BLASTX nr result
ID: Acanthopanax24_contig00016529
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00016529
(839 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP04690.1| unnamed protein product [Coffea canephora] 70 2e-12
ref|XP_017257753.1| PREDICTED: uncharacterized protein LOC108227... 75 2e-11
ref|XP_017257752.1| PREDICTED: protein artemis isoform X1 [Daucu... 75 2e-11
emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera] 66 2e-10
ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo [Vitis vini... 66 2e-10
emb|CBI37538.3| unnamed protein product, partial [Vitis vinifera] 67 8e-09
ref|XP_011464900.1| PREDICTED: protein artemis [Fragaria vesca s... 66 2e-08
ref|XP_021662155.1| 5' exonuclease Apollo-like isoform X1 [Hevea... 60 6e-08
ref|XP_021662156.1| uncharacterized protein LOC110651203 isoform... 60 6e-08
ref|XP_024183096.1| uncharacterized protein LOC112188252 [Rosa c... 63 2e-07
ref|XP_021899870.1| uncharacterized protein LOC110816133 isoform... 63 2e-07
ref|XP_021899869.1| uncharacterized protein LOC110816133 isoform... 63 2e-07
ref|XP_021899868.1| 5' exonuclease Apollo isoform X1 [Carica pap... 63 2e-07
gb|PNT28237.1| hypothetical protein POPTR_007G106700v3 [Populus ... 62 3e-07
ref|XP_002309909.2| DNA cross-link repair family protein [Populu... 62 3e-07
gb|PNT28236.1| hypothetical protein POPTR_007G106700v3 [Populus ... 62 3e-07
ref|XP_021728052.1| 5' exonuclease Apollo-like [Chenopodium quinoa] 62 3e-07
ref|XP_023897155.1| uncharacterized protein LOC112009036 isoform... 62 5e-07
ref|XP_011022950.1| PREDICTED: protein artemis isoform X2 [Popul... 62 5e-07
gb|POE70896.1| 5' exonuclease apollo [Quercus suber] 62 5e-07
>emb|CDP04690.1| unnamed protein product [Coffea canephora]
Length = 539
Score = 70.1 bits (170), Expect(2) = 2e-12
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = +2
Query: 167 VISRQKNKKTDEDIIEPKYKSAKIMTQTGKASSSPIGSSKRFSVNLRNLYRSMNASVPQR 346
V+ + K +E E K ++ + +AS SPIGSSK FS +LRN YRSMN SVPQ
Sbjct: 462 VVEVECRKSFEESREEEDRKISESTQRRKRASDSPIGSSKSFSQSLRNFYRSMNVSVPQP 521
Query: 347 LPSLVELMNSIKNAKRKY 400
LPSLVELM++ K ++R++
Sbjct: 522 LPSLVELMHANKCSRRRF 539
Score = 30.8 bits (68), Expect(2) = 2e-12
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 7 EQDNLDIVGRARSGLQDSALK-EKEFVAGDPLNSVYSRGDSYSSFVKVDIVEEGCDKS 177
++ ++ + G+ R+G+QDS K EKE V D + S +S +V++VE C KS
Sbjct: 416 KRPSVTLFGKPRAGIQDSIFKHEKETVTEDDSSQKTSED---TSLRQVEVVEVECRKS 470
>ref|XP_017257753.1| PREDICTED: uncharacterized protein LOC108227222 isoform X2 [Daucus
carota subsp. sativus]
Length = 482
Score = 74.7 bits (182), Expect = 2e-11
Identities = 41/77 (53%), Positives = 47/77 (61%)
Frame = +2
Query: 176 RQKNKKTDEDIIEPKYKSAKIMTQTGKASSSPIGSSKRFSVNLRNLYRSMNASVPQRLPS 355
+ K DII+ S MT + S SP GSSKRF NLR +YR M+ VPQ LPS
Sbjct: 405 KSPENKNVVDIIKTNNSSEVKMTLADETSFSPDGSSKRFCANLRKMYRKMHVPVPQPLPS 464
Query: 356 LVELMNSIKNAKRKYEF 406
LVELM S KNAKRK+ F
Sbjct: 465 LVELMKSRKNAKRKFTF 481
>ref|XP_017257752.1| PREDICTED: protein artemis isoform X1 [Daucus carota subsp.
