BLASTX nr result
ID: Acanthopanax24_contig00021554
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00021554
(600 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017222986.1| PREDICTED: splicing factor U2af large subuni... 126 3e-30
gb|KZM84483.1| hypothetical protein DCAR_028095 [Daucus carota s... 103 4e-22
gb|KVI00974.1| Nucleotide-binding, alpha-beta plait [Cynara card... 87 1e-16
ref|XP_023756974.1| splicing factor U2af large subunit B-like is... 82 9e-15
ref|XP_023756973.1| splicing factor U2af large subunit B-like is... 82 9e-15
gb|KVH96974.1| hypothetical protein Ccrd_000932 [Cynara carduncu... 76 2e-12
ref|XP_021993692.1| splicing factor U2af large subunit B-like is... 74 7e-12
ref|XP_021993689.1| splicing factor U2af large subunit B-like is... 74 7e-12
ref|XP_021993691.1| splicing factor U2af large subunit B-like is... 71 9e-11
ref|XP_021993690.1| splicing factor U2af large subunit B-like is... 71 9e-11
ref|XP_021993688.1| splicing factor U2af large subunit B-like is... 71 9e-11
gb|OVA00566.1| RNA recognition motif domain [Macleaya cordata] 64 3e-08
gb|OVA13223.1| RNA recognition motif domain [Macleaya cordata] 63 5e-08
ref|XP_010242964.1| PREDICTED: splicing factor U2af large subuni... 57 4e-06
ref|XP_010242963.1| PREDICTED: splicing factor U2af large subuni... 57 4e-06
>ref|XP_017222986.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Daucus carota subsp. sativus]
Length = 540
Score = 126 bits (316), Expect = 3e-30
Identities = 72/158 (45%), Positives = 80/158 (50%), Gaps = 1/158 (0%)
Frame = +3
Query: 129 MSRHDRRRYNGDGEGDQGGSSPYDVFEDRTSHH-KQKFHESDRERLKTXXXXXXXXXXXX 305
MSRHD R YN DG+ DQGGSSPYDVFEDR+SHH KQK++E +RERL+T
Sbjct: 1 MSRHDNR-YNADGDADQGGSSPYDVFEDRSSHHQKQKYNEPERERLRTRERDQDRDSGRD 59
Query: 306 XXXXXYQXXXXXXXXXXXXXXXXXXXXNHDYGRRQDYNXXXXXXXXXXXXXPSVEXXXXX 485
Y NHDY RR DY+ PSVE
Sbjct: 60 RRHSDYHDRSGRDGRGRGRNEDSGRSRNHDYSRRHDYDRDKERHHRHRSRSPSVERSRDK 119
Query: 486 XXXXXXXXXTSGFDMAPPVATTLPGAAGQPLDVPQAMP 599
TSGFDMAP VATTLPGA GQ + PQAMP
Sbjct: 120 SRSRSKSKRTSGFDMAPTVATTLPGAPGQQPEAPQAMP 157
>gb|KZM84483.1| hypothetical protein DCAR_028095 [Daucus carota subsp. sativus]
Length = 506
Score = 103 bits (256), Expect = 4e-22
Identities = 64/158 (40%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Frame = +3
Query: 129 MSRHDRRRYNGDGEGDQGGSSPYDVFEDRTSHH-KQKFHESDRERLKTXXXXXXXXXXXX 305
MSRHD R YN DG+ DQGGSSPYDVFEDR+SHH KQK++E +RERL+T
Sbjct: 1 MSRHDNR-YNADGDADQGGSSPYDVFEDRSSHHQKQKYNEPERERLRTRERDQDRDSGRD 59
