BLASTX nr result

ID: Acanthopanax24_contig00017089 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00017089
         (667 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZN07453.1| hypothetical protein DCAR_008290 [Daucus carota s...    67   5e-11
emb|CDP12984.1| unnamed protein product [Coffea canephora]             65   3e-10

>gb|KZN07453.1| hypothetical protein DCAR_008290 [Daucus carota subsp. sativus]
          Length = 80

 Score = 66.6 bits (161), Expect = 5e-11
 Identities = 35/58 (60%), Positives = 42/58 (72%)
 Frame = -3

Query: 386 NSVPDKILDSVTFEKLSSRDEAVLNNTDGTEDDFRSKLISISNIQSPDFSVTRCNGHP 213
           +SVPDK  DSV FE   + ++AV  +TD   DD RSKLISIS+ QSPD + TRCNGHP
Sbjct: 24  DSVPDKKFDSVAFENFDNENKAVEISTDEV-DDIRSKLISISSKQSPDSNQTRCNGHP 80


>emb|CDP12984.1| unnamed protein product [Coffea canephora]
          Length = 87

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 32/56 (57%), Positives = 40/56 (71%)
 Frame = -3

Query: 383 SVPDKILDSVTFEKLSSRDEAVLNNTDGTEDDFRSKLISISNIQSPDFSVTRCNGH 216
           SVPD IL SV  E L++  + V  N+DG  D FRSKLISIS+++SPD  + RCNGH
Sbjct: 25  SVPDTILSSVVVETLNTGHQVVATNSDGA-DKFRSKLISISDLRSPDIGIIRCNGH 79


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