BLASTX nr result
ID: Acanthopanax24_contig00021908
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00021908
(562 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017226448.1| PREDICTED: cleavage and polyadenylation spec... 212 6e-62
ref|XP_023904095.1| cleavage and polyadenylation specificity fac... 188 5e-53
ref|XP_023904094.1| cleavage and polyadenylation specificity fac... 188 5e-53
gb|POE45696.1| cleavage and polyadenylation specificity factor s... 188 6e-53
emb|CDP13267.1| unnamed protein product [Coffea canephora] 180 7e-50
emb|CBI16834.3| unnamed protein product, partial [Vitis vinifera] 172 5e-48
ref|XP_016450099.1| PREDICTED: uncharacterized protein LOC107774... 164 3e-47
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec... 172 5e-47
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec... 172 5e-47
ref|XP_008389756.1| PREDICTED: cleavage and polyadenylation spec... 172 5e-47
gb|KVH88949.1| Nucleotide-binding, alpha-beta plait [Cynara card... 171 2e-46
ref|XP_015894525.1| PREDICTED: cleavage and polyadenylation spec... 170 3e-46
ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation spec... 169 7e-46
ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation spec... 169 1e-45
ref|XP_019176127.1| PREDICTED: cleavage and polyadenylation spec... 166 8e-45
ref|XP_008221952.1| PREDICTED: RNA-binding motif protein, X chro... 164 3e-44
ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation spec... 164 3e-44
ref|XP_019231531.1| PREDICTED: cleavage and polyadenylation spec... 164 5e-44
ref|XP_021818512.1| cleavage and polyadenylation specificity fac... 162 3e-43
dbj|GAY43963.1| hypothetical protein CUMW_078630 [Citrus unshiu] 162 4e-43
>ref|XP_017226448.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Daucus carota subsp. sativus]
Length = 645
Score = 212 bits (539), Expect = 6e-62
Identities = 108/185 (58%), Positives = 131/185 (70%), Gaps = 11/185 (5%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVS-NGGFQTQKTSVPEPRAENVVPQGMSVHGVATD 216
LYNDVNVG GFLQ QRSEA GPS G + NGGFQTQK +VPEPR EN++P+ ++HGV D
Sbjct: 48 LYNDVNVGDGFLQFQRSEASGPSAGGAVNGGFQTQKATVPEPRPENILPKEANIHGVPND 107
Query: 217 GKYTNAGLQFPEQKERLTAE--------GGAQKGIAPDTTNDTQTLSLGFRGSVPVAQKI 372
GKYTN G+ FP+ KERL E +QK +AP T +D Q ++GFRG PVAQ
Sbjct: 108 GKYTNTGVPFPDPKERLPTEMVPNIGSNNTSQKSVAPGTIHDAQASNMGFRGPAPVAQNT 167
Query: 373 GSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQMNV--NVKPPIVNDSQIRPAVENG 546
G +PVDMSGKV N+ +P NP+ GVP+GVSQ+P N NV N+ I ND+ IRPA +NG
Sbjct: 168 GLNPVDMSGKVGNEPVPSHNPNRGVPQGVSQVPPNHSNVNANMNRQIANDNPIRPAGDNG 227
Query: 547 ATMLF 561
ATMLF
Sbjct: 228 ATMLF 232
>ref|XP_023904095.1| cleavage and polyadenylation specificity factor subunit 6 isoform
X2 [Quercus suber]
Length = 655
Score = 188 bits (478), Expect = 5e-53
