BLASTX nr result
ID: Acanthopanax24_contig00020852
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00020852
(498 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_019196264.1| PREDICTED: mediator of RNA polymerase II tra... 93 2e-20
ref|XP_021828382.1| mediator of RNA polymerase II transcription ... 93 2e-20
ref|XP_008234028.1| PREDICTED: mediator of RNA polymerase II tra... 93 2e-20
ref|XP_017244740.1| PREDICTED: mediator of RNA polymerase II tra... 92 5e-20
ref|XP_019200580.1| PREDICTED: mediator of RNA polymerase II tra... 90 3e-19
ref|XP_007218430.1| mediator of RNA polymerase II transcription ... 90 3e-19
ref|XP_021828381.1| mediator of RNA polymerase II transcription ... 89 1e-18
ref|XP_023908170.1| mediator of RNA polymerase II transcription ... 89 1e-18
ref|XP_021828380.1| mediator of RNA polymerase II transcription ... 88 2e-18
gb|POF16106.1| mediator of rna polymerase ii transcription subun... 89 3e-18
ref|XP_010269824.1| PREDICTED: mediator of RNA polymerase II tra... 86 5e-18
ref|XP_010269818.1| PREDICTED: mediator of RNA polymerase II tra... 86 1e-17
ref|XP_016550971.1| PREDICTED: mediator of RNA polymerase II tra... 86 1e-17
ref|XP_007218431.1| mediator of RNA polymerase II transcription ... 86 2e-17
ref|XP_021614709.1| mediator of RNA polymerase II transcription ... 85 3e-17
emb|CDP19848.1| unnamed protein product [Coffea canephora] 85 3e-17
dbj|GAY60624.1| hypothetical protein CUMW_203510 [Citrus unshiu]... 83 4e-17
ref|XP_015067978.1| PREDICTED: mediator of RNA polymerase II tra... 84 6e-17
ref|XP_015169290.1| PREDICTED: mediator of RNA polymerase II tra... 84 6e-17
ref|XP_004235202.1| PREDICTED: mediator of RNA polymerase II tra... 84 6e-17
>ref|XP_019196264.1| PREDICTED: mediator of RNA polymerase II transcription subunit
31-like [Ipomoea nil]
Length = 197
Score = 92.8 bits (229), Expect = 2e-20
Identities = 48/86 (55%), Positives = 53/86 (61%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPEP +APP A GP+PSPMQYA
Sbjct: 127 NNRLKHILPRPLPEPASAPPTSAPP---------------VPLPPTGAAAGPVPSPMQYA 171
Query: 316 IPPGNALAKNDPRNSGVDRRKRKKDG 239
IP G+++AKNDPRN G DRRKRKKDG
Sbjct: 172 IPTGSSIAKNDPRNPGADRRKRKKDG 197
>ref|XP_021828382.1| mediator of RNA polymerase II transcription subunit 31 isoform X3
[Prunus avium]
ref|XP_021828383.1| mediator of RNA polymerase II transcription subunit 31 isoform X3
[Prunus avium]
ref|XP_021828384.1| mediator of RNA polymerase II transcription subunit 31 isoform X3
[Prunus avium]
Length = 200
Score = 92.8 bits (229), Expect = 2e-20
Identities = 48/86 (55%), Positives = 52/86 (60%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPEPV APP P PSPMQYA
Sbjct: 123 NNRLKHILPRPLPEPVAAPPTPAPPQQPVPPVPATTVSVTAN--------APAPSPMQYA 174
Query: 316 IPPGNALAKNDPRNSGVDRRKRKKDG 239
+PPG+ALAKN+ RNSGVDRRKRKK+G
Sbjct: 175 VPPGSALAKNEARNSGVDRRKRKKEG 200
>ref|XP_008234028.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
[Prunus mume]
ref|XP_008234029.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
[Prunus mume]
ref|XP_008234030.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
[Prunus mume]
Length = 200
Score = 92.8 bits (229), Expect = 2e-20