Query: 306 XXXXXYQXXXXXXXXXXXXXXXXXXXXNHDYGRRQDYNXXXXXXXXXXXXXPSVEXXXXX 485
Y NHDY ++
Sbjct: 60 RRHSDYHDRSGRDGRGRGRNEDSGRSRNHDYSSKR------------------------- 94
Query: 486 XXXXXXXXXTSGFDMAPPVATTLPGAAGQPLDVPQAMP 599
TSGFDMAP VATTLPGA GQ + PQAMP
Sbjct: 95 ---------TSGFDMAPTVATTLPGAPGQQPEAPQAMP 123
>gb|KVI00974.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 492
Score = 87.4 bits (215), Expect = 1e-16
Identities = 56/156 (35%), Positives = 63/156 (40%)
Frame = +3
Query: 132 SRHDRRRYNGDGEGDQGGSSPYDVFEDRTSHHKQKFHESDRERLKTXXXXXXXXXXXXXX 311
SRHD R +GDG G GSSPYDVFEDR S ++ D +R KT
Sbjct: 3 SRHDNRHPDGDGGG---GSSPYDVFEDRDSQIQKHKGREDNDRSKTRERDRDRGKDRDRR 59
Query: 312 XXXYQXXXXXXXXXXXXXXXXXXXXNHDYGRRQDYNXXXXXXXXXXXXXPSVEXXXXXXX 491
Y N DY RR DY+ S +
Sbjct: 60 HRDYPERSGRDERGRERNDDDGRSRNRDYSRRHDYDRDRERHHRHRSRSASPDRSRESSR 119
Query: 492 XXXXXXXTSGFDMAPPVATTLPGAAGQPLDVPQAMP 599
TSGFDMAPP A TLPGA GQ D PQ+MP
Sbjct: 120 SRSKSKRTSGFDMAPPTAATLPGAVGQLPDAPQSMP 155
>ref|XP_023756974.1| splicing factor U2af large subunit B-like isoform X2 [Lactuca
sativa]
gb|PLY90502.1| hypothetical protein LSAT_1X125801 [Lactuca sativa]
Length = 538
Score = 82.4 bits (202), Expect = 9e-15
Identities = 56/159 (35%), Positives = 63/159 (39%), Gaps = 3/159 (1%)
Frame = +3
Query: 132 SRHDRRRYNGDGEGDQGGSSPYDVFEDRTSHHKQKFHESDRERLKTXXXXXXXXXXXXXX 311
SRH+ R +GDG G GSSPYDVFEDR S ++ D ER KT
Sbjct: 3 SRHENRHADGDGGG---GSSPYDVFEDRDSQIQKHKGREDSERSKTRERERDRDRDRGSR 59
Query: 312 XXX---YQXXXXXXXXXXXXXXXXXXXXNHDYGRRQDYNXXXXXXXXXXXXXPSVEXXXX 482
Y N DY RR DY+ S +
Sbjct: 60 DRRHRDYPERSSRDERGRDRNEDDGRSRNRDYSRRNDYDRERERHHRHRSRSASPDRSRE 119
Query: 483 XXXXXXXXXXTSGFDMAPPVATTLPGAAGQPLDVPQAMP 599
TSGFDMAPP A T+PGA GQ D PQAMP
Sbjct: 120 SSRSRSKSKRTSGFDMAPPSAATMPGAVGQVTDAPQAMP 158
>ref|XP_023756973.1| splicing factor U2af large subunit B-like isoform X1 [Lactuca
sativa]
Length = 539
Score = 82.4 bits (202), Expect = 9e-15
Identities = 56/159 (35%), Positives = 63/159 (39%), Gaps = 3/159 (1%)
Frame = +3
Query: 132 SRHDRRRYNGDGEGDQGGSSPYDVFEDRTSHHKQKFHESDRERLKTXXXXXXXXXXXXXX 311
SRH+ R +GDG G GSSPYDVFEDR S ++ D ER KT
Sbjct: 3 SRHENRHADGDGGG---GSSPYDVFEDRDSQIQKHKGREDSERSKTRERERDRDRDRGSR 59
Query: 312 XXX---YQXXXXXXXXXXXXXXXXXXXXNHDYGRRQDYNXXXXXXXXXXXXXPSVEXXXX 482
Y N DY RR DY+ S +
Sbjct: 60 DRRHRDYPERSSRDERGRDRNEDDGRSRNRDYSRRNDYDRERERHHRHRSRSASPDRSRE 119
Query: 483 XXXXXXXXXXTSGFDMAPPVATTLPGAAGQPLDVPQAMP 599
TSGFDMAPP A T+PGA GQ D PQAMP
Sbjct: 120 SSRSRSKSKRTSGFDMAPPSAATMPGAVGQVTDAPQAMP 158