Identities = 101/190 (53%), Positives = 123/190 (64%), Gaps = 16/190 (8%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQL RSEAP P GV NGG QTQKT VPE R E VV Q M + GV+ +G
Sbjct: 45 LYNDVNVGEGFLQLHRSEAPLPPGGVGNGGLQTQKTDVPEQRVEAVVAQEMGIPGVSVEG 104
Query: 220 KYTNAGLQFPEQKERLTA--------------EGGAQKGIAPDTTNDTQTLSLGFRGSVP 357
KY+NAG+ +PEQKE +A + +G + T+D Q ++ F+GS
Sbjct: 105 KYSNAGVHYPEQKEGSSAVKAPEMGSSSYPDGSSVSHRGRVVEMTHDPQFRNMAFQGSTS 164
Query: 358 VAQKIGSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQMNV--NVKPPIVNDSQIRP 531
V G DP DM GK+ N+ +P+ N + G PRGV QMPSNQ+NV NV PI+N+SQIRP
Sbjct: 165 VPPNSGVDPSDMPGKIPNEPMPVLNSATGGPRGVQQMPSNQINVNANVNHPIINESQIRP 224
Query: 532 AVENGATMLF 561
VENG TMLF
Sbjct: 225 PVENGQTMLF 234
>ref|XP_023904094.1| cleavage and polyadenylation specificity factor subunit 6 isoform
X1 [Quercus suber]
Length = 658
Score = 188 bits (478), Expect = 5e-53
Identities = 101/190 (53%), Positives = 123/190 (64%), Gaps = 16/190 (8%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQL RSEAP P GV NGG QTQKT VPE R E VV Q M + GV+ +G
Sbjct: 48 LYNDVNVGEGFLQLHRSEAPLPPGGVGNGGLQTQKTDVPEQRVEAVVAQEMGIPGVSVEG 107
Query: 220 KYTNAGLQFPEQKERLTA--------------EGGAQKGIAPDTTNDTQTLSLGFRGSVP 357
KY+NAG+ +PEQKE +A + +G + T+D Q ++ F+GS
Sbjct: 108 KYSNAGVHYPEQKEGSSAVKAPEMGSSSYPDGSSVSHRGRVVEMTHDPQFRNMAFQGSTS 167
Query: 358 VAQKIGSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQMNV--NVKPPIVNDSQIRP 531
V G DP DM GK+ N+ +P+ N + G PRGV QMPSNQ+NV NV PI+N+SQIRP
Sbjct: 168 VPPNSGVDPSDMPGKIPNEPMPVLNSATGGPRGVQQMPSNQINVNANVNHPIINESQIRP 227
Query: 532 AVENGATMLF 561
VENG TMLF
Sbjct: 228 PVENGQTMLF 237
>gb|POE45696.1| cleavage and polyadenylation specificity factor subunit [Quercus
suber]
Length = 670
Score = 188 bits (478), Expect = 6e-53
Identities = 101/190 (53%), Positives = 123/190 (64%), Gaps = 16/190 (8%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQL RSEAP P GV NGG QTQKT VPE R E VV Q M + GV+ +G
Sbjct: 60 LYNDVNVGEGFLQLHRSEAPLPPGGVGNGGLQTQKTDVPEQRVEAVVAQEMGIPGVSVEG 119
Query: 220 KYTNAGLQFPEQKERLTA--------------EGGAQKGIAPDTTNDTQTLSLGFRGSVP 357
KY+NAG+ +PEQKE +A + +G + T+D Q ++ F+GS
Sbjct: 120 KYSNAGVHYPEQKEGSSAVKAPEMGSSSYPDGSSVSHRGRVVEMTHDPQFRNMAFQGSTS 179
Query: 358 VAQKIGSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQMNV--NVKPPIVNDSQIRP 531
V G DP DM GK+ N+ +P+ N + G PRGV QMPSNQ+NV NV PI+N+SQIRP
Sbjct: 180 VPPNSGVDPSDMPGKIPNEPMPVLNSATGGPRGVQQMPSNQINVNANVNHPIINESQIRP 239
Query: 532 AVENGATMLF 561
VENG TMLF
Sbjct: 240 PVENGQTMLF 249
>emb|CDP13267.1| unnamed protein product [Coffea canephora]
Length = 655
Score = 180 bits (456), Expect = 7e-50
Identities = 98/190 (51%), Positives = 131/190 (68%), Gaps = 16/190 (8%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQ---RSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVA 210
LYNDVNVG GFLQ+Q RSE P +GV NGGF + SV +PRAE VV QG+++ A
