGNTMLF 234
>ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Pyrus x bretschneideri]
Length = 656
Score = 207 bits (528), Expect = 5e-59
Identities = 105/236 (44%), Positives = 145/236 (61%), Gaps = 13/236 (5%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
M+ + EEQ+DYEDEEYGG+ K+QY G GAIS NDVNVGEGF+Q
Sbjct: 1 MEPLGEEQIDYEDEEYGGAHKLQYQGSGAISALADEELMVEDDEFDDLYNDVNVGEGFMQ 60
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
+ RSE P P+ GV NGG Q QKT VPEPR ++ V Q++ + G++ GKY+ AG QFPEQ
Sbjct: 61 MHRSEAPLPTGGVGNGGLQAQKTDVPEPRVQSGVSQDLKIPGVSVQGKYSGAGAQFPEQN 120
Query: 495 E-------RLTTEG------GPQKGIAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMSG 635
+ L + G G QKG DMT+D Q + F+GS + +G D D++G
Sbjct: 121 QPPVAKEPELGSTGYASGASGSQKGRVMDMTHDTQVRHMAFQGSTTMPPNVGVDSSDITG 180
Query: 636 KVANDSLPLQNPGAGVPRVVSQMPSNQMNMNVNVNRSIVNDSQIRPAVENGATMLF 803
K ++ +P NP + P +Q+P+NQM++ +N NR +VN++QIRP +ENG+ LF
Sbjct: 181 KGNSEFVPSLNPASAGPPGATQIPTNQMSIKINANRPMVNENQIRPPIENGSATLF 236
>dbj|GAY43963.1| hypothetical protein CUMW_078630 [Citrus unshiu]
Length = 658
Score = 207 bits (526), Expect = 1e-58
Identities = 109/237 (45%), Positives = 144/237 (60%), Gaps = 14/237 (5%)
Frame = +3
Query: 135 MDHMAEEQLDYEDEEYGGSQKMQYHGGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQ 314
MD MAEEQ+DYE+EEYGG+QKMQY GGGAI NDVNVG+G LQ
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 315 LQRSEVPGPSIGVSNGGFQTQKTSVPEPRAENVVPQEISVHGIATDGKYTSAGLQFPEQK 494
Q+ E P PS GV NG Q +KT VPE + + V Q +V G++ +GKYT+AG FP Q
Sbjct: 61 FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120
Query: 495 ERLTTEGGP--------------QKGIAPDMTNDAQTLSLGFRGSVPVAQKIGSDPVDMS 632
+ P QKG + T+DA ++GF+GS + G DP +M
Sbjct: 121 DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMP 180
Query: 633 GKVANDSLPLQNPGAGVPRVVSQMPSNQMNMNVNVNRSIVNDSQIRPAVENGATMLF 803
G+VAN+ P+ NPGA P+ + +P+NQM +N+NVNR++VN++QIRP +ENG TMLF
Sbjct: 181 GRVANEPAPVLNPGAAGPQ-GALIPANQMGVNINVNRAMVNENQIRPPLENGGTMLF 236