BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00016944
         (666 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PON38837.1| VQ motif containing protein [Trema orientalis]          76   2e-13
ref|XP_018809073.1| PREDICTED: sigma factor binding protein 1, c...    66   4e-10
ref|XP_023885601.1| sigma factor binding protein 1, chloroplasti...    66   6e-10
emb|CDP09565.1| unnamed protein product [Coffea canephora]             64   4e-09
ref|XP_009620855.1| PREDICTED: uncharacterized protein LOC104112...    62   2e-08
ref|XP_010089743.1| sigma factor binding protein 1, chloroplasti...    62   2e-08
ref|XP_010245501.1| PREDICTED: sigma factor binding protein 1, c...    61   3e-08
ref|XP_019162490.1| PREDICTED: uncharacterized protein LOC109158...    61   4e-08
ref|XP_003625000.1| VQ motif protein [Medicago truncatula] >gi|3...    61   5e-08
ref|XP_017247538.1| PREDICTED: sigma factor binding protein 1, c...    58   4e-07
ref|XP_010276684.1| PREDICTED: sigma factor binding protein 1, c...    58   5e-07
ref|XP_021664962.1| sigma factor binding protein 1, chloroplasti...    55   8e-06

>gb|PON38837.1| VQ motif containing protein [Trema orientalis]
          Length = 183

 Score = 75.9 bits (185), Expect = 2e-13
 Identities = 53/140 (37%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
 Frame = -1

Query: 555 YISNPMKVETSASQFRALVQQLTGRDADTTLGRNYCATDRVG--------------SRGR 418
           YISNPMKV+TSAS+FRALVQ+LTG+DA+      + AT+  G              S   
Sbjct: 38  YISNPMKVKTSASKFRALVQELTGQDAEFPDPTKFPATEDDGAVTGDPTVKMGSSSSLDL 97

Query: 417 DHQGLIVPHXXXXXXXXXXXXXXXXXXXXXXAPTTLVQSSSELGNGSDLSFDDDVFMPQM 238
           DH G++V                          TT    ++   N S  +FDDDVFMPQM
Sbjct: 98  DHDGVVVEIDMSSSSSLEQQHQVESSSTANIITTT----TNNNNNTSLEAFDDDVFMPQM 153

Query: 237 LLDNFPDFLPSNFWYESTHI 178
            +D+    LPS+ WYES  +
Sbjct: 154 -MDSLSGILPSSVWYESPQL 172


>ref|XP_018809073.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Juglans regia]
          Length = 151

 Score = 66.2 bits (160), Expect = 4e-10
 Identities = 50/135 (37%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
 Frame = -1

Query: 555 YISNPMKVETSASQFRALVQQLTGRDADTTLGRNYCATDR-VGSRGRDHQGLIVPHXXXX 379
           YISNPMKV+TSASQFRALVQ+LTG+DA+  +   +  TD  VG     HQ +  P     
Sbjct: 31  YISNPMKVKTSASQFRALVQELTGQDAEFPVPTKFLCTDNDVGG----HQTVPGP----- 81

Query: 378 XXXXXXXXXXXXXXXXXXAPTTLVQSSSELGNGSDLSF----DDDVFMPQMLLDNFP--- 220
                                 +V    E    S   F    DDDVF P   ++N P   
Sbjct: 82  --------VMKAGSDDYSPEAPVVDLGQEQTESSGYQFDPYDDDDVFTPLQTIENLPAAG 133

Query: 219 -DFLPSNFWYESTHI 178
             FLPS+ +YES  +
Sbjct: 134 TSFLPSSVFYESPQV 148


>ref|XP_023885601.1| sigma factor binding protein 1, chloroplastic-like [Quercus suber]
 gb|POF22481.1| sigma factor binding protein 2, chloroplastic [Quercus suber]
          Length = 167

 Score = 66.2 bits (160), Expect = 6e-10
 Identities = 50/129 (38%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
 Frame = -1

Query: 555 YISNPMKVETSASQFRALVQQLTGRDADTTLGRNYCATD-RVGSRGRDHQGLIVPHXXXX 379
           YISNPMKV+TSASQFRALVQ+LTG+D++      +   D  VG  GR HQ    P     
Sbjct: 34  YISNPMKVKTSASQFRALVQELTGQDSELPDPTKFSNKDEHVG--GRQHQTAPDPR-IND 90

Query: 378 XXXXXXXXXXXXXXXXXXAPTTLVQSSSELGNGSDLSFD--DDVFMPQMLLDNFPDFLPS 205
                              PT    +S E    S   F+  DDVF PQM  DN    LP+
Sbjct: 91  DNKMDGDDDDDDHSQQEEVPTVDPSTSQEQPESSSSQFEPYDDVFTPQM-FDNLSGLLPN 149

Query: 204 NFWYESTHI 178
             +Y+S  +
Sbjct: 150 TVFYDSPQL 158


>emb|CDP09565.1| unnamed protein product [Coffea canephora]
          Length = 148

 Score = 63.5 bits (153), Expect = 4e-09
 Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
 Frame = -1

