BLASTX nr result
ID: Acanthopanax24_contig00020042
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00020042
(775 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017241149.1| PREDICTED: DNA-directed RNA polymerase III s... 345 e-118
emb|CDP07151.1| unnamed protein product [Coffea canephora] 320 e-106
ref|XP_017223786.1| PREDICTED: DNA-directed RNA polymerase III s... 313 e-105
ref|XP_017223790.1| PREDICTED: DNA-directed RNA polymerase III s... 307 e-103
ref|XP_015872858.1| PREDICTED: DNA-directed RNA polymerase III s... 296 2e-98
ref|XP_021681807.1| DNA-directed RNA polymerase III subunit RPC6... 294 2e-97
gb|PHU21484.1| hypothetical protein BC332_06591 [Capsicum chinense] 292 9e-97
ref|XP_016566434.1| PREDICTED: DNA-directed RNA polymerase III s... 292 1e-96
ref|XP_016567955.1| PREDICTED: DNA-directed RNA polymerase III s... 291 2e-96
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 291 2e-96
ref|XP_019235503.1| PREDICTED: DNA-directed RNA polymerase III s... 291 2e-96
ref|XP_016567954.1| PREDICTED: DNA-directed RNA polymerase III s... 291 2e-96
ref|XP_021672680.1| DNA-directed RNA polymerase III subunit RPC6... 291 3e-96
gb|PHU22197.1| hypothetical protein BC332_07304 [Capsicum chinense] 291 3e-96
emb|CBI33284.3| unnamed protein product, partial [Vitis vinifera] 293 5e-96
ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III s... 290 5e-96
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 290 5e-96
gb|PHT38570.1| hypothetical protein CQW23_22143 [Capsicum baccatum] 290 5e-96
gb|KRH01470.1| hypothetical protein GLYMA_18G279200 [Glycine max] 291 9e-96
ref|XP_022844231.1| DNA-directed RNA polymerase III subunit RPC6... 290 1e-95
>ref|XP_017241149.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Daucus
carota subsp. sativus]
ref|XP_017241156.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Daucus
carota subsp. sativus]
gb|KZN09540.1| hypothetical protein DCAR_002196 [Daucus carota subsp. sativus]
Length = 239
Score = 345 bits (886), Expect = e-118
Identities = 164/239 (68%), Positives = 199/239 (83%), Gaps = 1/239 (0%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDG-GQSSQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVN 574
MS+LQ+++ALKR R G +QSLG+ DR +L +++ KEDLGISI ++RR + LP Q+N
Sbjct: 1 MSQLQDSMALKRKRGSQGPGTQSLGETDRNILALVRGKEDLGISIAELRRASNLPANQLN 60
Query: 573 KSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLC 394
K+IKTL+ +LIKEVPNIKY+GGKHYM AEFEPSKELTGG WY DGKL++D I LK C
Sbjct: 61 KAIKTLITGQLIKEVPNIKYKGGKHYMGAEFEPSKELTGGEWYADGKLNQDLIEFLKSTC 120
Query: 393 LKIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHS 214
KI+ KLKVATA+GV+EFF + K+ K +VS QQIA+IL SMVLDNEILEVKS GLAEYHS
Sbjct: 121 KKIVAKLKVATAKGVHEFFVKYKVFKEDVSGQQIAQILNSMVLDNEILEVKSNGLAEYHS 180
Query: 213 IPIGEVCYRCVTGGSIGQAQKTGAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
IP+GEVCYRC GG +G+A K GAM SIPCGVCPRI++CTPDG+ISP+TCVYYT+WLDF
Sbjct: 181 IPVGEVCYRCAPGGGLGEAAKNGAMVSIPCGVCPRINICTPDGVISPTTCVYYTKWLDF 239
>emb|CDP07151.1| unnamed protein product [Coffea canephora]
Length = 334
Score = 320 bits (820), Expect = e-106
