BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00016363
         (1631 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018815545.1| PREDICTED: RNA pseudouridine synthase 3, mit...   731   0.0  
ref|XP_023878012.1| RNA pseudouridine synthase 3, mitochondrial ...   724   0.0  
gb|POE78893.1| rna pseudouridine synthase 3, mitochondrial [Quer...   724   0.0  
ref|XP_002267010.1| PREDICTED: RNA pseudouridine synthase 3, mit...   719   0.0  
ref|XP_021297053.1| RNA pseudouridine synthase 3, mitochondrial ...   713   0.0  
ref|XP_007023655.2| PREDICTED: RNA pseudouridine synthase 3, mit...   713   0.0  
gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ...   713   0.0  
emb|CBI18448.3| unnamed protein product, partial [Vitis vinifera]     712   0.0  
gb|PIN19345.1| RNA pseudouridylate synthase [Handroanthus impeti...   708   0.0  
ref|XP_021681635.1| RNA pseudouridine synthase 3, mitochondrial ...   707   0.0  
ref|XP_002526838.1| PREDICTED: RNA pseudouridine synthase 3, mit...   705   0.0  
ref|XP_017603724.1| PREDICTED: RNA pseudouridine synthase 3, mit...   705   0.0  
ref|XP_015579436.1| PREDICTED: RNA pseudouridine synthase 3, mit...   705   0.0  
ref|XP_022716399.1| RNA pseudouridine synthase 3, mitochondrial-...   704   0.0  
gb|PIN01127.1| RNA pseudouridylate synthase [Handroanthus impeti...   704   0.0  
ref|XP_016749758.1| PREDICTED: RNA pseudouridine synthase 3, mit...   704   0.0  
ref|XP_012444478.1| PREDICTED: RNA pseudouridine synthase 3, mit...   701   0.0  
gb|PPR84351.1| hypothetical protein GOBAR_AA36365 [Gossypium bar...   698   0.0  
ref|XP_011074171.1| RNA pseudouridine synthase 3, mitochondrial ...   693   0.0  
ref|XP_017215734.1| PREDICTED: RNA pseudouridine synthase 3, mit...   693   0.0  

>ref|XP_018815545.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1
            [Juglans regia]
          Length = 471

 Score =  731 bits (1887), Expect = 0.0
 Identities = 365/474 (77%), Positives = 402/474 (84%), Gaps = 10/474 (2%)
 Frame = -3

Query: 1539 MWKNIFHQYKLFTARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPPF 1360
            MWK IFH  +L   R YSR+SPPP A  E VIRVS+ NIA LG PK+GPKPRQLLSLPPF
Sbjct: 1    MWKAIFH--RLAIIRHYSRISPPPPAYAEPVIRVSN-NIAQLGGPKEGPKPRQLLSLPPF 57

Query: 1359 PDHPLPGKNLVSNT--HVTAISWMKYYFDEIPGSVIQTHFNKGLVHMD---DLDSNLTKE 1195
            P HPLP KN  S     VTAISW+KYYFDEIPGS I +HFNKGLV M+     DS++ +E
Sbjct: 58   PAHPLPVKNSASGHPGRVTAISWVKYYFDEIPGSAISSHFNKGLVQMECPCSEDSHVDEE 117

Query: 1194 GLTNPLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKY 1015
            G   P+RKIKHNEVM+ GARVY+PVSVAET ISKRFD+IPSGTL+PNADEI+YLQRLVKY
Sbjct: 118  GQMKPMRKIKHNEVMEAGARVYIPVSVAETMISKRFDAIPSGTLYPNADEIQYLQRLVKY 177

Query: 1014 KDSAIIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGR 835
            KD AIIVLNKPPKLPVKG+LPVHNSMD      LSYDYDEGPKLVHRLDRE SG+LLMGR
Sbjct: 178  KDYAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDREQSGLLLMGR 237

Query: 834  TKESISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLL 655
            TKES+  L WLFSDI K NSSC+AWNDA  ATY RYW LVIG+P+EKEG+I APL KVLL
Sbjct: 238  TKESVDHLQWLFSDINKANSSCKAWNDACEATYQRYWALVIGSPREKEGLICAPLTKVLL 297

Query: 654  NDGKTERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALG 475
            NDGKTERV+LAH SGLEA QEA+TE+RVLGP+INGCSWIELRP+TSRKHQ+RVHCAEALG
Sbjct: 298  NDGKTERVILAHQSGLEACQEAITEYRVLGPVINGCSWIELRPLTSRKHQLRVHCAEALG 357

Query: 474  TPIVGDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCR 295
            TPIVGDYKYGWFVH++WKQMPR D EPTTGK YK+RRPEGLDVQKGSVLSKVPLLHLHCR
Sbjct: 358  TPIVGDYKYGWFVHKRWKQMPRADIEPTTGKSYKLRRPEGLDVQKGSVLSKVPLLHLHCR 417

Query: 294  ELVLPNIAKFIGPYNKNIEH-----NSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            ELVLPNIAKF+   N+  E+     + +PDLLRFVASMPSHMKISWNLMSSYLV
Sbjct: 418  ELVLPNIAKFLPVLNQKSENLHPALSPRPDLLRFVASMPSHMKISWNLMSSYLV 471


>ref|XP_023878012.1| RNA pseudouridine synthase 3, mitochondrial isoform X1 [Quercus
            suber]
 ref|XP_023878013.1| RNA pseudouridine synthase 3, mitochondrial isoform X1 [Quercus
            suber]
          Length = 476

 Score =  724 bits (1869), Expect = 0.0
 Identities = 363/477 (76%), Positives = 407/477 (85%), Gaps = 13/477 (2%)
 Frame = -3

Query: 1539 MWKNIFHQYK-LFTARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPP 1363
            MWK IF++ + LF+ R YSR+SPP  A  + VIRVS+ NIA LG PK+GPKPRQLLSLPP
Sbjct: 1    MWKKIFNRQQILFSVRQYSRISPPQPAYADPVIRVSN-NIAQLGGPKEGPKPRQLLSLPP 59

Query: 1362 FPDHPLPGKNLVS----NTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMD---DLDSNL 1204
            FP HPLP KN  S    +T VTAISW+KYYFDEI  +VIQ+HF+KGLV ++     DS +
Sbjct: 60   FPAHPLPRKNSFSIPGQSTRVTAISWVKYYFDEISDTVIQSHFSKGLVQIECPISEDSYV 119

Query: 1203 TKEGLTNPLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRL 1024
             KEG   PLRKI+ NEVM+ GARVY+PVSVAETKISKRFD+IPSGTL+PNADEIEYLQRL
Sbjct: 120  DKEGHMKPLRKIRPNEVMEAGARVYIPVSVAETKISKRFDTIPSGTLYPNADEIEYLQRL 179

Query: 1023 VKYKDSAIIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILL 844
            VKYKDSAIIVLNKPP+LPVKG+LPVHNSMD      LSYDYDEGPKLVHRLDRESSG+LL
Sbjct: 180  VKYKDSAIIVLNKPPRLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLLL 239

Query: 843  MGRTKESISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAK 664
            MGRTKES+  L WLFSDI K N SCEAWND+  ATY RYW LVIG PK+KEG+I APL+K
Sbjct: 240  MGRTKESVDHLQWLFSDINKANFSCEAWNDSYEATYQRYWALVIGCPKQKEGLIRAPLSK 299

Query: 663  VLLNDGKTERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAE 484
            VLLNDGKTERV+LAH +GLEASQEA+TE+RVLGP INGCSWIEL P+TSRKHQ+RVHCAE
Sbjct: 300  VLLNDGKTERVILAHQTGLEASQEAITEYRVLGPKINGCSWIELHPLTSRKHQLRVHCAE 359

