BLASTX nr result

ID: Acanthopanax24_contig00016406 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00016406
         (397 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017227266.1| PREDICTED: uncharacterized protein LOC108203...    61   4e-08

>ref|XP_017227266.1| PREDICTED: uncharacterized protein LOC108203064 [Daucus carota
           subsp. sativus]
 gb|KZM81992.1| hypothetical protein DCAR_029605 [Daucus carota subsp. sativus]
          Length = 675

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
 Frame = -1

Query: 397 LVNNAIIXXXXXXXXXXXXXELRTLVLKDMKKKCIGRQSNPPLKHDPSPINK-KPDPEKP 221
           L NNAI+             +LR  VLK + KK   +QSNP  +  P+ + K K DPE+ 
Sbjct: 358 LFNNAIVFYPKSSPESTAAVDLRKFVLKGLNKKRGAKQSNPSPESGPTTLLKIKSDPERS 417

Query: 220 DSLLTKQKSSSTPLIVCRKRXXXXXXXXXSNKTE 119
           DSLL KQK+S+ P IVCRKR         SNK +
Sbjct: 418 DSLLAKQKNSA-PFIVCRKRSSITSKPSASNKPQ 450


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