BLASTX nr result
ID: Acanthopanax24_contig00019338
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00019338
(598 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_021911101.1| exosome complex component CSL4, partial [Car... 76 1e-14
gb|KZN04684.1| hypothetical protein DCAR_005521 [Daucus carota s... 76 2e-14
ref|XP_010043311.1| PREDICTED: exosome complex component CSL4 [E... 77 6e-14
gb|PNT06771.1| hypothetical protein POPTR_013G049800v3 [Populus ... 76 1e-13
gb|ABK93772.1| unknown [Populus trichocarpa] >gi|1334291724|gb|P... 76 1e-13
ref|XP_004237511.1| PREDICTED: exosome complex component CSL4 [S... 76 1e-13
ref|XP_017231628.1| PREDICTED: exosome complex component CSL4 [D... 76 1e-13
gb|KZV23988.1| hypothetical protein F511_17976 [Dorcoceras hygro... 76 2e-13
gb|PKI41379.1| hypothetical protein CRG98_038265 [Punica granatum] 75 2e-13
ref|XP_006282467.2| exosome complex component CSL4 [Capsella rub... 75 3e-13
ref|XP_010441018.1| PREDICTED: exosome complex component CSL4 [C... 75 3e-13
gb|KDO52483.1| hypothetical protein CISIN_1g028346mg [Citrus sin... 75 3e-13
ref|XP_006443276.1| exosome complex component CSL4 isoform X1 [C... 75 3e-13
gb|EOA15365.1| hypothetical protein CARUB_v10005774mg, partial [... 75 3e-13
ref|XP_013722382.1| exosome complex component CSL4 [Brassica nap... 75 4e-13
ref|XP_006391337.1| exosome complex component CSL4 isoform X1 [E... 75 4e-13
ref|XP_010435798.1| PREDICTED: exosome complex component CSL4 [C... 75 4e-13
ref|XP_020872990.1| exosome complex component CSL4 [Arabidopsis ... 75 4e-13
gb|OAO91124.1| hypothetical protein AXX17_AT5G36260 [Arabidopsis... 75 4e-13
ref|NP_568559.2| Nucleic acid-binding, OB-fold-like protein [Ara... 75 4e-13
>ref|XP_021911101.1| exosome complex component CSL4, partial [Carica papaya]
Length = 88
Score = 75.9 bits (185), Expect = 1e-14
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVGA 122
LGVVSAESAAGATMVPISWTEMQCPL+GQ E RKVAKVGA
Sbjct: 49 LGVVSAESAAGATMVPISWTEMQCPLSGQIEQRKVAKVGA 88
>gb|KZN04684.1| hypothetical protein DCAR_005521 [Daucus carota subsp. sativus]
Length = 111
Score = 75.9 bits (185), Expect = 2e-14
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 6 GVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKV 116
GV+SAESA+GATMVPISWTEMQCPLTGQTEPRKVAKV
Sbjct: 73 GVISAESASGATMVPISWTEMQCPLTGQTEPRKVAKV 109
>ref|XP_010043311.1| PREDICTED: exosome complex component CSL4 [Eucalyptus grandis]
ref|XP_010043312.1| PREDICTED: exosome complex component CSL4 [Eucalyptus grandis]
ref|XP_010043313.1| PREDICTED: exosome complex component CSL4 [Eucalyptus grandis]
ref|XP_010043314.1| PREDICTED: exosome complex component CSL4 [Eucalyptus grandis]
gb|KCW85318.1| hypothetical protein EUGRSUZ_B02158 [Eucalyptus grandis]
gb|KCW85319.1| hypothetical protein EUGRSUZ_B02158 [Eucalyptus grandis]
Length = 200
Score = 77.0 bits (188), Expect = 6e-14
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVGA 122