>gb|KVH96974.1| hypothetical protein Ccrd_000932 [Cynara cardunculus var. scolymus]
Length = 511
Score = 75.9 bits (185), Expect = 2e-12
Identities = 55/156 (35%), Positives = 61/156 (39%)
Frame = +3
Query: 132 SRHDRRRYNGDGEGDQGGSSPYDVFEDRTSHHKQKFHESDRERLKTXXXXXXXXXXXXXX 311
SRHD R +G G GS PYD FEDR H K D ERL+T
Sbjct: 3 SRHDSRHTDGSG-----GSLPYDEFEDRDFHLKHN-SRGDNERLRTTDPDRGKDRDRRHR 56
Query: 312 XXXYQXXXXXXXXXXXXXXXXXXXXNHDYGRRQDYNXXXXXXXXXXXXXPSVEXXXXXXX 491
+ N DY RR DY+ S +
Sbjct: 57 DYSERSGRDERGRGRNDDNGRG---NRDYSRRHDYDRDRERHHRHRSRSASPDRSRDTSR 113
Query: 492 XXXXXXXTSGFDMAPPVATTLPGAAGQPLDVPQAMP 599
TSGFDMAPP A TLPGAAGQ DVPQ+MP
Sbjct: 114 SRSKSKRTSGFDMAPPTAATLPGAAGQFSDVPQSMP 149
>ref|XP_021993692.1| splicing factor U2af large subunit B-like isoform X5 [Helianthus
annuus]
gb|OTG08169.1| putative U2 snRNP auxilliary factor, large subunit, splicing factor
[Helianthus annuus]
Length = 544
Score = 73.9 bits (180), Expect = 7e-12
Identities = 56/162 (34%), Positives = 61/162 (37%), Gaps = 14/162 (8%)
Frame = +3
Query: 156 NGDGEGDQGGSSPYDVFEDRTSH-HKQKFHESDRERLKTXXXXXXXXXXXXXXXXXYQXX 332
+ DG+G GGSSPYDVFEDR S HK K E D ER KT +
Sbjct: 5 HADGDGG-GGSSPYDVFEDRDSQIHKHKVRE-DSERSKTRDRDRDRDRERDRDKDRERDR 62
Query: 333 XXXXXXXXXXXXXXXXXX-------------NHDYGRRQDYNXXXXXXXXXXXXXPSVEX 473
N DY RR DY+ PS +
Sbjct: 63 DRGKDRDRDRRHRDYPERSGRDRNDDDGRSRNRDYNRRHDYDRDRERHHRHRSRSPSPDR 122
Query: 474 XXXXXXXXXXXXXTSGFDMAPPVATTLPGAAGQPLDVPQAMP 599
TSGFDMAPP A TLPGA GQ D PQ MP
Sbjct: 123 SRESSRSRSKSKRTSGFDMAPPTAATLPGAVGQVADAPQPMP 164
>ref|XP_021993689.1| splicing factor U2af large subunit B-like isoform X2 [Helianthus
annuus]
Length = 545
Score = 73.9 bits (180), Expect = 7e-12
Identities = 56/162 (34%), Positives = 61/162 (37%), Gaps = 14/162 (8%)
Frame = +3
Query: 156 NGDGEGDQGGSSPYDVFEDRTSH-HKQKFHESDRERLKTXXXXXXXXXXXXXXXXXYQXX 332
+ DG+G GGSSPYDVFEDR S HK K E D ER KT +
Sbjct: 5 HADGDGG-GGSSPYDVFEDRDSQIHKHKVRE-DSERSKTRDRDRDRDRERDRDKDRERDR 62
Query: 333 XXXXXXXXXXXXXXXXXX-------------NHDYGRRQDYNXXXXXXXXXXXXXPSVEX 473
N DY RR DY+ PS +
Sbjct: 63 DRGKDRDRDRRHRDYPERSGRDRNDDDGRSRNRDYNRRHDYDRDRERHHRHRSRSPSPDR 122
Query: 474 XXXXXXXXXXXXXTSGFDMAPPVATTLPGAAGQPLDVPQAMP 599
TSGFDMAPP A TLPGA GQ D PQ MP
Sbjct: 123 SRESSRSRSKSKRTSGFDMAPPTAATLPGAVGQVADAPQPMP 164
>ref|XP_021993691.1| splicing factor U2af large subunit B-like isoform X4 [Helianthus
annuus]
Length = 545
Score = 70.9 bits (172), Expect = 9e-11
Identities = 57/163 (34%), Positives = 62/163 (38%), Gaps = 15/163 (9%)
