BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00020064
         (851 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017218344.1| PREDICTED: protein RNA-directed DNA methylat...   137   2e-32
gb|KZM86945.1| hypothetical protein DCAR_024079 [Daucus carota s...   137   2e-32
ref|XP_017218343.1| PREDICTED: protein RNA-directed DNA methylat...   137   2e-32
ref|XP_019079861.1| PREDICTED: protein RNA-directed DNA methylat...    99   3e-19
ref|XP_010658348.1| PREDICTED: protein RNA-directed DNA methylat...    99   3e-19
ref|XP_015583775.1| PREDICTED: protein RNA-directed DNA methylat...    96   2e-18
ref|XP_023879680.1| protein RNA-directed DNA methylation 3 isofo...    94   1e-17
ref|XP_023879679.1| protein RNA-directed DNA methylation 3 isofo...    94   1e-17
ref|XP_023879678.1| protein RNA-directed DNA methylation 3 isofo...    94   1e-17
ref|XP_017648917.1| PREDICTED: protein RNA-directed DNA methylat...    93   2e-17
ref|XP_017648916.1| PREDICTED: protein RNA-directed DNA methylat...    93   2e-17
gb|KHG26887.1| hypothetical protein F383_05296 [Gossypium arboreum]    93   2e-17
gb|KHG26886.1| hypothetical protein F383_05296 [Gossypium arboreum]    93   2e-17
ref|XP_016728063.1| PREDICTED: protein RNA-directed DNA methylat...    93   2e-17
ref|XP_016728062.1| PREDICTED: protein RNA-directed DNA methylat...    93   2e-17
gb|PPS08661.1| hypothetical protein GOBAR_AA11993 [Gossypium bar...    93   2e-17
gb|PNX87207.1| transcription elongation factor SPT6, partial [Tr...    91   5e-17
ref|XP_021295530.1| LOW QUALITY PROTEIN: protein RNA-directed DN...    91   1e-16
gb|EOY18833.1| Kow domain-containing transcription factor 1, put...    91   1e-16
ref|XP_017984655.1| PREDICTED: protein RNA-directed DNA methylat...    89   4e-16

>ref|XP_017218344.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X2
            [Daucus carota subsp. sativus]
          Length = 1582

 Score =  137 bits (344), Expect = 2e-32
 Identities = 78/194 (40%), Positives = 101/194 (52%), Gaps = 14/194 (7%)
 Frame = +1

Query: 181  NPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDKALGKTEEVGGWGKSVGGWNRX 360
            +PL S D   KKD E + W T++ P  +SSWGA  T + AL  TE+VGGWG S GGW++ 
Sbjct: 694  DPLNSMDIDSKKD-EGATWETKLAPTQSSSWGAPATRETALATTEQVGGWGGSDGGWSKA 752

Query: 361  XXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPTDTSKDAAPSWGKNT 540
                         WGRA + GD Q G   DA   WG AK KS S  D S   A SWGK T
Sbjct: 753  ASDTVGGSNTSDSWGRAKLPGDDQAGQSTDA---WGAAKDKSTSTCDPS---ASSWGKRT 806

Query: 541  EP--------------WDKESNVTENPTRSWSSPNVQNQIESLGNVADKWTNKESSSGSK 678
            +P              W KE+N ++N T +W S NV+NQ++S G   D    ++  S  +
Sbjct: 807  DPTNNQDAGWGKSEGTWGKENNASDNTTSAWGSANVKNQVDSWGKGKD---GEDGPSEGR 863

Query: 679  AVWNTSQATTEKET 720
            + WNTS    +K T
Sbjct: 864  SSWNTSTTVADKGT 877



 Score =  113 bits (282), Expect = 3e-24
 Identities = 76/239 (31%), Positives = 104/239 (43%)
 Frame = +1

Query: 1    ETGHMARECSQGGGTGGNACFKCGETGHMARECSQXXXXXXXXXXXXXXXXXXXXXXXXA 180
            ETGHMAREC+QGG  GGNACFKCGETGHMARECSQ                         
Sbjct: 1018 ETGHMARECTQGGNKGGNACFKCGETGHMARECSQ------------------GGGSGAG 1059

Query: 181  NPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDKALGKTEEVGGWGKSVGGWNRX 360
            N ++S+ +   KDV ++AW+T+   N NS+WGA++  D         G WG S       
Sbjct: 1060 NNVRSSWSHSNKDVGETAWSTKSDTNQNSTWGANLADD-------ATGSWGAS------- 1105

Query: 361  XXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPTDTSKDAAPSWGKNT 540
                                      +P+     W    V++ S TD        WG + 
Sbjct: 1106 --------------------------APEKESRGWSSKAVQTTS-TDAPVSETGGWGSS- 1137

Query: 541  EPWDKESNVTENPTRSWSSPNVQNQIESLGNVADKWTNKESSSGSKAVWNTSQATTEKE 717
              W+K S+ +++   SW + + + + E  G     W+       SKA WN S  T +KE
Sbjct: 1138 --WNKTSDTSKDGGSSWGTASSEKEKERGG-----WS-------SKASWNMSTPTPDKE 1182



 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 74/233 (31%), Positives = 99/233 (42%), Gaps = 1/233 (0%)
 Frame = +1

Query: 1    ETGHMARECSQGGGTGGNACFKCGETGHMARECSQXXXXXXXXXXXXXXXXXXXXXXXXA 180
            ETGHM+RECS+ GG+G N CFKCGE+GH AR+C+Q                        +
Sbjct: 1304 ETGHMSRECSKAGGSGNN-CFKCGESGHQARDCTQ---------GGGGGYSTSSWSAKNS 1353

Query: 181  NPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDKALGKTEEVGGWGKSVGGWNRX 360
              L+++   F+K    +AW +  VP   SSWGA    D AL  +E VGGWG +  G N+ 
Sbjct: 1354 TQLETSRLNFEKG--SAAWGSAAVP--KSSWGAAKADDGALA-SENVGGWGNTDSGRNQS 1408

Query: 361  XXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPTDTSKDAAPSWGKNT 540
                                      +      +WG +K         S+     WG   
Sbjct: 1409 TPAI----------------------NDSTVSDSWGDSK---------SEKVTGGWGSAA 1437

Query: 541  EPWDKESNVTENPTRSWSS-PNVQNQIESLGNVADKWTNKESSSGSKAVWNTS 696
            EP          PT +WS+    +NQ  S G  AD   +KE S  S + WNTS
Sbjct: 1438 EP--------GKPTSNWSTGTEGKNQSVSWGGTADNGNSKEISDRSMSAWNTS 1482



