BLASTX nr result

ID: Acanthopanax24_contig00017564 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00017564
         (765 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021638551.1| uncharacterized protein LOC110633996 [Hevea ...    42   7e-06

>ref|XP_021638551.1| uncharacterized protein LOC110633996 [Hevea brasiliensis]
          Length = 341

 Score = 41.6 bits (96), Expect(2) = 7e-06
 Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
 Frame = +1

Query: 214 MRIRKR---FPSSS----PLSDPQLNRSPVVQQTSLQLHPNGNIRVQEAKXXXXXXXXXX 372
           MRIRKR   FP SS    PLSDP L+RSP  Q   LQ  P+ N   Q+AK          
Sbjct: 1   MRIRKRKVPFPLSSLSPVPLSDPHLSRSPSDQLQLLQSSPHQNFSPQDAKASFFVSQSSD 60

Query: 373 XXXXXXXXXXQQTIIAGERSKRILISDHELNIKQKQGEKERSTE 504
                            E  K++L+ + E    +K GE E+S +
Sbjct: 61  QPNYPIGAHDCSDGSWKEEEKKVLMQEGE----EKGGEGEKSND 100



 Score = 37.0 bits (84), Expect(2) = 7e-06
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = +3

Query: 573 DERWYEGDKAIPLKKRRGSFVGR 641
           D RW EG+KA P KKRRGSF  R
Sbjct: 125 DGRWCEGEKAFPFKKRRGSFERR 147


Top