Sbjct: 48 LYNDVNVGEGFLQMQQQQRSETPRAPLGVGNGGFPAPRASVQDPRAETVVTQGVNIPRSA 107
Query: 211 TDGKYTNAGLQFPEQKERLTAEGGA-------QKGIAPDTTNDTQTLSLGFRGSVPVA-- 363
T+GKYTN+G++FP+QK L ++ GA QKG AP+ +++Q +LG++GS+ VA
Sbjct: 108 TEGKYTNSGVRFPDQKSGLASDVGALPGTDASQKGRAPEIIHNSQAGNLGYQGSMAVAMS 167
Query: 364 QKIGSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQM----NVNVKPPIVNDSQIRP 531
QK+G + +DMSGKV + PL NP AG PR + Q+P+N M NVN P+V ++Q+RP
Sbjct: 168 QKVGVESLDMSGKVTGEPGPLLNPVAGAPRVIPQVPANHMSSSSNVNSIRPVVTENQVRP 227
Query: 532 AVENGATMLF 561
AVENG TMLF
Sbjct: 228 AVENGNTMLF 237
>emb|CBI16834.3| unnamed protein product, partial [Vitis vinifera]
Length = 491
Score = 172 bits (436), Expect = 5e-48
Identities = 96/190 (50%), Positives = 122/190 (64%), Gaps = 16/190 (8%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQ+ RSEAP PS ++ G FQ KT VP + E QG+ + GV+ +G
Sbjct: 27 LYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEG 86
Query: 220 KYTNAGLQFPEQKERLTAEGG--------------AQKGIAPDTTNDTQTLSLGFRGSVP 357
KY+N F E+KE A G +QKG + T+DTQ +LGF+GS P
Sbjct: 87 KYSNP--HFHEKKEGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTP 144
Query: 358 VAQKIGSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQ--MNVNVKPPIVNDSQIRP 531
+ QK G++P D+ GK+AN+S P+ N G PR V QM SNQ MNVNV P+VN++QIRP
Sbjct: 145 IPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRP 204
Query: 532 AVENGATMLF 561
AV+NGATMLF
Sbjct: 205 AVDNGATMLF 214
>ref|XP_016450099.1| PREDICTED: uncharacterized protein LOC107774946, partial [Nicotiana
tabacum]
Length = 275
Score = 164 bits (416), Expect = 3e-47
Identities = 90/187 (48%), Positives = 119/187 (63%), Gaps = 13/187 (6%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQLQRSEAP P V N FQ QK S P+ +A+ + + GVAT+G
Sbjct: 48 LYNDVNVGEGFLQLQRSEAPVPPVDAGNVSFQDQKASFPDAKADGIGSDEAKIPGVATEG 107
Query: 220 KYTNAGLQFPEQKERLTAEGG-------AQKG--IAPDTTNDTQTLSLGFRGSVPVAQKI 372
KY ++FPEQK E G AQKG +A T D+Q + G++GS+ QKI
Sbjct: 108 KYAGTEVRFPEQKSGPVVERGTERPADAAQKGRPLAMMLTRDSQVGNSGYQGSIQTTQKI 167
Query: 373 GSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQM----NVNVKPPIVNDSQIRPAVE 540
G+DP++M K AN++ PL N G R V+QMP+NQ+ NVN+ PI++++ IRP++E
Sbjct: 168 GADPINMPEKNANEATPLVNSGVGGSRVVTQMPTNQLSSSGNVNINSPIISETPIRPSLE 227
Query: 541 NGATMLF 561
NG TMLF
Sbjct: 228 NGNTMLF 234
>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_010650883.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_010650886.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_019075332.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
Length = 650
Score = 172 bits (436), Expect = 5e-47
Identities = 96/190 (50%), Positives = 122/190 (64%), Gaps = 16/190 (8%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQ+ RSEAP PS ++ G FQ KT VP + E QG+ + GV+ +G