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 67/255 (26%), Positives = 94/255 (36%), Gaps = 16/255 (6%)
 Frame = +1

Query: 1    ETGHMARECSQGGGTGGNACFKCGETGHMARECSQXXXXXXXXXXXXXXXXXXXXXXXXA 180
            E+GHMARECSQGGG GGNAC+KCGE+GH+ARECSQ                         
Sbjct: 918  ESGHMARECSQGGG-GGNACYKCGESGHIARECSQGGGGGSNACYKCGETGHMARECTQG 976

Query: 181  NPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDKALGKTEEVGGWGKSVGGWNRX 360
                   N   K  E    A E         G       A  K  E G   +        
Sbjct: 977  GG-SGGGNACYKCGETGHMARECT---QGGGGGGSRGGNACYKCGETGHMARECTQGGNK 1032

Query: 361  XXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKA-----KVKSDSPTDTSKDAAPS 525
                           R    G G  G+  +  ++W  +     +    + +DT++++  +
Sbjct: 1033 GGNACFKCGETGHMARECSQGGGS-GAGNNVRSSWSHSNKDVGETAWSTKSDTNQNS--T 1089

Query: 526  WGKN-----TEPWDKESNVTENPTRSWSSPNVQN-----QIESLGNVADKWT-NKESSSG 672
            WG N     T  W   ++  E  +R WSS  VQ       +   G     W    ++S  
Sbjct: 1090 WGANLADDATGSWG--ASAPEKESRGWSSKAVQTTSTDAPVSETGGWGSSWNKTSDTSKD 1147

Query: 673  SKAVWNTSQATTEKE 717
              + W T+ +  EKE
Sbjct: 1148 GGSSWGTASSEKEKE 1162


>gb|KZM86945.1| hypothetical protein DCAR_024079 [Daucus carota subsp. sativus]
          Length = 1582

 Score =  137 bits (344), Expect = 2e-32
 Identities = 78/194 (40%), Positives = 101/194 (52%), Gaps = 14/194 (7%)
 Frame = +1

Query: 181  NPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDKALGKTEEVGGWGKSVGGWNRX 360
            +PL S D   KKD E + W T++ P  +SSWGA  T + AL  TE+VGGWG S GGW++ 
Sbjct: 694  DPLNSMDIDSKKD-EGATWETKLAPTQSSSWGAPATRETALATTEQVGGWGGSDGGWSKA 752

Query: 361  XXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPTDTSKDAAPSWGKNT 540
                         WGRA + GD Q G   DA   WG AK KS S  D S   A SWGK T
Sbjct: 753  ASDTVGGSNTSDSWGRAKLPGDDQAGQSTDA---WGAAKDKSTSTCDPS---ASSWGKRT 806

Query: 541  EP--------------WDKESNVTENPTRSWSSPNVQNQIESLGNVADKWTNKESSSGSK 678
            +P              W KE+N ++N T +W S NV+NQ++S G   D    ++  S  +
Sbjct: 807  DPTNNQDAGWGKSEGTWGKENNASDNTTSAWGSANVKNQVDSWGKGKD---GEDGPSEGR 863

Query: 679  AVWNTSQATTEKET 720
            + WNTS    +K T
Sbjct: 864  SSWNTSTTVADKGT 877



 Score =  107 bits (266), Expect = 3e-22
 Identities = 76/233 (32%), Positives = 101/233 (43%), Gaps = 1/233 (0%)
 Frame = +1

Query: 1    ETGHMARECSQGGGTGGNACFKCGETGHMARECSQXXXXXXXXXXXXXXXXXXXXXXXXA 180
            ETGHM+RECS+ GG+G N CFKCGE+GH AR+C+Q                        +
Sbjct: 1302 ETGHMSRECSKAGGSGNN-CFKCGESGHQARDCTQ---------GGGGGYSTSSWSAKNS 1351

Query: 181  NPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDKALGKTEEVGGWGKSVGGWNRX 360
              L+++   F+KDV  +AW +  VP   SSWGA    D AL  +E VGGWG +  G N+ 
Sbjct: 1352 TQLETSRLNFEKDVGSAAWGSAAVP--KSSWGAAKADDGALA-SENVGGWGNTDSGRNQS 1408

Query: 361  XXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPTDTSKDAAPSWGKNT 540
                                      +      +WG +K         S+     WG   
Sbjct: 1409 TPAI----------------------NDSTVSDSWGDSK---------SEKVTGGWGSAA 1437

Query: 541  EPWDKESNVTENPTRSWSS-PNVQNQIESLGNVADKWTNKESSSGSKAVWNTS 696
            EP          PT +WS+    +NQ  S G  AD   +KE S  S + WNTS
Sbjct: 1438 EP--------GKPTSNWSTGTEGKNQSVSWGGTADNGNSKEISDRSMSAWNTS 1482



 Score =  104 bits (260), Expect = 2e-21
 Identities = 74/239 (30%), Positives = 102/239 (42%)
 Frame = +1

Query: 1    ETGHMARECSQGGGTGGNACFKCGETGHMARECSQXXXXXXXXXXXXXXXXXXXXXXXXA 180
            ETGHMAREC+QGG  GGNACFKCGETGHMARECSQ                         
Sbjct: 1018 ETGHMARECTQGGNKGGNACFKCGETGHMARECSQ------------------GGGSGAG 1059

Query: 181  NPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDKALGKTEEVGGWGKSVGGWNRX 360
            N ++S+ +   K   ++AW+T+   N NS+WGA++  D         G WG S       
Sbjct: 1060 NNVRSSWSHSNKG--ETAWSTKSDTNQNSTWGANLADD-------ATGSWGAS------- 1103

Query: 361  XXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPTDTSKDAAPSWGKNT 540
                                      +P+     W    V++ S TD        WG + 
Sbjct: 1104 --------------------------APEKESRGWSSKAVQTTS-TDAPVSETGGWGSS- 1135

Query: 541  EPWDKESNVTENPTRSWSSPNVQNQIESLGNVADKWTNKESSSGSKAVWNTSQATTEKE 717
              W+K S+ +++   SW + + + + E  G     W+       SKA WN S  T +KE
Sbjct: 1136 --WNKTSDTSKDGGSSWGTASSEKEKERGG-----WS-------SKASWNMSTPTPDKE 1180



 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 68/253 (26%), Positives = 94/253 (37%), Gaps = 14/253 (5%)
 Frame = +1

Query: 1    ETGHMARECSQGGGTGGNACFKCGETGHMARECSQXXXXXXXXXXXXXXXXXXXXXXXXA 180
            E+GHMARECSQGGG GGNAC+KCGE+GH+ARECSQ                         
Sbjct: 918  ESGHMARECSQGGG-GGNACYKCGESGHIARECSQGGGGGSNACYKCGETGHMARECTQG 976

