BLASTX nr result
ID: Acanthopanax24_contig00020576
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00020576
(401 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_022879557.1| polypyrimidine tract-binding protein homolog... 77 4e-14
ref|XP_022879556.1| polypyrimidine tract-binding protein homolog... 77 6e-14
dbj|GAV84009.1| RRM_1 domain-containing protein/RRM_5 domain-con... 74 8e-13
gb|PNT40851.1| hypothetical protein POPTR_004G123300v3 [Populus ... 68 4e-11
gb|PNT40850.1| hypothetical protein POPTR_004G123300v3 [Populus ... 68 8e-11
ref|XP_021633023.1| polypyrimidine tract-binding protein homolog... 68 1e-10
gb|PNT40852.1| hypothetical protein POPTR_004G123300v3 [Populus ... 68 1e-10
ref|XP_021633016.1| polypyrimidine tract-binding protein homolog... 68 2e-10
ref|XP_011002486.1| PREDICTED: polypyrimidine tract-binding prot... 68 2e-10
ref|XP_006384308.1| hypothetical protein POPTR_0004s12210g [Popu... 68 2e-10
gb|ABK95931.1| unknown [Populus trichocarpa] 68 2e-10
gb|POE95502.1| polypyrimidine tract-binding protein like 1 [Quer... 60 1e-07
gb|POE95501.1| polypyrimidine tract-binding protein like 1 [Quer... 60 1e-07
ref|XP_023924606.1| LOW QUALITY PROTEIN: polypyrimidine tract-bi... 60 1e-07
ref|XP_011035783.1| PREDICTED: polypyrimidine tract-binding prot... 59 2e-07
ref|XP_011035782.1| PREDICTED: polypyrimidine tract-binding prot... 59 2e-07
gb|PNS95910.1| hypothetical protein POPTR_017G085400v3 [Populus ... 57 9e-07
ref|XP_002324068.1| hypothetical protein POPTR_0017s12160g [Popu... 57 9e-07
ref|XP_010088136.1| polypyrimidine tract-binding protein homolog... 57 1e-06
ref|XP_015583261.1| PREDICTED: polypyrimidine tract-binding prot... 56 2e-06
>ref|XP_022879557.1| polypyrimidine tract-binding protein homolog 1 isoform X2 [Olea
europaea var. sylvestris]
Length = 349
Score = 77.4 bits (189), Expect = 4e-14
Identities = 41/78 (52%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Frame = +3
Query: 9 QAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSAHQ 179
Q GR ++ PSTF GQTYAS SVP Y++AA P G SP TN I P R Q HQ
Sbjct: 271 QTGRPTFMSGPSTFPGQTYASTSVPAYSSAAIPPGSSPLPQTNHITSGAPPMRVTQPMHQ 330
Query: 180 LNLAPGGSSPQIHPPYYS 233
N+ PGG SP PPYY+
Sbjct: 331 SNVLPGGISPPGQPPYYA 348
>ref|XP_022879556.1| polypyrimidine tract-binding protein homolog 1 isoform X1 [Olea
europaea var. sylvestris]
Length = 472
Score = 77.4 bits (189), Expect = 6e-14
Identities = 41/78 (52%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Frame = +3
Query: 9 QAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSAHQ 179
Q GR ++ PSTF GQTYAS SVP Y++AA P G SP TN I P R Q HQ
Sbjct: 394 QTGRPTFMSGPSTFPGQTYASTSVPAYSSAAIPPGSSPLPQTNHITSGAPPMRVTQPMHQ 453
Query: 180 LNLAPGGSSPQIHPPYYS 233
N+ PGG SP PPYY+
Sbjct: 454 SNVLPGGISPPGQPPYYA 471
>dbj|GAV84009.1| RRM_1 domain-containing protein/RRM_5 domain-containing protein
[Cephalotus follicularis]
Length = 475