Identities = 48/86 (55%), Positives = 52/86 (60%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPEPV APP P PSPMQYA
Sbjct: 123 NNRLKHILPRPLPEPVAAPPTPAPPQQPVPPVPATTVSVTAN--------APAPSPMQYA 174
Query: 316 IPPGNALAKNDPRNSGVDRRKRKKDG 239
+PPG+ALAKN+ RNSGVDRRKRKK+G
Sbjct: 175 VPPGSALAKNEARNSGVDRRKRKKEG 200
>ref|XP_017244740.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
[Daucus carota subsp. sativus]
gb|KZM97991.1| hypothetical protein DCAR_014647 [Daucus carota subsp. sativus]
Length = 202
Score = 92.0 bits (227), Expect = 5e-20
Identities = 48/83 (57%), Positives = 52/83 (62%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPE V T QA APPP G +PSPM YA
Sbjct: 123 NNRLKHILPRPLPESVATPQAAAPPPAPATSRASTIASSTPIPTSA---AGSIPSPMPYA 179
Query: 316 IPPGNALAKNDPRNSGVDRRKRK 248
IP G++LAKNDPRNSGVDRRK+K
Sbjct: 180 IPSGSSLAKNDPRNSGVDRRKKK 202
>ref|XP_019200580.1| PREDICTED: mediator of RNA polymerase II transcription subunit
31-like [Ipomoea nil]
Length = 198
Score = 89.7 bits (221), Expect = 3e-19
Identities = 47/86 (54%), Positives = 52/86 (60%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPEP +APP A GP+PSPMQYA
Sbjct: 127 NNRLKHILPRPLPEPESAPPTSAPP--------------IPLPPTAATATGPVPSPMQYA 172
Query: 316 IPPGNALAKNDPRNSGVDRRKRKKDG 239
IP G+++AKNDPRN DRRKRKKDG
Sbjct: 173 IPTGSSIAKNDPRNPAADRRKRKKDG 198
>ref|XP_007218430.1| mediator of RNA polymerase II transcription subunit 31 isoform X2
[Prunus persica]
ref|XP_020414205.1| mediator of RNA polymerase II transcription subunit 31 isoform X2
[Prunus persica]
gb|ONI24931.1| hypothetical protein PRUPE_2G269700 [Prunus persica]
gb|ONI24932.1| hypothetical protein PRUPE_2G269700 [Prunus persica]
gb|ONI24933.1| hypothetical protein PRUPE_2G269700 [Prunus persica]
Length = 200
Score = 89.7 bits (221), Expect = 3e-19
Identities = 47/86 (54%), Positives = 50/86 (58%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPEPV APP P PSPMQY
Sbjct: 123 NNRLKHILPRPLPEPVAAPPTPAPPQQPVPPVPATTVSVTAN--------APAPSPMQYV 174
Query: 316 IPPGNALAKNDPRNSGVDRRKRKKDG 239
PPG+ALAKN+ RNSGVDRRKRKK+G
Sbjct: 175 APPGSALAKNEARNSGVDRRKRKKEG 200
>ref|XP_021828381.1| mediator of RNA polymerase II transcription subunit 31 isoform X2
[Prunus avium]
Length = 202
Score = 88.6 bits (218), Expect = 1e-18
Identities = 46/84 (54%), Positives = 50/84 (59%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPEPV APP P PSPMQYA
Sbjct: 123 NNRLKHILPRPLPEPVAAPPTPAPPQQPVPPVPATTVSVTAN--------APAPSPMQYA 174
Query: 316 IPPGNALAKNDPRNSGVDRRKRKK 245
+PPG+ALAKN+ RNSGVDRRKRK+
Sbjct: 175 VPPGSALAKNEARNSGVDRRKRKR 198
>ref|XP_023908170.1| mediator of RNA polymerase II transcription subunit 31-like
[Quercus suber]
Length = 206
Score = 88.6 bits (218), Expect = 1e-18
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
+NRLKHI+PRPLPEPVV A+APP P PSPMQYA
Sbjct: 125 SNRLKHIMPRPLPEPVVAPPASAPPQPPVQPVPPAPATTIAVTVPP----APAPSPMQYA 180
Query: 316 IPPGNALAKNDPRNSGVDRRKRKKDG 239
IP G+ALAKND R+SGV+RRKRKK+G
Sbjct: 181 IPHGSALAKNDMRSSGVERRKRKKEG 206
>ref|XP_021828380.1| mediator of RNA polymerase II transcription subunit 31 isoform X1
[Prunus avium]
Length = 202
Score = 87.8 bits (216), Expect = 2e-18