sativus]
gb|KZM92192.1| hypothetical protein DCAR_020443 [Daucus carota subsp. sativus]
Length = 583
Score = 74.7 bits (182), Expect = 2e-11
Identities = 41/77 (53%), Positives = 47/77 (61%)
Frame = +2
Query: 176 RQKNKKTDEDIIEPKYKSAKIMTQTGKASSSPIGSSKRFSVNLRNLYRSMNASVPQRLPS 355
+ K DII+ S MT + S SP GSSKRF NLR +YR M+ VPQ LPS
Sbjct: 506 KSPENKNVVDIIKTNNSSEVKMTLADETSFSPDGSSKRFCANLRKMYRKMHVPVPQPLPS 565
Query: 356 LVELMNSIKNAKRKYEF 406
LVELM S KNAKRK+ F
Sbjct: 566 LVELMKSRKNAKRKFTF 582
>emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]
Length = 1066
Score = 65.9 bits (159), Expect(2) = 2e-10
Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Frame = +2
Query: 188 KKTDEDIIE-PKYKSAKIMTQTGK-ASSSPIGSSKRFSVNLRNLYRSMNASVPQRLPSLV 361
KK + D+ E P K + T+ K AS +PI S+ F+ +LRNLYRSMN SVPQ LPSLV
Sbjct: 992 KKIEVDVTEVPSEKLVEKETEVCKIASQAPIILSRGFNESLRNLYRSMNVSVPQPLPSLV 1051
Query: 362 ELMNSIKNAKR 394
ELMNS K AK+
Sbjct: 1052 ELMNSNKRAKK 1062
Score = 28.9 bits (63), Expect(2) = 2e-10
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 7 EQDNLDIVGRARSGLQDSALKEKE----FVAGDPLNSVYSRGDSYSSFVKVDIVEEGCDK 174
E+ L + G+AR G QDS + ++ + DP V +R ++ SS V++ C+
Sbjct: 932 ERPPLTLFGKARFGFQDSTFQHEQEKTMVMKSDPQQIVTNRAENESSSQDVEL---ECEN 988
Query: 175 SPKKQ 189
S +K+
Sbjct: 989 SLEKK 993
>ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
Length = 552
Score = 65.9 bits (159), Expect(2) = 2e-10
Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Frame = +2
Query: 188 KKTDEDIIE-PKYKSAKIMTQTGK-ASSSPIGSSKRFSVNLRNLYRSMNASVPQRLPSLV 361
KK + D+ E P K + T+ K AS +PI S+ F+ +LRNLYRSMN SVPQ LPSLV
Sbjct: 478 KKIEVDVTEVPSEKLVEKETEVCKIASQAPIILSRGFNESLRNLYRSMNVSVPQPLPSLV 537
Query: 362 ELMNSIKNAKR 394
ELMNS K AK+
Sbjct: 538 ELMNSNKRAKK 548
Score = 28.9 bits (63), Expect(2) = 2e-10
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 7 EQDNLDIVGRARSGLQDSALKEKE----FVAGDPLNSVYSRGDSYSSFVKVDIVEEGCDK 174
E+ L + G+AR G QDS + ++ + DP V +R ++ SS V++ C+
Sbjct: 418 ERPPLTLFGKARFGFQDSTFQHEQEKTMVMKSDPQQIVTNRAENESSSQDVEL---ECEN 474
Query: 175 SPKKQ 189
S +K+
Sbjct: 475 SLEKK 479
>emb|CBI37538.3| unnamed protein product, partial [Vitis vinifera]
Length = 558
Score = 67.0 bits (162), Expect = 8e-09
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = +2
Query: 179 QKNKKTDEDIIE-PKYKSAKIMTQTGK-ASSSPIGSSKRFSVNLRNLYRSMNASVPQRLP 352
