BLASTX nr result

ID: Acanthopanax24_contig00021550 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00021550
         (837 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022037241.1| small RNA-binding protein 11, chloroplastic-...    96   3e-21
ref|XP_018823237.1| PREDICTED: glycine-rich RNA-binding protein ...    94   9e-21
ref|XP_015893665.1| PREDICTED: cold-inducible RNA-binding protei...    94   9e-21
gb|PLY87611.1| hypothetical protein LSAT_8X77780 [Lactuca sativa]      94   1e-20
ref|XP_018823236.1| PREDICTED: cold-inducible RNA-binding protei...    94   1e-20
ref|XP_023761043.1| cold-inducible RNA-binding protein-like [Lac...    94   1e-20
ref|XP_017234688.1| PREDICTED: glycine-rich RNA-binding protein ...    92   6e-20
ref|XP_017234687.1| PREDICTED: glycine-rich RNA-binding protein ...    92   8e-20
ref|XP_021887634.1| small RNA-binding protein 11, chloroplastic ...    90   3e-19
ref|XP_021278723.1| small RNA-binding protein 11, chloroplastic-...    90   4e-19
ref|XP_017982698.1| PREDICTED: cold-inducible RNA-binding protei...    90   4e-19
ref|XP_010112904.1| organelle RRM domain-containing protein 6, c...    89   8e-19
gb|KZN05164.1| hypothetical protein DCAR_006001 [Daucus carota s...    92   1e-18
ref|XP_016547697.1| PREDICTED: cold-inducible RNA-binding protei...    89   1e-18
ref|XP_022731538.1| organelle RRM domain-containing protein 6, c...    88   2e-18
ref|XP_017649799.1| PREDICTED: cold-inducible RNA-binding protei...    88   2e-18
ref|XP_023876274.1| organelle RRM domain-containing protein 6, c...    88   2e-18
ref|XP_015058813.1| PREDICTED: cold-inducible RNA-binding protei...    88   2e-18
gb|PPD73301.1| hypothetical protein GOBAR_DD29777 [Gossypium bar...    87   2e-18
ref|XP_009799909.1| PREDICTED: cold-inducible RNA-binding protei...    87   2e-18

>ref|XP_022037241.1| small RNA-binding protein 11, chloroplastic-like [Helianthus
           annuus]
 gb|OTG24221.1| putative RNA-binding (RRM/RBD/RNP motifs) family protein
           [Helianthus annuus]
          Length = 97

 Score = 95.5 bits (236), Expect = 3e-21
 Identities = 45/56 (80%), Positives = 52/56 (92%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSF+TT +DLKRLFSPFG +TEARLV+D K QRPKGFGFVTF+S+V+AQNALKAMN
Sbjct: 15  LSFYTTPKDLKRLFSPFGAITEARLVVDPKTQRPKGFGFVTFESDVDAQNALKAMN 70


>ref|XP_018823237.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           [Juglans regia]
          Length = 103

 Score = 94.4 bits (233), Expect = 9e-21
 Identities = 47/56 (83%), Positives = 49/56 (87%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSFFTTN+ LK LFSPFG VTEARLV D + QRPKGFGFVTF SEVEAQNALKAMN
Sbjct: 34  LSFFTTNEKLKTLFSPFGEVTEARLVKDPRTQRPKGFGFVTFDSEVEAQNALKAMN 89


>ref|XP_015893665.1| PREDICTED: cold-inducible RNA-binding protein [Ziziphus jujuba]
          Length = 94

 Score = 94.0 bits (232), Expect = 9e-21
 Identities = 45/56 (80%), Positives = 50/56 (89%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSF+TTN+ LK+LFSPFG VTEARLV D K QRPKGFGFVTF SEVEA+NALKA+N
Sbjct: 14  LSFYTTNEQLKKLFSPFGAVTEARLVRDPKTQRPKGFGFVTFDSEVEARNALKALN 69


>gb|PLY87611.1| hypothetical protein LSAT_8X77780 [Lactuca sativa]
          Length = 87

 Score = 93.6 bits (231), Expect = 1e-20
 Identities = 42/56 (75%), Positives = 53/56 (94%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSF+TT++DLKRLFSPFG +TEARLV+D + QRPKGFGFV+F+S+V+AQNA+KAMN
Sbjct: 5   LSFYTTHKDLKRLFSPFGAITEARLVVDSRTQRPKGFGFVSFESDVDAQNAMKAMN 60


>ref|XP_018823236.1| PREDICTED: cold-inducible RNA-binding protein-like [Juglans regia]
          Length = 113