Identities = 155/239 (64%), Positives = 188/239 (78%), Gaps = 1/239 (0%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDGGQSSQ-SLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVN 574
MSR N +LKR R S+ SL DADR V N+IK+KED+GI DI+ +TKL T VN
Sbjct: 96 MSRSMNASSLKRKRPESSSANGSLVDADRAVFNVIKSKEDMGIWTRDIKFETKLADTVVN 155
Query: 573 KSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLC 394
KS+K+L+ KKLIKE+ NIK +G KHYMAAEFEPSKE+TGGAWYVDG LDK+ I +LK LC
Sbjct: 156 KSLKSLLSKKLIKEIVNIKNKGRKHYMAAEFEPSKEVTGGAWYVDGNLDKELIGVLKGLC 215
Query: 393 LKIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHS 214
LKII KVAT EGVY+F ++K+ + ++QQIAE+L SMVLDNE++EVKSTGL EYHS
Sbjct: 216 LKIINSKKVATVEGVYDFLTKSKVTTFDCTNQQIAEVLNSMVLDNEVIEVKSTGLGEYHS 275
Query: 213 IPIGEVCYRCVTGGSIGQAQKTGAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
IPIG VCYR G +G++ K GAMASIPCG+CPRIS CTPDG+ISPSTCVYY +W++F
Sbjct: 276 IPIGTVCYRIAKGAGLGESLKIGAMASIPCGMCPRISQCTPDGVISPSTCVYYQKWMNF 334
>ref|XP_017223786.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Daucus carota subsp. sativus]
ref|XP_017223787.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Daucus carota subsp. sativus]
ref|XP_017223788.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Daucus carota subsp. sativus]
ref|XP_017223789.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Daucus carota subsp. sativus]
gb|KZM83332.1| hypothetical protein DCAR_030901 [Daucus carota subsp. sativus]
Length = 240
Score = 313 bits (803), Expect = e-105
Identities = 155/241 (64%), Positives = 193/241 (80%), Gaps = 3/241 (1%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDGGQS--SQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQV 577
MSR+Q+TLAL+R R G Q+ +QSLGDADR VLNI++ KE GIS G+++R + LP +Q+
Sbjct: 1 MSRMQDTLALERRR-GRQNLFTQSLGDADRNVLNIVRGKETRGISSGELKRVSNLPTSQL 59
Query: 576 NKSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDL 397
NK+IK L+ +LIKEVPN++ GKHYM E+EPS ELTGG+WY +GKLD+D I +
Sbjct: 60 NKTIKALIASQLIKEVPNVRSTYGKHYMGVEYEPSTELTGGSWYANGKLDQDLINFFRGT 119
Query: 396 CLKIIGK-LKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEY 220
CL+I+ K LKVATAEGV+ FF + K K +VS + IAEILRS+VLDNEILEVKSTGLAEY
Sbjct: 120 CLQILQKKLKVATAEGVHSFFAKAKFYKGDVSREMIAEILRSLVLDNEILEVKSTGLAEY 179
Query: 219 HSIPIGEVCYRCVTGGSIGQAQKTGAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLD 40
HSIP+GEVCYR V GG G+A +TG M SIPCGVCP+I +CTPDG+ISP+ CVYYT+WLD
Sbjct: 180 HSIPVGEVCYRYVIGGGTGEASRTGVMVSIPCGVCPQIRLCTPDGVISPTNCVYYTKWLD 239
Query: 39 F 37
F
Sbjct: 240 F 240
>ref|XP_017223790.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Daucus carota subsp. sativus]
Length = 237
Score = 307 bits (787), Expect = e-103
Identities = 152/238 (63%), Positives = 190/238 (79%), Gaps = 3/238 (1%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDGGQS--SQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQV 577
MSR+Q+TLAL+R R G Q+ +QSLGDADR VLNI++ KE GIS G+++R + LP +Q+
Sbjct: 1 MSRMQDTLALERRR-GRQNLFTQSLGDADRNVLNIVRGKETRGISSGELKRVSNLPTSQL 59
Query: 576 NKSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDL 397
NK+IK L+ +LIKEVPN++ GKHYM E+EPS ELTGG+WY +GKLD+D I +
Sbjct: 60 NKTIKALIASQLIKEVPNVRSTYGKHYMGVEYEPSTELTGGSWYANGKLDQDLINFFRGT 119