Sbjct: 48 LYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEG 107
Query: 220 KYTNAGLQFPEQKERLTAEGG--------------AQKGIAPDTTNDTQTLSLGFRGSVP 357
KY+N F E+KE A G +QKG + T+DTQ +LGF+GS P
Sbjct: 108 KYSNP--HFHEKKEGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTP 165
Query: 358 VAQKIGSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQ--MNVNVKPPIVNDSQIRP 531
+ QK G++P D+ GK+AN+S P+ N G PR V QM SNQ MNVNV P+VN++QIRP
Sbjct: 166 IPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRP 225
Query: 532 AVENGATMLF 561
AV+NGATMLF
Sbjct: 226 AVDNGATMLF 235
>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X1 [Vitis vinifera]
Length = 656
Score = 172 bits (436), Expect = 5e-47
Identities = 96/190 (50%), Positives = 122/190 (64%), Gaps = 16/190 (8%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQ+ RSEAP PS ++ G FQ KT VP + E QG+ + GV+ +G
Sbjct: 54 LYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEG 113
Query: 220 KYTNAGLQFPEQKERLTAEGG--------------AQKGIAPDTTNDTQTLSLGFRGSVP 357
KY+N F E+KE A G +QKG + T+DTQ +LGF+GS P
Sbjct: 114 KYSNP--HFHEKKEGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTP 171
Query: 358 VAQKIGSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQ--MNVNVKPPIVNDSQIRP 531
+ QK G++P D+ GK+AN+S P+ N G PR V QM SNQ MNVNV P+VN++QIRP
Sbjct: 172 IPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRP 231
Query: 532 AVENGATMLF 561
AV+NGATMLF
Sbjct: 232 AVDNGATMLF 241
>ref|XP_008389756.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Malus domestica]
ref|XP_017192498.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Malus domestica]
Length = 658
Score = 172 bits (436), Expect = 5e-47
Identities = 88/189 (46%), Positives = 119/189 (62%), Gaps = 15/189 (7%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GF+Q+ RSEAP P GV NGG Q QKT+VPEPRA V Q + + GV+ G
Sbjct: 48 LYNDVNVGEGFMQMHRSEAPVPPGGVGNGGLQAQKTNVPEPRARAGVSQDLKIPGVSVQG 107
Query: 220 KYTNAGLQFPEQKERLTAE-------------GGAQKGIAPDTTNDTQTLSLGFRGSVPV 360
KY+ AG QFPEQ + A+ G+QKG + T+DTQ +GF+GS +
Sbjct: 108 KYSGAGAQFPEQNQPPVAKEPELGSTGYVGGASGSQKGRVMEMTHDTQVRQMGFQGSTTI 167
Query: 361 AQKIGSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQMN--VNVKPPIVNDSQIRPA 534
+G D D++GK ++ +P NP P G +Q+P+NQM+ +N P+VN++QIRP
Sbjct: 168 PPNVGIDSSDITGKGNSEYIPSLNPGTAGPPGAAQIPTNQMSIKINANRPMVNENQIRPP 227
Query: 535 VENGATMLF 561
+ENG+ MLF
Sbjct: 228 IENGSAMLF 236
>gb|KVH88949.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 636
Score = 171 bits (432), Expect = 2e-46
Identities = 93/179 (51%), Positives = 118/179 (65%), Gaps = 5/179 (2%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQ+QRSEA PS V NGGF QK +V E R E + Q +++ GVA +G
Sbjct: 45 LYNDVNVGEGFLQMQRSEAL-PSANVGNGGFHDQKVNVQEARPEAMPSQDINIPGVAAEG 103
Query: 220 KYTNAGLQFPEQKERLTAEGGAQKGIAPDTTNDTQTLSLGFRGSVPVAQKIGSDPVDMSG 399
Y + GL+ P+ KE +T + QK + P TND Q +S+GFRGS+ V QK DP+ MSG