Query: 483  ALGTPIVGDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHL 304
            ALGTPIVGDYKYGWFVH++WKQMPRVD EPTTGKPY++RRPEGLDVQKGSVLSKVPLLHL
Sbjct: 360  ALGTPIVGDYKYGWFVHQRWKQMPRVDIEPTTGKPYRLRRPEGLDVQKGSVLSKVPLLHL 419

Query: 303  HCRELVLPNIAKFIGPYNKNIEH-----NSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            HCRELVLPNIAKF+   ++  E      +SKPDLLRFVASMP+HMKISWNLMSSYLV
Sbjct: 420  HCRELVLPNIAKFLQVLDQKSEKLHPALSSKPDLLRFVASMPNHMKISWNLMSSYLV 476


>gb|POE78893.1| rna pseudouridine synthase 3, mitochondrial [Quercus suber]
          Length = 498

 Score =  724 bits (1870), Expect = 0.0
 Identities = 363/478 (75%), Positives = 408/478 (85%), Gaps = 13/478 (2%)
 Frame = -3

Query: 1542 TMWKNIFHQYK-LFTARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLP 1366
            +MWK IF++ + LF+ R YSR+SPP  A  + VIRVS+ NIA LG PK+GPKPRQLLSLP
Sbjct: 22   SMWKKIFNRQQILFSVRQYSRISPPQPAYADPVIRVSN-NIAQLGGPKEGPKPRQLLSLP 80

Query: 1365 PFPDHPLPGKNLVS----NTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMD---DLDSN 1207
            PFP HPLP KN  S    +T VTAISW+KYYFDEI  +VIQ+HF+KGLV ++     DS 
Sbjct: 81   PFPAHPLPRKNSFSIPGQSTRVTAISWVKYYFDEISDTVIQSHFSKGLVQIECPISEDSY 140

Query: 1206 LTKEGLTNPLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQR 1027
            + KEG   PLRKI+ NEVM+ GARVY+PVSVAETKISKRFD+IPSGTL+PNADEIEYLQR
Sbjct: 141  VDKEGHMKPLRKIRPNEVMEAGARVYIPVSVAETKISKRFDTIPSGTLYPNADEIEYLQR 200

Query: 1026 LVKYKDSAIIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGIL 847
            LVKYKDSAIIVLNKPP+LPVKG+LPVHNSMD      LSYDYDEGPKLVHRLDRESSG+L
Sbjct: 201  LVKYKDSAIIVLNKPPRLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLL 260

Query: 846  LMGRTKESISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLA 667
            LMGRTKES+  L WLFSDI K N SCEAWND+  ATY RYW LVIG PK+KEG+I APL+
Sbjct: 261  LMGRTKESVDHLQWLFSDINKANFSCEAWNDSYEATYQRYWALVIGCPKQKEGLIRAPLS 320

Query: 666  KVLLNDGKTERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCA 487
            KVLLNDGKTERV+LAH +GLEASQEA+TE+RVLGP INGCSWIEL P+TSRKHQ+RVHCA
Sbjct: 321  KVLLNDGKTERVILAHQTGLEASQEAITEYRVLGPKINGCSWIELHPLTSRKHQLRVHCA 380

Query: 486  EALGTPIVGDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLH 307
            EALGTPIVGDYKYGWFVH++WKQMPRVD EPTTGKPY++RRPEGLDVQKGSVLSKVPLLH
Sbjct: 381  EALGTPIVGDYKYGWFVHQRWKQMPRVDIEPTTGKPYRLRRPEGLDVQKGSVLSKVPLLH 440

Query: 306  LHCRELVLPNIAKFIGPYNKNIEH-----NSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            LHCRELVLPNIAKF+   ++  E      +SKPDLLRFVASMP+HMKISWNLMSSYLV
Sbjct: 441  LHCRELVLPNIAKFLQVLDQKSEKLHPALSSKPDLLRFVASMPNHMKISWNLMSSYLV 498


>ref|XP_002267010.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Vitis
            vinifera]
          Length = 479

 Score =  719 bits (1856), Expect = 0.0
 Identities = 361/480 (75%), Positives = 409/480 (85%), Gaps = 16/480 (3%)
 Frame = -3

Query: 1539 MWKNIFHQYK-LF-TARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLP 1366
            MWKN+ H+ + LF   R YSR++PP  A    VIRVS+ N+A LG PK+GPKPRQLLSLP
Sbjct: 1    MWKNVLHECQGLFPVVRHYSRIAPPRPASAAPVIRVSN-NVAQLGSPKEGPKPRQLLSLP 59

Query: 1365 PFPDHPLPGKNLVS----NTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMDDL---DSN 1207
            PFP HPLPGK+LV+     THVTAISW+KYYFDEIPGSV+Q+HFNKGLVHM+     DS+
Sbjct: 60   PFPAHPLPGKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSS 119

Query: 1206 LTKEGLTNPLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQR 1027
            L KEG   PLRKIK NEVM+ G R+YVPVSVAE +ISKRFD+IPSGTLHPNADEIEYLQR
Sbjct: 120  LEKEGQIKPLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQR 179

Query: 1026 LVKYKDSAIIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGIL 847
            LV YKD AI+VLNKPPK+P+KG+LPVHNSMD      L++DY+EGPKLVHRLDRESSG+L
Sbjct: 180  LVTYKDPAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLL 239

Query: 846  LMGRTKESISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLA 667
            LMGRTKES++ LHWLFSDI K  S  +AW+DA  AT  RYW LVIG+PK+KEGVI APL+
Sbjct: 240  LMGRTKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLS 299

Query: 666  KVLLNDGKTERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCA 487
            KVLL+DGKTERV+LA+ SGLEASQEA+TE+RVLGPMINGCSWIEL P TSRKHQ+RVHCA
Sbjct: 300  KVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCA 359

Query: 486  EALGTPIVGDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLH 307
            EALGTPIVGDYKYGWFVHR+WKQMPRVD EPTTGKPYKMRRPEGLDVQKGSVLSKVPLLH
Sbjct: 360  EALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLH 419

Query: 306  LHCRELVLPNIAKFI-----GPYNKN--IEHNSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            LHCREL+LPNIAKF+      P N+N   + + KPD+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 420  LHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 479


>ref|XP_021297053.1| RNA pseudouridine synthase 3, mitochondrial [Herrania umbratica]
          Length = 471

 Score =  713 bits (1841), Expect = 0.0
 Identities = 352/472 (74%), Positives = 398/472 (84%), Gaps = 8/472 (1%)
 Frame = -3

Query: 1539 MWKNIFHQYKLFTARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPPF 1360
            M K+   ++ L   R YSRV+PPP A  + V+RVS+ N+A+LG PK GPKPRQLLSLPPF
Sbjct: 1    MQKSRLGRHFLSLVRHYSRVAPPPPAYADPVLRVSN-NVAYLGAPKQGPKPRQLLSLPPF 59

Query: 1359 PDHPLPGKNLVSNTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMDDL---DSNLTKEGL 1189
            P  PLPGKN      VTAISW+KYYFDEI  S IQ+HFNKGLV M+     D+ + ++GL
Sbjct: 60   PGSPLPGKNPGGTARVTAISWLKYYFDEILDSAIQSHFNKGLVQMESSNAGDTCIERDGL 119

Query: 1188 TNPLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKYKD 1009
              PLRKIKHNEVM+VGARV+VPVS+AET+ISKRFD IPSGTL+PN DEI+YLQRLVK+KD
Sbjct: 120  MKPLRKIKHNEVMEVGARVWVPVSIAETRISKRFDCIPSGTLYPNKDEIDYLQRLVKFKD 179

Query: 1008 SAIIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGRTK 829
             AI+VLNKPPKLPVKGSLPVHNSMD      LSYDYDEGPKLVHRLDRESSG+LLMGRTK
Sbjct: 180  YAILVLNKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTK 239