Identities = 46/83 (55%), Positives = 49/83 (59%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPEPV APP P PSPMQYA
Sbjct: 123 NNRLKHILPRPLPEPVAAPPTPAPPQQPVPPVPATTVSVTAN--------APAPSPMQYA 174
Query: 316 IPPGNALAKNDPRNSGVDRRKRK 248
+PPG+ALAKN+ RNSGVDRRKRK
Sbjct: 175 VPPGSALAKNEARNSGVDRRKRK 197
>gb|POF16106.1| mediator of rna polymerase ii transcription subunit 31 [Quercus
suber]
Length = 252
Score = 88.6 bits (218), Expect = 3e-18
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
+NRLKHI+PRPLPEPVV A+APP P PSPMQYA
Sbjct: 171 SNRLKHIMPRPLPEPVVAPPASAPPQPPVQPVPPAPATTIAVTVPP----APAPSPMQYA 226
Query: 316 IPPGNALAKNDPRNSGVDRRKRKKDG 239
IP G+ALAKND R+SGV+RRKRKK+G
Sbjct: 227 IPHGSALAKNDMRSSGVERRKRKKEG 252
>ref|XP_010269824.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X2 [Nelumbo nucifera]
Length = 171
Score = 85.9 bits (211), Expect = 5e-18
Identities = 46/90 (51%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLP----SP 329
NNRLKHILPRPLPEPV A PPP A P SP
Sbjct: 82 NNRLKHILPRPLPEPVAAPPAPIPPPAPLPATNVPVAASPAPVLVPVPAPAAPPASALSP 141
Query: 328 MQYAIPPGNALAKNDPRNSGVDRRKRKKDG 239
M Y +PPG L+KNDPRNSG+DRRKRKK+G
Sbjct: 142 MPYGLPPGPTLSKNDPRNSGIDRRKRKKEG 171
>ref|XP_010269818.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X1 [Nelumbo nucifera]
ref|XP_010269819.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X1 [Nelumbo nucifera]
ref|XP_010269821.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X1 [Nelumbo nucifera]
ref|XP_010269822.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X1 [Nelumbo nucifera]
ref|XP_010269823.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X1 [Nelumbo nucifera]
ref|XP_019054844.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X1 [Nelumbo nucifera]
ref|XP_019054845.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X1 [Nelumbo nucifera]
ref|XP_019054846.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X1 [Nelumbo nucifera]
Length = 211
Score = 85.9 bits (211), Expect = 1e-17
Identities = 46/90 (51%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLP----SP 329
NNRLKHILPRPLPEPV A PPP A P SP
Sbjct: 122 NNRLKHILPRPLPEPVAAPPAPIPPPAPLPATNVPVAASPAPVLVPVPAPAAPPASALSP 181
Query: 328 MQYAIPPGNALAKNDPRNSGVDRRKRKKDG 239
M Y +PPG L+KNDPRNSG+DRRKRKK+G
Sbjct: 182 MPYGLPPGPTLSKNDPRNSGIDRRKRKKEG 211
>ref|XP_016550971.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X2 [Capsicum annuum]
Length = 199
Score = 85.5 bits (210), Expect = 1e-17
Identities = 46/86 (53%), Positives = 50/86 (58%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPEP +APP A+ SPMQYA
Sbjct: 118 NNRLKHILPRPLPEPATAPPTSAPPALLPTSVAPPAAPPTAPSPVTAAAL----SPMQYA 173
Query: 316 IPPGNALAKNDPRNSGVDRRKRKKDG 239
IPPG+ LAK DPRN+ VDRRKRKKDG
Sbjct: 174 IPPGSGLAKTDPRNASVDRRKRKKDG 199
>ref|XP_007218431.1| mediator of RNA polymerase II transcription subunit 31 isoform X1
[Prunus persica]
gb|ONI24930.1| hypothetical protein PRUPE_2G269700 [Prunus persica]
Length = 202
Score = 85.5 bits (210), Expect = 2e-17
Identities = 45/84 (53%), Positives = 48/84 (57%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPEPV APP P PSPMQY