Sbjct: 104 VYPSTGLRLPDNKEGMTVDL-LQKRMVPQVTNDVQAVSMGFRGSITVPQKPSVDPISMSG 162
Query: 400 KVANDSLPLQNPSAGVP-RGVSQMPSNQM----NVNVKPPIVNDSQIRPAVENGATMLF 561
+ N+ P+ N +AG GV QMP NQM NVN+ P+VN++QIRP ENGAT LF
Sbjct: 163 AITNEPAPMLNSNAGHSIGGVPQMPGNQMGANANVNMTRPVVNENQIRPPAENGATTLF 221
>ref|XP_015894525.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Ziziphus jujuba]
Length = 659
Score = 170 bits (431), Expect = 3e-46
Identities = 91/189 (48%), Positives = 115/189 (60%), Gaps = 15/189 (7%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQL RSEAP P GV NGG Q QK PEPR E Q +++ GV+ G
Sbjct: 48 LYNDVNVGEGFLQLHRSEAPQPPTGVGNGGHQAQKIDGPEPREEVGGSQELNIPGVSVQG 107
Query: 220 KYTNAGLQFPEQKERLTAEGGA-------------QKGIAPDTTNDTQTLSLGFRGSVPV 360
KY G QFPEQKE + G+ QKG + +DTQ +GF+GS +
Sbjct: 108 KYAGIGAQFPEQKEGPVVDKGSEARSMGYPDGASTQKGRVMEVNHDTQVRHMGFQGSTSI 167
Query: 361 AQKIGSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQM--NVNVKPPIVNDSQIRPA 534
IG D +++GK ++ +P N + PRG QMP+NQM NVN+ P+VN++QIRP
Sbjct: 168 TPSIGVDSSNITGKTVSEPVPTLNSGSAGPRGGPQMPANQMNANVNIHRPMVNENQIRPP 227
Query: 535 VENGATMLF 561
+ENGATMLF
Sbjct: 228 IENGATMLF 236
>ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Nicotiana tomentosiformis]
Length = 648
Score = 169 bits (428), Expect = 7e-46
Identities = 92/187 (49%), Positives = 121/187 (64%), Gaps = 13/187 (6%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQLQRSEAP P V NG F+ QK S P+ +A+ + + GVAT+G
Sbjct: 48 LYNDVNVGEGFLQLQRSEAPVPPVDAGNGSFRDQKASFPDAKADGIGSDEAKIPGVATEG 107
Query: 220 KYTNAGLQFPEQKERLTAEGG-------AQKG--IAPDTTNDTQTLSLGFRGSVPVAQKI 372
KY ++FPEQK AE G AQKG +A T D+Q + G++GS+P QKI
Sbjct: 108 KYAGTEVRFPEQKSGPVAERGTERPADAAQKGRPLAMMLTGDSQMGNSGYQGSIPTTQKI 167
Query: 373 GSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQM----NVNVKPPIVNDSQIRPAVE 540
G+DP++M K AN++ PL N G R V QMP+NQ+ NVN+ PI++++ IRP++E
Sbjct: 168 GADPINMPEKNANEATPLVNSGVGGSRVVPQMPTNQLSSSGNVNMNSPIISETPIRPSLE 227
Query: 541 NGATMLF 561
NG TMLF
Sbjct: 228 NGNTMLF 234
>ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Pyrus x bretschneideri]
Length = 656
Score = 169 bits (427), Expect = 1e-45
Identities = 86/189 (45%), Positives = 120/189 (63%), Gaps = 15/189 (7%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GF+Q+ RSEAP P+ GV NGG Q QKT VPEPR ++ V Q + + GV+ G
Sbjct: 48 LYNDVNVGEGFMQMHRSEAPLPTGGVGNGGLQAQKTDVPEPRVQSGVSQDLKIPGVSVQG 107
Query: 220 KYTNAGLQFPEQKERLTAE-------------GGAQKGIAPDTTNDTQTLSLGFRGSVPV 360
KY+ AG QFPEQ + A+ G+QKG D T+DTQ + F+GS +
Sbjct: 108 KYSGAGAQFPEQNQPPVAKEPELGSTGYASGASGSQKGRVMDMTHDTQVRHMAFQGSTTM 167
Query: 361 AQKIGSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQMN--VNVKPPIVNDSQIRPA 534
+G D D++GK ++ +P NP++ P G +Q+P+NQM+ +N P+VN++QIRP
Sbjct: 168 PPNVGVDSSDITGKGNSEFVPSLNPASAGPPGATQIPTNQMSIKINANRPMVNENQIRPP 227