Score = 74.3 bits (181), Expect = 8e-13
Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 TMQAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
TMQAGRS+Y PSTF GQTY + VP Y TAATP G SP H++ ++P Q
Sbjct: 395 TMQAGRSTYMQVPSTFPGQTYPASPVPAYGTAATPVGSSPLLHSSPVSPVVASVTMTQPG 454
Query: 174 HQLNLAPGGSSPQIHPPYY 230
N+ P G+SP PPYY
Sbjct: 455 FHTNVRPSGASPPNQPPYY 473
>gb|PNT40851.1| hypothetical protein POPTR_004G123300v3 [Populus trichocarpa]
Length = 222
Score = 67.8 bits (164), Expect = 4e-11
Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 TMQAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
TMQAG Y P T+ GQTY +P YATAA P G SP H++ I+ S +
Sbjct: 143 TMQAGGQGYASVPGTYPGQTYPTPPASAYATAAIPAGSSPRSHSSPISHSVASMAMSHPG 202
Query: 174 HQLNLAPGGSSPQIHPPYY 230
Q NL P G+SP PPYY
Sbjct: 203 MQSNLRPSGASPPGQPPYY 221
>gb|PNT40850.1| hypothetical protein POPTR_004G123300v3 [Populus trichocarpa]
Length = 276
Score = 67.8 bits (164), Expect = 8e-11
Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 TMQAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
TMQAG Y P T+ GQTY +P YATAA P G SP H++ I+ S +
Sbjct: 197 TMQAGGQGYASVPGTYPGQTYPTPPASAYATAAIPAGSSPRSHSSPISHSVASMAMSHPG 256
Query: 174 HQLNLAPGGSSPQIHPPYY 230
Q NL P G+SP PPYY
Sbjct: 257 MQSNLRPSGASPPGQPPYY 275
>ref|XP_021633023.1| polypyrimidine tract-binding protein homolog 1 isoform X2 [Manihot
esculenta]
Length = 399
Score = 67.8 bits (164), Expect = 1e-10
Identities = 37/78 (47%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +3
Query: 6 MQAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSAH 176
+QAG Y P TF GQTY++P VPTY TAA P G SP ++ I+P Q+
Sbjct: 320 VQAGGPVYASAPGTFPGQTYSAPPVPTYVTAAMPVGSSPLSQSSTISPGVASMPMTQTGI 379
Query: 177 QLNLAPGGSSPQIHPPYY 230
Q NL PGG+ P PPYY
Sbjct: 380 QPNLRPGGAPPVGQPPYY 397
>gb|PNT40852.1| hypothetical protein POPTR_004G123300v3 [Populus trichocarpa]
Length = 423
Score = 67.8 bits (164), Expect = 1e-10
Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 TMQAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
TMQAG Y P T+ GQTY +P YATAA P G SP H++ I+ S +
Sbjct: 344 TMQAGGQGYASVPGTYPGQTYPTPPASAYATAAIPAGSSPRSHSSPISHSVASMAMSHPG 403
Query: 174 HQLNLAPGGSSPQIHPPYY 230
Q NL P G+SP PPYY
Sbjct: 404 MQSNLRPSGASPPGQPPYY 422
>ref|XP_021633016.1| polypyrimidine tract-binding protein homolog 1 isoform X1 [Manihot
esculenta]
gb|OAY60187.1| hypothetical protein MANES_01G092700 [Manihot esculenta]
Length = 468
Score = 67.8 bits (164), Expect = 2e-10
Identities = 37/78 (47%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +3
Query: 6 MQAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSAH 176
+QAG Y P TF GQTY++P VPTY TAA P G SP ++ I+P Q+
Sbjct: 389 VQAGGPVYASAPGTFPGQTYSAPPVPTYVTAAMPVGSSPLSQSSTISPGVASMPMTQTGI 448
Query: 177 QLNLAPGGSSPQIHPPYY 230
Q NL PGG+ P PPYY
Sbjct: 449 QPNLRPGGAPPVGQPPYY 466
>ref|XP_011002486.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Populus euphratica]