Q+ KK + D+ E P K + T+ K AS +PI S+ F+ +LRNLYRSMN SVPQ LP
Sbjct: 450 QQIKKIEVDVTEVPSEKLVEKETEVCKIASQAPIILSRGFNESLRNLYRSMNVSVPQPLP 509
Query: 353 SLVELMNSIKNAKR 394
SLVELMNS K AK+
Sbjct: 510 SLVELMNSNKRAKK 523
>ref|XP_011464900.1| PREDICTED: protein artemis [Fragaria vesca subsp. vesca]
ref|XP_011464901.1| PREDICTED: protein artemis [Fragaria vesca subsp. vesca]
Length = 584
Score = 66.2 bits (160), Expect = 2e-08
Identities = 38/70 (54%), Positives = 45/70 (64%)
Frame = +2
Query: 197 DEDIIEPKYKSAKIMTQTGKASSSPIGSSKRFSVNLRNLYRSMNASVPQRLPSLVELMNS 376
D EP+ K I + K S S IGSSK F+ +R LYRSMN VPQ LPSLVELMN+
Sbjct: 512 DNQKYEPE-KKRPIELEARKVSCSLIGSSKCFNERVRKLYRSMNVPVPQPLPSLVELMNA 570
Query: 377 IKNAKRKYEF 406
K AKR+ +F
Sbjct: 571 RKRAKRRVDF 580
>ref|XP_021662155.1| 5' exonuclease Apollo-like isoform X1 [Hevea brasiliensis]
Length = 542
Score = 60.1 bits (144), Expect(2) = 6e-08
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +2
Query: 257 ASSSPIGSSKRFSVNLRNLYRSMNASVPQRLPSLVELMNSIKNAKRKYEF 406
AS S IGSS+ FS L+NLYRSMN VP+ LPSLVEL N+ K KR+ F
Sbjct: 488 ASYSSIGSSRNFSETLKNLYRSMNVPVPRPLPSLVELRNANKRNKRRLNF 537
Score = 25.8 bits (55), Expect(2) = 6e-08
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 10/66 (15%)
Frame = +1
Query: 25 IVGRARSGLQDSALKEKE---FVAGDPL-------NSVYSRGDSYSSFVKVDIVEEGCDK 174
+ GRAR G+QDS +E F+ P ++ + +++ + EE C +
Sbjct: 421 LFGRARLGIQDSNFPPEEKLAFINDQPAQEFAVEEDTAVKHENKSEKKLEICVTEEKCQE 480
Query: 175 SPKKQE 192
S KK +
Sbjct: 481 SVKKHK 486
>ref|XP_021662156.1| uncharacterized protein LOC110651203 isoform X2 [Hevea
brasiliensis]
Length = 441
Score = 60.1 bits (144), Expect(2) = 6e-08
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +2
Query: 257 ASSSPIGSSKRFSVNLRNLYRSMNASVPQRLPSLVELMNSIKNAKRKYEF 406
AS S IGSS+ FS L+NLYRSMN VP+ LPSLVEL N+ K KR+ F
Sbjct: 387 ASYSSIGSSRNFSETLKNLYRSMNVPVPRPLPSLVELRNANKRNKRRLNF 436
Score = 25.8 bits (55), Expect(2) = 6e-08
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 10/66 (15%)
Frame = +1
Query: 25 IVGRARSGLQDSALKEKE---FVAGDPL-------NSVYSRGDSYSSFVKVDIVEEGCDK 174
+ GRAR G+QDS +E F+ P ++ + +++ + EE C +
Sbjct: 320 LFGRARLGIQDSNFPPEEKLAFINDQPAQEFAVEEDTAVKHENKSEKKLEICVTEEKCQE 379
Query: 175 SPKKQE 192
S KK +
Sbjct: 380 SVKKHK 385
>ref|XP_024183096.1| uncharacterized protein LOC112188252 [Rosa chinensis]
