BLASTX nr result
ID: Acanthopanax24_contig00021788
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00021788
(745 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009433353.1| ribosomal protein L23 (chloroplast) [Zostera... 115 2e-28
ref|YP_009433372.1| ribosomal protein L23 (chloroplast) [Zostera... 89 2e-18
gb|ATW72873.1| ccmC (mitochondrion) [Solanum commersonii] >gi|13... 79 8e-14
gb|AUS83345.1| CcmC (mitochondrion) [Solanum tuberosum] >gi|1333... 78 3e-13
gb|PHT41171.1| putative cytochrome c biosynthesis ccmC-like mito... 74 6e-13
gb|OMO71600.1| ORF40m [Corchorus olitorius] >gi|1137263978|gb|OM... 71 7e-13
gb|PHT75050.1| putative cytochrome c biosynthesis ccmC-like mito... 74 1e-12
gb|KYP74588.1| hypothetical protein KK1_007274 [Cajanus cajan] 69 7e-12
gb|KRG89738.1| hypothetical protein GLYMA_20G045300 [Glycine max] 69 7e-12
ref|XP_007132758.1| hypothetical protein PHAVU_011G122600g [Phas... 69 7e-12
dbj|BAU03448.1| hypothetical protein VIGAN_UM107800 [Vigna angul... 69 5e-11
gb|OMP13319.1| ORF40m [Corchorus olitorius] 63 6e-10
ref|YP_009305155.1| cytochrome c maturase subunit C (mitochondri... 67 2e-09
gb|AKJ25503.1| cytochrome c maturase subunit C (mitochondrion) [... 66 4e-09
gb|PHU00637.1| Photosystem I chlorophyll a apoprotein A1 [Capsic... 66 8e-09
ref|XP_007151623.1| hypothetical protein PHAVU_004G062700g [Phas... 57 3e-07
>ref|YP_009433353.1| ribosomal protein L23 (chloroplast) [Zostera marina]
gb|ATD85263.1| ribosomal protein L23 (chloroplast) [Zostera marina]
Length = 163
Score = 115 bits (288), Expect = 2e-28
Identities = 57/74 (77%), Positives = 62/74 (83%)
Frame = +3
Query: 522 IIGEFVGSIPTGCTPMGPSNKSIGIGSVSMESHHPYITNWCGIFIS*HNI*TVRTSILIE 701
+IG+FVGSIP GCTPMG NKSIGIGSV +ESHHPYITNW GIFI HNI T+RT ILI+
Sbjct: 1 MIGKFVGSIPAGCTPMGTFNKSIGIGSVYIESHHPYITNWYGIFI--HNIRTIRTRILID 58
Query: 702 TRTHRE*NRFMDGI 743
T THRE N FMDGI
Sbjct: 59 TGTHREENGFMDGI 72
>ref|YP_009433372.1| ribosomal protein L23 (chloroplast) [Zostera marina]
gb|ATD85282.1| ribosomal protein L23 (chloroplast) [Zostera marina]
Length = 148
Score = 88.6 bits (218), Expect = 2e-18
Identities = 45/59 (76%), Positives = 48/59 (81%)
Frame = +3
Query: 567 MGPSNKSIGIGSVSMESHHPYITNWCGIFIS*HNI*TVRTSILIETRTHRE*NRFMDGI 743
MG NKSIGIGSV +ESHHPYITNW GIFI HNI T+RT ILI+T THRE N FMDGI
Sbjct: 1 MGTFNKSIGIGSVYIESHHPYITNWYGIFI--HNIRTIRTRILIDTGTHREENGFMDGI 57
>gb|ATW72873.1| ccmC (mitochondrion) [Solanum commersonii]
gb|AUS83456.1| CcmC (mitochondrion) [Solanum tuberosum]
Length = 276
Score = 79.3 bits (194), Expect = 8e-14
Identities = 48/99 (48%), Positives = 57/99 (57%), Gaps = 9/99 (9%)
Frame = +2
Query: 311 PFPIPA*K-FLNQPTLKMEQSFTSSMIPTLRKRTKIK*NLTETILEGKVTQNLVH----- 472
P PIP F N P F++ ++ L R I + LE +T+ +
Sbjct: 190 PMPIPILSNFANSP-------FSTRILFVLETRLPIP-----SFLESPLTEEIEAREGIP 237
Query: 473 ---SLSLFASMAEWLKRPTHNWRIRRFNSYWMHANGTLQ 580
SL+ FASMAEWLKRPTHNWRIRRFNSYWMHANGTLQ
Sbjct: 238 KPISLADFASMAEWLKRPTHNWRIRRFNSYWMHANGTLQ 276