Query: 828  ESISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLLND 649
            ES++ LHWLF+D+    SSC+AWNDA  A Y R+W LVIG PKEKEG+I APL+K+LL+D
Sbjct: 240  ESVAHLHWLFNDLNTVKSSCKAWNDACDAKYQRFWALVIGTPKEKEGLICAPLSKILLDD 299

Query: 648  GKTERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALGTP 469
            GKTE ++LA   GLEASQEA+TE+RVLGPMINGCSWIELRP+TSRKHQ+RVHCAEALGTP
Sbjct: 300  GKTESIILAQNVGLEASQEAITEYRVLGPMINGCSWIELRPLTSRKHQLRVHCAEALGTP 359

Query: 468  IVGDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCREL 289
            IVGDYKYGWFVHR+WKQMPRVD EPTTGKPYK+RRPEGLDVQKGSVLSKVPLLHLHCREL
Sbjct: 360  IVGDYKYGWFVHRRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 419

Query: 288  VLPNIAKFIGPYNKNIEH-----NSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            VLPNIAKF+   NKN E      ++KPDLLRFVASMP HMKISWNLMSSYLV
Sbjct: 420  VLPNIAKFLPVLNKNTETLPPALSTKPDLLRFVASMPKHMKISWNLMSSYLV 471


>ref|XP_007023655.2| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Theobroma
            cacao]
          Length = 471

 Score =  713 bits (1841), Expect = 0.0
 Identities = 350/462 (75%), Positives = 393/462 (85%), Gaps = 8/462 (1%)
 Frame = -3

Query: 1509 LFTARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPPFPDHPLPGKNL 1330
            L   R YSRV+PPP A  + V+RVS+S +A+LG PK GPKPRQLLSLPPFP +PLPGKN 
Sbjct: 11   LSLVRHYSRVAPPPPAYADPVLRVSNS-VAYLGAPKQGPKPRQLLSLPPFPGYPLPGKNP 69

Query: 1329 VSNTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMDDL---DSNLTKEGLTNPLRKIKHN 1159
                 VTAISW+KYYFDEIP S IQ+HFNKGLV M+     D+ + ++GL  PLRKIKHN
Sbjct: 70   GGTARVTAISWLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCIERDGLMKPLRKIKHN 129

Query: 1158 EVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKYKDSAIIVLNKPP 979
            EVM+VG RV+VPVS+AET+ISKRFD IPSGTL+PN DEI+YLQRLVKYKD AI+VLNKPP
Sbjct: 130  EVMEVGTRVWVPVSIAETRISKRFDCIPSGTLYPNKDEIDYLQRLVKYKDYAILVLNKPP 189

Query: 978  KLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGRTKESISRLHWLF 799
            KLPVKGSLPVHNSMD      LSYD+DEGPKLVHRLDRESSG+LLMGRTKES++ LHWLF
Sbjct: 190  KLPVKGSLPVHNSMDALAAAALSYDHDEGPKLVHRLDRESSGLLLMGRTKESVAHLHWLF 249

Query: 798  SDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLLNDGKTERVMLAH 619
            +D+    SSC+AWNDA    Y R+W LVIG PKEKEG+I APL+K+LL+DGKTERV+LA 
Sbjct: 250  NDLNTVKSSCKAWNDACDVKYQRFWALVIGTPKEKEGLICAPLSKILLDDGKTERVILAQ 309

Query: 618  GSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALGTPIVGDYKYGWF 439
              GLEASQEA+TE+RVLGPMINGCSWIELRP+TSRKHQ+RVHCAEALGTPIVGDYKYGWF
Sbjct: 310  NVGLEASQEAITEYRVLGPMINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWF 369

Query: 438  VHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFIG 259
            VHR+WKQMPRVD EPTTGKPYK+RRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKF+ 
Sbjct: 370  VHRRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLP 429

Query: 258  PYNKNIEH-----NSKPDLLRFVASMPSHMKISWNLMSSYLV 148
              NKN E      + KPDLLRFVA+MP HMKISWNLMSSYLV
Sbjct: 430  VLNKNTETPPPALSMKPDLLRFVATMPKHMKISWNLMSSYLV 471


>gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 471

 Score =  713 bits (1841), Expect = 0.0
 Identities = 350/462 (75%), Positives = 393/462 (85%), Gaps = 8/462 (1%)
 Frame = -3

Query: 1509 LFTARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPPFPDHPLPGKNL 1330
            L   R YSRV+PPP A  + V+RVS+S +A+LG PK GPKPRQLLSLPPFP +PLPGKN 
Sbjct: 11   LSLVRHYSRVAPPPPAYADPVLRVSNS-VAYLGAPKQGPKPRQLLSLPPFPGYPLPGKNP 69

Query: 1329 VSNTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMDDL---DSNLTKEGLTNPLRKIKHN 1159
                 VTAISW+KYYFDEIP S IQ+HFNKGLV M+     D+ + ++GL  PLRKIKHN
Sbjct: 70   GGTARVTAISWLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCIERDGLMKPLRKIKHN 129

Query: 1158 EVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKYKDSAIIVLNKPP 979
            EVM+VG RV+VPVS+AET+ISKRFD IPSGTL+PN DEI+YLQRLVKYKD AI+VLNKPP
Sbjct: 130  EVMEVGTRVWVPVSIAETRISKRFDCIPSGTLYPNKDEIDYLQRLVKYKDYAILVLNKPP 189

Query: 978  KLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGRTKESISRLHWLF 799
            KLPVKGSLPVHNSMD      LSYD+DEGPKLVHRLDRESSG+LLMGRTKES++ LHWLF
Sbjct: 190  KLPVKGSLPVHNSMDALAAAALSYDHDEGPKLVHRLDRESSGLLLMGRTKESVAHLHWLF 249

Query: 798  SDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLLNDGKTERVMLAH 619
            +D+    SSC+AWNDA    Y R+W LVIG PKEKEG+I APL+K+LL+DGKTERV+LA 
Sbjct: 250  NDLNTVKSSCKAWNDACDVKYQRFWALVIGTPKEKEGLICAPLSKILLDDGKTERVILAQ 309

Query: 618  GSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALGTPIVGDYKYGWF 439
              GLEASQEA+TE+RVLGPMINGCSWIELRP+TSRKHQ+RVHCAEALGTPIVGDYKYGWF
Sbjct: 310  NVGLEASQEAITEYRVLGPMINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWF 369

Query: 438  VHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFIG 259
            VHR+WKQMPRVD EPTTGKPYK+RRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKF+ 
Sbjct: 370  VHRRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLP 429

Query: 258  PYNKNIEH-----NSKPDLLRFVASMPSHMKISWNLMSSYLV 148
              NKN E      + KPDLLRFVA+MP HMKISWNLMSSYLV
Sbjct: 430  VLNKNTETLPPALSMKPDLLRFVATMPKHMKISWNLMSSYLV 471


>emb|CBI18448.3| unnamed protein product, partial [Vitis vinifera]
          Length = 481

 Score =  712 bits (1838), Expect = 0.0
 Identities = 359/482 (74%), Positives = 410/482 (85%), Gaps = 18/482 (3%)
 Frame = -3

Query: 1539 MWKNIFHQYK-LF-TARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLP 1366
            MWKN+ H+ + LF   R YSR++PP  A    VIRVS+ N+A LG PK+GPKPRQLLSLP
Sbjct: 1    MWKNVLHECQGLFPVVRHYSRIAPPRPASAAPVIRVSN-NVAQLGSPKEGPKPRQLLSLP 59

Query: 1365 PFPDHPLPGKNLVS----NTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMDDL---DSN 1207
            PFP HPLPGK+LV+     THVTAISW+KYYFDEIPGSV+Q+HFNKGLVHM+     DS+
Sbjct: 60   PFPAHPLPGKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSS 119