LGV+SAESAAGATMVP+SWTEMQCPLTGQTE RKVAKVG+
Sbjct: 161 LGVLSAESAAGATMVPVSWTEMQCPLTGQTEKRKVAKVGS 200
>gb|PNT06771.1| hypothetical protein POPTR_013G049800v3 [Populus trichocarpa]
Length = 199
Score = 76.3 bits (186), Expect = 1e-13
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVGA 122
LGVVSAESAAGATMVPISWTEMQCPLTGQ E RKVAKVG+
Sbjct: 160 LGVVSAESAAGATMVPISWTEMQCPLTGQIEQRKVAKVGS 199
>gb|ABK93772.1| unknown [Populus trichocarpa]
gb|PNT06778.1| hypothetical protein POPTR_013G050400v3 [Populus trichocarpa]
Length = 199
Score = 76.3 bits (186), Expect = 1e-13
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVGA 122
LGVVSAESAAGATMVPISWTEMQCPLTGQ E RKVAKVG+
Sbjct: 160 LGVVSAESAAGATMVPISWTEMQCPLTGQIEQRKVAKVGS 199
>ref|XP_004237511.1| PREDICTED: exosome complex component CSL4 [Solanum lycopersicum]
Length = 200
Score = 76.3 bits (186), Expect = 1e-13
Identities = 37/40 (92%), Positives = 37/40 (92%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVGA 122
LGVVSAESAAG TMVPISWTEMQCPLTGQ EPRKVAKV A
Sbjct: 161 LGVVSAESAAGGTMVPISWTEMQCPLTGQVEPRKVAKVEA 200
>ref|XP_017231628.1| PREDICTED: exosome complex component CSL4 [Daucus carota subsp.
sativus]
Length = 194
Score = 75.9 bits (185), Expect = 1e-13
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 6 GVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKV 116
GV+SAESA+GATMVPISWTEMQCPLTGQTEPRKVAKV
Sbjct: 156 GVISAESASGATMVPISWTEMQCPLTGQTEPRKVAKV 192
>gb|KZV23988.1| hypothetical protein F511_17976 [Dorcoceras hygrometricum]
Length = 199
Score = 75.9 bits (185), Expect = 2e-13
Identities = 37/40 (92%), Positives = 37/40 (92%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVGA 122
LGVVSAES AGATMVPISWTEMQCPLTGQ E RKVAKVGA
Sbjct: 160 LGVVSAESVAGATMVPISWTEMQCPLTGQIEQRKVAKVGA 199
>gb|PKI41379.1| hypothetical protein CRG98_038265 [Punica granatum]
Length = 198
Score = 75.5 bits (184), Expect = 2e-13
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVGA 122
LGVVSAESAAGATM+PISWTEMQCPLTGQ E RKVAK+G+
Sbjct: 159 LGVVSAESAAGATMIPISWTEMQCPLTGQIEQRKVAKIGS 198
>ref|XP_006282467.2| exosome complex component CSL4 [Capsella rubella]
Length = 191
Score = 75.1 bits (183), Expect = 3e-13
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVGA 122
LGVVSAESAAG TMVPISWTEMQCPL+GQTE RKVAKVG+
Sbjct: 152 LGVVSAESAAGETMVPISWTEMQCPLSGQTEKRKVAKVGS 191
>ref|XP_010441018.1| PREDICTED: exosome complex component CSL4 [Camelina sativa]
ref|XP_010450856.1| PREDICTED: exosome complex component CSL4-like [Camelina sativa]
Length = 191
Score = 75.1 bits (183), Expect = 3e-13
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVGA 122
LGVVSAESAAG TMVPISWTEMQCPL+GQTE RKVAKVG+
Sbjct: 152 LGVVSAESAAGETMVPISWTEMQCPLSGQTEQRKVAKVGS 191
>gb|KDO52483.1| hypothetical protein CISIN_1g028346mg [Citrus sinensis]
Length = 198
Score = 75.1 bits (183), Expect = 3e-13
Identities = 36/39 (92%), Positives = 36/39 (92%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVG 119