Query: 181  NPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDKALGKTEEVGGWGKSVGGWNRX 360
                   N   K  E    A E         G       A  K  E G   +        
Sbjct: 977  GG-SGGGNACYKCGETGHMARECT---QGGGGGGSRGGNACYKCGETGHMARECTQGGNK 1032

Query: 361  XXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANW---GKAKVKSDSPTDTSKDAAPSWG 531
                           R    G G  G+  +  ++W    K +    + +DT++++  +WG
Sbjct: 1033 GGNACFKCGETGHMARECSQGGGS-GAGNNVRSSWSHSNKGETAWSTKSDTNQNS--TWG 1089

Query: 532  KN-----TEPWDKESNVTENPTRSWSSPNVQN-----QIESLGNVADKWT-NKESSSGSK 678
             N     T  W   ++  E  +R WSS  VQ       +   G     W    ++S    
Sbjct: 1090 ANLADDATGSWG--ASAPEKESRGWSSKAVQTTSTDAPVSETGGWGSSWNKTSDTSKDGG 1147

Query: 679  AVWNTSQATTEKE 717
            + W T+ +  EKE
Sbjct: 1148 SSWGTASSEKEKE 1160


>ref|XP_017218343.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X1
            [Daucus carota subsp. sativus]
          Length = 1584

 Score =  137 bits (344), Expect = 2e-32
 Identities = 78/194 (40%), Positives = 101/194 (52%), Gaps = 14/194 (7%)
 Frame = +1

Query: 181  NPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDKALGKTEEVGGWGKSVGGWNRX 360
            +PL S D   KKD E + W T++ P  +SSWGA  T + AL  TE+VGGWG S GGW++ 
Sbjct: 694  DPLNSMDIDSKKD-EGATWETKLAPTQSSSWGAPATRETALATTEQVGGWGGSDGGWSKA 752

Query: 361  XXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPTDTSKDAAPSWGKNT 540
                         WGRA + GD Q G   DA   WG AK KS S  D S   A SWGK T
Sbjct: 753  ASDTVGGSNTSDSWGRAKLPGDDQAGQSTDA---WGAAKDKSTSTCDPS---ASSWGKRT 806

Query: 541  EP--------------WDKESNVTENPTRSWSSPNVQNQIESLGNVADKWTNKESSSGSK 678
            +P              W KE+N ++N T +W S NV+NQ++S G   D    ++  S  +
Sbjct: 807  DPTNNQDAGWGKSEGTWGKENNASDNTTSAWGSANVKNQVDSWGKGKD---GEDGPSEGR 863

Query: 679  AVWNTSQATTEKET 720
            + WNTS    +K T
Sbjct: 864  SSWNTSTTVADKGT 877



 Score =  113 bits (282), Expect = 3e-24
 Identities = 76/239 (31%), Positives = 104/239 (43%)
 Frame = +1

Query: 1    ETGHMARECSQGGGTGGNACFKCGETGHMARECSQXXXXXXXXXXXXXXXXXXXXXXXXA 180
            ETGHMAREC+QGG  GGNACFKCGETGHMARECSQ                         
Sbjct: 1018 ETGHMARECTQGGNKGGNACFKCGETGHMARECSQ------------------GGGSGAG 1059

Query: 181  NPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDKALGKTEEVGGWGKSVGGWNRX 360
            N ++S+ +   KDV ++AW+T+   N NS+WGA++  D         G WG S       
Sbjct: 1060 NNVRSSWSHSNKDVGETAWSTKSDTNQNSTWGANLADD-------ATGSWGAS------- 1105

Query: 361  XXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPTDTSKDAAPSWGKNT 540
                                      +P+     W    V++ S TD        WG + 
Sbjct: 1106 --------------------------APEKESRGWSSKAVQTTS-TDAPVSETGGWGSS- 1137

Query: 541  EPWDKESNVTENPTRSWSSPNVQNQIESLGNVADKWTNKESSSGSKAVWNTSQATTEKE 717
              W+K S+ +++   SW + + + + E  G     W+       SKA WN S  T +KE
Sbjct: 1138 --WNKTSDTSKDGGSSWGTASSEKEKERGG-----WS-------SKASWNMSTPTPDKE 1182



 Score =  107 bits (266), Expect = 3e-22
 Identities = 76/233 (32%), Positives = 101/233 (43%), Gaps = 1/233 (0%)
 Frame = +1

Query: 1    ETGHMARECSQGGGTGGNACFKCGETGHMARECSQXXXXXXXXXXXXXXXXXXXXXXXXA 180
            ETGHM+RECS+ GG+G N CFKCGE+GH AR+C+Q                        +
Sbjct: 1304 ETGHMSRECSKAGGSGNN-CFKCGESGHQARDCTQ---------GGGGGYSTSSWSAKNS 1353

Query: 181  NPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDKALGKTEEVGGWGKSVGGWNRX 360
              L+++   F+KDV  +AW +  VP   SSWGA    D AL  +E VGGWG +  G N+ 
Sbjct: 1354 TQLETSRLNFEKDVGSAAWGSAAVP--KSSWGAAKADDGALA-SENVGGWGNTDSGRNQS 1410

Query: 361  XXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPTDTSKDAAPSWGKNT 540
                                      +      +WG +K         S+     WG   
Sbjct: 1411 TPAI----------------------NDSTVSDSWGDSK---------SEKVTGGWGSAA 1439

Query: 541  EPWDKESNVTENPTRSWSS-PNVQNQIESLGNVADKWTNKESSSGSKAVWNTS 696
            EP          PT +WS+    +NQ  S G  AD   +KE S  S + WNTS
Sbjct: 1440 EP--------GKPTSNWSTGTEGKNQSVSWGGTADNGNSKEISDRSMSAWNTS 1484



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 67/255 (26%), Positives = 94/255 (36%), Gaps = 16/255 (6%)
 Frame = +1

Query: 1    ETGHMARECSQGGGTGGNACFKCGETGHMARECSQXXXXXXXXXXXXXXXXXXXXXXXXA 180
            E+GHMARECSQGGG GGNAC+KCGE+GH+ARECSQ                         
Sbjct: 918  ESGHMARECSQGGG-GGNACYKCGESGHIARECSQGGGGGSNACYKCGETGHMARECTQG 976

Query: 181  NPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDKALGKTEEVGGWGKSVGGWNRX 360
                   N   K  E    A E         G       A  K  E G   +        
Sbjct: 977  GG-SGGGNACYKCGETGHMARECT---QGGGGGGSRGGNACYKCGETGHMARECTQGGNK 1032

