BLASTX nr result

ID: Acanthopanax24_contig00016638 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00016638
         (553 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZN07038.1| hypothetical protein DCAR_007875 [Daucus carota s...    68   5e-12
gb|KZM84688.1| hypothetical protein DCAR_027890 [Daucus carota s...    56   6e-07

>gb|KZN07038.1| hypothetical protein DCAR_007875 [Daucus carota subsp. sativus]
          Length = 69

 Score = 68.2 bits (165), Expect = 5e-12
 Identities = 43/66 (65%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
 Frame = +1

Query: 25  TARLAPVMFSAKLLRSPSSIL--TELSETSPRTPFSAVAPPRYH--LPIFISRIQTQKNL 192
           TARLAP+MFS+K+LR PS      EL ++S RTPFSAVAPP  H  LP    RIQ QKNL
Sbjct: 5   TARLAPMMFSSKVLR-PSIFQPKVELPQSSTRTPFSAVAPPCRHDQLPQPFFRIQPQKNL 63

Query: 193 ETIFEE 210
           ETIFEE
Sbjct: 64  ETIFEE 69


>gb|KZM84688.1| hypothetical protein DCAR_027890 [Daucus carota subsp. sativus]
          Length = 118

 Score = 56.2 bits (134), Expect = 6e-07
 Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
 Frame = +1

Query: 28  ARLAPVMFSAKLLRS---PSSILTELSETSPRTPFSAVAPPRYHLPIFISRIQTQKNLET 198
           +RL P+ FS ++LR    P+ I  E+S+ SPRTPFSAV+P  +HL + I R    K LET
Sbjct: 3   SRLIPLKFSTQVLRPTILPAKI--EISDNSPRTPFSAVSPAHHHL-LEIPRAPIHKTLET 59

Query: 199 IFEED 213
           IFEE+
Sbjct: 60  IFEEE 64


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