gb|PRQ49341.1| putative metallo-beta-lactamase [Rosa chinensis]
Length = 584
Score = 63.2 bits (152), Expect = 2e-07
Identities = 34/61 (55%), Positives = 40/61 (65%)
Frame = +2
Query: 224 KSAKIMTQTGKASSSPIGSSKRFSVNLRNLYRSMNASVPQRLPSLVELMNSIKNAKRKYE 403
K I + S S IGSSK F+ R LYRSMN +VPQ LPSLVELMN+ K AKR+ +
Sbjct: 520 KKRLIEPEAQNVSCSLIGSSKCFNERFRKLYRSMNVAVPQPLPSLVELMNARKRAKRRVD 579
Query: 404 F 406
F
Sbjct: 580 F 580
>ref|XP_021899870.1| uncharacterized protein LOC110816133 isoform X3 [Carica papaya]
Length = 448
Score = 62.8 bits (151), Expect = 2e-07
Identities = 31/45 (68%), Positives = 35/45 (77%)
Frame = +2
Query: 272 IGSSKRFSVNLRNLYRSMNASVPQRLPSLVELMNSIKNAKRKYEF 406
IG SK F NLR LYRSMN VP+ LPSLVELMNS K ++RK+EF
Sbjct: 404 IGYSKGFGENLRKLYRSMNVPVPRPLPSLVELMNSSKRSRRKFEF 448
>ref|XP_021899869.1| uncharacterized protein LOC110816133 isoform X2 [Carica papaya]
Length = 472
Score = 62.8 bits (151), Expect = 2e-07
Identities = 31/45 (68%), Positives = 35/45 (77%)
Frame = +2
Query: 272 IGSSKRFSVNLRNLYRSMNASVPQRLPSLVELMNSIKNAKRKYEF 406
IG SK F NLR LYRSMN VP+ LPSLVELMNS K ++RK+EF
Sbjct: 428 IGYSKGFGENLRKLYRSMNVPVPRPLPSLVELMNSSKRSRRKFEF 472
>ref|XP_021899868.1| 5' exonuclease Apollo isoform X1 [Carica papaya]
Length = 549
Score = 62.8 bits (151), Expect = 2e-07
Identities = 31/45 (68%), Positives = 35/45 (77%)
Frame = +2
Query: 272 IGSSKRFSVNLRNLYRSMNASVPQRLPSLVELMNSIKNAKRKYEF 406
IG SK F NLR LYRSMN VP+ LPSLVELMNS K ++RK+EF
Sbjct: 505 IGYSKGFGENLRKLYRSMNVPVPRPLPSLVELMNSSKRSRRKFEF 549
>gb|PNT28237.1| hypothetical protein POPTR_007G106700v3 [Populus trichocarpa]
Length = 537
Score = 62.4 bits (150), Expect = 3e-07
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = +2
Query: 266 SPIGSSKRFSVNLRNLYRSMNASVPQRLPSLVELMNSIKNAKRKYE 403
SPIGSS+ FS LR LYRSMN VP+ LPSL ELMNS K KR++E
Sbjct: 491 SPIGSSQNFSETLRKLYRSMNVPVPRPLPSLSELMNSKKGTKRRFE 536
>ref|XP_002309909.2| DNA cross-link repair family protein [Populus trichocarpa]
Length = 537
Score = 62.4 bits (150), Expect = 3e-07
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = +2
Query: 266 SPIGSSKRFSVNLRNLYRSMNASVPQRLPSLVELMNSIKNAKRKYE 403
SPIGSS+ FS LR LYRSMN VP+ LPSL ELMNS K KR++E
Sbjct: 491 SPIGSSQNFSETLRKLYRSMNVPVPRPLPSLSELMNSKKGTKRRFE 536