 Score = 94.4 bits (233), Expect = 1e-20
 Identities = 47/56 (83%), Positives = 49/56 (87%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSFFTTN+ LK LFSPFG VTEARLV D + QRPKGFGFVTF SEVEAQNALKAMN
Sbjct: 34  LSFFTTNEKLKTLFSPFGEVTEARLVKDPRTQRPKGFGFVTFDSEVEAQNALKAMN 89


>ref|XP_023761043.1| cold-inducible RNA-binding protein-like [Lactuca sativa]
          Length = 97

 Score = 93.6 bits (231), Expect = 1e-20
 Identities = 42/56 (75%), Positives = 53/56 (94%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSF+TT++DLKRLFSPFG +TEARLV+D + QRPKGFGFV+F+S+V+AQNA+KAMN
Sbjct: 15  LSFYTTHKDLKRLFSPFGAITEARLVVDSRTQRPKGFGFVSFESDVDAQNAMKAMN 70


>ref|XP_017234688.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           isoform X2 [Daucus carota subsp. sativus]
          Length = 90

 Score = 91.7 bits (226), Expect = 6e-20
 Identities = 44/56 (78%), Positives = 52/56 (92%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSF+TTNQ+LK+LFS FG VTEA+LV+D+K QRPKGFGFVTF+SE EA+NALKAMN
Sbjct: 14  LSFYTTNQELKKLFSRFGSVTEAKLVIDEKTQRPKGFGFVTFKSEDEARNALKAMN 69


>ref|XP_017234687.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           isoform X1 [Daucus carota subsp. sativus]
          Length = 97

 Score = 91.7 bits (226), Expect = 8e-20
 Identities = 44/56 (78%), Positives = 52/56 (92%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSF+TTNQ+LK+LFS FG VTEA+LV+D+K QRPKGFGFVTF+SE EA+NALKAMN
Sbjct: 14  LSFYTTNQELKKLFSRFGSVTEAKLVIDEKTQRPKGFGFVTFKSEDEARNALKAMN 69


>ref|XP_021887634.1| small RNA-binding protein 11, chloroplastic [Carica papaya]
          Length = 87

 Score = 89.7 bits (221), Expect = 3e-19
 Identities = 41/56 (73%), Positives = 52/56 (92%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSF+ TNQ LK+LFSPFG+VTEARLV+D++ +RPKGFGFVTF+SE++AQ AL+AMN
Sbjct: 14  LSFYITNQQLKQLFSPFGVVTEARLVIDRETRRPKGFGFVTFESEIDAQKALEAMN 69


>ref|XP_021278723.1| small RNA-binding protein 11, chloroplastic-like [Herrania
           umbratica]
          Length = 94

 Score = 89.7 bits (221), Expect = 4e-19
 Identities = 43/56 (76%), Positives = 49/56 (87%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSFFTT+QDLK LFSPFG+V EA+L+ D K QRPKGFGFVTF++E EAQ ALKAMN
Sbjct: 14  LSFFTTHQDLKTLFSPFGVVKEAKLIRDPKTQRPKGFGFVTFETENEAQKALKAMN 69


>ref|XP_017982698.1| PREDICTED: cold-inducible RNA-binding protein [Theobroma cacao]
          Length = 94

 Score = 89.7 bits (221), Expect = 4e-19
 Identities = 43/56 (76%), Positives = 49/56 (87%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSFFTT+QDLK LFSPFG+V EA+L+ D K QRPKGFGFVTF++E EAQ ALKAMN
Sbjct: 14  LSFFTTHQDLKTLFSPFGVVKEAKLIRDPKTQRPKGFGFVTFETENEAQKALKAMN 69


>ref|XP_010112904.1| organelle RRM domain-containing protein 6, chloroplastic [Morus
           notabilis]
 gb|EXC35053.1| Cold-inducible RNA-binding protein [Morus notabilis]
          Length = 94

 Score = 89.0 bits (219), Expect = 8e-19
 Identities = 43/56 (76%), Positives = 49/56 (87%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LS +TTN+ LK+LFSPFG V EARLV+D K QRPKGFGFVT++SEVEAQ ALKAMN
Sbjct: 14  LSSYTTNEHLKKLFSPFGEVLEARLVLDSKTQRPKGFGFVTYESEVEAQKALKAMN 69


>gb|KZN05164.1| hypothetical protein DCAR_006001 [Daucus carota subsp. sativus]
          Length = 194

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 44/56 (78%), Positives = 52/56 (92%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSF+TTNQ+LK+LFS FG VTEA+LV+D+K QRPKGFGFVTF+SE EA+NALKAMN
Sbjct: 107 LSFYTTNQELKKLFSRFGSVTEAKLVIDEKTQRPKGFGFVTFKSEDEARNALKAMN 162