Query: 555 YISNPMKVETSASQFRALVQQLTGRDADTTLGRNYCATDRVGSRGRDHQGLIVPHXXXXX 376
           YISNPMKV+TSAS+FRALVQ+LTG+DAD      Y  TD VG   ++             
Sbjct: 27  YISNPMKVKTSASEFRALVQELTGQDADMPDPTKYSDTDSVGGSCQEE------------ 74

Query: 375 XXXXXXXXXXXXXXXXXAPTTLVQSSSELGNGSDLSF--------DDDVFMPQMLLDNFP 220
                                LVQ  +E+   +D +         DD ++MP    ++FP
Sbjct: 75  ----VSTELKTMEDDQVVQQPLVQPKNEMPERADCNIYGTCDREDDDLLYMP----ESFP 126

Query: 219 DFLPSNFWYESTHIGPDEK 163
             + SN WY ++  G + K
Sbjct: 127 GLVASNLWYGASIHGDELK 145


>ref|XP_009620855.1| PREDICTED: uncharacterized protein LOC104112594 [Nicotiana
           tomentosiformis]
 ref|XP_016471588.1| PREDICTED: uncharacterized protein LOC107793698 [Nicotiana tabacum]
          Length = 141

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 46/129 (35%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
 Frame = -1

Query: 555 YISNPMKVETSASQFRALVQQLTGRDADTTLGRNYCATDRVGSRGR--DHQGLIVPHXXX 382
           YI+NPMKV TSA++FRALVQ+LTG+DA   +         VGSRG   D  G        
Sbjct: 24  YIANPMKVNTSAAEFRALVQELTGQDAKYPM-----IESSVGSRGTECDKNG-----KFK 73

Query: 381 XXXXXXXXXXXXXXXXXXXAPTTLVQSSSELGNGSDLSFDD-----DVFMPQMLLDNFPD 217
                                     S + + + SDLSF+D     + F+P+ LLDN P 
Sbjct: 74  KGFYLSESLPDKDLQVVHAVDGVAPNSEAAMTDNSDLSFEDYGVGGEDFVPE-LLDNLPG 132

Query: 216 FLPSNFWYE 190
            + SN WY+
Sbjct: 133 LMASNLWYD 141


>ref|XP_010089743.1| sigma factor binding protein 1, chloroplastic [Morus notabilis]
 gb|EXB38304.1| hypothetical protein L484_013937 [Morus notabilis]
          Length = 161

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 45/137 (32%), Positives = 59/137 (43%), Gaps = 12/137 (8%)
 Frame = -1

Query: 555 YISNPMKVETSASQFRALVQQLTGRDAD--------TTLGRNYCATDRVGSRGRDHQGLI 400
           YISNPMK++TSAS+FRALVQ+LTG+DA+         T G +    D     G DH    
Sbjct: 35  YISNPMKIKTSASEFRALVQELTGQDAEFPDPTKFLATNGEDQVGVDSTVKIGGDHSN-- 92

Query: 399 VPHXXXXXXXXXXXXXXXXXXXXXXAPTTLVQSSSELGNGSDLSFDDDVFMPQML----L 232
                                       T   +SS        + DDDVFMPQM+     
Sbjct: 93  ----------------------SQEQGATESNNSSTTTTSRYEALDDDVFMPQMMESFEA 130

Query: 231 DNFPDFLPSNFWYESTH 181
             FP    ++ WY+S +
Sbjct: 131 GIFPSSATASVWYDSAN 147


>ref|XP_010245501.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Nelumbo nucifera]
          Length = 145

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 52/138 (37%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
 Frame = -1

Query: 555 YISNPMKVETSASQFRALVQQLTGRDADTTLGRNYCATDRVGSRGRDHQGLIVPHXXXXX 376
           YISNPMKV+TSASQFRALVQ+LTGRD+D T    +   D V          +VP      
Sbjct: 26  YISNPMKVKTSASQFRALVQELTGRDSDETDATRFSDFDSVDG------VQVVP------ 73

Query: 375 XXXXXXXXXXXXXXXXXAPTTLVQSSSELGNGSDLSFD--DDVFMPQMLLDNFPDFLPSN 202
                             P       S   + S+L F+  +DVF PQM L++F  F PS+
Sbjct: 74  ----DQVAKVTYDDSPEIPRVDTYQESPASSDSNL-FEPFNDVFTPQM-LESFAGFFPSS 127

Query: 201 FWYESTHI----GPDEKV 160
              ES  +     PDE V
Sbjct: 128 LTTESLQVDIFRNPDEVV 145


>ref|XP_019162490.1| PREDICTED: uncharacterized protein LOC109158988 [Ipomoea nil]
          Length = 151

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 50/130 (38%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
 Frame = -1

Query: 555 YISNPMKVETSASQFRALVQQLTGRDADTTLGRNYCATDRVGSRG------RDHQGLIVP 394
           YISNP++V TSA++FRALVQ+LTG+DAD      + A    G +G       DH  L VP
Sbjct: 40  YISNPVRVNTSAAKFRALVQELTGQDADDLPVTPHAAATGGGRQGSCVQAMEDHVVLQVP 99