>gb|PNT28236.1| hypothetical protein POPTR_007G106700v3 [Populus trichocarpa]
Length = 553
Score = 62.4 bits (150), Expect = 3e-07
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = +2
Query: 266 SPIGSSKRFSVNLRNLYRSMNASVPQRLPSLVELMNSIKNAKRKYE 403
SPIGSS+ FS LR LYRSMN VP+ LPSL ELMNS K KR++E
Sbjct: 507 SPIGSSQNFSETLRKLYRSMNVPVPRPLPSLSELMNSKKGTKRRFE 552
>ref|XP_021728052.1| 5' exonuclease Apollo-like [Chenopodium quinoa]
Length = 636
Score = 62.4 bits (150), Expect = 3e-07
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Frame = +2
Query: 179 QKNKKTDEDIIEPKYKS------AKIMTQTGKASSSPIGSSKRFSVNLRNLYRSMNASVP 340
+K + + ++++P KS AK+ AS S + SS +S N R LYRSMN VP
Sbjct: 557 EKPNENNREVVDPGTKSDMNRRDAKLCKS---ASYSYVQSSTGYSDNFRKLYRSMNVPVP 613
Query: 341 QRLPSLVELMNSIKNAKRKYEF 406
Q LPSLVELMNS K KR+ EF
Sbjct: 614 QPLPSLVELMNSCKRPKRQVEF 635
>ref|XP_023897155.1| uncharacterized protein LOC112009036 isoform X2 [Quercus suber]
Length = 445
Score = 61.6 bits (148), Expect = 5e-07
Identities = 36/76 (47%), Positives = 46/76 (60%)
Frame = +2
Query: 176 RQKNKKTDEDIIEPKYKSAKIMTQTGKASSSPIGSSKRFSVNLRNLYRSMNASVPQRLPS 355
+ ++K DI KS T+ ++S IGSSK +S LR YR+MN VPQ LPS
Sbjct: 369 KSESKTGIADIEVQCLKSVDKETEVLNSASLTIGSSKSYSERLRKFYRTMNVPVPQPLPS 428
Query: 356 LVELMNSIKNAKRKYE 403
LVELM + K AKRK+E
Sbjct: 429 LVELMKANKCAKRKFE 444
>ref|XP_011022950.1| PREDICTED: protein artemis isoform X2 [Populus euphratica]
ref|XP_011022951.1| PREDICTED: protein artemis isoform X2 [Populus euphratica]
Length = 448
Score = 61.6 bits (148), Expect = 5e-07
Identities = 35/72 (48%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +2
Query: 191 KTDEDIIEPKYKSAKIMTQTGKAS-SSPIGSSKRFSVNLRNLYRSMNASVPQRLPSLVEL 367
K + + K + + K S SPIGSS FS LR LYRSMN VP+ LPSL EL
Sbjct: 376 KCENKLDTTKLSGKSVKNEVLKVSVRSPIGSSLNFSETLRKLYRSMNVPVPRPLPSLSEL 435
Query: 368 MNSIKNAKRKYE 403
MNS K KR++E
Sbjct: 436 MNSKKGTKRRFE 447
>gb|POE70896.1| 5' exonuclease apollo [Quercus suber]
Length = 451
Score = 61.6 bits (148), Expect = 5e-07
Identities = 36/76 (47%), Positives = 46/76 (60%)
Frame = +2
Query: 176 RQKNKKTDEDIIEPKYKSAKIMTQTGKASSSPIGSSKRFSVNLRNLYRSMNASVPQRLPS 355
+ ++K DI KS T+ ++S IGSSK +S LR YR+MN VPQ LPS
Sbjct: 375 KSESKTGIADIEVQCLKSVDKETEVLNSASLTIGSSKSYSERLRKFYRTMNVPVPQPLPS 434
Query: 356 LVELMNSIKNAKRKYE 403
LVELM + K AKRK+E
Sbjct: 435 LVELMKANKCAKRKFE 450