Frame = +3
Query: 156 NGDGEGDQGGSSPYDVFEDRTSH-HKQKFHESDRERLKTXXXXXXXXXXXXXXXXXYQXX 332
+ DG+G GGSSPYDVFEDR S HK K E D ER KT +
Sbjct: 5 HADGDGG-GGSSPYDVFEDRDSQIHKHKVRE-DSERSKTRDRDRDRDRERDRDKDRERDR 62
Query: 333 XXXXXXXXXXXXXXXXXX-------------NHDYGRRQDYNXXXXXXXXXXXXXPSVEX 473
N DY RR DY+ PS +
Sbjct: 63 DRGKDRDRDRRHRDYPERSGRDRNDDDGRSRNRDYNRRHDYDRDRERHHRHRSRSPSPDR 122
Query: 474 XXXXXXXXXXXXXTSGFDMAPPVATTLPGA-AGQPLDVPQAMP 599
TSGFDMAPP A TLPGA AGQ D PQ MP
Sbjct: 123 SRESSRSRSKSKRTSGFDMAPPTAATLPGAVAGQVADAPQPMP 165
>ref|XP_021993690.1| splicing factor U2af large subunit B-like isoform X3 [Helianthus
annuus]
Length = 545
Score = 70.9 bits (172), Expect = 9e-11
Identities = 57/163 (34%), Positives = 62/163 (38%), Gaps = 15/163 (9%)
Frame = +3
Query: 156 NGDGEGDQGGSSPYDVFEDRTSH-HKQKFHESDRERLKTXXXXXXXXXXXXXXXXXYQXX 332
+ DG+G GGSSPYDVFEDR S HK K E D ER KT +
Sbjct: 5 HADGDGG-GGSSPYDVFEDRDSQIHKHKVRE-DSERSKTRDRDRDRDRERDRDKDRERDR 62
Query: 333 XXXXXXXXXXXXXXXXXX-------------NHDYGRRQDYNXXXXXXXXXXXXXPSVEX 473
N DY RR DY+ PS +
Sbjct: 63 DRGKDRDRDRRHRDYPERSGRDRNDDDGRSRNRDYNRRHDYDRDRERHHRHRSRSPSPDR 122
Query: 474 XXXXXXXXXXXXXTSGFDMAPPVATTLPGA-AGQPLDVPQAMP 599
TSGFDMAPP A TLPGA AGQ D PQ MP
Sbjct: 123 SRESSRSRSKSKRTSGFDMAPPTAATLPGAVAGQVADAPQPMP 165
>ref|XP_021993688.1| splicing factor U2af large subunit B-like isoform X1 [Helianthus
annuus]
Length = 546
Score = 70.9 bits (172), Expect = 9e-11
Identities = 57/163 (34%), Positives = 62/163 (38%), Gaps = 15/163 (9%)
Frame = +3
Query: 156 NGDGEGDQGGSSPYDVFEDRTSH-HKQKFHESDRERLKTXXXXXXXXXXXXXXXXXYQXX 332
+ DG+G GGSSPYDVFEDR S HK K E D ER KT +
Sbjct: 5 HADGDGG-GGSSPYDVFEDRDSQIHKHKVRE-DSERSKTRDRDRDRDRERDRDKDRERDR 62
Query: 333 XXXXXXXXXXXXXXXXXX-------------NHDYGRRQDYNXXXXXXXXXXXXXPSVEX 473
N DY RR DY+ PS +
Sbjct: 63 DRGKDRDRDRRHRDYPERSGRDRNDDDGRSRNRDYNRRHDYDRDRERHHRHRSRSPSPDR 122
Query: 474 XXXXXXXXXXXXXTSGFDMAPPVATTLPGA-AGQPLDVPQAMP 599
TSGFDMAPP A TLPGA AGQ D PQ MP
Sbjct: 123 SRESSRSRSKSKRTSGFDMAPPTAATLPGAVAGQVADAPQPMP 165
>gb|OVA00566.1| RNA recognition motif domain [Macleaya cordata]
Length = 547
Score = 63.5 bits (153), Expect = 3e-08
Identities = 49/159 (30%), Positives = 57/159 (35%), Gaps = 10/159 (6%)
Frame = +3
Query: 153 YNGDGEG----DQGGSSPYDVFEDRTSHHKQKFHESDRERLKTXXXXXXXXXXXXXXXXX 320
Y G+GE D GGSSPYD FEDR SH K SD ER +T
Sbjct: 8 YEGNGESYKGADHGGSSPYDAFEDRDSHIKHNSRGSDHERSRTKERDRDKEKDRERRHRD 67
Query: 321 YQXXXXXXXXXXXXXXXXXXXXNHDYGRRQDYNXXXXXXXXXXXXXPSVE----XXXXXX 488