LGVVSAES AG TMVPISWTEMQCPLTGQTE RKVAKVG
Sbjct: 159 LGVVSAESTAGGTMVPISWTEMQCPLTGQTEQRKVAKVG 197
>ref|XP_006443276.1| exosome complex component CSL4 isoform X1 [Citrus clementina]
ref|XP_006478973.1| PREDICTED: exosome complex component CSL4 [Citrus sinensis]
gb|ESR56516.1| hypothetical protein CICLE_v10022342mg [Citrus clementina]
Length = 198
Score = 75.1 bits (183), Expect = 3e-13
Identities = 36/39 (92%), Positives = 36/39 (92%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVG 119
LGVVSAES AG TMVPISWTEMQCPLTGQTE RKVAKVG
Sbjct: 159 LGVVSAESTAGGTMVPISWTEMQCPLTGQTEQRKVAKVG 197
>gb|EOA15365.1| hypothetical protein CARUB_v10005774mg, partial [Capsella rubella]
Length = 199
Score = 75.1 bits (183), Expect = 3e-13
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVGA 122
LGVVSAESAAG TMVPISWTEMQCPL+GQTE RKVAKVG+
Sbjct: 160 LGVVSAESAAGETMVPISWTEMQCPLSGQTEKRKVAKVGS 199
>ref|XP_013722382.1| exosome complex component CSL4 [Brassica napus]
emb|CDY39256.1| BnaC06g27350D [Brassica napus]
Length = 189
Score = 74.7 bits (182), Expect = 4e-13
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVG 119
LGVVSAESAAG TMVPISWTEMQCPL+GQTE RKVAKVG
Sbjct: 151 LGVVSAESAAGETMVPISWTEMQCPLSGQTEQRKVAKVG 189
>ref|XP_006391337.1| exosome complex component CSL4 isoform X1 [Eutrema salsugineum]
gb|ESQ28623.1| hypothetical protein EUTSA_v10019185mg [Eutrema salsugineum]
Length = 189
Score = 74.7 bits (182), Expect = 4e-13
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVG 119
LGVVSAESAAG TMVPISWTEMQCPL+GQTE RKVAKVG
Sbjct: 151 LGVVSAESAAGETMVPISWTEMQCPLSGQTEQRKVAKVG 189
>ref|XP_010435798.1| PREDICTED: exosome complex component CSL4 [Camelina sativa]
Length = 190
Score = 74.7 bits (182), Expect = 4e-13
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVG 119
LGVVSAESAAG TMVPISWTEMQCPL+GQTE RKVAKVG
Sbjct: 152 LGVVSAESAAGETMVPISWTEMQCPLSGQTEQRKVAKVG 190
>ref|XP_020872990.1| exosome complex component CSL4 [Arabidopsis lyrata subsp. lyrata]
Length = 191
Score = 74.7 bits (182), Expect = 4e-13
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVG 119
LGVVSAESAAG TMVPISWTEMQCPL+GQTE RKVAKVG
Sbjct: 152 LGVVSAESAAGETMVPISWTEMQCPLSGQTEQRKVAKVG 190
>gb|OAO91124.1| hypothetical protein AXX17_AT5G36260 [Arabidopsis thaliana]
Length = 191
Score = 74.7 bits (182), Expect = 4e-13
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVG 119
LGVVSAESAAG TMVPISWTEMQCPL+GQTE RKVAKVG
Sbjct: 152 LGVVSAESAAGETMVPISWTEMQCPLSGQTEQRKVAKVG 190
>ref|NP_568559.2| Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
gb|ABN04818.1| At5g38890 [Arabidopsis thaliana]
dbj|BAH19626.1| AT5G38890 [Arabidopsis thaliana]
gb|AED94369.1| Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
Length = 191
Score = 74.7 bits (182), Expect = 4e-13
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 3 LGVVSAESAAGATMVPISWTEMQCPLTGQTEPRKVAKVG 119
LGVVSAESAAG TMVPISWTEMQCPL+GQTE RKVAKVG
Sbjct: 152 LGVVSAESAAGETMVPISWTEMQCPLSGQTEQRKVAKVG 190