Query: 1206 LTKEGLTNPLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQR 1027
            L KEG   PLRKIK NEVM+ G R+YVPVSVAE +ISKRFD+IPSGTLHPNADEIEYLQR
Sbjct: 120  LEKEGQIKPLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQR 179

Query: 1026 L--VKYKDSAIIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSG 853
            L  +K++D AI+VLNKPPK+P+KG+LPVHNSMD      L++DY+EGPKLVHRLDRESSG
Sbjct: 180  LWLLKFQDPAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSG 239

Query: 852  ILLMGRTKESISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAP 673
            +LLMGRTKES++ LHWLFSDI K  S  +AW+DA  AT  RYW LVIG+PK+KEGVI AP
Sbjct: 240  LLLMGRTKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAP 299

Query: 672  LAKVLLNDGKTERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVH 493
            L+KVLL+DGKTERV+LA+ SGLEASQEA+TE+RVLGPMINGCSWIEL P TSRKHQ+RVH
Sbjct: 300  LSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVH 359

Query: 492  CAEALGTPIVGDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPL 313
            CAEALGTPIVGDYKYGWFVHR+WKQMPRVD EPTTGKPYKMRRPEGLDVQKGSVLSKVPL
Sbjct: 360  CAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPL 419

Query: 312  LHLHCRELVLPNIAKFI-----GPYNKN--IEHNSKPDLLRFVASMPSHMKISWNLMSSY 154
            LHLHCREL+LPNIAKF+      P N+N   + + KPD+LRFVASMP+HMKISWNLMSSY
Sbjct: 420  LHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSY 479

Query: 153  LV 148
            LV
Sbjct: 480  LV 481


>gb|PIN19345.1| RNA pseudouridylate synthase [Handroanthus impetiginosus]
          Length = 465

 Score =  708 bits (1828), Expect = 0.0
 Identities = 354/469 (75%), Positives = 393/469 (83%), Gaps = 5/469 (1%)
 Frame = -3

Query: 1539 MWKNIFHQYKLFTARFY--SRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLP 1366
            M    F+Q  L   R Y  S++ PPP A   +VIRV++ NIAHLG PK GPKPRQLLSLP
Sbjct: 1    MRNKFFNQKALAAVRCYPRSKIRPPPPASAPAVIRVTN-NIAHLGRPKGGPKPRQLLSLP 59

Query: 1365 PFPDHPLPGKNLVSNTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMDDLDSNLTKE--- 1195
            PFP HPLPG+   S  HVTAISW+KYYFD+IP  VIQ HFNKGLV M+ L+S+       
Sbjct: 60   PFPGHPLPGRKSTSAAHVTAISWLKYYFDDIPPPVIQNHFNKGLVQMECLNSSAMSGYYI 119

Query: 1194 GLTNPLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKY 1015
            G T  +RKIKH+++M+ GARVYVPVSVAE+KISKRFD IPSGTL+PNADEIEYLQRLVKY
Sbjct: 120  GQTVSMRKIKHSDIMEFGARVYVPVSVAESKISKRFDVIPSGTLNPNADEIEYLQRLVKY 179

Query: 1014 KDSAIIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGR 835
            KDSAI++LNKPPKLPVKG+L VHNSMD      LSYDYD GPKLVHRLDRESSG+LLMGR
Sbjct: 180  KDSAILLLNKPPKLPVKGNLSVHNSMDALAAAALSYDYDGGPKLVHRLDRESSGLLLMGR 239

Query: 834  TKESISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLL 655
            TKESIS L WLFSD+TK  SS + WNDA  ATY RYW LVIG P+EKEG+I +PL KVLL
Sbjct: 240  TKESISYLQWLFSDMTKAKSSSKDWNDACEATYQRYWALVIGCPREKEGLICSPLTKVLL 299

Query: 654  NDGKTERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALG 475
            NDGKTERV++AH SGLEASQEA+TE+RVLGPMINGCSWIEL P T RKHQ+RVHCAEALG
Sbjct: 300  NDGKTERVIVAHNSGLEASQEAITEYRVLGPMINGCSWIELHPHTRRKHQLRVHCAEALG 359

Query: 474  TPIVGDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCR 295
            TPIVGDYKYGWFVH +WKQMPRVDFEP+TG+PYK+RRPEGLDVQKGSVLSKVPLLHLHCR
Sbjct: 360  TPIVGDYKYGWFVHSRWKQMPRVDFEPSTGEPYKLRRPEGLDVQKGSVLSKVPLLHLHCR 419

Query: 294  ELVLPNIAKFIGPYNKNIEHNSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            E+VLPNIAKFI     N EHNSKPD+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 420  EMVLPNIAKFI---EANPEHNSKPDILRFVAPMPSHMKISWNLMSSYLV 465


>ref|XP_021681635.1| RNA pseudouridine synthase 3, mitochondrial isoform X1 [Hevea
            brasiliensis]
 ref|XP_021681636.1| RNA pseudouridine synthase 3, mitochondrial isoform X1 [Hevea
            brasiliensis]
          Length = 468

 Score =  707 bits (1824), Expect = 0.0
 Identities = 350/470 (74%), Positives = 397/470 (84%), Gaps = 6/470 (1%)
 Frame = -3

Query: 1539 MWKNIFHQYKLFTARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPPF 1360
            MWKN+  +  L   R YSR+ PPP A  + VIRVS+ NIAHLG PKD PKPRQLLSLPPF
Sbjct: 1    MWKNVHFKQLLSKVRSYSRIVPPPAAYVKPVIRVSN-NIAHLGSPKDSPKPRQLLSLPPF 59

Query: 1359 PDHPLPGKNLVSNTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMD-DLDSNLTKEGLTN 1183
            P  PLPGKNLV++ HVTAISW+KYYF+EIP S IQ+HFNKGLV M+    SN  K+G   
Sbjct: 60   PHLPLPGKNLVTS-HVTAISWLKYYFNEIPDSAIQSHFNKGLVQMECPSGSNSIKQGGPT 118

Query: 1182 PLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKYKDSA 1003
             +RKIK N++M+ GAR+++PVSVAET+ISKRF  IPSGTL+PNADEIEYLQRLV+YKDSA
Sbjct: 119  SMRKIKPNDIMEEGARIHIPVSVAETRISKRFGIIPSGTLYPNADEIEYLQRLVEYKDSA 178

Query: 1002 IIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGRTKES 823
            I+VLNKPPKLPVKG+LPVHNSMD      LSYDYDEGPKLVHRLD ESSG++L+GRTKES
Sbjct: 179  IVVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDTESSGLILLGRTKES 238

Query: 822  ISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLLNDGK 643
            I  LHWLF+D+ K NS C+AWNDA  A Y RYW LVIG P EKEG+I APL KVLLNDGK
Sbjct: 239  IGLLHWLFNDLNKPNSWCKAWNDACEAMYQRYWALVIGTPTEKEGLIQAPLTKVLLNDGK 298

Query: 642  TERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALGTPIV 463
            T+RV+LA  SGLEASQEA+TE+RVLGP+INGCSWIELRP+TSRKHQ+RVHCAEALGTPIV
Sbjct: 299  TDRVVLAQHSGLEASQEALTEYRVLGPIINGCSWIELRPLTSRKHQLRVHCAEALGTPIV 358

Query: 462  GDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVL 283
            GDYKYGWFVH++WKQMPRVD EP +GKPYK+RRPEGLDVQKGSVLSKVPLLHLHCRELVL
Sbjct: 359  GDYKYGWFVHQRWKQMPRVDIEPFSGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVL 418

Query: 282  PNIAKFIGPYNKNIEH-----NSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            PNIAKF+   N+  E      ++KPDLLRFV SMP+HMKISWNLMSSYLV
Sbjct: 419  PNIAKFVDVLNQKSESLCLPVDAKPDLLRFVGSMPNHMKISWNLMSSYLV 468