Length = 473
Score = 67.8 bits (164), Expect = 2e-10
Identities = 37/79 (46%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 TMQAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
TMQAG Y P T+ GQTY +P V YATAA P G SP H++ I+ S +
Sbjct: 394 TMQAGGQGYASVPGTYPGQTYPTPPVSAYATAAVPAGSSPLSHSSPISHSVASMGMSHLG 453
Query: 174 HQLNLAPGGSSPQIHPPYY 230
Q NL P G+SP PPYY
Sbjct: 454 MQSNLRPSGASPPGQPPYY 472
>ref|XP_006384308.1| hypothetical protein POPTR_0004s12210g [Populus trichocarpa]
gb|PNT40849.1| hypothetical protein POPTR_004G123300v3 [Populus trichocarpa]
Length = 473
Score = 67.8 bits (164), Expect = 2e-10
Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 TMQAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
TMQAG Y P T+ GQTY +P YATAA P G SP H++ I+ S +
Sbjct: 394 TMQAGGQGYASVPGTYPGQTYPTPPASAYATAAIPAGSSPRSHSSPISHSVASMAMSHPG 453
Query: 174 HQLNLAPGGSSPQIHPPYY 230
Q NL P G+SP PPYY
Sbjct: 454 MQSNLRPSGASPPGQPPYY 472
>gb|ABK95931.1| unknown [Populus trichocarpa]
Length = 473
Score = 67.8 bits (164), Expect = 2e-10
Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 TMQAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
TMQAG Y P T+ GQTY +P YATAA P G SP H++ I+ S +
Sbjct: 394 TMQAGGQGYASVPGTYPGQTYPTPPASAYATAAIPAGSSPRSHSSPISHSVASMAMSHPG 453
Query: 174 HQLNLAPGGSSPQIHPPYY 230
Q NL P G+SP PPYY
Sbjct: 454 MQSNLRPSGASPPGQPPYY 472
>gb|POE95502.1| polypyrimidine tract-binding protein like 1 [Quercus suber]
Length = 461
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +3
Query: 3 TMQAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
+MQAGR + PST+ GQ+YA+ SV +YA+A P SPH T+QI PS + G
Sbjct: 363 SMQAGRPPFVSAPSTYPGQSYAASSVSSYASAPMPSSSSPHTPTSQI-PSPGASMGLSPG 421
Query: 174 HQLNLAPGGSSPQIH 218
Q NL PGG S H
Sbjct: 422 VQANLRPGGVSSPSH 436
>gb|POE95501.1| polypyrimidine tract-binding protein like 1 [Quercus suber]
Length = 474
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +3
Query: 3 TMQAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
+MQAGR + PST+ GQ+YA+ SV +YA+A P SPH T+QI PS + G
Sbjct: 376 SMQAGRPPFVSAPSTYPGQSYAASSVSSYASAPMPSSSSPHTPTSQI-PSPGASMGLSPG 434
Query: 174 HQLNLAPGGSSPQIH 218
Q NL PGG S H
Sbjct: 435 VQANLRPGGVSSPSH 449
>ref|XP_023924606.1| LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog
1-like [Quercus suber]
Length = 495
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +3
Query: 3 TMQAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
+MQAGR + PST+ GQ+YA+ SV +YA+A P SPH T+QI PS + G
Sbjct: 397 SMQAGRPPFVSAPSTYPGQSYAASSVSSYASAPMPSSSSPHTPTSQI-PSPGASMGLSPG 455
Query: 174 HQLNLAPGGSSPQIH 218
Q NL PGG S H
Sbjct: 456 VQANLRPGGVSSPSH 470
>ref|XP_011035783.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform X2 [Populus euphratica]
Length = 403
Score = 58.9 bits (141), Expect = 2e-07
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 TMQAGRSSYPST---FLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