Query: 396 CLKIIGK-LKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEY 220
CL+I+ K LKVATAEGV+ FF + K K +VS + IAEILRS+VLDNEILEVKSTGLAEY
Sbjct: 120 CLQILQKKLKVATAEGVHSFFAKAKFYKGDVSREMIAEILRSLVLDNEILEVKSTGLAEY 179
Query: 219 HSIPIGEVCYRCVTGGSIGQAQKTGAMASIPCGVCPRISMCTPDGIISPSTCVYYTEW 46
HSIP+GEVCYR V GG G+A +TG M SIPCGVCP+I +CTPDG+ISP+ CVYYT+W
Sbjct: 180 HSIPVGEVCYRYVIGGGTGEASRTGVMVSIPCGVCPQIRLCTPDGVISPTNCVYYTKW 237
>ref|XP_015872858.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ziziphus
jujuba]
Length = 238
Score = 296 bits (759), Expect = 2e-98
Identities = 144/239 (60%), Positives = 186/239 (77%), Gaps = 1/239 (0%)
Frame = -2
Query: 750 MSRLQNTLALKRTR-DGGQSSQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVN 574
MSRLQ LALKR R D S+SL + +R++ ++I++K+D+GI D++R+T LP VN
Sbjct: 1 MSRLQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVN 60
Query: 573 KSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLC 394
KS+K+L KKLIKEV NI+ +G KHYMAAEFEPSKE++GGAWYV+G LD +FI +LKD C
Sbjct: 61 KSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQC 120
Query: 393 LKIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHS 214
KII K +VAT EG+ + +R I KVE S+QQI EILR++VLDN +++VKS G+ E+ S
Sbjct: 121 AKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDS 180
Query: 213 IPIGEVCYRCVTGGSIGQAQKTGAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
IP+G+VCY+C G G+ K GAMASIPCGVCPRI+ CTPDGIISP+TCVYY +WLDF
Sbjct: 181 IPVGKVCYKCTNKGVRGE-PKAGAMASIPCGVCPRINHCTPDGIISPTTCVYYNKWLDF 238
>ref|XP_021681807.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
brasiliensis]
Length = 236
Score = 294 bits (752), Expect = 2e-97
Identities = 139/238 (58%), Positives = 183/238 (76%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDGGQSSQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVNK 571
MSRLQ ++ D +QSL + +R++ N+I++K+D+GI D++R+T LP VNK
Sbjct: 1 MSRLQGQK--RKQTDSNSPAQSLTEQERILYNVIRSKQDMGIWTRDMKRETNLPDNVVNK 58
Query: 570 SIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLCL 391
S+K L K LIKEV NI+ +G KHYMA EFEPSKE+TGGAWYV+G LD +FI ILK+ C
Sbjct: 59 SLKVLQAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIQILKEQCT 118
Query: 390 KIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHSI 211
K I KLKVAT EGV + KR+ + VE++ QQI EIL+++VLDNEI+E+KS G+ E+ SI
Sbjct: 119 KQIYKLKVATLEGVTDSIKRSGVLNVELTKQQIDEILKALVLDNEIIELKSNGMGEFASI 178
Query: 210 PIGEVCYRCVTGGSIGQAQKTGAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
P+G++CY+C++ G+IG +TGAMASIPCGVCPRI CTPDGIISP TCVYY++WLDF
Sbjct: 179 PVGKICYKCISKGNIGGEPRTGAMASIPCGVCPRIRQCTPDGIISPQTCVYYSKWLDF 236
>gb|PHU21484.1| hypothetical protein BC332_06591 [Capsicum chinense]
Length = 240
Score = 292 bits (748), Expect = 9e-97
Identities = 140/240 (58%), Positives = 190/240 (79%), Gaps = 2/240 (0%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDGGQS-SQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVN 574
MSR + A+KR R S +Q L DA+R+VL+++++K++LG+ + +++++ L T V+
Sbjct: 1 MSRSSDAAAMKRKRPNMDSPTQGLVDAERIVLDVVRSKKNLGVWVAEVKKEANLAPTIVD 60
Query: 573 KSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLC 394
KS+ +L+ KKLIK+V NI+ +G KHYMA EFEPS++LTGGAWY +GKLDK+FI +L+D C
