BLASTX nr result

ID: Acanthopanax24_contig00019369 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00019369
         (662 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF32854.1| conserved hypothetical protein [Ricinus communis]       45   1e-06

>gb|EEF32854.1| conserved hypothetical protein [Ricinus communis]
          Length = 253

 Score = 45.4 bits (106), Expect(2) = 1e-06
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +1

Query: 235 MYEYNHAERRTGLSKKEIIEPI 300
           MYEYNH+ERRT LSKKEIIEPI
Sbjct: 1   MYEYNHSERRTSLSKKEIIEPI 22



 Score = 35.4 bits (80), Expect(2) = 1e-06
 Identities = 21/46 (45%), Positives = 27/46 (58%)
 Frame = +3

Query: 384 RIEKSSIELNGVRKTGSEMXXXXXXXXXPP*NKGVRT*RKRLVMAL 521
           RIEKSSIEL+G+ KTGSEM            N+ + T R  +V A+
Sbjct: 36  RIEKSSIELHGMGKTGSEMAGLAGRRASQTRNRRLGTRRGSIVSAI 81


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