Query: 535 VENGATMLF 561
+ENG+ LF
Sbjct: 228 IENGSATLF 236
>ref|XP_019176127.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Ipomoea nil]
ref|XP_019176128.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Ipomoea nil]
ref|XP_019176129.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Ipomoea nil]
Length = 638
Score = 166 bits (420), Expect = 8e-45
Identities = 92/185 (49%), Positives = 121/185 (65%), Gaps = 11/185 (5%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQLQRSEAP P V NGG Q + S+ EPRA + Q M+ GVA+
Sbjct: 48 LYNDVNVGEGFLQLQRSEAPKPPDTVGNGGSQAPENSMSEPRAGAITSQEMNP-GVAS-- 104
Query: 220 KYTNAGLQFPEQKERLTAEGGA-------QKGIAPDTTNDTQTLSLGFRGSVPVAQKIGS 378
+GL+FPEQK LT E G +K P T D Q ++GF+GSVP++ + GS
Sbjct: 105 ----SGLRFPEQKSGLTTERGPNQAADAPEKARPPSMTRDPQVGNMGFQGSVPMSHRTGS 160
Query: 379 DPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQM----NVNVKPPIVNDSQIRPAVENG 546
DP D+SG ++S+PLQN +AG RG MP++QM N+N+ P++N++Q+RPA+ENG
Sbjct: 161 DPADISGNAVSESMPLQNSAAGGSRGAPLMPAHQMNSNANINMNSPMMNENQMRPAIENG 220
Query: 547 ATMLF 561
TMLF
Sbjct: 221 NTMLF 225
>ref|XP_008221952.1| PREDICTED: RNA-binding motif protein, X chromosome [Prunus mume]
Length = 647
Score = 164 bits (416), Expect = 3e-44
Identities = 88/190 (46%), Positives = 118/190 (62%), Gaps = 16/190 (8%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQ+ RSEAP P GV NGG Q QKT V E R + V Q + GV+ G
Sbjct: 48 LYNDVNVGEGFLQMHRSEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQG 107
Query: 220 KYTNAGLQFPEQKER--------------LTAEGGAQKGIAPDTTNDTQTLSLGFRGSVP 357
KY++A QFPEQ+++ + G+QKG A + ++DTQ +GF+GS
Sbjct: 108 KYSSAVAQFPEQQDQPPVAKEPELGSTGYVGGASGSQKGRAMEMSHDTQVRHMGFQGSTT 167
Query: 358 VAQKIGSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQMN--VNVKPPIVNDSQIRP 531
+ IG D D++GK A +S+P N P GV+QMP+NQ++ VN P+ N++Q+RP
Sbjct: 168 MPPNIGGDSSDITGKTALESVPSMNSGTAGPTGVTQMPTNQISIKVNANRPMFNENQVRP 227
Query: 532 AVENGATMLF 561
VENG+TMLF
Sbjct: 228 TVENGSTMLF 237
>ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Nicotiana sylvestris]
Length = 648
Score = 164 bits (416), Expect = 3e-44
Identities = 90/187 (48%), Positives = 119/187 (63%), Gaps = 13/187 (6%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQLQRSEAP P V N FQ QK S P+ +A+ + + GVAT+G
Sbjct: 48 LYNDVNVGEGFLQLQRSEAPVPPVDAGNVSFQDQKASFPDAKADGIGSDEAKIPGVATEG 107
Query: 220 KYTNAGLQFPEQKERLTAEGG-------AQKG--IAPDTTNDTQTLSLGFRGSVPVAQKI 372
KY ++FPEQK E G AQKG +A T D+Q + G++GS+ QKI
Sbjct: 108 KYAGTEVRFPEQKSGPVVERGTERPADAAQKGRPLAMMLTRDSQVGNSGYQGSIQTTQKI 167
Query: 373 GSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQM----NVNVKPPIVNDSQIRPAVE 540
G+DP++M K AN++ PL N G R V+QMP+NQ+ NVN+ PI++++ IRP++E
Sbjct: 168 GADPINMPEKNANEATPLVNSGVGGSRVVTQMPTNQLSSSGNVNINSPIISETPIRPSLE 227
Query: 541 NGATMLF 561
NG TMLF
Sbjct: 228 NGNTMLF 234