>gb|AUS83345.1| CcmC (mitochondrion) [Solanum tuberosum]
gb|AUS83407.1| CcmC (mitochondrion) [Solanum tuberosum]
Length = 276
Score = 77.8 bits (190), Expect = 3e-13
Identities = 47/99 (47%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Frame = +2
Query: 311 PFPIPA*K-FLNQPTLKMEQSFTSSMIPTLRKRTKIK*NLTETILEGKVTQNLVH----- 472
P PIP F N P F++ ++ L R I + LE +T+ +
Sbjct: 190 PMPIPILSNFANSP-------FSTRILFVLETRLPIP-----SFLESPLTEEIEAREGIP 237
Query: 473 ---SLSLFASMAEWLKRPTHNWRIRRFNSYWMHANGTLQ 580
SL+ FASMAEWLKRPTHNWRIRRFNSYWMH NGTLQ
Sbjct: 238 KPISLADFASMAEWLKRPTHNWRIRRFNSYWMHTNGTLQ 276
>gb|PHT41171.1| putative cytochrome c biosynthesis ccmC-like mitochondrial protein
[Capsicum baccatum]
Length = 153
Score = 74.3 bits (181), Expect = 6e-13
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +3
Query: 540 GSIPTGCTPMGPSNKSIGIGSVSMESHHPYITN 638
GSIPTGCTPMGPSNKSIGIGSVSMESHHPYITN
Sbjct: 121 GSIPTGCTPMGPSNKSIGIGSVSMESHHPYITN 153
>gb|OMO71600.1| ORF40m [Corchorus olitorius]
gb|OMP12505.1| ORF40m [Corchorus olitorius]
gb|OMP12905.1| ORF40m [Corchorus olitorius]
gb|OMP13125.1| ORF40m [Corchorus olitorius]
gb|OMP13856.1| ORF40m [Corchorus olitorius]
gb|OMP14015.1| ORF40m [Corchorus olitorius]
gb|OMP14038.1| ORF40m [Corchorus olitorius]
Length = 29
Score = 70.9 bits (172), Expect = 7e-13
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 494 MAEWLKRPTHNWRIRRFNSYWMHANGTLQ 580
MAEWLKRPTHNWRIRRFNSYWMHANGTLQ
Sbjct: 1 MAEWLKRPTHNWRIRRFNSYWMHANGTLQ 29
>gb|PHT75050.1| putative cytochrome c biosynthesis ccmC-like mitochondrial protein
[Capsicum annuum]
Length = 190
Score = 74.3 bits (181), Expect = 1e-12
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +3
Query: 540 GSIPTGCTPMGPSNKSIGIGSVSMESHHPYITN 638
GSIPTGCTPMGPSNKSIGIGSVSMESHHPYITN
Sbjct: 158 GSIPTGCTPMGPSNKSIGIGSVSMESHHPYITN 190
>gb|KYP74588.1| hypothetical protein KK1_007274 [Cajanus cajan]
Length = 61
Score = 68.9 bits (167), Expect = 7e-12
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 494 MAEWLKRPTHNWRIRRFNSYWMHANGTL 577
MAEWLKRPTHNWRIRRFNSYWMHANGTL
Sbjct: 1 MAEWLKRPTHNWRIRRFNSYWMHANGTL 28
>gb|KRG89738.1| hypothetical protein GLYMA_20G045300 [Glycine max]
Length = 61
Score = 68.9 bits (167), Expect = 7e-12
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 494 MAEWLKRPTHNWRIRRFNSYWMHANGTL 577
MAEWLKRPTHNWRIRRFNSYWMHANGTL
Sbjct: 1 MAEWLKRPTHNWRIRRFNSYWMHANGTL 28
>ref|XP_007132758.1| hypothetical protein PHAVU_011G122600g [Phaseolus vulgaris]
ref|XP_007132760.1| hypothetical protein PHAVU_011G122700g [Phaseolus vulgaris]
gb|ESW04752.1| hypothetical protein PHAVU_011G122600g [Phaseolus vulgaris]
gb|ESW04754.1| hypothetical protein PHAVU_011G122700g [Phaseolus vulgaris]
Length = 61
Score = 68.9 bits (167), Expect = 7e-12
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 494 MAEWLKRPTHNWRIRRFNSYWMHANGTL 577
MAEWLKRPTHNWRIRRFNSYWMHANGTL
Sbjct: 1 MAEWLKRPTHNWRIRRFNSYWMHANGTL 28
>dbj|BAU03448.1| hypothetical protein VIGAN_UM107800 [Vigna angularis var.
