BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00021335
         (464 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97911.1| hypothetical protein Ccrd_023870 [Cynara carduncu...    87   6e-19
ref|XP_024031548.1| sm-like protein LSM1B [Morus notabilis]            85   4e-18
ref|XP_004303709.1| PREDICTED: sm-like protein LSM1B [Fragaria v...    84   5e-18
ref|XP_007215150.1| sm-like protein LSM1B [Prunus persica] >gi|6...    84   5e-18
gb|KVI05858.1| Like-Sm (LSM) domain-containing protein [Cynara c...    84   6e-18
ref|XP_010041873.1| PREDICTED: sm-like protein LSM1B, partial [E...    83   7e-18
ref|XP_024181470.1| sm-like protein LSM1B [Rosa chinensis] >gi|1...    84   7e-18
ref|XP_021680141.1| sm-like protein LSM1B isoform X4 [Hevea bras...    84   8e-18
gb|PKI41657.1| hypothetical protein CRG98_037964 [Punica granatum]     83   9e-18
gb|PON93445.1| LSM domain/archaea-type [Trema orientalis]              84   1e-17
gb|PON43597.1| LSM domain/archaea-type [Parasponia andersonii]         84   1e-17
ref|XP_023772681.1| sm-like protein LSM1B [Lactuca sativa] >gi|1...    84   1e-17
ref|XP_021638923.1| sm-like protein LSM1B [Hevea brasiliensis]         84   1e-17
ref|XP_021680126.1| sm-like protein LSM1B isoform X1 [Hevea bras...    84   1e-17
ref|XP_022033522.1| sm-like protein LSM1B [Helianthus annuus] >g...    84   1e-17
ref|XP_021611176.1| sm-like protein LSM1B [Manihot esculenta] >g...    84   1e-17
ref|XP_002271476.1| PREDICTED: sm-like protein LSM1B [Vitis vini...    84   1e-17
ref|XP_017442402.1| PREDICTED: sm-like protein LSM1B [Vigna angu...    84   1e-17
ref|XP_014516657.1| sm-like protein LSM1B isoform X2 [Vigna radi...    84   1e-17
ref|XP_012068855.1| sm-like protein LSM1B [Jatropha curcas] >gi|...    84   1e-17

>gb|KVH97911.1| hypothetical protein Ccrd_023870 [Cynara cardunculus var. scolymus]
          Length = 150

 Score = 87.4 bits (215), Expect = 6e-19
 Identities = 46/66 (69%), Positives = 50/66 (75%)
 Frame = -1

Query: 200 KNLSSMSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERV 21
           K+LS+MSWAGPEDI+LSTSLASY                GILRSFDQFANAVLEGACERV
Sbjct: 18  KSLSAMSWAGPEDIHLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERV 77

Query: 20  IVGELY 3
           IVG+LY
Sbjct: 78  IVGDLY 83


>ref|XP_024031548.1| sm-like protein LSM1B [Morus notabilis]
          Length = 128

 Score = 84.7 bits (208), Expect = 4e-18
 Identities = 45/61 (73%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPEDIYLSTSLASY                GILRSFDQFANAVLEGACERVIVGEL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>ref|XP_004303709.1| PREDICTED: sm-like protein LSM1B [Fragaria vesca subsp. vesca]
          Length = 128

 Score = 84.3 bits (207), Expect = 5e-18
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPED+YLSTSLASY                GILRSFDQFANAVLEGACERVIVGEL
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKILVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>ref|XP_007215150.1| sm-like protein LSM1B [Prunus persica]
 ref|XP_008228168.1| PREDICTED: sm-like protein LSM1B [Prunus mume]
 ref|XP_021828447.1| sm-like protein LSM1B [Prunus avium]
 gb|ONI15339.1| hypothetical protein PRUPE_3G038200 [Prunus persica]
          Length = 128

 Score = 84.3 bits (207), Expect = 5e-18
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPED+YLSTSLASY                GILRSFDQFANAVLEGACERVIVGEL
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>gb|KVI05858.1| Like-Sm (LSM) domain-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 107

 Score = 83.6 bits (205), Expect = 6e-18
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPEDIYLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>ref|XP_010041873.1| PREDICTED: sm-like protein LSM1B, partial [Eucalyptus grandis]
          Length = 100