>ref|XP_019231531.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Nicotiana attenuata]
gb|OIT28678.1| hypothetical protein A4A49_35854 [Nicotiana attenuata]
Length = 648
Score = 164 bits (415), Expect = 5e-44
Identities = 92/187 (49%), Positives = 120/187 (64%), Gaps = 13/187 (6%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQLQRSEAP P V N FQ QK S P+ +A+ + + VAT+G
Sbjct: 48 LYNDVNVGEGFLQLQRSEAPVPPVDAGNVSFQDQKASFPDAKADGIGSDEAKIPCVATEG 107
Query: 220 KYTNAGLQFPEQK-----ERLTAE--GGAQKG--IAPDTTNDTQTLSLGFRGSVPVAQKI 372
KY ++FPEQK ER T G AQKG +A T D+Q + G++GS+P QKI
Sbjct: 108 KYAGTEVRFPEQKSGPVVERATERPAGAAQKGKPLAMTLTRDSQMGNSGYQGSIPTTQKI 167
Query: 373 GSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQM----NVNVKPPIVNDSQIRPAVE 540
G+DP++M K AN++ PL N G R V QMP+NQ+ NVN+ PI++++ IRP++E
Sbjct: 168 GADPINMPEKNANEATPLVNSGVGGSRIVPQMPANQLGSSGNVNMNSPIISETPIRPSLE 227
Query: 541 NGATMLF 561
NG TMLF
Sbjct: 228 NGNTMLF 234
>ref|XP_021818512.1| cleavage and polyadenylation specificity factor subunit 6 isoform
X1 [Prunus avium]
ref|XP_021818513.1| cleavage and polyadenylation specificity factor subunit 6 isoform
X2 [Prunus avium]
Length = 660
Score = 162 bits (410), Expect = 3e-43
Identities = 88/190 (46%), Positives = 117/190 (61%), Gaps = 16/190 (8%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG GFLQ+ RSEAP P GV NGG Q QKT V E R + V Q + G + G
Sbjct: 48 LYNDVNVGEGFLQMHRSEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKISGGSVQG 107
Query: 220 KYTNAGLQFPEQKER--------------LTAEGGAQKGIAPDTTNDTQTLSLGFRGSVP 357
KY++A QFPEQ+++ + G+QKG A + ++DTQ +GF+GS
Sbjct: 108 KYSSAVAQFPEQQDQPPVAKEPELGSTGYVGGASGSQKGRAMEMSHDTQVRHMGFQGSTT 167
Query: 358 VAQKIGSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQMN--VNVKPPIVNDSQIRP 531
+ IG D D++GK A +S+P N P GV+QMP+NQ++ VN P+ N++QIRP
Sbjct: 168 MPPNIGGDSSDITGKTALESVPSMNSGTAGPTGVTQMPTNQISIKVNANRPMFNENQIRP 227
Query: 532 AVENGATMLF 561
VENG+TMLF
Sbjct: 228 PVENGSTMLF 237
>dbj|GAY43963.1| hypothetical protein CUMW_078630 [Citrus unshiu]
Length = 658
Score = 162 bits (409), Expect = 4e-43
Identities = 89/190 (46%), Positives = 118/190 (62%), Gaps = 16/190 (8%)
Frame = +1
Query: 40 LYNDVNVGGGFLQLQRSEAPGPSVGVSNGGFQTQKTSVPEPRAENVVPQGMSVHGVATDG 219
LYNDVNVG G LQ Q+ EAP PS GV NG Q +KT VPE + + V QG +V GV+ +G
Sbjct: 48 LYNDVNVGDGLLQFQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEG 107
Query: 220 KYTNAGLQFPEQKERLTA------------EGG--AQKGIAPDTTNDTQTLSLGFRGSVP 357
KYTNAG FP Q + A +G +QKG +TT+D ++GF+GS
Sbjct: 108 KYTNAGTHFPAQNDVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTS 167
Query: 358 VAQKIGSDPVDMSGKVANDSLPLQNPSAGVPRGVSQMPSNQM--NVNVKPPIVNDSQIRP 531
+ G DP +M G+VAN+ P+ NP A P+G + +P+NQM N+NV +VN++QIRP
Sbjct: 168 GPSRTGVDPSNMPGRVANEPAPVLNPGAAGPQG-ALIPANQMGVNINVNRAMVNENQIRP 226
Query: 532 AVENGATMLF 561
+ENG TMLF
Sbjct: 227 PLENGGTMLF 236