Y+ + DY R +DY+ S +
Sbjct: 68 YKDRSVRDERGRDKADDYDRHRSRDYDRHRDYDRDRDRRHKHRSRSRSRDRSRNRSRSRS 127
Query: 489 XXXXXXXXTSGFDMAPPVATTLPGAA--GQPLDVPQAMP 599
SGFDMAPP +PGAA GQ VP MP
Sbjct: 128 RSRSKSKRASGFDMAPPSTAMVPGAAVPGQVPGVPPTMP 166
>gb|OVA13223.1| RNA recognition motif domain [Macleaya cordata]
Length = 537
Score = 62.8 bits (151), Expect = 5e-08
Identities = 47/158 (29%), Positives = 59/158 (37%), Gaps = 9/158 (5%)
Frame = +3
Query: 153 YNGDGEGDQG-----GSSPYDVFEDRTSHHKQKFHESDRERLKTXXXXXXXXXXXXXXXX 317
Y+G+GEG +G GSSPYDVFEDR SH K SD ER +
Sbjct: 4 YDGNGEGLKGEDHGGGSSPYDVFEDRDSHRKHNSRGSDHERSRGNERGHYRQKDSDRHRR 63
Query: 318 XYQXXXXXXXXXXXXXXXXXXXXNHDYGRRQDYNXXXXXXXXXXXXXPSV----EXXXXX 485
Y N DY R+Q+Y+ PS +
Sbjct: 64 DYNDRSVREERGRNESNGYDRRRNRDYDRQQNYDKDRDRKHRHRSRSPSKGTSRDRSRSP 123
Query: 486 XXXXXXXXXTSGFDMAPPVATTLPGAAGQPLDVPQAMP 599
TSGFDMAPP +T +PG +P+ P
Sbjct: 124 SSSRSKSKRTSGFDMAPP-STAVPGQLPGVPQIPEMFP 160
>ref|XP_010242964.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Nelumbo nucifera]
Length = 555
Score = 57.4 bits (137), Expect = 4e-06
Identities = 50/178 (28%), Positives = 64/178 (35%), Gaps = 21/178 (11%)
Frame = +3
Query: 129 MSRHDRRRYNGDGEG-------------DQGGSSPYDVFEDRTSHHKQKFHESDRERLKT 269
MS +D R Y+G+G+ D GGSSPYDVF+D S +K + SD +R +
Sbjct: 1 MSDYDSR-YDGNGDAYRPSGSSAENKWADHGGSSPYDVFDDPDSLNKHTYRGSDHDRSRN 59
Query: 270 XXXXXXXXXXXXXXXXXYQXXXXXXXXXXXXXXXXXXXXNHDYGRRQDYNXXXXXXXXXX 449
Y+ + DY R +DY+
Sbjct: 60 REWDRDRERDRDRHHRDYKDRSARDERGRDKYDDYDRQRSRDYDRHRDYDRDRSRRHKHR 119
Query: 450 XXXPSVE------XXXXXXXXXXXXXXTSGFDMAPPVATTLPGAA--GQPLDVPQAMP 599
S + SGFDMAPP A LPGAA G L VPQ P
Sbjct: 120 SPSRSRDRSRNRSRSRSRSRSRSKSKRQSGFDMAPPGAAMLPGAAAPGAQLGVPQTTP 177
>ref|XP_010242963.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Nelumbo nucifera]
Length = 556
Score = 57.4 bits (137), Expect = 4e-06
Identities = 50/178 (28%), Positives = 64/178 (35%), Gaps = 21/178 (11%)
Frame = +3
Query: 129 MSRHDRRRYNGDGEG-------------DQGGSSPYDVFEDRTSHHKQKFHESDRERLKT 269
MS +D R Y+G+G+ D GGSSPYDVF+D S +K + SD +R +
Sbjct: 1 MSDYDSR-YDGNGDAYRPSGSSAENKWADHGGSSPYDVFDDPDSLNKHTYRGSDHDRSRN 59
Query: 270 XXXXXXXXXXXXXXXXXYQXXXXXXXXXXXXXXXXXXXXNHDYGRRQDYNXXXXXXXXXX 449
Y+ + DY R +DY+
Sbjct: 60 REWDRDRERDRDRHHRDYKDRSARDERGRDKYDDYDRQRSRDYDRHRDYDRDRSRRHKHR 119
Query: 450 XXXPSVE------XXXXXXXXXXXXXXTSGFDMAPPVATTLPGAA--GQPLDVPQAMP 599
S + SGFDMAPP A LPGAA G L VPQ P
Sbjct: 120 SPSRSRDRSRNRSRSRSRSRSRSKSKRQSGFDMAPPGAAMLPGAAAPGAQLGVPQTTP 177