Sbjct: 123 NNRLKHILPRPLPEPVAAPPTPAPPQQPVPPVPATTVSVTAN--------APAPSPMQYV 174
Query: 316 IPPGNALAKNDPRNSGVDRRKRKK 245
PPG+ALAKN+ RNSGVDRRKRK+
Sbjct: 175 APPGSALAKNEARNSGVDRRKRKR 198
>ref|XP_021614709.1| mediator of RNA polymerase II transcription subunit 31 [Manihot
esculenta]
gb|OAY48079.1| hypothetical protein MANES_06G129600 [Manihot esculenta]
Length = 206
Score = 84.7 bits (208), Expect = 3e-17
Identities = 46/85 (54%), Positives = 51/85 (60%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPEP T A+APP A+ P+P Y
Sbjct: 125 NNRLKHILPRPLPEPAPTPPASAPPAPPLQPMPPVLQTTIAMPTASASALSPMP----YG 180
Query: 316 IPPGNALAKNDPRNSGVDRRKRKKD 242
IPPG+ALAKND RNSGVDRRKRKK+
Sbjct: 181 IPPGSALAKNDMRNSGVDRRKRKKE 205
>emb|CDP19848.1| unnamed protein product [Coffea canephora]
Length = 206
Score = 84.7 bits (208), Expect = 3e-17
Identities = 48/93 (51%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSP---- 329
NNRLKHILPRPLPEP P P GP+PSP
Sbjct: 124 NNRLKHILPRPLPEPSAAPSIPTPVPPPPGPPTTLSAPSP----------GPVPSPAASA 173
Query: 328 ---MQYAIPPGNALAKNDPRNSGVDRRKRKKDG 239
MQYAIP G+A KNDPRNSGVDRRKRKKDG
Sbjct: 174 LSPMQYAIPSGSAFPKNDPRNSGVDRRKRKKDG 206
>dbj|GAY60624.1| hypothetical protein CUMW_203510 [Citrus unshiu]
dbj|GAY60625.1| hypothetical protein CUMW_203510 [Citrus unshiu]
Length = 156
Score = 83.2 bits (204), Expect = 4e-17
Identities = 45/86 (52%), Positives = 48/86 (55%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPEP A PP GP SPMQY
Sbjct: 80 NNRLKHILPRPLPEPSEAPPPAAAPPLPPAPPVLTPVTAAP---------GPALSPMQYG 130
Query: 316 IPPGNALAKNDPRNSGVDRRKRKKDG 239
IPPG+AL KND R+S +DRRKRKKDG
Sbjct: 131 IPPGSALMKNDMRSSSIDRRKRKKDG 156
>ref|XP_015067978.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X2 [Solanum pennellii]
Length = 200
Score = 84.0 bits (206), Expect = 6e-17
Identities = 47/86 (54%), Positives = 53/86 (61%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPEP T+ ++APP A+ SPMQYA
Sbjct: 120 NNRLKHILPRPLPEPA-TAPSSAPPASLPSSVAPPTAPPPAPTPVTAAAL----SPMQYA 174
Query: 316 IPPGNALAKNDPRNSGVDRRKRKKDG 239
IPPG+ LAK DPRN+ VDRRKRKKDG
Sbjct: 175 IPPGSGLAKTDPRNASVDRRKRKKDG 200
>ref|XP_015169290.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X2 [Solanum tuberosum]
ref|XP_015169291.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X2 [Solanum tuberosum]
Length = 200
Score = 84.0 bits (206), Expect = 6e-17
Identities = 47/86 (54%), Positives = 53/86 (61%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPEP T+ ++APP A+ SPMQYA
Sbjct: 120 NNRLKHILPRPLPEPA-TAPSSAPPASLPSSVAPPAAPPLAPTPVTAAAL----SPMQYA 174
Query: 316 IPPGNALAKNDPRNSGVDRRKRKKDG 239
IPPG+ LAK DPRN+ VDRRKRKKDG
Sbjct: 175 IPPGSGLAKTDPRNASVDRRKRKKDG 200
>ref|XP_004235202.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X2 [Solanum lycopersicum]
Length = 200
Score = 84.0 bits (206), Expect = 6e-17
Identities = 47/86 (54%), Positives = 53/86 (61%)
Frame = -3
Query: 496 NNRLKHILPRPLPEPVVTSQATAPPPXXXXXXXXXXXXXXXXXXXXXXAVGPLPSPMQYA 317
NNRLKHILPRPLPEP T+ ++APP A+ SPMQYA
Sbjct: 120 NNRLKHILPRPLPEPA-TAPSSAPPASLPSSVAPPTAPPPAPTPVTAAAL----SPMQYA 174
Query: 316 IPPGNALAKNDPRNSGVDRRKRKKDG 239
IPPG+ LAK DPRN+ VDRRKRKKDG
Sbjct: 175 IPPGSGLAKTDPRNASVDRRKRKKDG 200