Query: 361  XXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKA-----KVKSDSPTDTSKDAAPS 525
                           R    G G  G+  +  ++W  +     +    + +DT++++  +
Sbjct: 1033 GGNACFKCGETGHMARECSQGGGS-GAGNNVRSSWSHSNKDVGETAWSTKSDTNQNS--T 1089

Query: 526  WGKN-----TEPWDKESNVTENPTRSWSSPNVQN-----QIESLGNVADKWT-NKESSSG 672
            WG N     T  W   ++  E  +R WSS  VQ       +   G     W    ++S  
Sbjct: 1090 WGANLADDATGSWG--ASAPEKESRGWSSKAVQTTSTDAPVSETGGWGSSWNKTSDTSKD 1147

Query: 673  SKAVWNTSQATTEKE 717
              + W T+ +  EKE
Sbjct: 1148 GGSSWGTASSEKEKE 1162


>ref|XP_019079861.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X4 [Vitis
            vinifera]
          Length = 1710

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 66/190 (34%), Positives = 86/190 (45%), Gaps = 13/190 (6%)
 Frame = +1

Query: 178  ANPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDKALGKTEEVGGWGKSVGGWNR 357
            ANP  S DN  KKD+ D++W  +  PN  SSWGA  TS K +  +++VGGWGKS   WN+
Sbjct: 693  ANPFGSVDNDSKKDMGDASWEIKSTPNQKSSWGAATTS-KTVADSDQVGGWGKSENSWNK 751

Query: 358  XXXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPTDTSKDAAPSWGKN 537
                          W +A ++   Q GS K AG NWG  K  +DS      D   SWGK 
Sbjct: 752  -SATTALGSSVADGWEKAKLSNVDQAGSSKGAGNNWGD-KTVADS------DQGGSWGKG 803

Query: 538  TEPWDKE---SNVTENPTRSWSSPNVQN--QIESLGNVADKWTNKESSSG--------SK 678
                DK    +N   + T +W    + +  Q  S       W NK  + G        S+
Sbjct: 804  ENCLDKSAATTNFGSSATDNWGKAKLSSSGQAGSSKGAGGNWDNKIVADGDQVGGWGKSE 863

Query: 679  AVWNTSQATT 708
              WN S  TT
Sbjct: 864  NCWNRSAVTT 873



 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 57/202 (28%), Positives = 80/202 (39%), Gaps = 26/202 (12%)
 Frame = +1

Query: 193  STDNVFKKDVEDSAWATEVVPNHNSSWGADMTSD-KALGKTEEVGGWGKSVGGWNRXXXX 369
            +TDN  K  +  S  A        SS GA    D K +   ++VGGWGKS   WNR    
Sbjct: 820  ATDNWGKAKLSSSGQA-------GSSKGAGGNWDNKIVADGDQVGGWGKSENCWNRSAVT 872

Query: 370  XXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPTD------TSKDAAPSWG 531
                      W ++ V+   Q GS KDAG NWGK K  + +P++      T  D   +WG
Sbjct: 873  TGFGSSASDSWEKSKVSDSNQAGSLKDAGDNWGKGKNVAGTPSNGWNDATTGNDQLDAWG 932

Query: 532  K-----NTEPWDKESNVT------ENPTRSWSSPNVQNQIE--------SLGNVADKWTN 654
            K         W+K  + +       N    W+     ++ E        + G   +    
Sbjct: 933  KGKNVGEASCWEKSKSPSIGEDRWNNGGPGWNQQKSGDKREDTGGGDGSTWGKALESQEK 992

Query: 655  KESSSGSKAVWNTSQATTEKET 720
               SS SK  W +S A  E +T
Sbjct: 993  GSGSSASKVDWKSSAARPENQT 1014


>ref|XP_010658348.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X3 [Vitis
            vinifera]
          Length = 1712

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 66/190 (34%), Positives = 86/190 (45%), Gaps = 13/190 (6%)
 Frame = +1

Query: 178  ANPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDKALGKTEEVGGWGKSVGGWNR 357
            ANP  S DN  KKD+ D++W  +  PN  SSWGA  TS K +  +++VGGWGKS   WN+
Sbjct: 695  ANPFGSVDNDSKKDMGDASWEIKSTPNQKSSWGAATTS-KTVADSDQVGGWGKSENSWNK 753

Query: 358  XXXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPTDTSKDAAPSWGKN 537
                          W +A ++   Q GS K AG NWG  K  +DS      D   SWGK 
Sbjct: 754  -SATTALGSSVADGWEKAKLSNVDQAGSSKGAGNNWGD-KTVADS------DQGGSWGKG 805

Query: 538  TEPWDKE---SNVTENPTRSWSSPNVQN--QIESLGNVADKWTNKESSSG--------SK 678
                DK    +N   + T +W    + +  Q  S       W NK  + G        S+
Sbjct: 806  ENCLDKSAATTNFGSSATDNWGKAKLSSSGQAGSSKGAGGNWDNKIVADGDQVGGWGKSE 865

Query: 679  AVWNTSQATT 708
              WN S  TT
Sbjct: 866  NCWNRSAVTT 875



 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 57/202 (28%), Positives = 80/202 (39%), Gaps = 26/202 (12%)
 Frame = +1

Query: 193  STDNVFKKDVEDSAWATEVVPNHNSSWGADMTSD-KALGKTEEVGGWGKSVGGWNRXXXX 369
            +TDN  K  +  S  A        SS GA    D K +   ++VGGWGKS   WNR    
Sbjct: 822  ATDNWGKAKLSSSGQA-------GSSKGAGGNWDNKIVADGDQVGGWGKSENCWNRSAVT 874

Query: 370  XXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPTD------TSKDAAPSWG 531
                      W ++ V+   Q GS KDAG NWGK K  + +P++      T  D   +WG
Sbjct: 875  TGFGSSASDSWEKSKVSDSNQAGSLKDAGDNWGKGKNVAGTPSNGWNDATTGNDQLDAWG 934

Query: 532  K-----NTEPWDKESNVT------ENPTRSWSSPNVQNQIE--------SLGNVADKWTN 654
            K         W+K  + +       N    W+     ++ E        + G   +    
Sbjct: 935  KGKNVGEASCWEKSKSPSIGEDRWNNGGPGWNQQKSGDKREDTGGGDGSTWGKALESQEK 994

Query: 655  KESSSGSKAVWNTSQATTEKET 720
               SS SK  W +S A  E +T
Sbjct: 995  GSGSSASKVDWKSSAARPENQT 1016


>ref|XP_015583775.1| PREDICTED: protein RNA-directed DNA methylation 3 [Ricinus communis]
          Length = 1721

