BLASTX nr result

ID: Acanthopanax24_contig00020751 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00020751
         (522 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017247891.1| PREDICTED: uncharacterized protein LOC108219...    62   4e-08
gb|KZM97908.1| hypothetical protein DCAR_014730 [Daucus carota s...    62   4e-08
ref|XP_017228349.1| PREDICTED: uncharacterized protein LOC108192...    62   7e-08

>ref|XP_017247891.1| PREDICTED: uncharacterized protein LOC108219115 [Daucus carota
           subsp. sativus]
          Length = 504

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/100 (41%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
 Frame = -2

Query: 377 GPVDTVGQQTSTGTAFDPVGAVPTVVPIAQVDGLPPAQRR-GRPRKVKSVEVGAEAIGSL 201
           G VD           FDP+GAVP VVP+ +VDG    +RR GRP K++ V V AE I   
Sbjct: 168 GEVDGARSVMEVTAPFDPIGAVPNVVPMGEVDGGTVVKRRPGRPPKMQGVAVEAEPIAVA 227

Query: 200 VVSVGTADGLQNTVTKRRGRPPKVNNGPRPI-VNRGKGQP 84
              VG     +  V ++ GRPPKVN G   +   R  G+P
Sbjct: 228 EPGVGE----KVKVGRKPGRPPKVNKGTGVVPAGRRPGRP 263


>gb|KZM97908.1| hypothetical protein DCAR_014730 [Daucus carota subsp. sativus]
          Length = 575

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/100 (41%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
 Frame = -2

Query: 377 GPVDTVGQQTSTGTAFDPVGAVPTVVPIAQVDGLPPAQRR-GRPRKVKSVEVGAEAIGSL 201
           G VD           FDP+GAVP VVP+ +VDG    +RR GRP K++ V V AE I   
Sbjct: 239 GEVDGARSVMEVTAPFDPIGAVPNVVPMGEVDGGTVVKRRPGRPPKMQGVAVEAEPIAVA 298

Query: 200 VVSVGTADGLQNTVTKRRGRPPKVNNGPRPI-VNRGKGQP 84
              VG     +  V ++ GRPPKVN G   +   R  G+P
Sbjct: 299 EPGVGE----KVKVGRKPGRPPKVNKGTGVVPAGRRPGRP 334


>ref|XP_017228349.1| PREDICTED: uncharacterized protein LOC108192414 [Daucus carota
           subsp. sativus]
 gb|KZM80688.1| hypothetical protein DCAR_031739 [Daucus carota subsp. sativus]
          Length = 451

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 47/130 (36%), Positives = 63/130 (48%), Gaps = 16/130 (12%)
 Frame = -2

Query: 425 GGSGRVNTFSQFGQVGGPVDTVGQQTSTGTA--FDPVGAVPTVVPIAQVDGLPPAQRRGR 252
           G  G VN  +    VG     +G     G A  FDP+ AVP VVPI +VD     +RRGR
Sbjct: 130 GSGGAVNLEAPPASVG----VMGDSGLVGGAAPFDPIEAVPNVVPIGEVDAGTVVKRRGR 185

Query: 251 PRKVKSVEVGAE-------AIGSLVVSVGTADGLQNTVTKRRGRPPKVNNGPRPIVN--- 102
           P KV+++ V  E        +G+  + VG          +R GRPPKV+ G   +VN   
Sbjct: 186 PPKVQAMMVEGEPPVVVEPVVGATPIPVG----------RRPGRPPKVSYGMVGVVNGGS 235

Query: 101 ----RGKGQP 84
               RG+G+P
Sbjct: 236 ILGKRGRGRP 245


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