>ref|XP_016547697.1| PREDICTED: cold-inducible RNA-binding protein-like [Capsicum
           annuum]
          Length = 94

 Score = 88.6 bits (218), Expect = 1e-18
 Identities = 41/56 (73%), Positives = 48/56 (85%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSF+TTN+ LK LFSPFG VTEARLV D + QRPKGFGFVTF+SE +AQNAL ++N
Sbjct: 12  LSFYTTNEQLKNLFSPFGAVTEARLVKDPRTQRPKGFGFVTFESEADAQNALNSLN 67


>ref|XP_022731538.1| organelle RRM domain-containing protein 6, chloroplastic-like
           [Durio zibethinus]
          Length = 94

 Score = 87.8 bits (216), Expect = 2e-18
 Identities = 41/56 (73%), Positives = 49/56 (87%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSFFTT+Q+LK LFSPFG+V EA L+ D K QRPKGFGFVT+++E+EAQ ALKAMN
Sbjct: 14  LSFFTTHQELKTLFSPFGVVKEANLIRDPKTQRPKGFGFVTYETEMEAQKALKAMN 69


>ref|XP_017649799.1| PREDICTED: cold-inducible RNA-binding protein [Gossypium arboreum]
 gb|KHG10601.1| Cold-inducible RNA-binding [Gossypium arboreum]
          Length = 94

 Score = 87.8 bits (216), Expect = 2e-18
 Identities = 41/56 (73%), Positives = 48/56 (85%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSFFT +Q+LK LF+PFG+V EARL+ D K QRPKGFGFVTF++E EAQ ALKAMN
Sbjct: 14  LSFFTNHQELKTLFAPFGVVKEARLIRDSKTQRPKGFGFVTFETEAEAQKALKAMN 69


>ref|XP_023876274.1| organelle RRM domain-containing protein 6, chloroplastic-like
           [Quercus suber]
 gb|POE81454.1| cold-inducible rna-binding protein [Quercus suber]
          Length = 96

 Score = 87.8 bits (216), Expect = 2e-18
 Identities = 43/56 (76%), Positives = 49/56 (87%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LS +TTN+ LKRLFS FG+VTEARLV D + QRPKGFGFVT++SEVEAQ ALKAMN
Sbjct: 14  LSSYTTNEHLKRLFSRFGVVTEARLVKDPRTQRPKGFGFVTYESEVEAQKALKAMN 69


>ref|XP_015058813.1| PREDICTED: cold-inducible RNA-binding protein [Solanum pennellii]
 ref|XP_019066554.1| PREDICTED: cold-inducible RNA-binding protein-like [Solanum
           lycopersicum]
          Length = 111

 Score = 88.2 bits (217), Expect = 2e-18
 Identities = 40/56 (71%), Positives = 50/56 (89%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSF+TT++ LK+LFSPFG+VTEARLV D + QRPKGFGFVTF+SE +AQNAL ++N
Sbjct: 29  LSFYTTSEQLKKLFSPFGVVTEARLVKDPRTQRPKGFGFVTFESEADAQNALNSLN 84


>gb|PPD73301.1| hypothetical protein GOBAR_DD29777 [Gossypium barbadense]
 gb|PPR83735.1| hypothetical protein GOBAR_AA36977 [Gossypium barbadense]
          Length = 87

 Score = 87.4 bits (215), Expect = 2e-18
 Identities = 41/56 (73%), Positives = 48/56 (85%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSFFT +Q+LK LF+PFG+V EARL+ D K QRPKGFGFVTF++E EAQ ALKAMN
Sbjct: 14  LSFFTNHQELKTLFAPFGVVKEARLIRDPKTQRPKGFGFVTFETEAEAQKALKAMN 69


>ref|XP_009799909.1| PREDICTED: cold-inducible RNA-binding protein [Nicotiana
           sylvestris]
 ref|XP_016456540.1| PREDICTED: cold-inducible RNA-binding protein-like [Nicotiana
           tabacum]
          Length = 76

 Score = 87.0 bits (214), Expect = 2e-18
 Identities = 40/56 (71%), Positives = 50/56 (89%)
 Frame = -2

Query: 809 LSFFTTNQDLKRLFSPFGLVTEARLVMDQKKQRPKGFGFVTFQSEVEAQNALKAMN 642
           LSF+TTN+ LK+LFSPFG+VTEARLV D + QRPKGFGFVTF+SE +A+NAL ++N
Sbjct: 12  LSFYTTNERLKKLFSPFGVVTEARLVEDPRTQRPKGFGFVTFESEADARNALNSIN 67


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