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 57/169 (33%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
 Frame = +1

Query: 217  DVEDSAWATEVVPNHNSSWGADMTS--DKALGKTEEVGGWGKSVGGWNRXXXXXXXXXXX 390
            DV++ AW  +V  N NSSWGA   +  DK +   ++  GWGKS  GWN+           
Sbjct: 735  DVKEDAWERKVTSNQNSSWGAAAAAAADKVVDNNDQAHGWGKSEDGWNKTSTNIESSGGT 794

Query: 391  XXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPTDTSKDAAPSWGKNTEPWDKESNVT 570
               WG+A         S KD+G  WG+AK+    P +++ DAA +       W+KE NV 
Sbjct: 795  SGGWGKA-------ADSSKDSGDGWGQAKL---DPGNSTLDAAAA-------WNKEKNVA 837

Query: 571  ENPTRSWSSPNVQNQIESLGNVADKWTNKESSSGSKAVWNTSQATTEKE 717
            ENPT SW        + +  N  D WT+K++       W  S++ T  E
Sbjct: 838  ENPTSSW------GDVATAKNQQDSWTSKDTVESRS--WEKSKSFTAGE 878


>ref|XP_023879680.1| protein RNA-directed DNA methylation 3 isoform X3 [Quercus suber]
          Length = 1595

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 61/168 (36%), Positives = 77/168 (45%), Gaps = 26/168 (15%)
 Frame = +1

Query: 178  ANPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDK----ALGKTEEVGGWGKSVG 345
            ANP  S  N  KKDVE++AW T+  PN +SSWGA   ++K    A     E   WG +  
Sbjct: 692  ANPFSSEANDAKKDVENAAWETKAAPNQSSSWGAAAANEKSSWGAGTAANEKSSWGAAAA 751

Query: 346  GWNRXXXXXXXXXXXXXXWGRA---------NVTGDGQYG-SPKDAGANWGKAKVKSDSP 495
              N               WG A           T DG  G S K AG NWGK  +K  +P
Sbjct: 752  --NEKSSWGAGTAKENSSWGAAAANEKSSWGKSTPDGGLGSSSKVAGDNWGKGNLKVGTP 809

Query: 496  TDTSKDAAPSWGKNT------------EPWDKESNVTENPTRSWSSPN 603
            TD+S DA  +W KNT            EPW+K  +V+ +PT   S P+
Sbjct: 810  TDSSNDAVTTWKKNTVSDDQDGWKTSEEPWNKGKSVSASPTGGKSQPD 857


>ref|XP_023879679.1| protein RNA-directed DNA methylation 3 isoform X2 [Quercus suber]
 gb|POE76564.1| protein rna-directed dna methylation 3 [Quercus suber]
          Length = 1597

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 61/168 (36%), Positives = 77/168 (45%), Gaps = 26/168 (15%)
 Frame = +1

Query: 178  ANPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDK----ALGKTEEVGGWGKSVG 345
            ANP  S  N  KKDVE++AW T+  PN +SSWGA   ++K    A     E   WG +  
Sbjct: 694  ANPFSSEANDAKKDVENAAWETKAAPNQSSSWGAAAANEKSSWGAGTAANEKSSWGAAAA 753

Query: 346  GWNRXXXXXXXXXXXXXXWGRA---------NVTGDGQYG-SPKDAGANWGKAKVKSDSP 495
              N               WG A           T DG  G S K AG NWGK  +K  +P
Sbjct: 754  --NEKSSWGAGTAKENSSWGAAAANEKSSWGKSTPDGGLGSSSKVAGDNWGKGNLKVGTP 811

Query: 496  TDTSKDAAPSWGKNT------------EPWDKESNVTENPTRSWSSPN 603
            TD+S DA  +W KNT            EPW+K  +V+ +PT   S P+
Sbjct: 812  TDSSNDAVTTWKKNTVSDDQDGWKTSEEPWNKGKSVSASPTGGKSQPD 859


>ref|XP_023879678.1| protein RNA-directed DNA methylation 3 isoform X1 [Quercus suber]
 gb|POE76563.1| protein rna-directed dna methylation 3 [Quercus suber]
          Length = 1598

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 61/168 (36%), Positives = 77/168 (45%), Gaps = 26/168 (15%)
 Frame = +1

Query: 178  ANPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTSDK----ALGKTEEVGGWGKSVG 345
            ANP  S  N  KKDVE++AW T+  PN +SSWGA   ++K    A     E   WG +  
Sbjct: 695  ANPFSSEANDAKKDVENAAWETKAAPNQSSSWGAAAANEKSSWGAGTAANEKSSWGAAAA 754

Query: 346  GWNRXXXXXXXXXXXXXXWGRA---------NVTGDGQYG-SPKDAGANWGKAKVKSDSP 495
              N               WG A           T DG  G S K AG NWGK  +K  +P
Sbjct: 755  --NEKSSWGAGTAKENSSWGAAAANEKSSWGKSTPDGGLGSSSKVAGDNWGKGNLKVGTP 812

Query: 496  TDTSKDAAPSWGKNT------------EPWDKESNVTENPTRSWSSPN 603
            TD+S DA  +W KNT            EPW+K  +V+ +PT   S P+
Sbjct: 813  TDSSNDAVTTWKKNTVSDDQDGWKTSEEPWNKGKSVSASPTGGKSQPD 860


>ref|XP_017648917.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2
            [Gossypium arboreum]
          Length = 1580

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 70/241 (29%), Positives = 97/241 (40%), Gaps = 67/241 (27%)
 Frame = +1

Query: 190  KSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTS---DKALG----------KTEEVGGW 330
            + T+   K+D EDSAW T+V PN NSSWGA + S   DK +            T++   W
Sbjct: 689  QQTETDQKRDGEDSAWETKVTPNQNSSWGAAVCSGDNDKKIDGPSTAWENNTSTKQNSAW 748

Query: 331  -------GKSVGGWNRXXXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSD 489
                     S G WN+              WG+A  +GD   G+ KD G NWG++K+++ 
Sbjct: 749  ATGGSDQNASWGSWNKAAPKIDSSGGASDAWGKATSSGD-PLGASKDVGGNWGQSKLETG 807

Query: 490  SPTDTS------KDAAPSWG----KNTEPWDKESNVTE---------------------- 573
            +  D+S      KD + + G    K +E WD   NVTE                      
Sbjct: 808  NLADSSNITAWEKDKSINVGNDGWKKSESWDNGKNVTEGSSGAWDKGKGVAEPGSWGKNE 867