TMQAG Y S + GQTY +P P YA++A P G SPH +++ I+P
Sbjct: 325 TMQAGGPGYASVRGMYPGQTYPTP--PAYASSAIPPGSSPHSYSSPISPGVASMGMTHPG 382
Query: 174 HQLNLAPGGSSPQIHPPYY 230
Q N+ PGG+SP PYY
Sbjct: 383 VQPNMRPGGASPSGQTPYY 401
>ref|XP_011035782.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform X1 [Populus euphratica]
Length = 472
Score = 58.9 bits (141), Expect = 2e-07
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 TMQAGRSSYPST---FLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
TMQAG Y S + GQTY +P P YA++A P G SPH +++ I+P
Sbjct: 394 TMQAGGPGYASVRGMYPGQTYPTP--PAYASSAIPPGSSPHSYSSPISPGVASMGMTHPG 451
Query: 174 HQLNLAPGGSSPQIHPPYY 230
Q N+ PGG+SP PYY
Sbjct: 452 VQPNMRPGGASPSGQTPYY 470
>gb|PNS95910.1| hypothetical protein POPTR_017G085400v3 [Populus trichocarpa]
Length = 472
Score = 57.0 bits (136), Expect = 9e-07
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 TMQAGRSSYPST---FLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
+MQAG Y S + GQTY +P P YA++A P G SPH +++ I+P
Sbjct: 394 SMQAGGPGYSSVRGMYPGQTYPTP--PAYASSALPPGSSPHSYSSPISPGVASMGMTHPG 451
Query: 174 HQLNLAPGGSSPQIHPPYY 230
Q N+ PGG+SP PYY
Sbjct: 452 VQPNMRPGGASPPGQTPYY 470
>ref|XP_002324068.1| hypothetical protein POPTR_0017s12160g [Populus trichocarpa]
gb|PNS95911.1| hypothetical protein POPTR_017G085400v3 [Populus trichocarpa]
Length = 476
Score = 57.0 bits (136), Expect = 9e-07
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 TMQAGRSSYPST---FLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
+MQAG Y S + GQTY +P P YA++A P G SPH +++ I+P
Sbjct: 398 SMQAGGPGYSSVRGMYPGQTYPTP--PAYASSALPPGSSPHSYSSPISPGVASMGMTHPG 455
Query: 174 HQLNLAPGGSSPQIHPPYY 230
Q N+ PGG+SP PYY
Sbjct: 456 VQPNMRPGGASPPGQTPYY 474
>ref|XP_010088136.1| polypyrimidine tract-binding protein homolog 1 isoform X1 [Morus
notabilis]
gb|EXB31948.1| Polypyrimidine tract-binding protein-1-like protein [Morus
notabilis]
Length = 484
Score = 56.6 bits (135), Expect = 1e-06
Identities = 39/89 (43%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Frame = +3
Query: 3 TMQAGRSSY---PSTFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQSA 173
TMQAGRS+Y PSTF GQ Y + SVP YA A P SP T I S A Q
Sbjct: 395 TMQAGRSTYVSSPSTFRGQNYGASSVPAYAAATMPSVSSPLAQTGPI-ASGVAATIMQPG 453
Query: 174 HQLNLAPGGS----------SPQIHPPYY 230
N PGG+ SP PPYY
Sbjct: 454 ATTNARPGGASPPGVRRGGVSPPGQPPYY 482
>ref|XP_015583261.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 [Ricinus
communis]
Length = 476
Score = 56.2 bits (134), Expect = 2e-06
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Frame = +3
Query: 3 TMQAGRSSYPS----TFLGQTYASPSVPTYATAATPGGFSPHGHTNQINPSDPLARGAQS 170
+M+AG +YPS TF GQ+Y +P PTY +AA P G SP + ++P
Sbjct: 396 SMEAGGPAYPSVPPGTFPGQSYPAPP-PTYVSAAMPVGSSPLTQGSPMSPGVGTMPMTHP 454
Query: 171 AHQLNLAPGGSSPQIHPPYY 230
Q NL PGG+SP PP+Y
Sbjct: 455 GVQSNLRPGGASPPGQPPFY 474