Sbjct: 61 KSLTSLVKKKLIKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDTC 120
Query: 393 LKIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHS 214
LK+I +KVATAEG+++F K+ K+ VE +SQQ+AEIL SMVLDN I+EVKSTGL EYHS
Sbjct: 121 LKVIEMMKVATAEGIHDFLKKRKV--VECTSQQVAEILNSMVLDNAIIEVKSTGLGEYHS 178
Query: 213 IPIGEVCYRCVTGGSIGQAQKT-GAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
I +G VCYR +G ++G KT G MASIPCG CPRIS+CTP+GIISP TCVYYT+WL+F
Sbjct: 179 IAVGSVCYRSASGVALGTGPKTIGQMASIPCGACPRISLCTPNGIISPQTCVYYTKWLNF 238
>ref|XP_016566434.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
ref|XP_016566435.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
ref|XP_016566436.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
ref|XP_016566437.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
ref|XP_016566438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
ref|XP_016566439.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
ref|XP_016566441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
ref|XP_016566442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
gb|PHT38552.1| hypothetical protein CQW23_22125 [Capsicum baccatum]
gb|PHT85505.1| hypothetical protein T459_07611 [Capsicum annuum]
Length = 240
Score = 292 bits (747), Expect = 1e-96
Identities = 140/240 (58%), Positives = 189/240 (78%), Gaps = 2/240 (0%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDGGQS-SQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVN 574
MSR A+KR R S +Q L DA+R+VL+++++K++LG+ + +++++ L T V+
Sbjct: 1 MSRSSEAAAMKRKRPNMDSPTQGLVDAERIVLDVVRSKKNLGVWVAEVKKEANLAPTIVD 60
Query: 573 KSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLC 394
KS+ +L+ KKLIK+V NI+ +G KHYMA EFEPS++LTGGAWY +GKLDK+FI +L+D C
Sbjct: 61 KSLTSLVKKKLIKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDTC 120
Query: 393 LKIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHS 214
LK+I +KVATAEG+++F K+ K+ VE +SQQ+AEIL SMVLDN I+EVKSTGL EYHS
Sbjct: 121 LKVIEMMKVATAEGIHDFLKKRKV--VECTSQQVAEILNSMVLDNAIIEVKSTGLGEYHS 178
Query: 213 IPIGEVCYRCVTGGSIGQAQKT-GAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
I +G VCYR +G ++G KT G MASIPCG CPRIS+CTP+GIISP TCVYYT+WL+F
Sbjct: 179 IAVGSVCYRSASGVALGTGPKTIGQMASIPCGACPRISLCTPNGIISPQTCVYYTKWLNF 238
>ref|XP_016567955.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
isoform X2 [Capsicum annuum]
ref|XP_016567956.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
isoform X2 [Capsicum annuum]
Length = 238
Score = 291 bits (746), Expect = 2e-96
Identities = 138/240 (57%), Positives = 188/240 (78%), Gaps = 2/240 (0%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDGGQS-SQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVN 574
MSR A+KR R S +Q L DA+R+VL+++++K++LG+ + +++++ L T V+
Sbjct: 1 MSRSSEAAAMKRKRPNMDSPTQGLVDAERIVLDVVRSKKNLGVWVAEVKKEANLAPTIVD 60
Query: 573 KSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLC 394
KS+ +L+ KKL+K+V NI+ +G KHYMA EFEPS++LTGGAWY +GKLDK+FI +L+D C
Sbjct: 61 KSLTSLVKKKLVKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDTC 120
Query: 393 LKIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHS 214
LK+I +KVATAEG+++F K+ K+ VE +SQQ+AEIL SMVLDN I+EVKSTGL EYHS
