BLASTX nr result

ID: Acanthopanax24_contig00018357 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00018357
         (848 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZN01073.1| hypothetical protein DCAR_009827 [Daucus carota s...    66   1e-09
gb|KZM90594.1| hypothetical protein DCAR_022041 [Daucus carota s...    62   3e-07
gb|KZM94154.1| hypothetical protein DCAR_017399 [Daucus carota s...    57   3e-06

>gb|KZN01073.1| hypothetical protein DCAR_009827 [Daucus carota subsp. sativus]
          Length = 140

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 33/83 (39%), Positives = 47/83 (56%)
 Frame = +2

Query: 338 SSCSLNQWIQPEYPSRCYCGALVRMWEARKDCTKHIGRRFLGCINFQDNRAYCGFFKCYD 517
           SSC+  + IQ  +  +C CG +   WEA KD T   GRRF GC  ++D    C FF+  +
Sbjct: 5   SSCNTKRGIQ--HGIKCRCGIVAPCWEAWKDGTLDPGRRFYGCSRYKDPGRSCNFFQWAE 62

Query: 518 PPFPDKARAVIEDLMLKLKVNRE 586
           P F ++AR VI +L +K+    E
Sbjct: 63  PAFSERAREVIHELKMKVDARSE 85


>gb|KZM90594.1| hypothetical protein DCAR_022041 [Daucus carota subsp. sativus]
          Length = 837

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
 Frame = +2

Query: 239 LVRIHILKAIECEIEMMSSSWSG-TVN*FAEEDGSSCSLNQWIQPEYPSRCYCGALVRMW 415
           L++ ++L+     I   SSS S  +V       GS+ + + +       +C C  L  + 
Sbjct: 405 LIKCYLLQPSSMSISSKSSSSSSPSVQNSMRSYGSNRNNSGFDCGYSHLKCKCDILAPLQ 464

Query: 416 EARKDCTKHIGRRFLGCINFQDNRAYCGFFKCYDPPFPDKARAVIEDLMLKLKVNREMVN 595
           EA ++ T   GRRF GC N++D    C FF   DPP+ D+AR +I  L  K++V    + 
Sbjct: 465 EAWREGTMDPGRRFFGCSNYKDPTKKCNFFLWADPPYSDRARDIIHQLRFKMRVKDAELQ 524

Query: 596 KPK 604
           K K
Sbjct: 525 KMK 527



 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 29/74 (39%), Positives = 41/74 (55%)
 Frame = +2

Query: 383 RCYCGALVRMWEARKDCTKHIGRRFLGCINFQDNRAYCGFFKCYDPPFPDKARAVIEDLM 562
           +C C  L  + EA ++ T   GRRF GC N++D    C FF   DPP+ D+AR +I  L 
Sbjct: 39  KCKCDILAPLQEAWREGTMDPGRRFFGCSNYKDPTKKCNFFLWADPPYSDRARDIIHQLR 98

Query: 563 LKLKVNREMVNKPK 604
            K++V    + K K
Sbjct: 99  FKMRVKDAELQKMK 112


>gb|KZM94154.1| hypothetical protein DCAR_017399 [Daucus carota subsp. sativus]
          Length = 173

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/64 (43%), Positives = 37/64 (57%)
 Frame = +2

Query: 383 RCYCGALVRMWEARKDCTKHIGRRFLGCINFQDNRAYCGFFKCYDPPFPDKARAVIEDLM 562
           +C C        A K+ T + GRRF GC  ++D    C FF   DP FPD+AR VI++L 
Sbjct: 38  KCKCDLPAPCQVAWKEGTLNPGRRFFGCSRYKDPNKKCDFFLWADPSFPDRARDVIKELK 97

Query: 563 LKLK 574
           +KLK
Sbjct: 98  MKLK 101


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