angularis]
Length = 143
Score = 68.9 bits (167), Expect = 5e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 494 MAEWLKRPTHNWRIRRFNSYWMHANGTL 577
MAEWLKRPTHNWRIRRFNSYWMHANGTL
Sbjct: 1 MAEWLKRPTHNWRIRRFNSYWMHANGTL 28
>gb|OMP13319.1| ORF40m [Corchorus olitorius]
Length = 39
Score = 63.2 bits (152), Expect = 6e-10
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 494 MAEWLKRPTHNWRIRRFNSYWMHAN 568
MAEWLKRPTHNWRIRRFNSYWMHAN
Sbjct: 1 MAEWLKRPTHNWRIRRFNSYWMHAN 25
>ref|YP_009305155.1| cytochrome c maturase subunit C (mitochondrion) [Hesperelaea
palmeri]
gb|AOO96381.1| cytochrome c maturase subunit C (mitochondrion) [Hesperelaea
palmeri]
Length = 304
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/52 (67%), Positives = 40/52 (76%)
Frame = +2
Query: 425 LTETILEGKVTQNLVHSLSLFASMAEWLKRPTHNWRIRRFNSYWMHANGTLQ 580
LTE I K QNLVHSLSLFASMAEW+KRPT +IRRF+S WMH G++Q
Sbjct: 226 LTEEIEAEKEYQNLVHSLSLFASMAEWVKRPT--GKIRRFDSCWMHLEGSVQ 275
>gb|AKJ25503.1| cytochrome c maturase subunit C (mitochondrion) [Hypseocharis
bilobata]
Length = 269
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/47 (74%), Positives = 37/47 (78%)
Frame = +2
Query: 422 NLTETILEGKVTQNLVHSLSLFASMAEWLKRPTHNWRIRRFNSYWMH 562
+LTE I E + QNLVHSLSLFASMAEWLK P N RI RFNSYWMH
Sbjct: 225 SLTEEI-EAREVQNLVHSLSLFASMAEWLKHP--NGRISRFNSYWMH 268
>gb|PHU00637.1| Photosystem I chlorophyll a apoprotein A1 [Capsicum chinense]
Length = 480
Score = 66.2 bits (160), Expect = 8e-09
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = -1
Query: 631 MYG**DSIDTEPIPIDLLEGPIGVHPVGIEPTNSPIMS 518
MYG DSIDT+PIPIDLL+GP G+HP+G EPTNSPIMS
Sbjct: 1 MYGWCDSIDTKPIPIDLLKGPNGMHPIGTEPTNSPIMS 38
>ref|XP_007151623.1| hypothetical protein PHAVU_004G062700g [Phaseolus vulgaris]
gb|ESW23617.1| hypothetical protein PHAVU_004G062700g [Phaseolus vulgaris]
Length = 76
Score = 57.0 bits (136), Expect = 3e-07
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +2
Query: 494 MAEWLKRPTHNWRIRRFNSYWMHANGTL 577
M +WLKR TH+WR+ RFNSYWMHANGTL
Sbjct: 1 MDKWLKRQTHHWRMHRFNSYWMHANGTL 28