BLASTX nr result

ID: Acanthopanax24_contig00018032 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00018032
         (429 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015875180.1| PREDICTED: uncharacterized protein LOC107412...    68   6e-11
gb|POE92383.1| pentatricopeptide repeat-containing protein [Quer...    65   1e-10
ref|XP_010260762.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-10
ref|XP_004293884.2| PREDICTED: uncharacterized protein LOC101313...    66   4e-10
ref|XP_004232622.1| PREDICTED: uncharacterized protein LOC101252...    66   4e-10
ref|XP_023927016.1| pentatricopeptide repeat-containing protein ...    65   1e-09
ref|XP_019230658.1| PREDICTED: uncharacterized protein LOC109211...    64   1e-09
ref|XP_003631195.2| PREDICTED: pentatricopeptide repeat-containi...    64   2e-09
ref|XP_009363268.1| PREDICTED: uncharacterized protein LOC103953...    64   2e-09
ref|XP_009772607.1| PREDICTED: uncharacterized protein LOC104222...    63   5e-09
ref|XP_024157406.1| uncharacterized protein LOC112165194 [Rosa c...    61   2e-08
dbj|GAV75046.1| PPR domain-containing protein/PPR_1 domain-conta...    61   3e-08
ref|XP_016478171.1| PREDICTED: uncharacterized protein LOC107799...    60   7e-08
ref|XP_008225928.1| PREDICTED: uncharacterized protein LOC103325...    60   8e-08
ref|XP_007211897.1| pentatricopeptide repeat-containing protein ...    60   8e-08
ref|XP_008371929.1| PREDICTED: uncharacterized protein LOC103435...    59   2e-07
ref|XP_008343549.1| PREDICTED: uncharacterized protein LOC103406...    59   2e-07
ref|XP_021827572.1| pentatricopeptide repeat-containing protein ...    58   3e-07
gb|PON47994.1| Pentatricopeptide repeat [Trema orientalis]             54   8e-06

>ref|XP_015875180.1| PREDICTED: uncharacterized protein LOC107412002 [Ziziphus jujuba]
          Length = 246

 Score = 68.2 bits (165), Expect = 6e-11
 Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
 Frame = +3

Query: 132 PALELRIRVFRGSLREARIKEAQELNEGLGCI--WSGGEGAQKVVALLDHMITNWEE 296
           P  +L+ R++RG L EARI+EA EL E LGC+    G EGA+KV+ALLDHMI NW+E
Sbjct: 190 PGGDLKKRIYRGLLWEARIREAMELYEALGCLGDGEGDEGARKVLALLDHMIANWKE 246


>gb|POE92383.1| pentatricopeptide repeat-containing protein [Quercus suber]
 gb|POE92384.1| pentatricopeptide repeat-containing protein [Quercus suber]
          Length = 122

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
 Frame = +3

Query: 132 PALELRIRVFRGSLREARIKEAQELNEGLGCIW--SGGEGAQKVVALLDHMITNWEE 296
           P  +L   V+RG LREAR++EA ELNE LG +W  SG E  +KV+ LLDH+I NW E
Sbjct: 66  PGRDLGKWVYRGLLREARVREAMELNEALGLVWDVSGDEAMKKVLGLLDHIIGNWTE 122


>ref|XP_010260762.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Nelumbo nucifera]
 ref|XP_010260764.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Nelumbo nucifera]
          Length = 241

 Score = 65.9 bits (159), Expect = 4e-10
 Identities = 31/54 (57%), Positives = 38/54 (70%)
 Frame = +3

Query: 135 ALELRIRVFRGSLREARIKEAQELNEGLGCIWSGGEGAQKVVALLDHMITNWEE 296
           A +LR +++R  LREARI EAQ+LNE L C+  G EG Q +V LLD MI NW E
Sbjct: 188 ANDLRTQIYRSLLREARITEAQQLNEALDCVQGGKEGVQNIVELLDRMIENWME 241


>ref|XP_004293884.2| PREDICTED: uncharacterized protein LOC101313880 isoform X2
           [Fragaria vesca subsp. vesca]
          Length = 251

 Score = 65.9 bits (159), Expect = 4e-10
 Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = +3

Query: 132 PALELRIRVFRGSLREARIKEAQELNEGLGCIWSG-GEGAQKVVALLDHMITNWEE 296
           P  +LR  V+RG LREARIKEA ELN+ L C+  G  EG +KV+ALLDHMI +W E
Sbjct: 196 PGCDLRKWVYRGLLREARIKEALELNKALDCVGDGESEGFRKVLALLDHMIDSWTE 251


>ref|XP_004232622.1| PREDICTED: uncharacterized protein LOC101252041 [Solanum
           lycopersicum]
          Length = 252

 Score = 65.9 bits (159), Expect = 4e-10
 Identities = 32/52 (61%), Positives = 42/52 (80%)
 Frame = +3