Sbjct: 121 LKVIEMMKVATAEGIHDFLKKRKV--VECTSQQVAEILNSMVLDNAIIEVKSTGLGEYHS 178
Query: 213 IPIGEVCYRCVTGGSIGQAQKT-GAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
I +G VCYR +G + G KT G MASIPCG CPRIS+CTP+GI+SP TCVYYT+WL+F
Sbjct: 179 IAVGSVCYRSASGAAFGTGPKTIGQMASIPCGACPRISLCTPNGIVSPQTCVYYTKWLNF 238
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 291 bits (746), Expect = 2e-96
Identities = 142/239 (59%), Positives = 180/239 (75%), Gaps = 1/239 (0%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDGGQSSQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVNK 571
MSR Q + ++ D +SQ L DA+RV+ ++I++KED+GI D++R+T LP V K
Sbjct: 1 MSRSQGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTK 60
Query: 570 SIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLCL 391
S+K L KKLIKEV NI+ +G KHYMA EFEPSKELTGGAWYV+G LD ++I ILK+ C+
Sbjct: 61 SLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCV 120
Query: 390 KIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHSI 211
+++ KLKVATAEG+ E + + E S+QQIAEILR++VLDNEI+EV+S+G E+ SI
Sbjct: 121 RVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSI 180
Query: 210 PIGEVCYRCVTGGSIGQAQKT-GAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
PIG VCYRC G +G T GAMASIPCGVCPRI+ CTPDGIISP TC YYT+WLDF
Sbjct: 181 PIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239
>ref|XP_019235503.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana attenuata]
gb|OIT25732.1| hypothetical protein A4A49_30765 [Nicotiana attenuata]
Length = 240
Score = 291 bits (746), Expect = 2e-96
Identities = 143/239 (59%), Positives = 185/239 (77%), Gaps = 2/239 (0%)
Frame = -2
Query: 750 MSRLQNTLALKRTR-DGGQSSQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVN 574
MSRL A+KR R D +Q L DA+RVVL+++K K++LGI + +++++ LP T V+
Sbjct: 1 MSRLGEAAAMKRKRPDLDSPTQGLPDAERVVLSLVKNKKNLGIWVAEVKKEANLPPTLVD 60
Query: 573 KSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLC 394
KS+ L+ KKLIK+V NI+ +G KHYMA EFEPS+ELTGG+WY +G LDK+FI +L+D C
Sbjct: 61 KSLTALVKKKLIKQVVNIQNKGKKHYMAVEFEPSEELTGGSWYSEGNLDKEFITVLRDTC 120
Query: 393 LKIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHS 214
LK+I LKVAT EG++ F K+ K+ VE +SQQIAEIL SMVLDN I+EVKSTGL EYHS
Sbjct: 121 LKVIELLKVATVEGIHNFLKKRKV--VECTSQQIAEILNSMVLDNGIIEVKSTGLGEYHS 178
Query: 213 IPIGEVCYRCVTGGSIGQAQKT-GAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLD 40
IP+G VCYR +G ++G KT G MASIPCG CPRIS C+P+G+ISP TCVYYT+WL+
Sbjct: 179 IPVGSVCYRTASGVALGTGPKTIGPMASIPCGACPRISQCSPNGVISPETCVYYTKWLN 237
>ref|XP_016567954.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Capsicum annuum]
Length = 250
Score = 291 bits (746), Expect = 2e-96
Identities = 138/240 (57%), Positives = 188/240 (78%), Gaps = 2/240 (0%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDGGQS-SQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVN 574
MSR A+KR R S +Q L DA+R+VL+++++K++LG+ + +++++ L T V+
Sbjct: 13 MSRSSEAAAMKRKRPNMDSPTQGLVDAERIVLDVVRSKKNLGVWVAEVKKEANLAPTIVD 72
Query: 573 KSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLC 394
KS+ +L+ KKL+K+V NI+ +G KHYMA EFEPS++LTGGAWY +GKLDK+FI +L+D C
Sbjct: 73 KSLTSLVKKKLVKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDTC 132