>ref|XP_002526838.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X2
            [Ricinus communis]
 ref|XP_015579438.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X2
            [Ricinus communis]
 gb|EEF35573.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
          Length = 468

 Score =  705 bits (1819), Expect = 0.0
 Identities = 350/470 (74%), Positives = 401/470 (85%), Gaps = 6/470 (1%)
 Frame = -3

Query: 1539 MWKNIFHQYKLFTARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPPF 1360
            MWKNI+ +  +   R YSR++PPP A    VIRVS+ N+AHLG PKDGPKPRQLLSLPPF
Sbjct: 1    MWKNIYCRRVVSQGRSYSRIAPPPPAYANPVIRVSN-NVAHLGSPKDGPKPRQLLSLPPF 59

Query: 1359 PDHPLPGKNLVSNTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMDDLDSNLTKE-GLTN 1183
            P  PLPG+N +++ HVTAISW+KYYFDEI  S IQ+HFNKGL H++  + + + E G   
Sbjct: 60   PGLPLPGRNSMAS-HVTAISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSGSIEYGGQM 118

Query: 1182 PLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKYKDSA 1003
             LRKIKHN++M+ GARV+V VSVAET+ISKRFD+IPSGTL+PNADEI+YLQRLVKYKDSA
Sbjct: 119  SLRKIKHNDIMEAGARVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSA 178

Query: 1002 IIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGRTKES 823
            IIVLNKPP+LPVKG+LP+HNSMD      LSYDYDEGPKLV RLDRESSG+LLMGRTKES
Sbjct: 179  IIVLNKPPRLPVKGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLLMGRTKES 238

Query: 822  ISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLLNDGK 643
            I  L WLFSD+ K NS C+AWNDA +ATY RYW LVIG+PKEKEG+I APL+KVLLNDGK
Sbjct: 239  IDHLQWLFSDVNKSNSRCKAWNDACKATYQRYWALVIGSPKEKEGLIRAPLSKVLLNDGK 298

Query: 642  TERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALGTPIV 463
            TERV+LA  SGLEASQEA+TE+RVLGP INGCSWIELRP+TSRKHQ+RVHCAEALGTPIV
Sbjct: 299  TERVVLAQHSGLEASQEALTEYRVLGPRINGCSWIELRPLTSRKHQLRVHCAEALGTPIV 358

Query: 462  GDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVL 283
            GDYKYGW VH++WKQMPRVD EP +GKPYK+RRP GLDVQKGSVLSKVPLLHLHCRE VL
Sbjct: 359  GDYKYGWCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDVQKGSVLSKVPLLHLHCREFVL 418

Query: 282  PNIAKFIGPYNKNIEH-----NSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            PNIAKF+   N+  E+     ++KPDLLRFVASMP+HMKISWNLMSSYLV
Sbjct: 419  PNIAKFLAVLNEKSENIHPALDAKPDLLRFVASMPTHMKISWNLMSSYLV 468


>ref|XP_017603724.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Gossypium
            arboreum]
          Length = 472

 Score =  705 bits (1819), Expect = 0.0
 Identities = 350/474 (73%), Positives = 395/474 (83%), Gaps = 10/474 (2%)
 Frame = -3

Query: 1539 MWKNIFHQYKLFTARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPPF 1360
            M KN    + L  AR+YSRV+PPP A  + VIRVS+ N+A+LG PK GPKPRQLLSLPPF
Sbjct: 1    MQKNKLGHHLLSLARYYSRVAPPPPAYADPVIRVSN-NVAYLGSPKQGPKPRQLLSLPPF 59

Query: 1359 PDHPLPGKNLVSNTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMDDLDSN-----LTKE 1195
            P H LPGKN  +   VTAISW+KYYFDEI  S IQ+HFNKGLV ++  + N     + ++
Sbjct: 60   PGHHLPGKNSATG-RVTAISWLKYYFDEISDSAIQSHFNKGLVKIESSNPNAAYSFIERD 118

Query: 1194 GLTNPLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKY 1015
            G    LRKIKHNEVM+VGARV+VPVS+AET++S+RFD IPSGTLHPNADEI+YL+RLVKY
Sbjct: 119  GQMKSLRKIKHNEVMEVGARVWVPVSIAETRVSRRFDCIPSGTLHPNADEIDYLRRLVKY 178

Query: 1014 KDSAIIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGR 835
            KD AI+VLNKPPKLPVKGSLPVHNSMD      LSYDYDEGPKLVHRLDRESSG+LL+GR
Sbjct: 179  KDYAILVLNKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLLLLGR 238

Query: 834  TKESISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLL 655
            TKESIS LHWLF+DI    SSC+AWNDA  A + R+W LVIG PKE EG+I +PL+K+LL
Sbjct: 239  TKESISHLHWLFNDINPAKSSCKAWNDACDAKFQRFWALVIGTPKENEGLIRSPLSKILL 298

Query: 654  NDGKTERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALG 475
            +DGKTERV+LA   GLE SQEAVTE+RVLGPMINGCSW+ELRP+TSRKHQ+RVHCAEALG
Sbjct: 299  DDGKTERVILAQNVGLEPSQEAVTEYRVLGPMINGCSWVELRPLTSRKHQLRVHCAEALG 358

Query: 474  TPIVGDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCR 295
            TPIVGDYKYGWFVHRKWKQMPRVD EP TGKPYK+RRPEGLDVQKGSVLSKVPLLHLHCR
Sbjct: 359  TPIVGDYKYGWFVHRKWKQMPRVDIEPRTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCR 418

Query: 294  ELVLPNIAKFIGPYNKNIEH-----NSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            ELVLPNIAKF+   + N E      + KPDLLRFVASMP HMKISWNLMSSYLV
Sbjct: 419  ELVLPNIAKFLPLLSNNAETLSPGLSGKPDLLRFVASMPKHMKISWNLMSSYLV 472


>ref|XP_015579436.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1
            [Ricinus communis]
 ref|XP_015579437.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1
            [Ricinus communis]
          Length = 475

 Score =  705 bits (1819), Expect = 0.0
 Identities = 350/470 (74%), Positives = 401/470 (85%), Gaps = 6/470 (1%)
 Frame = -3

Query: 1539 MWKNIFHQYKLFTARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPPF 1360
            MWKNI+ +  +   R YSR++PPP A    VIRVS+ N+AHLG PKDGPKPRQLLSLPPF
Sbjct: 8    MWKNIYCRRVVSQGRSYSRIAPPPPAYANPVIRVSN-NVAHLGSPKDGPKPRQLLSLPPF 66

Query: 1359 PDHPLPGKNLVSNTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMDDLDSNLTKE-GLTN 1183
            P  PLPG+N +++ HVTAISW+KYYFDEI  S IQ+HFNKGL H++  + + + E G   
Sbjct: 67   PGLPLPGRNSMAS-HVTAISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSGSIEYGGQM 125

Query: 1182 PLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKYKDSA 1003
             LRKIKHN++M+ GARV+V VSVAET+ISKRFD+IPSGTL+PNADEI+YLQRLVKYKDSA
Sbjct: 126  SLRKIKHNDIMEAGARVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSA 185

Query: 1002 IIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGRTKES 823
            IIVLNKPP+LPVKG+LP+HNSMD      LSYDYDEGPKLV RLDRESSG+LLMGRTKES
Sbjct: 186  IIVLNKPPRLPVKGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLLMGRTKES 245

Query: 822  ISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLLNDGK 643
            I  L WLFSD+ K NS C+AWNDA +ATY RYW LVIG+PKEKEG+I APL+KVLLNDGK
Sbjct: 246  IDHLQWLFSDVNKSNSRCKAWNDACKATYQRYWALVIGSPKEKEGLIRAPLSKVLLNDGK 305

