BLASTX nr result

ID: Acanthopanax24_contig00020731 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00020731
         (723 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017227602.1| PREDICTED: nuclear transcription factor Y su...    72   3e-11
ref|XP_017258244.1| PREDICTED: nuclear transcription factor Y su...    61   2e-10
gb|KZN09418.1| hypothetical protein DCAR_002074 [Daucus carota s...    61   2e-10

>ref|XP_017227602.1| PREDICTED: nuclear transcription factor Y subunit A-1-like [Daucus
           carota subsp. sativus]
 dbj|BAD15086.1| CCAAT-box binding factor HAP2 homolog [Daucus carota]
 gb|KZM80857.1| hypothetical protein DCAR_031537 [Daucus carota subsp. sativus]
          Length = 303

 Score = 72.4 bits (176), Expect = 3e-11
 Identities = 47/104 (45%), Positives = 55/104 (52%)
 Frame = +1

Query: 1   IRRARASGVRFAKKSDVDALKHPCPAEEKGTDXXXXXXXXXXXXXXXXXXXXXXNLKSHQ 180
           IRRARASG RFAKKSD DA ++P  +E KG +                      NL SHQ
Sbjct: 203 IRRARASGGRFAKKSDTDASENPQTSEVKGVNISSSVSAQSANSSGSQVFPSNCNLNSHQ 262

Query: 181 EARGLDTSKAQTSVNDGGRYRNQEALRASICDSNSAERREGATL 312
           EARG D     T VN+ G Y NQEA R S  D +S   REG ++
Sbjct: 263 EARGPDA----TYVNNSGGYENQEAFRVSTYDLHS--NREGGSV 300


>ref|XP_017258244.1| PREDICTED: nuclear transcription factor Y subunit A-1 [Daucus
           carota subsp. sativus]
 ref|XP_017258253.1| PREDICTED: nuclear transcription factor Y subunit A-1 [Daucus
           carota subsp. sativus]
          Length = 322

 Score = 60.8 bits (146), Expect(2) = 2e-10
 Identities = 38/84 (45%), Positives = 44/84 (52%)
 Frame = +1

Query: 1   IRRARASGVRFAKKSDVDALKHPCPAEEKGTDXXXXXXXXXXXXXXXXXXXXXXNLKSHQ 180
           IRRARASG RFAKKSDVD  K    A+  G +                      N+  +Q
Sbjct: 216 IRRARASGGRFAKKSDVDNSKQSNEAKGNGKNSAPAASAQSFSSSGSEPLPSDSNMNYYQ 275

Query: 181 EARGLDTSKAQTSVNDGGRYRNQE 252
           EARG   + AQT VNDGG YRNQ+
Sbjct: 276 EARG--QTNAQTYVNDGGMYRNQD 297



 Score = 33.5 bits (75), Expect(2) = 2e-10
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +3

Query: 309 SLGQQWGSIRSDQAPQWAAAM 371
           SL QQWG+IRSDQA Q A AM
Sbjct: 301 SLVQQWGNIRSDQAQQRATAM 321


>gb|KZN09418.1| hypothetical protein DCAR_002074 [Daucus carota subsp. sativus]
          Length = 298

 Score = 60.8 bits (146), Expect(2) = 2e-10
 Identities = 38/84 (45%), Positives = 44/84 (52%)
 Frame = +1

Query: 1   IRRARASGVRFAKKSDVDALKHPCPAEEKGTDXXXXXXXXXXXXXXXXXXXXXXNLKSHQ 180
           IRRARASG RFAKKSDVD  K    A+  G +                      N+  +Q
Sbjct: 192 IRRARASGGRFAKKSDVDNSKQSNEAKGNGKNSAPAASAQSFSSSGSEPLPSDSNMNYYQ 251

Query: 181 EARGLDTSKAQTSVNDGGRYRNQE 252
           EARG   + AQT VNDGG YRNQ+
Sbjct: 252 EARG--QTNAQTYVNDGGMYRNQD 273



 Score = 33.5 bits (75), Expect(2) = 2e-10
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +3

Query: 309 SLGQQWGSIRSDQAPQWAAAM 371
           SL QQWG+IRSDQA Q A AM
Sbjct: 277 SLVQQWGNIRSDQAQQRATAM 297


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