 Score = 83.2 bits (204), Expect = 7e-18
 Identities = 43/61 (70%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPED+YLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>ref|XP_024181470.1| sm-like protein LSM1B [Rosa chinensis]
 gb|PRQ51602.1| putative sm-like protein Lsm1 [Rosa chinensis]
          Length = 128

 Score = 84.0 bits (206), Expect = 7e-18
 Identities = 43/61 (70%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPED+YLSTSLASY                G+LRSFDQFANAVLEGACERVIVGEL
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERVIVGEL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>ref|XP_021680141.1| sm-like protein LSM1B isoform X4 [Hevea brasiliensis]
 ref|XP_021680147.1| sm-like protein LSM1B isoform X5 [Hevea brasiliensis]
          Length = 119

 Score = 83.6 bits (205), Expect = 8e-18
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPEDIYLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>gb|PKI41657.1| hypothetical protein CRG98_037964 [Punica granatum]
          Length = 107

 Score = 83.2 bits (204), Expect = 9e-18
 Identities = 43/61 (70%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPED+YLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>gb|PON93445.1| LSM domain/archaea-type [Trema orientalis]
          Length = 128

 Score = 83.6 bits (205), Expect = 1e-17
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPEDIYLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>gb|PON43597.1| LSM domain/archaea-type [Parasponia andersonii]
          Length = 128

 Score = 83.6 bits (205), Expect = 1e-17
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPEDIYLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>ref|XP_023772681.1| sm-like protein LSM1B [Lactuca sativa]
 gb|PLY78613.1| hypothetical protein LSAT_4X92601 [Lactuca sativa]
          Length = 128

 Score = 83.6 bits (205), Expect = 1e-17
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPEDIYLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>ref|XP_021638923.1| sm-like protein LSM1B [Hevea brasiliensis]
          Length = 128

 Score = 83.6 bits (205), Expect = 1e-17
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPEDIYLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>ref|XP_021680126.1| sm-like protein LSM1B isoform X1 [Hevea brasiliensis]
 ref|XP_021680132.1| sm-like protein LSM1B isoform X2 [Hevea brasiliensis]
 ref|XP_021680137.1| sm-like protein LSM1B isoform X3 [Hevea brasiliensis]
          Length = 128

 Score = 83.6 bits (205), Expect = 1e-17
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPEDIYLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>ref|XP_022033522.1| sm-like protein LSM1B [Helianthus annuus]
 gb|OTG26917.1| putative small nuclear ribonucleoprotein family protein [Helianthus
           annuus]
          Length = 128

 Score = 83.6 bits (205), Expect = 1e-17
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPEDIYLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>ref|XP_021611176.1| sm-like protein LSM1B [Manihot esculenta]
 gb|OAY53239.1| hypothetical protein MANES_04G147400 [Manihot esculenta]
          Length = 128

 Score = 83.6 bits (205), Expect = 1e-17
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPEDIYLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>ref|XP_002271476.1| PREDICTED: sm-like protein LSM1B [Vitis vinifera]
 emb|CAN62239.1| hypothetical protein VITISV_033727 [Vitis vinifera]
 emb|CBI35847.3| unnamed protein product, partial [Vitis vinifera]
          Length = 128

 Score = 83.6 bits (205), Expect = 1e-17
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPEDIYLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>ref|XP_017442402.1| PREDICTED: sm-like protein LSM1B [Vigna angularis]
 dbj|BAT98276.1| hypothetical protein VIGAN_09191900 [Vigna angularis var.
           angularis]
          Length = 128

 Score = 83.6 bits (205), Expect = 1e-17
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPEDIYLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>ref|XP_014516657.1| sm-like protein LSM1B isoform X2 [Vigna radiata var. radiata]
          Length = 128

 Score = 83.6 bits (205), Expect = 1e-17
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPEDIYLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61


>ref|XP_012068855.1| sm-like protein LSM1B [Jatropha curcas]
 gb|KDP40677.1| hypothetical protein JCGZ_24676 [Jatropha curcas]
          Length = 128

 Score = 83.6 bits (205), Expect = 1e-17
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEL 6
           MSWAGPEDIYLSTSLASY                GILRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 5   Y 3
           Y
Sbjct: 61  Y 61