Query: 574  -------------NPTRSWSSPNVQNQIE--SLGNVADKWTNKESSSGSKAVWNTSQATT 708
                         N   SW   N     E  S G   +KW NK+ + GSK  W +S+   
Sbjct: 868  NSSSDWNNNAIGSNQQGSWGKKNDAGGFEDNSWGKAVEKWNNKDGTGGSKGNWGSSKLAA 927

Query: 709  E 711
            E
Sbjct: 928  E 928


>ref|XP_017648916.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1
            [Gossypium arboreum]
          Length = 1581

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 70/241 (29%), Positives = 97/241 (40%), Gaps = 67/241 (27%)
 Frame = +1

Query: 190  KSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTS---DKALG----------KTEEVGGW 330
            + T+   K+D EDSAW T+V PN NSSWGA + S   DK +            T++   W
Sbjct: 690  QQTETDQKRDGEDSAWETKVTPNQNSSWGAAVCSGDNDKKIDGPSTAWENNTSTKQNSAW 749

Query: 331  -------GKSVGGWNRXXXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSD 489
                     S G WN+              WG+A  +GD   G+ KD G NWG++K+++ 
Sbjct: 750  ATGGSDQNASWGSWNKAAPKIDSSGGASDAWGKATSSGD-PLGASKDVGGNWGQSKLETG 808

Query: 490  SPTDTS------KDAAPSWG----KNTEPWDKESNVTE---------------------- 573
            +  D+S      KD + + G    K +E WD   NVTE                      
Sbjct: 809  NLADSSNITAWEKDKSINVGNDGWKKSESWDNGKNVTEGSSGAWDKGKGVAEPGSWGKNE 868

Query: 574  -------------NPTRSWSSPNVQNQIE--SLGNVADKWTNKESSSGSKAVWNTSQATT 708
                         N   SW   N     E  S G   +KW NK+ + GSK  W +S+   
Sbjct: 869  NSSSDWNNNAIGSNQQGSWGKKNDAGGFEDNSWGKAVEKWNNKDGTGGSKGNWGSSKLAA 928

Query: 709  E 711
            E
Sbjct: 929  E 929


>gb|KHG26887.1| hypothetical protein F383_05296 [Gossypium arboreum]
          Length = 1583

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 70/241 (29%), Positives = 97/241 (40%), Gaps = 67/241 (27%)
 Frame = +1

Query: 190  KSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTS---DKALG----------KTEEVGGW 330
            + T+   K+D EDSAW T+V PN NSSWGA + S   DK +            T++   W
Sbjct: 692  QQTETDQKRDGEDSAWETKVTPNQNSSWGAAVCSGDNDKKIDGPSTAWENNTSTKQNSAW 751

Query: 331  -------GKSVGGWNRXXXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSD 489
                     S G WN+              WG+A  +GD   G+ KD G NWG++K+++ 
Sbjct: 752  ATGGSDQNASWGSWNKAAPKIDSSGGASDAWGKATSSGD-PLGASKDVGGNWGQSKLETG 810

Query: 490  SPTDTS------KDAAPSWG----KNTEPWDKESNVTE---------------------- 573
            +  D+S      KD + + G    K +E WD   NVTE                      
Sbjct: 811  NLADSSNITAWEKDKSINVGNDGWKKSESWDNGKNVTEGSSGAWDKGKGVAEPGSWGKNE 870

Query: 574  -------------NPTRSWSSPNVQNQIE--SLGNVADKWTNKESSSGSKAVWNTSQATT 708
                         N   SW   N     E  S G   +KW NK+ + GSK  W +S+   
Sbjct: 871  NSSSDWNNNAIGSNQQGSWGKKNDAGGFEDNSWGKAVEKWNNKDGTGGSKGNWGSSKLAA 930

Query: 709  E 711
            E
Sbjct: 931  E 931


>gb|KHG26886.1| hypothetical protein F383_05296 [Gossypium arboreum]
          Length = 1594

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 70/241 (29%), Positives = 97/241 (40%), Gaps = 67/241 (27%)
 Frame = +1

Query: 190  KSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTS---DKALG----------KTEEVGGW 330
            + T+   K+D EDSAW T+V PN NSSWGA + S   DK +            T++   W
Sbjct: 692  QQTETDQKRDGEDSAWETKVTPNQNSSWGAAVCSGDNDKKIDGPSTAWENNTSTKQNSAW 751

Query: 331  -------GKSVGGWNRXXXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSD 489
                     S G WN+              WG+A  +GD   G+ KD G NWG++K+++ 
Sbjct: 752  ATGGSDQNASWGSWNKAAPKIDSSGGASDAWGKATSSGD-PLGASKDVGGNWGQSKLETG 810

Query: 490  SPTDTS------KDAAPSWG----KNTEPWDKESNVTE---------------------- 573
            +  D+S      KD + + G    K +E WD   NVTE                      
Sbjct: 811  NLADSSNITAWEKDKSINVGNDGWKKSESWDNGKNVTEGSSGAWDKGKGVAEPGSWGKNE 870

Query: 574  -------------NPTRSWSSPNVQNQIE--SLGNVADKWTNKESSSGSKAVWNTSQATT 708
                         N   SW   N     E  S G   +KW NK+ + GSK  W +S+   
Sbjct: 871  NSSSDWNNNAIGSNQQGSWGKKNDAGGFEDNSWGKAVEKWNNKDGTGGSKGNWGSSKLAA 930

Query: 709  E 711
            E
Sbjct: 931  E 931


>ref|XP_016728063.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X2
            [Gossypium hirsutum]
          Length = 1826

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 70/241 (29%), Positives = 97/241 (40%), Gaps = 67/241 (27%)
 Frame = +1

Query: 190  KSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTS---DKALG----------KTEEVGGW 330
            + T+   K+D EDSAW T+V PN NSSWGA + S   DK +            T++   W
Sbjct: 689  QQTETDQKRDGEDSAWETKVTPNQNSSWGAAVCSGDNDKKIDGPSTAWENNTSTKQNSAW 748

Query: 331  -------GKSVGGWNRXXXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSD 489
                     S G WN+              WG+A  +GD   G+ KD G NWG++K+++ 
Sbjct: 749  ATGGIDQNASWGSWNKAAPKIDSSGGASDAWGKATSSGD-PLGASKDVGGNWGQSKLETG 807

Query: 490  SPTDTS------KDAAPSWG----KNTEPWDKESNVTE---------------------- 573
            +  D+S      KD + + G    K +E WD   NVTE                      
Sbjct: 808  NLADSSNITAWEKDKSINVGNDGWKKSESWDNGKNVTEGSSGAWDKGKGVAEPGSWGKNE 867