Query: 393 LKIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHS 214
LK+I +KVATAEG+++F K+ K+ VE +SQQ+AEIL SMVLDN I+EVKSTGL EYHS
Sbjct: 133 LKVIEMMKVATAEGIHDFLKKRKV--VECTSQQVAEILNSMVLDNAIIEVKSTGLGEYHS 190
Query: 213 IPIGEVCYRCVTGGSIGQAQKT-GAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
I +G VCYR +G + G KT G MASIPCG CPRIS+CTP+GI+SP TCVYYT+WL+F
Sbjct: 191 IAVGSVCYRSASGAAFGTGPKTIGQMASIPCGACPRISLCTPNGIVSPQTCVYYTKWLNF 250
>ref|XP_021672680.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
brasiliensis]
ref|XP_021672688.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
brasiliensis]
Length = 236
Score = 291 bits (744), Expect = 3e-96
Identities = 139/238 (58%), Positives = 181/238 (76%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDGGQSSQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVNK 571
MSRL ++ D +QSL + +RV+ N+I++K+D+GI D++R+T LP VNK
Sbjct: 1 MSRLHGQK--RKQTDSNSPAQSLTEHERVLYNVIRSKQDMGIWTRDMKRETNLPDNVVNK 58
Query: 570 SIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLCL 391
S+K L K LIKEV NI+ +G KHYMA EFEPSKE+TGGAWYVDG LD +FI ILK+ C
Sbjct: 59 SLKVLQAKNLIKEVVNIQNKGRKHYMAMEFEPSKEITGGAWYVDGNLDTEFIQILKEQCT 118
Query: 390 KIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHSI 211
K I KLKVAT EGV + +R+ + VE++ QQI EI++++VLD+EI+EVKS G+ E+ SI
Sbjct: 119 KQIYKLKVATLEGVTDSIRRSGVLNVELTKQQIEEIVKALVLDDEIIEVKSNGMGEFASI 178
Query: 210 PIGEVCYRCVTGGSIGQAQKTGAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
P+G++CY+C+ GSIG KTGAMASIPCGVCPR+ CTPDGIISP TCVYY++WLDF
Sbjct: 179 PVGKICYKCIRKGSIGGEPKTGAMASIPCGVCPRMRQCTPDGIISPQTCVYYSKWLDF 236
>gb|PHU22197.1| hypothetical protein BC332_07304 [Capsicum chinense]
Length = 238
Score = 291 bits (744), Expect = 3e-96
Identities = 139/240 (57%), Positives = 188/240 (78%), Gaps = 2/240 (0%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDGGQS-SQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVN 574
MSR A+KR R S +Q L DA+R+VL+++++K++LG+ + +++++ L T V+
Sbjct: 1 MSRSSEAAAMKRKRPNMDSPTQGLVDAERIVLDVVRSKKNLGVWVAEVKKEANLAPTIVD 60
Query: 573 KSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLC 394
KS+ +L+ KKLIK+V NI+ +G KHYMA EFEPS++LTGGAWY +GKLDK+FI +L+D C
Sbjct: 61 KSLTSLVKKKLIKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDTC 120
Query: 393 LKIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHS 214
LK+I +KVATAEG+++F K+ K+ VE +SQQ+AEIL SMVLDN I+EVKSTGL EYHS
Sbjct: 121 LKVIEMMKVATAEGIHDFLKKRKV--VECTSQQVAEILNSMVLDNAIIEVKSTGLGEYHS 178
Query: 213 IPIGEVCYRCVTGGSIGQAQKT-GAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
I +G VCYR +G + G KT G MASIPCG CPRIS+CTP+GI+SP TCVYYT+WL+F
Sbjct: 179 IAVGSVCYRSASGVAFGTGPKTIGQMASIPCGACPRISLCTPNGIVSPQTCVYYTKWLNF 238
>emb|CBI33284.3| unnamed protein product, partial [Vitis vinifera]
Length = 300
Score = 293 bits (749), Expect = 5e-96
Identities = 143/240 (59%), Positives = 180/240 (75%), Gaps = 1/240 (0%)
Frame = -2
Query: 753 GMSRLQNTLALKRTRDGGQSSQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVN 574
GMSR Q + ++ D +SQ L DA+RV+ ++I++KED+GI D++R+T LP V
Sbjct: 61 GMSRSQGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 120
Query: 573 KSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLC 394