Query: 393 HXXXXXXXXXXXXXXXXXXXXXXAPTTLVQSSSELGNGSDLSFDDDVFMPQMLLDNFP-D 217
                                   P T   SS      S+L F+D  ++PQ L ++FP  
Sbjct: 100 -------------TTSIHHHHHHHPGTTDTSS----ENSNLIFEDS-YVPQ-LQESFPAG 140

Query: 216 FLPSNFWYES 187
            LPSN WYES
Sbjct: 141 ILPSNIWYES 150


>ref|XP_003625000.1| VQ motif protein [Medicago truncatula]
 gb|AES81218.1| VQ motif protein [Medicago truncatula]
          Length = 165

 Score = 60.8 bits (146), Expect = 5e-08
 Identities = 43/123 (34%), Positives = 60/123 (48%)
 Frame = -1

Query: 555 YISNPMKVETSASQFRALVQQLTGRDADTTLGRNYCATDRVGSRGRDHQGLIVPHXXXXX 376
           YISNPMKV+TSAS+FRALVQ+LTG+ A++    +      V   G D  G          
Sbjct: 46  YISNPMKVKTSASEFRALVQELTGQYAESPPNPSRFQEFDVNDSGTDQGGCENMMDCDKS 105

Query: 375 XXXXXXXXXXXXXXXXXAPTTLVQSSSELGNGSDLSFDDDVFMPQMLLDNFPDFLPSNFW 196
                             P       SE G+ ++ SFD+DV +   ++DN  D LP++ +
Sbjct: 106 DQTVVGVPSLVDPDDKGKP-------SEAGSSNE-SFDEDVLLMPEMMDNIWDLLPTSAF 157

Query: 195 YES 187
           YES
Sbjct: 158 YES 160


>ref|XP_017247538.1| PREDICTED: sigma factor binding protein 1, chloroplastic [Daucus
           carota subsp. sativus]
 gb|KZM98995.1| hypothetical protein DCAR_013643 [Daucus carota subsp. sativus]
          Length = 139

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 47/123 (38%), Positives = 56/123 (45%)
 Frame = -1

Query: 555 YISNPMKVETSASQFRALVQQLTGRDADTTLGRNYCATDRVGSRGRDHQGLIVPHXXXXX 376
           YISNPMKV TSASQFRALVQ+LTGRDAD      +     V     + Q  +V       
Sbjct: 30  YISNPMKVNTSASQFRALVQELTGRDADDLPAPPFLQHFNVD----NSQEQVV------- 78

Query: 375 XXXXXXXXXXXXXXXXXAPTTLVQSSSELGNGSDLSFDDDVFMPQMLLDNFPDFLPSNFW 196
                            A  TL     +  NGSDL       +P   ++ +  F PSNFW
Sbjct: 79  --REQEEKEVHKEAEQAATATLCVDDEDKHNGSDL-------LPLQDINGY--FSPSNFW 127

Query: 195 YES 187
           YES
Sbjct: 128 YES 130


>ref|XP_010276684.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Nelumbo nucifera]
          Length = 142

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 48/117 (41%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = -1

Query: 555 YISNPMKVETSASQFRALVQQLTGRDAD-TTLGRNYCATDRVGSRGRDHQGLIVPHXXXX 379
           YISNPMKV+TSAS+FRALVQ+LTGRD+D T     +  TD V  R  D    I       
Sbjct: 26  YISNPMKVKTSASEFRALVQELTGRDSDLTDTVARFSDTDSV-QRVPDQPIKITNEGVAE 84

Query: 378 XXXXXXXXXXXXXXXXXXAPTTLVQSSSELGNGSDLSFDDDVFMPQMLLDNFPDFLP 208
                                   Q S    + S L   DDVF PQM L+NF  FLP
Sbjct: 85  VPR-----------------VDAYQESPAASSDSLLEPFDDVFTPQM-LENFVGFLP 123


>ref|XP_021664962.1| sigma factor binding protein 1, chloroplastic-like [Hevea
           brasiliensis]
          Length = 157

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 46/126 (36%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
 Frame = -1

Query: 555 YISNPMKVETSASQFRALVQQLTGRDADTTLGRNYCATDR----VGSRGRDHQGLIVPHX 388
           YISNP+K +T AS+FRALVQ+LTG+DA+      +   D      G  GR    L VP  
Sbjct: 32  YISNPVKFKTCASKFRALVQKLTGQDAELPDPSRFTDNDSNGGGGGGGGRYVNNLTVPDN 91

Query: 387 XXXXXXXXXXXXXXXXXXXXXAPTTLVQSSSELGNGSDLSFDDDVFMPQMLLDNFPDFLP 208
                                 P T       L    + SF DD+FMPQM L NF   LP
Sbjct: 92  ASKTVDDLALEVPTVDLSAKQLPETPDAPPHPL----ESSF-DDIFMPQM-LQNFSGLLP 145

Query: 207 SNFWYE 190
           S+   E
Sbjct: 146 SSLLSE 151