Query: 574  -------------NPTRSWSSPNVQNQIE--SLGNVADKWTNKESSSGSKAVWNTSQATT 708
                         N   SW   N     E  S G   +KW NK+ + GSK  W +S+   
Sbjct: 868  NSSSDWNNNAVGSNQQGSWGKKNDAGGFEDNSWGKAVEKWNNKDGTGGSKGNWGSSKLAA 927

Query: 709  E 711
            E
Sbjct: 928  E 928


>ref|XP_016728062.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X1
            [Gossypium hirsutum]
          Length = 1827

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 70/241 (29%), Positives = 97/241 (40%), Gaps = 67/241 (27%)
 Frame = +1

Query: 190  KSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTS---DKALG----------KTEEVGGW 330
            + T+   K+D EDSAW T+V PN NSSWGA + S   DK +            T++   W
Sbjct: 690  QQTETDQKRDGEDSAWETKVTPNQNSSWGAAVCSGDNDKKIDGPSTAWENNTSTKQNSAW 749

Query: 331  -------GKSVGGWNRXXXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSD 489
                     S G WN+              WG+A  +GD   G+ KD G NWG++K+++ 
Sbjct: 750  ATGGIDQNASWGSWNKAAPKIDSSGGASDAWGKATSSGD-PLGASKDVGGNWGQSKLETG 808

Query: 490  SPTDTS------KDAAPSWG----KNTEPWDKESNVTE---------------------- 573
            +  D+S      KD + + G    K +E WD   NVTE                      
Sbjct: 809  NLADSSNITAWEKDKSINVGNDGWKKSESWDNGKNVTEGSSGAWDKGKGVAEPGSWGKNE 868

Query: 574  -------------NPTRSWSSPNVQNQIE--SLGNVADKWTNKESSSGSKAVWNTSQATT 708
                         N   SW   N     E  S G   +KW NK+ + GSK  W +S+   
Sbjct: 869  NSSSDWNNNAVGSNQQGSWGKKNDAGGFEDNSWGKAVEKWNNKDGTGGSKGNWGSSKLAA 928

Query: 709  E 711
            E
Sbjct: 929  E 929


>gb|PPS08661.1| hypothetical protein GOBAR_AA11993 [Gossypium barbadense]
          Length = 1501

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 71/249 (28%), Positives = 98/249 (39%), Gaps = 75/249 (30%)
 Frame = +1

Query: 190  KSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTS---DKALG------------------ 306
            + T+   K+D EDSAW T+V PN NSSWGA + S   DK +G                  
Sbjct: 640  QQTETDQKRDGEDSAWETKVTPNQNSSWGAAVCSGDNDKKIGSNDTSCFNGPSTAWENNT 699

Query: 307  KTEEVGGW-------GKSVGGWNRXXXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANW 465
             T++   W         S G WN+              WG+A  +GD   G+ KD G NW
Sbjct: 700  STKQNSAWATGGIDQNASWGSWNKAAPKIDSSGGASDAWGKATSSGD-PLGASKDVGGNW 758

Query: 466  GKAKVKSDSPTDTS------KDAAPSWG----KNTEPWDKESNVTE-------------- 573
            G++K+++ +  D+S      KD + + G    K +E WD   NVTE              
Sbjct: 759  GQSKLETGNLADSSNITAWEKDKSINVGNDGWKKSESWDNGKNVTEGSSGAWDKGKGVAE 818

Query: 574  ---------------------NPTRSWSSPNVQNQIE--SLGNVADKWTNKESSSGSKAV 684
                                 N   SW   N     E  S G   +KW NK+ + GSK  
Sbjct: 819  PGSWGKNENSSSDWNNNAVGSNQQGSWGKKNDAGGFEDNSWGKAVEKWNNKDGTGGSKGN 878

Query: 685  WNTSQATTE 711
            W +S+   E
Sbjct: 879  WGSSKLAAE 887


>gb|PNX87207.1| transcription elongation factor SPT6, partial [Trifolium pratense]
          Length = 526

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 80/262 (30%), Positives = 109/262 (41%), Gaps = 22/262 (8%)
 Frame = +1

Query: 1   ETGHMARECSQ----GGGTGGNACFKCGETGHMARECSQXXXXXXXXXXXXXXXXXXXXX 168
           E+GHMAREC+Q    GGG GG AC+KCGE+GHMAR+C+Q                     
Sbjct: 214 ESGHMARECTQEGGGGGGRGGGACYKCGESGHMARDCTQESGGGGGWSSSGGRGRGRGRG 273

Query: 169 XXXANPLKSTDNVFKKDVED---SAW-----ATEVVPNHNSSWGADMTSDKALGKTEEVG 324
              ++   S D+    DV D   S W      +        SWG + T++++     E  
Sbjct: 274 RGSSHSSFSQDD--SMDVNDGGGSGWGGTGGGSGWGGTGGKSWGGNSTNEES---NTEKT 328

Query: 325 GWGKSVGG--WNRXXXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANWGKAKVKSDSPT 498
           GWG + GG  W                WG A  +  G      +  A WG A  K ++P+
Sbjct: 329 GWGVTTGGKTWG-GNSTNEESNTEKGGWGVATASNSGS----GNENAGWGAAPGKKETPS 383

Query: 499 DTS---KDAAPSWGKNTEPWDKESNVT-----ENPTRSWSSPNVQNQIESLGNVADKWTN 654
             S        SWG N+   +KESN T     EN    WS+   +N+  S G     W  
Sbjct: 384 GGSGWGTTGGTSWGGNSA--NKESNTTSNGGSENENAGWSAAPGKNETPSGG--GSGW-- 437

Query: 655 KESSSGSKAVWNTSQATTEKET 720
              ++G K+ W  S A  E  T
Sbjct: 438 --GATGGKS-WGGSGANEESNT 456



 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 28/41 (68%), Positives = 33/41 (80%), Gaps = 6/41 (14%)
 Frame = +1

Query: 1   ETGHMARECSQ------GGGTGGNACFKCGETGHMARECSQ 105
           E+GHMAREC+Q      GGG GG AC+KCGE+GHMAREC+Q
Sbjct: 33  ESGHMARECTQEGGGGRGGGRGGGACYKCGESGHMARECTQ 73



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 4/39 (10%)
 Frame = +1

Query: 1   ETGHMARECSQ----GGGTGGNACFKCGETGHMARECSQ 105
           E+GHMAREC+Q    GGG GG  C+KCGE+GHMAREC+Q
Sbjct: 93  ESGHMARECTQEGGGGGGGGGGNCYKCGESGHMARECTQ 131



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 27/40 (67%), Positives = 32/40 (80%), Gaps = 5/40 (12%)
 Frame = +1