KS+K L KKLIKEV NI+ +G KHYMA EFEPSKELTGGAWYV+G LD ++I ILK C
Sbjct: 121 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 180
Query: 393 LKIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHS 214
++++ KLKVATAEG+ E + + E S+QQIAEILR++VLDNEI+EV+S+G E+ S
Sbjct: 181 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 240
Query: 213 IPIGEVCYRCVTGGSIGQAQKT-GAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
IPIG VCYRC G +G T GAMASIPCGVCPRI+ CTPDGIISP TC YYT+WLDF
Sbjct: 241 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 300
>ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Vitis
vinifera]
Length = 239
Score = 290 bits (743), Expect = 5e-96
Identities = 142/239 (59%), Positives = 179/239 (74%), Gaps = 1/239 (0%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDGGQSSQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVNK 571
MSR Q + ++ D +SQ L DA+RV+ ++I++KED+GI D++R+T LP V K
Sbjct: 1 MSRSQGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTK 60
Query: 570 SIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLCL 391
S+K L KKLIKEV NI+ +G KHYMA EFEPSKELTGGAWYV+G LD ++I ILK C+
Sbjct: 61 SLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCV 120
Query: 390 KIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHSI 211
+++ KLKVATAEG+ E + + E S+QQIAEILR++VLDNEI+EV+S+G E+ SI
Sbjct: 121 RVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSI 180
Query: 210 PIGEVCYRCVTGGSIGQAQKT-GAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
PIG VCYRC G +G T GAMASIPCGVCPRI+ CTPDGIISP TC YYT+WLDF
Sbjct: 181 PIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
ref|XP_010654780.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 290 bits (743), Expect = 5e-96
Identities = 147/240 (61%), Positives = 182/240 (75%), Gaps = 2/240 (0%)
Frame = -2
Query: 750 MSRLQNTLALKRTR-DGGQSSQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVN 574
MSR Q L+LKR R D +SQ L DA+RV+ ++I++KED+GI D++R+T LP V
Sbjct: 1 MSRSQG-LSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59
Query: 573 KSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLC 394
KS+K L KKLIKEV NI+ +G KHYMA EFEPSKELTGGAWYV+G LD ++I ILK+ C
Sbjct: 60 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119
Query: 393 LKIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHS 214
+K++ KLKVATAEG+ E + + E S+QQIAEILR++VLDNEI+EV+S+G E+ S
Sbjct: 120 VKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179
Query: 213 IPIGEVCYRCVT-GGSIGQAQKTGAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
IPIG VCYRC GG G K GAMASIPCGVCPRI+ CTPDGIISP +C YY +WLDF
Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWLDF 239
>gb|PHT38570.1| hypothetical protein CQW23_22143 [Capsicum baccatum]
Length = 240
Score = 290 bits (743), Expect = 5e-96
Identities = 139/240 (57%), Positives = 189/240 (78%), Gaps = 2/240 (0%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDGGQS-SQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVN 574
MSR A+KR R S +Q L DA+R+VL+++++K++LG+ + +++++ L T V+
Sbjct: 1 MSRSSEAAAMKRKRPNIDSPTQGLVDAERLVLDVVRSKKNLGVWVAEVKKEANLAPTIVD 60
Query: 573 KSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLC 394