Query: 642  TERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALGTPIV 463
            TERV+LA  SGLEASQEA+TE+RVLGP INGCSWIELRP+TSRKHQ+RVHCAEALGTPIV
Sbjct: 306  TERVVLAQHSGLEASQEALTEYRVLGPRINGCSWIELRPLTSRKHQLRVHCAEALGTPIV 365

Query: 462  GDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVL 283
            GDYKYGW VH++WKQMPRVD EP +GKPYK+RRP GLDVQKGSVLSKVPLLHLHCRE VL
Sbjct: 366  GDYKYGWCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDVQKGSVLSKVPLLHLHCREFVL 425

Query: 282  PNIAKFIGPYNKNIEH-----NSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            PNIAKF+   N+  E+     ++KPDLLRFVASMP+HMKISWNLMSSYLV
Sbjct: 426  PNIAKFLAVLNEKSENIHPALDAKPDLLRFVASMPTHMKISWNLMSSYLV 475


>ref|XP_022716399.1| RNA pseudouridine synthase 3, mitochondrial-like isoform X1 [Durio
            zibethinus]
          Length = 472

 Score =  704 bits (1818), Expect = 0.0
 Identities = 349/474 (73%), Positives = 393/474 (82%), Gaps = 10/474 (2%)
 Frame = -3

Query: 1539 MWKNIFHQYKLFTARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPPF 1360
            M KN      L   R YSRV+PPP    + +IRVS+ N+A+LG PK G KPRQLLSLPPF
Sbjct: 1    MQKNKLSHRLLSLVRHYSRVAPPPPVYADPIIRVSN-NVAYLGSPKQGSKPRQLLSLPPF 59

Query: 1359 PDHPLPGKNLVSNTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMDDL-----DSNLTKE 1195
            P +PLPGKN  S  HVTAISW+KYYFDEIP S IQ+HFN+GLV M+       DS + + 
Sbjct: 60   PGYPLPGKN-TSTGHVTAISWLKYYFDEIPDSAIQSHFNRGLVQMESSNPNADDSFIKRV 118

Query: 1194 GLTNPLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKY 1015
            G   PLRK+KHNEVM+VGARV+VPVS+AET++SKRFD IPSGTL+PNADEIEYLQRLVKY
Sbjct: 119  GQMKPLRKVKHNEVMEVGARVWVPVSIAETRVSKRFDCIPSGTLYPNADEIEYLQRLVKY 178

Query: 1014 KDSAIIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGR 835
            KD AI+VLNKPPKLPVKGS+PVHNSMD      LSYDYDEGPKLVHRLDRESSG+LLMGR
Sbjct: 179  KDYAILVLNKPPKLPVKGSMPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLLLMGR 238

Query: 834  TKESISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLL 655
            TKESI+ LHWLF+D+    SSC+AWNDA  A + R+W LVIG PKE EG+I APL+++LL
Sbjct: 239  TKESINHLHWLFNDLNTAKSSCKAWNDACDAKFQRFWALVIGTPKENEGLICAPLSRILL 298

Query: 654  NDGKTERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALG 475
            +DGKTERV+LA   GLE SQEA+TE+RVLGP INGCSWIELRP+TSRKHQ+RVHCAEALG
Sbjct: 299  DDGKTERVILAQNVGLEPSQEAMTEYRVLGPTINGCSWIELRPLTSRKHQLRVHCAEALG 358

Query: 474  TPIVGDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCR 295
            TPIVGDYKYGWFVHRKWKQMPRVD EP TG+PYK+RRPEGLDVQKGSVLSKVPLLHLHCR
Sbjct: 359  TPIVGDYKYGWFVHRKWKQMPRVDIEPMTGEPYKLRRPEGLDVQKGSVLSKVPLLHLHCR 418

Query: 294  ELVLPNIAKFIGPYNKNIEH-----NSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            ELVLPNIAKF+   NK  E      ++KPDLLRFVASMP HMKISWNLMSSYLV
Sbjct: 419  ELVLPNIAKFLPVLNKKTETLPPALSAKPDLLRFVASMPKHMKISWNLMSSYLV 472


>gb|PIN01127.1| RNA pseudouridylate synthase [Handroanthus impetiginosus]
          Length = 465

 Score =  704 bits (1816), Expect = 0.0
 Identities = 348/450 (77%), Positives = 387/450 (86%), Gaps = 3/450 (0%)
 Frame = -3

Query: 1488 SRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPPFPDHPLPGKNLVSNTHVT 1309
            S++ PPP A   +VIRV++ NIAHLG PK+GPKPRQLLSLPPFP HPL G+   S  HVT
Sbjct: 20   SKIRPPPPASAPAVIRVTN-NIAHLGRPKEGPKPRQLLSLPPFPGHPLLGRKSTSAAHVT 78

Query: 1308 AISWMKYYFDEIPGSVIQTHFNKGLVHMDDLDSNLTKE---GLTNPLRKIKHNEVMKVGA 1138
            A+SW+KYYFD+IP  VIQ HFNKGLV M+ L S+ T     G T  +RKIKH+++M+VGA
Sbjct: 79   AVSWLKYYFDDIPPPVIQNHFNKGLVQMECLGSSTTSGYYIGQTVSMRKIKHSDIMEVGA 138

Query: 1137 RVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKYKDSAIIVLNKPPKLPVKGS 958
            RVYVPVS+AE+KISKRFD IPSGTL+PNADEIEYL+RLVKYKDSAI+VLNKPPKLPVKG+
Sbjct: 139  RVYVPVSIAESKISKRFDVIPSGTLYPNADEIEYLRRLVKYKDSAILVLNKPPKLPVKGN 198

Query: 957  LPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGRTKESISRLHWLFSDITKGN 778
            L VHNSMD      LSYDYDEGPKLVHRLDR+SSG+LLMGRTKESIS L WLFSD+TK  
Sbjct: 199  LSVHNSMDALAAAALSYDYDEGPKLVHRLDRDSSGLLLMGRTKESISYLQWLFSDVTKAK 258

Query: 777  SSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLLNDGKTERVMLAHGSGLEAS 598
            S  + WN A  A Y RYW LVIG PKEKEG+I APL KVLLNDGKTERV+LAH SGLEAS
Sbjct: 259  SLSKDWNAACGAMYQRYWALVIGCPKEKEGLICAPLTKVLLNDGKTERVILAHNSGLEAS 318

Query: 597  QEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALGTPIVGDYKYGWFVHRKWKQ 418
            QEA+TE+RVLGPMINGCSWIELRP TSRKHQ+RVHCAEALGTPIVGDYKYGWFVH +WKQ
Sbjct: 319  QEAITEYRVLGPMINGCSWIELRPHTSRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQ 378

Query: 417  MPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFIGPYNKNIE 238
            MPRVDFEP+TG+PYK+RRPEGLDVQKGSVLSKVPLLHLHCRE+VLPNIAKFI     N E
Sbjct: 379  MPRVDFEPSTGEPYKLRRPEGLDVQKGSVLSKVPLLHLHCREIVLPNIAKFI---EANPE 435

Query: 237  HNSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            H+SKPD+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 436  HDSKPDILRFVAPMPSHMKISWNLMSSYLV 465


>ref|XP_016749758.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like
            [Gossypium hirsutum]
          Length = 472

 Score =  704 bits (1816), Expect = 0.0
 Identities = 350/474 (73%), Positives = 394/474 (83%), Gaps = 10/474 (2%)
 Frame = -3

Query: 1539 MWKNIFHQYKLFTARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPPF 1360
            M KN    + L  AR+YSRV+PPP A  + VIRVS+ N+A+LG PK GPKPRQLLSLPPF
Sbjct: 1    MQKNKLGHHLLSLARYYSRVAPPPPAYADPVIRVSN-NVAYLGSPKQGPKPRQLLSLPPF 59

Query: 1359 PDHPLPGKNLVSNTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMDD-----LDSNLTKE 1195
            P H LPGKN  +   VTAISW+KYYFDEI  S IQ+HFN GLV ++       DS + ++
Sbjct: 60   PGHHLPGKNSATG-RVTAISWLKYYFDEISDSAIQSHFNNGLVKIESSNPNAADSFIERD 118

Query: 1194 GLTNPLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKY 1015
            G    LRKIKHNEVM+VGARV+VPVS+AET++S+RFD IPSGTLHPNADEI+YL+RLVKY
Sbjct: 119  GQMKSLRKIKHNEVMEVGARVWVPVSIAETRVSRRFDCIPSGTLHPNADEIDYLRRLVKY 178

Query: 1014 KDSAIIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGR 835
            KD AI+VLNKPPKLPVKGSLPVHNSMD      LSYDYDEGPKLVHRLDRESSG+LLMGR
Sbjct: 179  KDYAILVLNKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLLLMGR 238

Query: 834  TKESISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLL 655
            TKESIS LHWLF+DI    SSC+AWNDA  A + RYW LVIG PKE EG+I +PL+K+LL
Sbjct: 239  TKESISHLHWLFNDINPAKSSCKAWNDACDAKFQRYWALVIGTPKENEGLIRSPLSKILL 298

Query: 654  NDGKTERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALG 475
            +DGKTERV+LA   GLE SQEAVTE+RVLGPMINGCSW+ELRP+TSRKHQ+RVHCAEALG
Sbjct: 299  DDGKTERVILAQNVGLEPSQEAVTEYRVLGPMINGCSWVELRPLTSRKHQLRVHCAEALG 358

Query: 474  TPIVGDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCR 295
            TPIVGDYKYGWFVHR+WKQMPRVD EP TGKPYK+RRPEGLDVQKGSVLSKVPL+HLHCR
Sbjct: 359  TPIVGDYKYGWFVHRQWKQMPRVDIEPRTGKPYKLRRPEGLDVQKGSVLSKVPLVHLHCR 418

Query: 294  ELVLPNIAKFIGPYNKNIEH-----NSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            ELVLPNIAKF+   + N E      + KPDLLRFVASMP HMKISWNLMSSYLV
Sbjct: 419  ELVLPNIAKFLPLLSNNAETLSPGLSGKPDLLRFVASMPKHMKISWNLMSSYLV 472


>ref|XP_012444478.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Gossypium
            raimondii]
 ref|XP_012444479.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Gossypium
            raimondii]
 gb|KJB56428.1| hypothetical protein B456_009G119600 [Gossypium raimondii]
          Length = 472

 Score =  701 bits (1808), Expect = 0.0
 Identities = 351/474 (74%), Positives = 392/474 (82%), Gaps = 10/474 (2%)
 Frame = -3

Query: 1539 MWKNIFHQYKLFTARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPPF 1360
            M KN    + L  AR YSRV+PPP A  + VIRVS+ N+A+LG PK GPKPRQLLSLPPF
Sbjct: 1    MQKNRLGHHLLSLARHYSRVAPPPPAYADPVIRVSN-NVAYLGSPKQGPKPRQLLSLPPF 59

Query: 1359 PDHPLPGKNLVSNTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMDD-----LDSNLTKE 1195
            P H LPGKN  +   VTAISW+KYYFDEI  S IQ+HFNKGLV ++       DS + ++
Sbjct: 60   PGHHLPGKNSATG-RVTAISWLKYYFDEISDSAIQSHFNKGLVEIESSNPNAADSFIERD 118

Query: 1194 GLTNPLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKY 1015
            G    LRKIKHNEVM+VGARV+VPVS+AET++SKRFD IPSGTLHPNADEI+YL+RLVKY
Sbjct: 119  GQMKSLRKIKHNEVMEVGARVWVPVSIAETRVSKRFDCIPSGTLHPNADEIDYLRRLVKY 178

Query: 1014 KDSAIIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGR 835
            KD AI+VLNKPPKLPVKGSLPVHNSMD      LSY YDEGPKLVHRLDRESSG+LLMGR
Sbjct: 179  KDYAILVLNKPPKLPVKGSLPVHNSMDALAAAALSYYYDEGPKLVHRLDRESSGLLLMGR 238

Query: 834  TKESISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLL 655
            TKESI+ LHWLF+DI    SSC+AWNDA  A + RYW LVIG PKE EG+I +PL+K+LL
Sbjct: 239  TKESINHLHWLFNDINPAKSSCKAWNDACDAKFQRYWALVIGTPKENEGLIRSPLSKILL 298

Query: 654  NDGKTERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALG 475
            +DGKTERV+LA   GLE SQEAVTE+RVLGPMINGCSW+ELRP+TSRKHQ+RVHCAEALG
Sbjct: 299  DDGKTERVILAQNVGLEPSQEAVTEYRVLGPMINGCSWVELRPLTSRKHQLRVHCAEALG 358

Query: 474  TPIVGDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCR 295
            TPIVGDYKYGWFVHRKWKQMPRVD E  TGKPYK+RRPEGLDVQKGSVLSKVPLLHLHCR
Sbjct: 359  TPIVGDYKYGWFVHRKWKQMPRVDIEQRTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCR 418

Query: 294  ELVLPNIAKFIGPYNKNIEH-----NSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            ELVLPNIAKF+   + N E      + KPDLLRFVASMP HMKISWNLMSSYLV
Sbjct: 419  ELVLPNIAKFLPLLSNNAETLSPGLSGKPDLLRFVASMPKHMKISWNLMSSYLV 472


>gb|PPR84351.1| hypothetical protein GOBAR_AA36365 [Gossypium barbadense]
          Length = 481

 Score =  698 bits (1801), Expect = 0.0
 Identities = 351/483 (72%), Positives = 395/483 (81%), Gaps = 19/483 (3%)
 Frame = -3

Query: 1539 MWKNIFHQYKLFTARFYSRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPPF 1360
            M KN    + L  AR+YSRV+PPP A  + VIRVS+ N+A+LG PK GPKPRQLLSLPPF
Sbjct: 1    MQKNKLGHHLLSLARYYSRVAPPPPAYADPVIRVSN-NVAYLGSPKQGPKPRQLLSLPPF 59

Query: 1359 PDHPLPGKNLVSNTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMDD-----LDSNLTKE 1195
            P H LPGKN  +   VTAISW+KYYFDEI  S IQ+HFNKGLV ++       DS + ++
Sbjct: 60   PGHHLPGKNSATG-RVTAISWLKYYFDEISDSAIQSHFNKGLVKIESSNPNAADSFIERD 118

Query: 1194 GLTNPLRKIKHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKY 1015
            G    LRKIKHNEVM+VGARV+VPVS+AET++S+RFD IPSGTLHPNADEI+YL+RLVKY
Sbjct: 119  GQMKSLRKIKHNEVMEVGARVWVPVSIAETRVSRRFDCIPSGTLHPNADEIDYLRRLVKY 178

Query: 1014 K---------DSAIIVLNKPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRE 862
            K         D AI+VLNKPPKLPVKGSLPVHNSMD      LSYDYDEGPKLVHRLDRE
Sbjct: 179  KACVEFNCLLDYAILVLNKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRE 238

Query: 861  SSGILLMGRTKESISRLHWLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVI 682
            SSG+LLMGRTKESIS LHWLF+DI    SSC+AWNDA  A + RYW LVIG PKE EG+I
Sbjct: 239  SSGLLLMGRTKESISHLHWLFNDINPAKSSCKAWNDACDAKFQRYWALVIGTPKENEGLI 298

Query: 681  FAPLAKVLLNDGKTERVMLAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQI 502
             +PL+K+LL+DGKTERV+LA   GLE SQEAVTE+RVLGPMINGCSW+ELRP+TSRKHQ+
Sbjct: 299  RSPLSKILLDDGKTERVILAQNVGLEPSQEAVTEYRVLGPMINGCSWVELRPLTSRKHQL 358

