BLASTX nr result

ID: Acanthopanax24_contig00020262 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00020262
         (401 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017250957.1| PREDICTED: low-temperature-induced 65 kDa pr...    60   6e-08

>ref|XP_017250957.1| PREDICTED: low-temperature-induced 65 kDa protein-like [Daucus
           carota subsp. sativus]
 gb|KZM94957.1| hypothetical protein DCAR_018199 [Daucus carota subsp. sativus]
          Length = 659

 Score = 60.5 bits (145), Expect = 6e-08
 Identities = 54/151 (35%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
 Frame = +1

Query: 1   PETRRAPIHESDAVRSA-------APGPIGQPGANLERPSVMAEDRNDSKTADPPVRPFN 159
           PE   API+ES AVRSA       A GP G  G NL+RPS M   R DS   DP  RPF 
Sbjct: 87  PEIHGAPIYESAAVRSATLSSGQPAAGPAG--GTNLDRPS-MVGPRYDSPFVDPETRPFV 143

Query: 160 RLQ-EEEDGQ-----------PKGNLSGLTAKDVVHNLPEDKHASFSTGNYASGNHSPTG 303
           + Q +EE G+           P   +   T +DV H LP              G ++ TG
Sbjct: 144 QWQADEEHGKHLLEEHKHAPLPCKLVDTRTGEDVYHELPH------------KGINTRTG 191

Query: 304 ENLHGQEESPGQERNKIGFPTAIEGIGGSKG 396
            ++  + E+P Q    +G    +EGI G  G
Sbjct: 192 RDVREERENPDQ----VGGRNVMEGIRGGIG 218


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