Query: 141 ELRIRVFRGSLREARIKEAQELNEGLGCIWSGGEGAQKVVALLDHMITNWEE 296
           E+R+ V+R  LREARIKEAQELNE L C+ +G +G ++VVALLD +I+NW E
Sbjct: 201 EVRMWVYRSLLREARIKEAQELNEDLKCVENGDKGNEEVVALLDSIISNWIE 252


>ref|XP_023927016.1| pentatricopeptide repeat-containing protein At4g11690-like [Quercus
           suber]
          Length = 256

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
 Frame = +3

Query: 132 PALELRIRVFRGSLREARIKEAQELNEGLGCIW--SGGEGAQKVVALLDHMITNWEE 296
           P  +L   V+RG LREAR++EA ELNE LG +W  SG E  +KV+ LLDH+I NW E
Sbjct: 200 PGRDLGKWVYRGLLREARVREAMELNEALGLVWDVSGDEAMKKVLGLLDHIIGNWTE 256


>ref|XP_019230658.1| PREDICTED: uncharacterized protein LOC109211564 [Nicotiana
           attenuata]
 gb|OIT06480.1| hypothetical protein A4A49_29890 [Nicotiana attenuata]
          Length = 246

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 32/52 (61%), Positives = 40/52 (76%)
 Frame = +3

Query: 141 ELRIRVFRGSLREARIKEAQELNEGLGCIWSGGEGAQKVVALLDHMITNWEE 296
           E+R+ V+R  LREARIKEAQELNE L C  +G +G ++VVA LD MI+NW E
Sbjct: 195 EVRMSVYRCLLREARIKEAQELNEALKCAENGDKGNEEVVAFLDSMISNWIE 246


>ref|XP_003631195.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Vitis vinifera]
 ref|XP_019077536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Vitis vinifera]
          Length = 254

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 33/55 (60%), Positives = 38/55 (69%)
 Frame = +3

Query: 132 PALELRIRVFRGSLREARIKEAQELNEGLGCIWSGGEGAQKVVALLDHMITNWEE 296
           PA +LR RV+R  LREARI EA+EL+  L C+  GGEG  KV  LLD MI NW E
Sbjct: 200 PAADLRTRVYRSLLREARIGEAKELDAVLRCVGDGGEGFGKVANLLDRMIGNWVE 254


>ref|XP_009363268.1| PREDICTED: uncharacterized protein LOC103953258 [Pyrus x
           bretschneideri]
 ref|XP_009363269.1| PREDICTED: uncharacterized protein LOC103953258 [Pyrus x
           bretschneideri]
          Length = 256

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
 Frame = +3

Query: 132 PALELRIRVFRGSLREARIKEAQELNEGLGCIWSG-----GEGAQKVVALLDHMITNWEE 296
           P   +R  V+RG LREARIKEA ELNE LGC+  G      EG +KV+ALLDHM+ NW +
Sbjct: 197 PGGGVRKWVYRGLLREARIKEAVELNEALGCVGVGANGDESEGVKKVLALLDHMLFNWTD 256


>ref|XP_009772607.1| PREDICTED: uncharacterized protein LOC104222965 isoform X1
           [Nicotiana sylvestris]
 ref|XP_016509262.1| PREDICTED: uncharacterized protein LOC107826749 [Nicotiana tabacum]
          Length = 246

 Score = 62.8 bits (151), Expect = 5e-09
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = +3

Query: 141 ELRIRVFRGSLREARIKEAQELNEGLGCIWSGGEGAQKVVALLDHMITNWEE 296
           E+R+ V+R  LREARIKEAQELNE L C  +G +G ++VVALLD +I++W E
Sbjct: 195 EVRMCVYRSLLREARIKEAQELNEALKCAENGDKGNEEVVALLDSVISDWIE 246


>ref|XP_024157406.1| uncharacterized protein LOC112165194 [Rosa chinensis]
 gb|PRQ30145.1| putative pentatricopeptide [Rosa chinensis]
          Length = 254

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
 Frame = +3

Query: 132 PALELRIRVFRGSLREARIKEAQELNEGLGCIWSG-----GEGAQKVVALLDHMITNWEE 296
           P   LR  V+RG LREARI+EA ELNE L C+         EG +KV+ALLDHMI  W E
Sbjct: 195 PGCNLRKWVYRGLLREARIREALELNEALDCVGDSEKGCVSEGFRKVLALLDHMIDKWTE 254


>dbj|GAV75046.1| PPR domain-containing protein/PPR_1 domain-containing protein
           [Cephalotus follicularis]
          Length = 257

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 32/55 (58%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
 Frame = +3