Query: 501  RVHCAEALGTPIVGDYKYGWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSK 322
            RVHCAEALGTPIVGDYKYGWFVHR+WKQMPRVD EP TGKPYK+RRPEGLDVQKGSVLSK
Sbjct: 359  RVHCAEALGTPIVGDYKYGWFVHRQWKQMPRVDIEPRTGKPYKLRRPEGLDVQKGSVLSK 418

Query: 321  VPLLHLHCRELVLPNIAKFIGPYNKNIEH-----NSKPDLLRFVASMPSHMKISWNLMSS 157
            VPL+HLHCRELVLPNIAKF+   + N E      + KPDLLRFVASMP HMKISWNLMSS
Sbjct: 419  VPLVHLHCRELVLPNIAKFLPLLSNNAETLSPGLSGKPDLLRFVASMPKHMKISWNLMSS 478

Query: 156  YLV 148
            YLV
Sbjct: 479  YLV 481


>ref|XP_011074171.1| RNA pseudouridine synthase 3, mitochondrial isoform X1 [Sesamum
            indicum]
          Length = 475

 Score =  693 bits (1789), Expect = 0.0
 Identities = 343/457 (75%), Positives = 384/457 (84%), Gaps = 10/457 (2%)
 Frame = -3

Query: 1488 SRVSPPPRACDESVIRVSSSNIAHLGPPKDGPKPRQLLSLPPFPDHPLPGKNLVSNTHVT 1309
            S++ PPP A    VIRV++ NIAHLG PK+GPKPRQLLSLPPFP H LPG+   S  HVT
Sbjct: 20   SKIRPPPPASSPDVIRVTN-NIAHLGRPKEGPKPRQLLSLPPFPGHSLPGRKSTSAEHVT 78

Query: 1308 AISWMKYYFDEIPGSVIQTHFNKGLVHMDDLDSNLTK---EGLTNPLRKIKHNEVMKVGA 1138
            AISW+KYYFD+IP  +IQ+HFNKGLV M+ LDS       +G T+ +RK+KH++VM+VGA
Sbjct: 79   AISWLKYYFDDIPPPLIQSHFNKGLVQMESLDSRGPSGCHQGQTDSMRKLKHSDVMEVGA 138

Query: 1137 RVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKYKDSAIIVLNKPPKLPVKGS 958
            RVYVPVSVAE KISKRFD IPSGTL+PNADEIEYL+RLVKYKDSAI+VLNKPPKLPVKG+
Sbjct: 139  RVYVPVSVAECKISKRFDVIPSGTLYPNADEIEYLRRLVKYKDSAILVLNKPPKLPVKGN 198

Query: 957  LPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGRTKESISRLHWLFSDITKGN 778
            L VHNSMD      L+YDYDEGPKLVHRLDRESSG+LLMGR++ESIS L WLF+D  K  
Sbjct: 199  LSVHNSMDALAAAALTYDYDEGPKLVHRLDRESSGLLLMGRSRESISYLQWLFNDGRKAE 258

Query: 777  SSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLLNDGKTERVMLAHGSGLEAS 598
            S  E WNDA  A Y RYW LVIG PK+KEG+I  PL KVLLNDGKTERV+LAH S LEA+
Sbjct: 259  SLSEDWNDACEAMYQRYWALVIGLPKQKEGLICTPLTKVLLNDGKTERVVLAHNSCLEAA 318

Query: 597  QEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALGTPIVGDYKYGWFVHRKWKQ 418
            QEA+TE+RVLGP INGCSWIELRP T RKHQ+RVHCAEALGTPIVGDYKYGWFVH++WKQ
Sbjct: 319  QEAITEYRVLGPTINGCSWIELRPHTRRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQ 378

Query: 417  MPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFI-------G 259
            MPRVDFEPTTG+PYK+RRPEGLDVQKGSVLSKVPLLHLHCRE+VLPNIAKFI       G
Sbjct: 379  MPRVDFEPTTGEPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFIVLHKQQLG 438

Query: 258  PYNKNIEHNSKPDLLRFVASMPSHMKISWNLMSSYLV 148
             Y  N EH+ KPD+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 439  GYRVNPEHDLKPDVLRFVAPMPSHMKISWNLMSSYLV 475


>ref|XP_017215734.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1
            [Daucus carota subsp. sativus]
          Length = 479

 Score =  693 bits (1788), Expect = 0.0
 Identities = 355/467 (76%), Positives = 394/467 (84%), Gaps = 17/467 (3%)
 Frame = -3

Query: 1497 RFYSRVSPPPRAC---DESVIRVS-SSNIAHLGPP-KDGPKPRQLLSLPPFP-DHPLPGK 1336
            R+YSR+S PPR C     +V+RVS  +NIAHLGPP K+  KPRQLLSLPPFP +H LP  
Sbjct: 16   RYYSRISIPPRNCTPKSHTVVRVSPKTNIAHLGPPPKNEYKPRQLLSLPPFPCNHQLPS- 74

Query: 1335 NLVSNTHVTAISWMKYYFDEIPGSVIQTHFNKGLVHMDDLDSN----LTKEGLTNPLRKI 1168
              + ++ VTAI WMK+YF +I   VIQ+HFNKGLVH+DD + +    L  +G T+ LRKI
Sbjct: 75   --LLSSRVTAIMWMKFYFQDIEAPVIQSHFNKGLVHIDDDNRSDEISLYSQGKTDHLRKI 132

Query: 1167 KHNEVMKVGARVYVPVSVAETKISKRFDSIPSGTLHPNADEIEYLQRLVKYKDSAIIVLN 988
            KH+EVMK GAR+YVPVSVAET+IS RF+SIP+GTL+PNADEIEYLQRLVKYKDSAIIVLN
Sbjct: 133  KHSEVMKTGARIYVPVSVAETRISNRFNSIPTGTLYPNADEIEYLQRLVKYKDSAIIVLN 192

Query: 987  KPPKLPVKGSLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGILLMGRTKESISRLH 808
            KPPKLPVKG+LPVHNSMD      LSYDYDEGPKLVHRLDRESSGI LMGRTKESI+ L 
Sbjct: 193  KPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGIHLMGRTKESIAHLQ 252

Query: 807  WLFSDITKGNSSCEAWNDARRATYLRYWVLVIGAPKEKEGVIFAPLAKVLLNDGKTERVM 628
            WLFS I KG SS +AWNDA  ATY +YW LVIG+PKEKEG+I APL KVLLNDGKTERV+
Sbjct: 253  WLFSSIPKGKSSDKAWNDACHATYQKYWALVIGSPKEKEGLIRAPLTKVLLNDGKTERVI 312

Query: 627  LAHGSGLEASQEAVTEFRVLGPMINGCSWIELRPITSRKHQIRVHCAEALGTPIVGDYKY 448
            LAHGSGLEASQEAVTE+RVLGPMINGCSWIEL P+TSRK QIRVHCAEALGTPIVGDYKY
Sbjct: 313  LAHGSGLEASQEAVTEYRVLGPMINGCSWIELLPLTSRKDQIRVHCAEALGTPIVGDYKY 372

Query: 447  GWFVHRKWKQMPRVDFEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAK 268
            GWF HR+WKQMPRVDFEPT+GKPYKMRRP+GLDVQKGSVLSKVPLLH+HCRELVLPNIAK
Sbjct: 373  GWFTHRRWKQMPRVDFEPTSGKPYKMRRPDGLDVQKGSVLSKVPLLHMHCRELVLPNIAK 432

Query: 267  FIGPYNKNIE-------HNSKPDLLRFVASMPSHMKISWNLMSSYLV 148
            FI  +  + E        NSKPDLLRFV SMPSHMKISWNLMSSYLV
Sbjct: 433  FIQLHKNSSEKKHKPRDSNSKPDLLRFVVSMPSHMKISWNLMSSYLV 479