KS+ +L+ KKLIK+V NI+ +G KHYMA EFEPS++LTGGAWY +GKLDK+FI +L+D C
Sbjct: 61 KSLTSLVKKKLIKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDTC 120
Query: 393 LKIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHS 214
LK+I +KVATAEG+++F K+ K+ VE +SQQ+AEIL SMVLDN I+EVKSTGL EYHS
Sbjct: 121 LKVIEMMKVATAEGIHDFLKKRKV--VECTSQQVAEILNSMVLDNAIIEVKSTGLGEYHS 178
Query: 213 IPIGEVCYRCVTGGSIGQAQKT-GAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLDF 37
I +G VCYR +G ++G KT G MASIPCG CPRIS+CTP+GI+SP TCVYYT+WL+F
Sbjct: 179 IAVGSVCYRSASGVALGTGPKTIGQMASIPCGACPRISLCTPNGIVSPQTCVYYTKWLNF 238
>gb|KRH01470.1| hypothetical protein GLYMA_18G279200 [Glycine max]
Length = 268
Score = 291 bits (744), Expect = 9e-96
Identities = 142/242 (58%), Positives = 184/242 (76%), Gaps = 1/242 (0%)
Frame = -2
Query: 759 FPGMSRLQNTLALKRTR-DGGQSSQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQT 583
F GMS LQ + +LKR R D + SL D +RV+ N+I +K+D+GI GD++R+T LP +
Sbjct: 27 FSGMSHLQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDS 86
Query: 582 QVNKSIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILK 403
V KS+K L K LIKEV NI+ +G KHYMAAEFEPSKE+TGG WY G+LD DFI ++K
Sbjct: 87 IVKKSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVK 146
Query: 402 DLCLKIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAE 223
D+CLK I + KVAT +GV E+ +++ + VEV++QQI EILR++VLD+EI+EVKSTG +
Sbjct: 147 DVCLKYIFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGD 206
Query: 222 YHSIPIGEVCYRCVTGGSIGQAQKTGAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWL 43
+ S+P+G +CYRC + G QK GAMASIPCGVCPRI+ CTPDGIISP TCVYY +WL
Sbjct: 207 FSSVPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWL 266
Query: 42 DF 37
DF
Sbjct: 267 DF 268
>ref|XP_022844231.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844232.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844233.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844234.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844235.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844236.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844237.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844238.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
Length = 239
Score = 290 bits (741), Expect = 1e-95
Identities = 144/237 (60%), Positives = 178/237 (75%)
Frame = -2
Query: 750 MSRLQNTLALKRTRDGGQSSQSLGDADRVVLNIIKAKEDLGISIGDIRRDTKLPQTQVNK 571
MSR T +LKR R L DA+R +LN IK+K+DLGI + DI+ +TKL VNK
Sbjct: 1 MSRSLETSSLKRKRPE-VDPLGLVDAERAILNAIKSKKDLGIWVRDIKHETKLTDHVVNK 59
Query: 570 SIKTLMGKKLIKEVPNIKYRGGKHYMAAEFEPSKELTGGAWYVDGKLDKDFIVILKDLCL 391
S+K+L+ +KLIKEV NI+Y+G KHYMA EFEPSKE++GG WYVDG LDK+ I +LK LCL
Sbjct: 60 SLKSLLTRKLIKEVVNIQYKGKKHYMAVEFEPSKEISGGVWYVDGNLDKELINVLKQLCL 119
Query: 390 KIIGKLKVATAEGVYEFFKRNKIAKVEVSSQQIAEILRSMVLDNEILEVKSTGLAEYHSI 211
+ I KVAT E V+E K+ ++ E+S QQ++EIL SMVLDNEI+EVKSTGL EY+SI
Sbjct: 120 RCIRVQKVATIERVHEDLKKQRVVTFEISIQQVSEILNSMVLDNEIIEVKSTGLGEYYSI 179
Query: 210 PIGEVCYRCVTGGSIGQAQKTGAMASIPCGVCPRISMCTPDGIISPSTCVYYTEWLD 40
PIG CYR +G + + K GA ASIPCG CPRIS+CTPDGIISPSTCVYYT+WL+
Sbjct: 180 PIGTSCYRFDSGALVAKGSKVGAFASIPCGACPRISLCTPDGIISPSTCVYYTKWLN 236