Query: 1   ETGHMARECSQGGGTGGN-----ACFKCGETGHMARECSQ 105
           E+GHMAREC+Q GG GG      AC+KCGE+GHMAREC+Q
Sbjct: 156 ESGHMARECTQEGGGGGGRGGGGACYKCGESGHMARECTQ 195



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 27/40 (67%), Positives = 32/40 (80%), Gaps = 5/40 (12%)
 Frame = +1

Query: 1   ETGHMARECSQGGGTGGN-----ACFKCGETGHMARECSQ 105
           E+GHMAREC+Q GG GG      AC+KCGE+GHMAREC+Q
Sbjct: 185 ESGHMARECTQEGGGGGGRGGGGACYKCGESGHMARECTQ 224



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 26/41 (63%), Positives = 31/41 (75%), Gaps = 6/41 (14%)
 Frame = +1

Query: 1   ETGHMARECSQGGGTGGNA------CFKCGETGHMARECSQ 105
           E+GHMAREC+Q GG GG        C+KCGE+GHMAREC+Q
Sbjct: 63  ESGHMARECTQEGGGGGGRGGGGGNCYKCGESGHMARECTQ 103



 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 12/47 (25%)
 Frame = +1

Query: 1   ETGHMARECSQ------------GGGTGGNACFKCGETGHMARECSQ 105
           E+GHMAREC+Q            GGG GGN C+KCGE+GHMAREC+Q
Sbjct: 121 ESGHMARECTQEGGGGGGWGGGSGGGGGGN-CYKCGESGHMARECTQ 166


>ref|XP_021295530.1| LOW QUALITY PROTEIN: protein RNA-directed DNA methylation 3 [Herrania
            umbratica]
          Length = 1501

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 67/214 (31%), Positives = 90/214 (42%), Gaps = 41/214 (19%)
 Frame = +1

Query: 178  ANPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTS---DK----------------- 297
            +N   S D   KKD EDSAW  +V  N NSSWGA + S   DK                 
Sbjct: 686  SNLFGSEDTDLKKDGEDSAWGCKVTSNQNSSWGAAVCSGDNDKKTDDACTAWENKATTKQ 745

Query: 298  ----ALGKTEEVGGWGKSVGGWNRXXXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANW 465
                A G +++VG W      WN+              WG+A  +     G+ KD G +W
Sbjct: 746  NSAWATGGSDQVGSW----DSWNKAAAKTDSGSGASDAWGKAISSSGDPSGASKDVGGSW 801

Query: 466  GKAKVKSDSPTDTS------KD-----AAPSWGKNTEPWDKESNVTENPTRSWSSPNV-Q 609
            G+AK+K  +P D S      KD        SW K +E WDK  NVT+N +  W +    +
Sbjct: 802  GQAKLKIGNPADCSNITSWEKDKNMNVGDDSW-KKSESWDKGKNVTQNLSGVWDNAAAKK 860

Query: 610  NQIESLGNVAD-----KWTNKESSSGSKAVWNTS 696
            NQ+   G   D      W    +SS  +  WN +
Sbjct: 861  NQVNLWGKGKDVVDAGSWEKNGNSSVREGHWNNN 894


>gb|EOY18833.1| Kow domain-containing transcription factor 1, putative [Theobroma
            cacao]
          Length = 1596

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 66/214 (30%), Positives = 91/214 (42%), Gaps = 41/214 (19%)
 Frame = +1

Query: 178  ANPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTS---DK----------------- 297
            +N   S D   KKD EDSAW  +V  N N+SWGA + S   DK                 
Sbjct: 683  SNLFGSEDTDLKKDGEDSAWGCKVTSNQNASWGAAVCSGDNDKKTDDACTALENKATTKQ 742

Query: 298  ----ALGKTEEVGGWGKSVGGWNRXXXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANW 465
                A G +++VG W      WN+              WG+A  +     G+ KD G +W
Sbjct: 743  NSAWATGGSDQVGNW----DSWNKAAAKTDSGSGASDAWGKAITSSGDPSGASKDVGGSW 798

Query: 466  GKAKVKSDSPTDTS------KD-----AAPSWGKNTEPWDKESNVTENPTRSWSSPNV-Q 609
            G+AK+K  +P D+S      KD        SW K +E WDK  NVT+N +  W +    +
Sbjct: 799  GQAKLKIGNPADSSNITSWEKDKNMNVGDDSW-KKSESWDKGKNVTQNLSGVWDNAAAKK 857

Query: 610  NQIESLGNVAD-----KWTNKESSSGSKAVWNTS 696
            NQ+   G   D      W    +SS  +  WN +
Sbjct: 858  NQLNLWGKGKDVVEAGSWEKNGNSSVRQGHWNNN 891


>ref|XP_017984655.1| PREDICTED: protein RNA-directed DNA methylation 3 [Theobroma cacao]
          Length = 1503

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 75/266 (28%), Positives = 100/266 (37%), Gaps = 88/266 (33%)
 Frame = +1

Query: 178  ANPLKSTDNVFKKDVEDSAWATEVVPNHNSSWGADMTS---DK----------------- 297
            +N   S D   KKD EDSAW  +V  N N+SWGA + S   DK                 
Sbjct: 686  SNLFGSEDTDLKKDGEDSAWGCKVTSNQNASWGAAVCSGDNDKKTDDACTAWENKATTKQ 745

Query: 298  ----ALGKTEEVGGWGKSVGGWNRXXXXXXXXXXXXXXWGRANVTGDGQYGSPKDAGANW 465
                A G +++V  W      WN+              WG+A  +     G+ KD G +W
Sbjct: 746  NSAWATGGSDQVDNW----DSWNKAAAKTDSGSGASDAWGKAITSSGDPSGASKDVGGSW 801

Query: 466  GKAKVKSDSPTDTS------KD-----AAPSWGKNTEPWDKESNVTENPTRSW------- 591
            G+AK+K  +P D+S      KD        SW K +E WDK  NVT+N +  W       
Sbjct: 802  GQAKLKIGNPADSSNITSWEKDKNMNVGDDSW-KKSESWDKGKNVTQNLSGVWDNAAAKK 860

Query: 592  SSPNV--------------------------------QNQIES--------------LGN 633
            + PN+                                 NQ ES               G 
Sbjct: 861  NQPNLWGKGKDVVEAGSWEKNGNSSVRQGHWNNNALGSNQRESWGKKNDAGGSEDNTWGK 920

Query: 634  VADKWTNKESSSGSKAVWNTSQATTE 711
             A+KW+NK+ S GSK  W +S    E
Sbjct: 921  AAEKWSNKDDSGGSKGNWGSSTLAAE 946