Query: 132 PALELRIRVFRGSLREARIKEAQELNEGLGCIWSG--GEGAQKVVALLDHMITNW 290
           P + LR  VFR  LREAR+KEA E +E L C+  G  GE  +KVV LLDHMI NW
Sbjct: 201 PGVGLRKTVFRSLLREARVKEAVEFDEALKCVGKGCEGEVVKKVVDLLDHMIANW 255


>ref|XP_016478171.1| PREDICTED: uncharacterized protein LOC107799557 [Nicotiana tabacum]
          Length = 247

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 29/52 (55%), Positives = 41/52 (78%)
 Frame = +3

Query: 141 ELRIRVFRGSLREARIKEAQELNEGLGCIWSGGEGAQKVVALLDHMITNWEE 296
           E+R+ V+R  LREARI+EAQELN+ L C  +G +G ++VVALLD +I++W E
Sbjct: 196 EVRMCVYRSLLREARIREAQELNKALKCAENGDKGNEEVVALLDGIISDWIE 247


>ref|XP_008225928.1| PREDICTED: uncharacterized protein LOC103325527 [Prunus mume]
 ref|XP_016648363.1| PREDICTED: uncharacterized protein LOC103325527 [Prunus mume]
 ref|XP_016648364.1| PREDICTED: uncharacterized protein LOC103325527 [Prunus mume]
          Length = 254

 Score = 59.7 bits (143), Expect = 8e-08
 Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
 Frame = +3

Query: 132 PALELRIRVFRGSLREARIKEAQELNEGLGCIWSGGEG-----AQKVVALLDHMITNWEE 296
           P  +L+  V++  LREARIKEA ELNE LGC+    +G      +KV+ALLDHMI NW E
Sbjct: 195 PGCDLKKWVYKVLLREARIKEAVELNEALGCVGDREKGDESECVKKVLALLDHMIGNWAE 254


>ref|XP_007211897.1| pentatricopeptide repeat-containing protein At4g11690 [Prunus
           persica]
 gb|ONI11660.1| hypothetical protein PRUPE_4G119000 [Prunus persica]
          Length = 254

 Score = 59.7 bits (143), Expect = 8e-08
 Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
 Frame = +3

Query: 132 PALELRIRVFRGSLREARIKEAQELNEGLGCIWSGGEG-----AQKVVALLDHMITNWEE 296
           P  +L+  V++  LREARIKEA ELNE LGC+    +G      +KV+ALLDHMI NW E
Sbjct: 195 PGCDLKKWVYKVLLREARIKEAVELNEALGCVGDREKGDESECVKKVLALLDHMIGNWAE 254


>ref|XP_008371929.1| PREDICTED: uncharacterized protein LOC103435322 [Malus domestica]
          Length = 254

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 33/55 (60%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
 Frame = +3

Query: 132 PALELRIRVFRGSLREARIKEAQELNEGLGCIWSG-----GEGAQKVVALLDHMI 281
           P   +R  V+RG LREARIKEA ELNE LGC+  G      EG +KV+ALLDHMI
Sbjct: 195 PGGGVRKWVYRGLLREARIKEAVELNEALGCVRVGANGDESEGVKKVLALLDHMI 249


>ref|XP_008343549.1| PREDICTED: uncharacterized protein LOC103406331 [Malus domestica]
          Length = 261

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 33/55 (60%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
 Frame = +3

Query: 132 PALELRIRVFRGSLREARIKEAQELNEGLGCIWSG-----GEGAQKVVALLDHMI 281
           P   +R  V+RG LREARIKEA ELNE LGC+  G      EG +KV+ALLDHMI
Sbjct: 202 PGGGVRKWVYRGLLREARIKEAVELNEALGCVRVGANGDESEGVKKVLALLDHMI 256


>ref|XP_021827572.1| pentatricopeptide repeat-containing protein At4g11690-like [Prunus
           avium]
 ref|XP_021827573.1| pentatricopeptide repeat-containing protein At4g11690-like [Prunus
           avium]
          Length = 254

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 5/60 (8%)
 Frame = +3

Query: 132 PALELRIRVFRGSLREARIKEAQELNEGLGCIWSGGEG-----AQKVVALLDHMITNWEE 296
           P   L+  V++  LREARIKEA ELNE LGC+    +G      +KV+ALLDHMI NW E
Sbjct: 195 PGCGLKKWVYKVLLREARIKEAVELNEALGCVGDREKGDESECVKKVLALLDHMIGNWAE 254


>gb|PON47994.1| Pentatricopeptide repeat [Trema orientalis]
          Length = 231

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 30/55 (54%), Positives = 36/55 (65%)
 Frame = +3

Query: 132 PALELRIRVFRGSLREARIKEAQELNEGLGCIWSGGEGAQKVVALLDHMITNWEE 296
           P  ELR  V+RG LREAR++EA ELN  L   +   EG +KV+ LLD MI NW E
Sbjct: 179 PRGELRELVYRGLLREARVREAMELNAALE--FDCDEGRKKVLELLDRMIENWSE 231


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